A Taxonomic Revision of Desmodesmus Serie Desmodesmus (Sphaeropleales, Scenedesmaceae)
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Colony Formation in Three Species of the Family Scenedesmaceae
Colony formation in three species of the family Scenedesmaceae (Desmodesmus subspicatus, Scenedesmus acutus, Tetradesmus dimorphus) exposed to sodium dodecyl sulfate and its interference with grazing of Daphnia galeata Yusuke Oda ( [email protected] ) Shinshu University https://orcid.org/0000-0002-6555-1335 Masaki Sakamoto Toyama Prefectural University Yuichi Miyabara Shinshu University Research Article Keywords: Sodium dodecyl sulfate, Info-disruption, Colony formation, Scenedesmaceae, Daphnia Posted Date: March 30th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-346616/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License 1 Colony formation in three species of the family Scenedesmaceae (Desmodesmus subspicatus, 2 Scenedesmus acutus, Tetradesmus dimorphus) exposed to sodium dodecyl sulfate and its interference 3 with grazing of Daphnia galeata 4 5 Yusuke Oda*,1, Masaki Sakamoto2, Yuichi Miyabara3,4 6 7 1Department of Science and Technology, Shinshu University, Suwa, Nagano, Japan 8 2Department of Environmental and Civil Engineering, Toyama Prefectural University, Imizu, Toyama, 9 Japan 10 3Suwa Hydrobiological Station, Faculty of Science, Shinshu University, Suwa, Nagano, Japan 11 4Institute of Mountain Science, Shinshu University, Suwa, Nagano, Japan 12 13 *Corresponding author: Y. O da 14 15 Y. O d a 16 Phone: +81-90-9447-9029 17 Email: [email protected] 18 ORCID: 0000-0002-6555-1335 19 20 21 22 23 Acknowledgments 24 This study was supported by a Grant-in-Aid for Japan Society for the Promotion of Sciences (JSPS) 25 Fellows (Grant No. JP20J11681). We thank Natalie Kim, PhD, from Edanz Group (https://en-author- 26 services.edanz.com/ac) for editing a draft of this manuscript. -
Pediastrum Species (Hydrodictyaceae, Sphaeropleales) in Phytoplankton of Sumin Lake (£Êczna-W£Odawa Lakeland)
Vol. 73, No. 1: 39-46, 2004 ACTA SOCIETATIS BOTANICORUM POLONIAE 39 PEDIASTRUM SPECIES (HYDRODICTYACEAE, SPHAEROPLEALES) IN PHYTOPLANKTON OF SUMIN LAKE (£ÊCZNA-W£ODAWA LAKELAND) AGNIESZKA PASZTALENIEC, MA£GORZATA PONIEWOZIK Department of Botany and Hydrobiology, Catholic University of Lublin C.K. Norwida 4, 20-061 Lublin, Poland e-mail: [email protected] (Received: April 7, 2003. Accepted: July 18, 2003) ABSTRACT During studies of phytoplankton in Sumin Lake (£êczna-W³odawa Lakeland), conducted from May till Sep- tember 2001 and 2002, 15 taxa of the genus Pediastrum (Hydrodictyaceae, Sphaeropleales) were found. Among them there were common species as Pediastrum boryanum, P. duplex, P. tetras and P. simplex, but also rare spe- cies as P. integrum or P. kawraiskyi. An especially interesting species was P. orientale, the taxon that until now has not been noted in phytoplankton of Polish water bodies. The paper gives descriptions of the genus Pediastrum coenobia and physico-chemical conditions of the habitat. The original documentation of Pediastrum taxa is added. KEY WORDS: Pediastrum taxa, Chlorophyta, phytoplankton, £êczna-W³odawa Lakeland. INRTODUCTION rved in palynological preparations (Jankovská and Komá- rek 2000, Komárek and Jankovská 2001; Nielsen and Lakes of £êczna-W³odawa Lakeland are the only group Sørensen 1992). in Poland located beyond the limits of a continental glacier The taxonomical research of the genus Pediastrum was of the last glaciation. The genesis of lakes is still disputa- not conducted in phytoplankton of £êczna-W³odawa Lake- ble, but the most of them have a termo-karst origin (Hara- land lakes. Only some information on occurrence of this simiuk and Wojtanowicz 1998). -
