Polyporales) from Southern Spain
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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Hyphal Pegs Rijksherbarium, Leiden Cunn.). Mycobonia Type Species of the Mycobonia Was Originally Published Jamaica. Later Berke
PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 8, 4, pp. 447-458 (1976) Studies in hydnoid fungi-I. On with some genera hyphal pegs W. Jülich Rijksherbarium, Leiden (With six Text-figures) and described. Mycobonia flava Epithele typhae are Two new genera are introduced, viz. Mycothele (for Mycobonia disciformis Cunn.) and Epithelopsis (for Epithele fulva Cunn.). On Mycobonia When Patouillard established the he based it (1892) genus Bonia, on a resupinate species, B. papyrina, from Tonkin. In the same publication (p. 49) he remarked that doit ‘Hydnum flavum Berk, etre rapporte au genre Bonia’. Later he found this generic name to be preoccupied by Bonia Balansa (1890, Gramineae) and placed (1894) his B. papyrina in the synonymy of Heterochaete tenuicola (Lev.) Pat. which according is to Bodman (1952) a synonym of Heterochaete delicata (Klotzsch ex Berk.) Pat. In the Patouillardestablished based same year (1894), a new genus, Mycobonia, on Hydnum Some Banker created the Grandinioides for the flavum. years later, ( 1906) genus same maintained species, whereas the generic name Bonia Pat. was by Hennings (1898: 123) in the first editionofEngler/Prantl, Natiirl. PflFamilien, as well as by Killermann (1928: 140) in the second edition of the same work. is Hirneola Fr. introduced Another genus, also typified by Hydnum flavum, 1825, as In Fries used the this a monotypic genus. 1848, once more generic name Hirneola, time for species belonging to the Auriculariales. To avoid confusion and to save the Hirneola Fr. Donk conservation of genus 1848, (1941) proposed Mycobonia against Hirneola Fr. 1825. This proposal was adopted in 1953, leaving Mycobonia the correct generic name for Hydnum flavum. -
A Checklist of Clavarioid Fungi (Agaricomycetes) Recorded in Brazil
A checklist of clavarioid fungi (Agaricomycetes) recorded in Brazil ANGELINA DE MEIRAS-OTTONI*, LIDIA SILVA ARAUJO-NETA & TATIANA BAPTISTA GIBERTONI Departamento de Micologia, Universidade Federal de Pernambuco, Av. Nelson Chaves s/n, Recife 50670-420 Brazil *CORRESPONDENCE TO: [email protected] ABSTRACT — Based on an intensive search of literature about clavarioid fungi (Agaricomycetes: Basidiomycota) in Brazil and revision of material deposited in Herbaria PACA and URM, a list of 195 taxa was compiled. These are distributed into six orders (Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales) and 12 families (Aphelariaceae, Auriscalpiaceae, Clavariaceae, Clavulinaceae, Gomphaceae, Hymenochaetaceae, Lachnocladiaceae, Lentariaceae, Lepidostromataceae, Physalacriaceae, Pterulaceae, and Typhulaceae). Among the 22 Brazilian states with occurrence of clavarioid fungi, Rio Grande do Sul, Paraná and Amazonas have the higher number of species, but most of them are represented by a single record, which reinforces the need of more inventories and taxonomic studies about the group. KEY WORDS — diversity, taxonomy, tropical forest Introduction The clavarioid fungi are a polyphyletic group, characterized by coralloid, simple or branched basidiomata, with variable color and consistency. They include 30 genera with about 800 species, distributed in Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales (Corner 1970; Petersen 1988; Kirk et al. 2008). These fungi are usually humicolous or lignicolous, but some can be symbionts – ectomycorrhizal, lichens or pathogens, being found in temperate, subtropical and tropical forests (Corner 1950, 1970; Petersen 1988; Nelsen et al. 2007; Henkel et al. 2012). Some species are edible, while some are poisonous (Toledo & Petersen 1989; Henkel et al. 2005, 2011). Studies about clavarioid fungi in Brazil are still scarce (Fidalgo & Fidalgo 1970; Rick 1959; De Lamônica-Freire 1979; Sulzbacher et al. -
Re-Thinking the Classification of Corticioid Fungi