The Plankton Lifeform Extraction Tool: a Digital Tool to Increase The
Discussions https://doi.org/10.5194/essd-2021-171 Earth System Preprint. Discussion started: 21 July 2021 Science c Author(s) 2021. CC BY 4.0 License. Open Access Open Data The Plankton Lifeform Extraction Tool: A digital tool to increase the discoverability and usability of plankton time-series data Clare Ostle1*, Kevin Paxman1, Carolyn A. Graves2, Mathew Arnold1, Felipe Artigas3, Angus Atkinson4, Anaïs Aubert5, Malcolm Baptie6, Beth Bear7, Jacob Bedford8, Michael Best9, Eileen 5 Bresnan10, Rachel Brittain1, Derek Broughton1, Alexandre Budria5,11, Kathryn Cook12, Michelle Devlin7, George Graham1, Nick Halliday1, Pierre Hélaouët1, Marie Johansen13, David G. Johns1, Dan Lear1, Margarita Machairopoulou10, April McKinney14, Adam Mellor14, Alex Milligan7, Sophie Pitois7, Isabelle Rombouts5, Cordula Scherer15, Paul Tett16, Claire Widdicombe4, and Abigail McQuatters-Gollop8 1 10 The Marine Biological Association (MBA), The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK. 2 Centre for Environment Fisheries and Aquacu∑lture Science (Cefas), Weymouth, UK. 3 Université du Littoral Côte d’Opale, Université de Lille, CNRS UMR 8187 LOG, Laboratoire d’Océanologie et de Géosciences, Wimereux, France. 4 Plymouth Marine Laboratory, Prospect Place, Plymouth, PL1 3DH, UK. 5 15 Muséum National d’Histoire Naturelle (MNHN), CRESCO, 38 UMS Patrinat, Dinard, France. 6 Scottish Environment Protection Agency, Angus Smith Building, Maxim 6, Parklands Avenue, Eurocentral, Holytown, North Lanarkshire ML1 4WQ, UK. 7 Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK. 8 Marine Conservation Research Group, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK. 9 20 The Environment Agency, Kingfisher House, Goldhay Way, Peterborough, PE4 6HL, UK. 10 Marine Scotland Science, Marine Laboratory, 375 Victoria Road, Aberdeen, AB11 9DB, UK. -
Isolation and Evaluation of Microalgae Strains from the Northern Territory
Isolation and evaluation of microalgae strains from The Northern Territory and Queensland - Australia that have adapted to accumulate triacylglycerides and protein as storage Van Thang Duong Master of Environmental Sciences A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2016 School of Agriculture and Food Sciences Abstract Biodiesel and high-value products from microalgae are researched in many countries. Compared to first generation biofuel crops, advantages of microalgae do not only lead to economic benefits but also to better environmental outcomes. For instance, growth rate and productivity of microalgae are higher than other feedstocks from plant crops. In addition, microalgae grow in a wide range of environmental conditions such as fresh, brackish, saline and even waste water and do not need to compete for arable land or biodiverse landscapes. Microalgae absorb CO2 and sunlight from the atmosphere and convert these into chemical energy and biomass. Thus, the removal of CO2 from the atmosphere plays a very important role in global warming mitigation, as the produced biofuel would replace an equivalent amount of fossil fuel. Based on their high protein contents and rapid growth rates, microalgae are also highly sought after for their potential as a high-protein containing feedstock for animal feed and human consumption. However, despite the promising characteristics of microalgae as a feedstock for feed and fuel, their stable cultivation is still difficult and expensive, as mono-species microalgae can often get contaminated with other algae and grazers. To address this issue I hypothesized that indigenous strains have a highly adaptive capacity to local environments and climatic conditions and therefore may provide good growth rates in the same geographic and climatic locations where they have been collected from. -
Permian–Triassic Non-Marine Algae of Gondwana—Distributions
Earth-Science Reviews 212 (2021) 103382 Contents lists available at ScienceDirect Earth-Science Reviews journal homepage: www.elsevier.com/locate/earscirev Review Article Permian–Triassic non-marine algae of Gondwana—Distributions, natural T affinities and ecological implications ⁎ Chris Maysa,b, , Vivi Vajdaa, Stephen McLoughlina a Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden b Monash University, School of Earth, Atmosphere and Environment, 9 Rainforest Walk, Clayton, VIC 3800, Australia ARTICLE INFO ABSTRACT Keywords: The abundance, diversity and extinction of non-marine algae are controlled by changes in the physical and Permian–Triassic chemical environment and community structure of continental ecosystems. We review a range of non-marine algae algae commonly found within the Permian and Triassic strata of Gondwana and highlight and discuss the non- mass extinctions marine algal abundance anomalies recorded in the immediate aftermath of the end-Permian extinction interval Gondwana (EPE; 252 Ma). We further review and contrast the marine and continental algal records of the global biotic freshwater ecology crises within the Permian–Triassic interval. Specifically, we provide a case study of 17 species (in 13 genera) palaeobiogeography from the succession spanning the EPE in the Sydney Basin, eastern Australia. The affinities and ecological im- plications of these fossil-genera are summarised, and their global Permian–Triassic palaeogeographic and stra- tigraphic distributions are collated. Most of these fossil taxa have close extant algal relatives that are most common in freshwater, brackish or terrestrial conditions, and all have recognizable affinities to groups known to produce chemically stable biopolymers that favour their preservation over long geological intervals. -
Taxonomy and Diversity of Genus Pediastrum Meyen (Chlorophyceae, Algae) in East Nepal
S.K. Rai and P.K.Our NatureMisra / (2012) Our Nature 10: 16 (2012)7-175 10: 167-175 Taxonomy and Diversity of Genus Pediastrum Meyen (Chlorophyceae, Algae) in East Nepal S.K. Rai1* and P.K. Misra2 1Department of Botany, Post Graduate Campus, T.U., Biratnagar, Nepal 2Phycology Research Laboratory, Department of Botany, University of Lucknow, India *E-mail: [email protected] Abstract Pediastrum Meyen is a green algae occurs frequently in lentic environment like pond, puddles, lakes etc. mostly in warm and humid terai region. Twenty taxa of Pediasturm have been reported from Nepal, mostly from central and western part of the country, hitherto. Among them, in the present study, ten taxa of Pediastrum are enumerated also from east Nepal. Taxonomy and diversity of each taxa have been described with photomicrography. Key words: Algae, Chlorophyceae, Pediastrum, Taxonomy, Nepal Introduction Green algae are aquatic plants and act as the combined with silicon oxide which makes pioneer photosynthetic organism or them high resistance to decay. Therefore, producer in the World of ecosystem. The they remain preserved well in lake genus Pediastrum Mayen (Chlorophyceae, sediments as fossil record for palynological Sphaeropleales) is a free floating, coenobial, studies (Komárek and Jankovská, 2001). green algae occurs commonly in natural Thus, the knowledge of Pediastrum can be freshwater lentic environments like ponds, useful for the determination of trophocity or lakes, reservoirs etc. Their occurrence in salinity of water at present and past brackish and salty waters is rare (Parra, (Pasztaleniec and Poniewozik, 2004). 1979). At present, only 24 species of Study on algal flora of Nepal is Pediastrum have been described from the incomplete and sporadic. -