mycological research 111 (2007) 1040–1063 journal homepage: www.elsevier.com/locate/mycres Re-thinking the classification of corticioid fungi Karl-Henrik LARSSON Go¨teborg University, Department of Plant and Environmental Sciences, Box 461, SE 405 30 Go¨teborg, Sweden article info abstract Article history: Corticioid fungi are basidiomycetes with effused basidiomata, a smooth, merulioid or Received 30 November 2005 hydnoid hymenophore, and holobasidia. These fungi used to be classified as a single Received in revised form family, Corticiaceae, but molecular phylogenetic analyses have shown that corticioid fungi 29 June 2007 are distributed among all major clades within Agaricomycetes. There is a relative consensus Accepted 7 August 2007 concerning the higher order classification of basidiomycetes down to order. This paper Published online 16 August 2007 presents a phylogenetic classification for corticioid fungi at the family level. Fifty putative Corresponding Editor: families were identified from published phylogenies and preliminary analyses of unpub- Scott LaGreca lished sequence data. A dataset with 178 terminal taxa was compiled and subjected to phy- logenetic analyses using MP and Bayesian inference. From the analyses, 41 strongly Keywords: supported and three unsupported clades were identified. These clades are treated as fam- Agaricomycetes ilies in a Linnean hierarchical classification and each family is briefly described. Three ad- Basidiomycota ditional families not covered by the phylogenetic analyses are also included in the Molecular systematics classification. All accepted corticioid genera are either referred to one of the families or Phylogeny listed as incertae sedis. Taxonomy ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Introduction develop a downward-facing basidioma. -
<I>Dendrophysellum</I>
ISSN (print) 0093-4666 © 2015. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/130.369 Volume 130, pp. 369–397 April–June 2015 Taxonomic studies in Chrysoderma, Corneromyces, Dendrophysellum, Hyphoradulum, and Mycobonia Karen K. Nakasone* Center for Forest Mycology Research, U.S. Forest Service One Gifford Pinchot Drive, Madison, WI 53726 USA *Correspondence to: [email protected] Abstract — Eight poorly known or unusual crustose and pileate basidiomycete species were studied. These included the type specimens of three monotypic genera: Chrysoderma alboluteum from Réunion is conspecific with Cerocorticium molle; Dendrophysellum amurense from the Russian Far East is a species of Vararia; and Hyphoradulum conspicuum belongs in Pseudolagarobasidium and is the first representative of the genus from Europe. Corticium murrillii, from Mexico, is congeneric with Corneromyces kinabalui. New combinations Vararia amurensis, Pseudolagarobasidium conspicuum, and Corneromyces murrillii are proposed. Mycobonia flava and M. brunneoleuca are macroscopically similar species with diagnostically distinct basidiospore shape and size. Mycobonia disciformis is accepted in Mycothele, and Mycobonia winkleri represents a species of unknown affinities. Recent molecular phylogenetic studies indicate that Mycobonia is embedded in Polyporus sensu stricto and is a synonym of Polyporus. Transferring M. brunneoleuca and M. flava to Polyporus requires the creation of the replacement names, P. polyacanthophorus and P. epitheloides. Key words — Amylocorticiales, cyanophilous basidiospores, Epithele, Favolus curtipes, Polyporales Introduction Tremendous advances in the systematics of basidiomycetes have been made in the last twenty years since the advent of molecular phylogenetics. Nevertheless, morphological studies are still essential to advance this discipline. In this paper, eight species of poorly known crustose or pileate basidiomycetes are described and illustrated. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Molecular Phylogeny of Polyporales from Bafut Forest, Cameroon and Their Importance to Rural Communities