The Draft Genome of Hariotina Reticulata (Sphaeropleales
Protist, Vol. 170, 125684, December 2019 http://www.elsevier.de/protis Published online date 19 October 2019 ORIGINAL PAPER Protist Genome Reports The Draft Genome of Hariotina reticulata (Sphaeropleales, Chlorophyta) Provides Insight into the Evolution of Scenedesmaceae a,b,2 c,d,2 b e f Yan Xu , Linzhou Li , Hongping Liang , Barbara Melkonian , Maike Lorenz , f g a,g e,1 a,g,1 Thomas Friedl , Morten Petersen , Huan Liu , Michael Melkonian , and Sibo Wang a BGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China b BGI Education Center, University of Chinese Academy of Sciences, Beijing, China c China National GeneBank, BGI-Shenzhen, Jinsha Road, Shenzhen 518120, China d Department of Biotechnology and Biomedicine, Technical University of Denmark, Copenhagen, Denmark e University of Duisburg-Essen, Campus Essen, Faculty of Biology, Universitätsstr. 5, 45141 Essen, Germany f Department ‘Experimentelle Phykologie und Sammlung von Algenkulturen’ (EPSAG), University of Göttingen, Nikolausberger Weg 18, 37073 Göttingen, Germany g Department of Biology, University of Copenhagen, Copenhagen, Denmark Submitted October 9, 2019; Accepted October 13, 2019 Hariotina reticulata P. A. Dangeard 1889 (Sphaeropleales, Chlorophyta) is a common member of the summer phytoplankton of meso- to highly eutrophic water bodies with a worldwide distribution. Here, we report the draft whole-genome shotgun sequencing of H. reticulata strain SAG 8.81. The final assembly comprises 107,596,510 bp with over 15,219 scaffolds (>100 bp). This whole-genome project is publicly available in the CNSA (https://db.cngb.org/cnsa/) of CNGBdb under the accession number CNP0000705. © 2019 Elsevier GmbH. All rights reserved. Key words: Scenedesmaceae; genome; algae; comparative genomics. -
Biodiversity of Microscopic Green Algae from Desert Soil Crusts
Digital Commons @ Assumption University Honors Theses Honors Program 2020 Biodiversity of Microscopic Green Algae from Desert Soil Crusts Victoria Williamson Assumption College Follow this and additional works at: https://digitalcommons.assumption.edu/honorstheses Part of the Life Sciences Commons Recommended Citation Williamson, Victoria, "Biodiversity of Microscopic Green Algae from Desert Soil Crusts" (2020). Honors Theses. 69. https://digitalcommons.assumption.edu/honorstheses/69 This Honors Thesis is brought to you for free and open access by the Honors Program at Digital Commons @ Assumption University. It has been accepted for inclusion in Honors Theses by an authorized administrator of Digital Commons @ Assumption University. For more information, please contact [email protected]. BIODIVERSITY OF MICROSCOPIC GREEN ALGAE FROM DESERT SOIL CRUSTS Victoria Williamson Faculty Supervisor: Karolina Fučíková Natural Science Department A Thesis Submitted to Fulfill the Requirements of the Honors Program at Assumption College Spring 2020 Williamson 1 Abstract In the desert ecosystem, the ground is covered with soil crusts. Several organisms exist here, such as cyanobacteria, lichens, mosses, fungi, bacteria, and green algae. This most superficial layer of the soil contains several primary producers of the food web in this ecosystem, which stabilize the soil, facilitate plant growth, protect from water and wind erosion, and provide water filtration and nitrogen fixation. Researching the biodiversity of green algae in the soil crusts can provide more context about the importance of the soil crusts. Little is known about the species of green algae that live there, and through DNA-based phylogeny and microscopy, more can be understood. In this study, DNA was extracted from algal cultures newly isolated from desert soil crusts in New Mexico and California. -
The Draft Genome of the Small, Spineless Green Alga
Protist, Vol. 170, 125697, December 2019 http://www.elsevier.de/protis Published online date 25 October 2019 ORIGINAL PAPER Protist Genome Reports The Draft Genome of the Small, Spineless Green Alga Desmodesmus costato-granulatus (Sphaeropleales, Chlorophyta) a,b,2 a,c,2 d,e f g Sibo Wang , Linzhou Li , Yan Xu , Barbara Melkonian , Maike Lorenz , g b a,e f,1 Thomas Friedl , Morten Petersen , Sunil Kumar Sahu , Michael Melkonian , and a,b,1 Huan Liu a BGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China b Department of Biology, University of Copenhagen, Copenhagen, Denmark c Department of Biotechnology and Biomedicine, Technical University of Denmark, Copenhagen, Denmark d BGI Education Center, University of Chinese Academy of Sciences, Beijing, China e State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, Shenzhen 518083, China f University of Duisburg-Essen, Campus Essen, Faculty of Biology, Universitätsstr. 2, 45141 Essen, Germany g Department ‘Experimentelle Phykologie und Sammlung von Algenkulturen’, University of Göttingen, Nikolausberger Weg 18, 37073 Göttingen, Germany Submitted October 9, 2019; Accepted October 21, 2019 Desmodesmus costato-granulatus (Skuja) Hegewald 2000 (Sphaeropleales, Chlorophyta) is a small, spineless green alga that is abundant in the freshwater phytoplankton of oligo- to eutrophic waters worldwide. It has a high lipid content and is considered for sustainable production of diverse compounds, including biofuels. Here, we report the draft whole-genome shotgun sequencing of D. costato-granulatus strain SAG 18.81. The final assembly comprises 48,879,637 bp with over 4,141 scaffolds. This whole-genome project is publicly available in the CNSA (https://db.cngb.org/cnsa/) of CNGBdb under the accession number CNP0000701. -
Distribution and Ecological Habitat of Scenedesmus and Related Genera in Some Freshwater Resources of Northern and North-Eastern Thailand
BIODIVERSITAS ISSN: 1412-033X Volume 18, Number 3, July 2017 E-ISSN: 2085-4722 Pages: 1092-1099 DOI: 10.13057/biodiv/d180329 Distribution and ecological habitat of Scenedesmus and related genera in some freshwater resources of Northern and North-Eastern Thailand KITTIYA PHINYO1,♥, JEERAPORN PEKKOH1,2, YUWADEE PEERAPORNPISAL1,♥♥ 1Department of Biology, Faculty of Science, Chiang Mai University. Chiang Mai 50200, Thailand. Tel. +66-53-94-3346, Fax. +66-53-89-2259, ♥email: [email protected], ♥♥ [email protected] 2Science and Technology Research Institute, Faculty of Science, Chiang Mai University. Chiang Mai 50200, Thailand Manuscript received: 12 April 2017. Revision accepted: 21 June 2017. Abstract. Phinyo K, Pekkoh J, Peerapornpisal Y. 2017. Distribution and ecological habitat of Scenedesmus and related genera in some freshwater resources of Northern and North-Eastern Thailand. Biodiversitas 18: 1092-1099. The family Scenedesmaceae is made up of freshwater green microalgae that are commonly found in bodies of freshwater, particularly in water of moderate to polluted water quality. However, as of yet, there have not been any studies on the diversity of this family in Thailand and in similar regions of tropical areas. Therefore, this research study aims to investigate the richness, distribution and ecological conditions of the species of the Scenedesmus and related genera through the assessment of water quality. The assessment of water quality was based on the physical and chemical parameters at 50 sampling sites. A total of 35 taxa were identified that were composed of six genera, i.e. Acutodesmus, Comasiella, Desmodesmus, Pectinodesmus, Scenedesmus and Verrucodesmus. Eleven taxa were newly recorded in Thailand. -