Journal of Biology and Life Science ISSN 2157-6076 2019, Vol. 10, No. 2 Molecular Phylogeny of Polyporales from Bafut Forest, Cameroon and Their Importance to Rural Communities Tonjock Rosemary Kinge (Corresponding author) Department of Biological Sciences, Faculty of Science, The University of Bamenda, P.O. Box 39, Bambili, North West Region, Cameroon Email: [email protected] Azinue Clementine Lem Department of Biological Sciences, Faculty of Science, The University of Bamenda, P.O. Box 39, Bambili, North West Region, Cameroon Email: [email protected] Seino Richard Akwanjoh Department of Biological Sciences, Faculty of Science, The University of Bamenda, P.O. Box 39, Bambili, North West Region, Cameroon Email: [email protected] Received: January 9, 2019 Accepted: January 26, 2019 doi:10.5296/jbls.v10i2.14339 URL: https://doi.org/10.5296/jbls.v10i2.14339 Abstract The polyporales are a large order of pore fungi within the Basidiomycota (Kingdom Fungi). They are mostly found on decay wood with some edible and medicinal species and others causing diseases of trees. In Cameroon, the knowledge on the phylogeny of polyporales is limited, their historical uses as food, medicine, source of income and the sociological impacts are apparently threatened due to slow ethnomycology research drive. The aim of this study was to identify and determine the phylogenetic relationship of polyporales in the Bafut forest and document its uses to the local communities. DNA was extracted using CTAB method and amplified using primers ITS 1 and ITS4. Their identities were determined in GeneBank using BLAST and a phylogenetic analysis was done using MEGA version 7. -
A Revised Family-Level Classification of the Polyporales (Basidiomycota)
fungal biology 121 (2017) 798e824 journal homepage: www.elsevier.com/locate/funbio A revised family-level classification of the Polyporales (Basidiomycota) Alfredo JUSTOa,*, Otto MIETTINENb, Dimitrios FLOUDASc, € Beatriz ORTIZ-SANTANAd, Elisabet SJOKVISTe, Daniel LINDNERd, d €b f Karen NAKASONE , Tuomo NIEMELA , Karl-Henrik LARSSON , Leif RYVARDENg, David S. HIBBETTa aDepartment of Biology, Clark University, 950 Main St, Worcester, 01610, MA, USA bBotanical Museum, University of Helsinki, PO Box 7, 00014, Helsinki, Finland cDepartment of Biology, Microbial Ecology Group, Lund University, Ecology Building, SE-223 62, Lund, Sweden dCenter for Forest Mycology Research, US Forest Service, Northern Research Station, One Gifford Pinchot Drive, Madison, 53726, WI, USA eScotland’s Rural College, Edinburgh Campus, King’s Buildings, West Mains Road, Edinburgh, EH9 3JG, UK fNatural History Museum, University of Oslo, PO Box 1172, Blindern, NO 0318, Oslo, Norway gInstitute of Biological Sciences, University of Oslo, PO Box 1066, Blindern, N-0316, Oslo, Norway article info abstract Article history: Polyporales is strongly supported as a clade of Agaricomycetes, but the lack of a consensus Received 21 April 2017 higher-level classification within the group is a barrier to further taxonomic revision. We Accepted 30 May 2017 amplified nrLSU, nrITS, and rpb1 genes across the Polyporales, with a special focus on the Available online 16 June 2017 latter. We combined the new sequences with molecular data generated during the Poly- Corresponding Editor: PEET project and performed Maximum Likelihood and Bayesian phylogenetic analyses. Ursula Peintner Analyses of our final 3-gene dataset (292 Polyporales taxa) provide a phylogenetic overview of the order that we translate here into a formal family-level classification. -
Genera of Corticioid Fungi: Keys, Nomenclature and Taxonomy Article
Studies in Fungi 5(1): 125–309 (2020) www.studiesinfungi.org ISSN 2465-4973 Article Doi 10.5943/sif/5/1/12 Genera of corticioid fungi: keys, nomenclature and taxonomy Gorjón SP BIOCONS – Department of Botany and Plant Physiology, University of Salamanca, 37007 Salamanca, Spain Gorjón SP 2020 – Genera of corticioid fungi: keys, nomenclature, and taxonomy. Studies in Fungi 5(1), 125–309, Doi 10.5943/sif/5/1/12 Abstract A review of the worldwide corticioid homobasidiomycetes genera is presented. A total of 620 genera are considered with comments on their taxonomy and nomenclature. Of them, about 420 are accepted and keyed out, described in detail with remarks on their taxonomy and systematics. Key words – Corticiaceae – Crust fungi – Diversity – Homobasidiomycetes Introduction Corticioid fungi are a diverse and heterogeneous group of fungi mainly referred to