2016 National Algal Biofuels Technology Review
National Algal Biofuels Technology Review Bioenergy Technologies Office June 2016 National Algal Biofuels Technology Review U.S. Department of Energy Office of Energy Efficiency and Renewable Energy Bioenergy Technologies Office June 2016 Review Editors: Amanda Barry,1,5 Alexis Wolfe,2 Christine English,3,5 Colleen Ruddick,4 and Devinn Lambert5 2010 National Algal Biofuels Technology Roadmap: eere.energy.gov/bioenergy/pdfs/algal_biofuels_roadmap.pdf A complete list of roadmap and review contributors is available in the appendix. Suggested Citation for this Review: DOE (U.S. Department of Energy). 2016. National Algal Biofuels Technology Review. U.S. Department of Energy, Office of Energy Efficiency and Renewable Energy, Bioenergy Technologies Office. Visit bioenergy.energy.gov for more information. 1 Los Alamos National Laboratory 2 Oak Ridge Institute for Science and Education 3 National Renewable Energy Laboratory 4 BCS, Incorporated 5 Bioenergy Technologies Office This report is being disseminated by the U.S. Department of Energy. As such, the document was prepared in compliance with Section 515 of the Treasury and General Government Appropriations Act for Fiscal Year 2001 (Public Law No. 106-554) and information quality guidelines issued by the Department of Energy. Further, this report could be “influential scientific information” as that term is defined in the Office of Management and Budget’s Information Quality Bulletin for Peer Review (Bulletin). This report has been peer reviewed pursuant to section II.2 of the Bulletin. Cover photo courtesy of Qualitas Health, Inc. BIOENERGY TECHNOLOGIES OFFICE Preface Thank you for your interest in the U.S. Department of Energy (DOE) Bioenergy Technologies Office’s (BETO’s) National Algal Biofuels Technology Review. -
Table of Contents
Table of Contents General Program………………………………………….. 2 – 5 Poster Presentation Summary……………………………. 6 – 8 Abstracts (in order of presentation)………………………. 9 – 41 Brief Biography, Dr. Dennis Hanisak …………………… 42 1 General Program: 46th Northeast Algal Symposium Friday, April 20, 2007 5:00 – 7:00pm Registration Saturday, April 21, 2007 7:00 – 8:30am Continental Breakfast & Registration 8:30 – 8:45am Welcome and Opening Remarks – Morgan Vis SESSION 1 Student Presentations Moderator: Don Cheney 8:45 – 9:00am Wilce Award Candidate FUSION, DUPLICATION, AND DELETION: EVOLUTION OF EUGLENA GRACILIS LHC POLYPROTEIN-CODING GENES. Adam G. Koziol and Dion G. Durnford. (Abstract p. 9) 9:00 – 9:15am Wilce Award Candidate UTILIZING AN INTEGRATIVE TAXONOMIC APPROACH OF MOLECULAR AND MORPHOLOGICAL CHARACTERS TO DELIMIT SPECIES IN THE RED ALGAL FAMILY KALLYMENIACEAE (RHODOPHYTA). Bridgette Clarkston and Gary W. Saunders. (Abstract p. 9) 9:15 – 9:30am Wilce Award Candidate AFFINITIES OF SOME ANOMALOUS MEMBERS OF THE ACROCHAETIALES. Susan Clayden and Gary W. Saunders. (Abstract p. 10) 9:30 – 9:45am Wilce Award Candidate BARCODING BROWN ALGAE: HOW DNA BARCODING IS CHANGING OUR VIEW OF THE PHAEOPHYCEAE IN CANADA. Daniel McDevit and Gary W. Saunders. (Abstract p. 10) 9:45 – 10:00am Wilce Award Candidate CCMP622 UNID. SP.—A CHLORARACHNIOPHTYE ALGA WITH A ‘LARGE’ NUCLEOMORPH GENOME. Tia D. Silver and John M. Archibald. (Abstract p. 11) 10:00 – 10:15am Wilce Award Candidate PRELIMINARY INVESTIGATION OF THE NUCLEOMORPH GENOME OF THE SECONDARILY NON-PHOTOSYNTHETIC CRYPTOMONAD CRYPTOMONAS PARAMECIUM CCAP977/2A. Natalie Donaher, Christopher Lane and John Archibald. (Abstract p. 11) 10:15 – 10:45am Break 2 SESSION 2 Student Presentations Moderator: Hilary McManus 10:45 – 11:00am Wilce Award Candidate IMPACTS OF HABITAT-MODIFYING INVASIVE MACROALGAE ON EPIPHYTIC ALGAL COMMUNTIES.