basidiomycete fungi in which basidiomes are generally resupinate. Basidiome construction is often simple, and in most cases, only generative hyphae are found. In more structured basidiomes, those with a reflexed margin or with a pileate surface, more or less sclerified hyphae are usually found. Even the basidiome structure is apparently not very complex, hymenophore configuration should be highly variable finding smooth surfaces or different variations to increase the spore production area such as rugose, tuberculate, aculeate, merulioid, folded, or poroid hymenial surfaces. It is often thought that corticioid fungi produce unattractive and little variable forms and, in most cases, they go unnoticed by most mycologists as ungraceful forms that ‘cover sticks and look like a paint stain’. Although the macroscopic variability compared to other fungi is, but not always, usually limited, under the microscope they surprise with a great diversity of forms of basidia, cystidia, spores and other microscopic elements (Hjortstam et al. -
2017 Adamčík, Slavomír, Jančovičová, Soňa, Looney, Brian P, Adamčíková, Katarína, Birkebak, Joshua M, Moreau, Pierre-Arthur, Matheny, P Brandon
2017 Adamčík, Slavomír, Jančovičová, Soňa, Looney, Brian P, Adamčíková, Katarína, Birkebak, Joshua M, Moreau, Pierre-Arthur, Matheny, P Brandon. (2017). Circumscription of species in the Hodophilus foetens complex (Clavariaceae, Agaricales) in Europe. Mycological Progress, 16(1): 47–62. Antonelli, Alexandre, Hettling, Hannes, Condamine, Fabien L., Vos, Karin, Nilsson, R. Henrik, Sanderson, Michael J, Sauquet, Hervé, Scharn, Ruud, Silvestro, Daniele, Töpel, Mats H., Bacon, Christine D., Oxelman, Bengt & Vos, Rutger A (2017). Toward a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of Taxa. Systematic biology, 66(2: 152–166. Athanasiadis, Athanasios. (2017). A study of the original material of Lithothamnion engelhartii Foslie (Corallinales, Rhodophyta). Botanica Marina, 60(1): 67–78. Athanasiadis, A. (2017). Capensia fucorum (Esper) gen. et comb. nov. (Mesophyllaceae, Corallinales, Rhodophyta): a hemiparasite on Gelidium from South Africa. Botanica Marina. 60(5): 555–565. Boltenkov, Eugeny V, & Govaerts, Rafael. (2017). Typification of names and nomenclatural notes on juno irises (Iridaceae) from Western Asia, Western Europe, and North Africa. Phytotaxa, 303(2): 125–140. Claudel, C., Buerki, S., Chatrou, L. W., Antonelli, Alexandre, Alvarez, N. & Hetterscheid, W. (2017). Large-scale phylogenetic analysis of Amorphophallus (Araceae) derived from nuclear and plastid sequences reveals new subgeneric delineation. Botanical Journal of the Linnean Society, 184(1): 32–45 Condamine, Fabien L., Leslie, Andrew B. & Antonelli, Alexandre (2017). Ancient islands acted as refugia and pumps for conifer diversity. Cladistics. 33: 1. Díaz-Tapia, Pilar, McIvor, Lynne, Freshwater, D Wilson, Verbruggen, Heroen, Wynne, Michael J, & Maggs, Christine A. (2017). The genera Melanothamnus Bornet & Falkenberg and Vertebrata SF Gray constitute well–defined clades of the red algal tribe Polysiphonieae (Rhodomelaceae, Ceramiales). -
(12) United States Patent (10) Patent No.: US 9,072,776 B2 Kristiansen (45) Date of Patent: *Jul
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<I>Dendrophysellum</I>
ISSN (print) 0093-4666 © 2015. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/130.369 Volume 130, pp. 369–397 April–June 2015 Taxonomic studies in Chrysoderma, Corneromyces, Dendrophysellum, Hyphoradulum, and Mycobonia Karen K. Nakasone* Center for Forest Mycology Research, U.S. Forest Service One Gifford Pinchot Drive, Madison, WI 53726 USA *Correspondence to: [email protected] Abstract — Eight poorly known or unusual crustose and pileate basidiomycete species were studied. These included the type specimens of three monotypic genera: Chrysoderma alboluteum from Réunion is conspecific with Cerocorticium molle; Dendrophysellum amurense from the Russian Far East is a species of Vararia; and Hyphoradulum conspicuum belongs in Pseudolagarobasidium and is the first representative of the genus from Europe. Corticium murrillii, from Mexico, is congeneric with Corneromyces kinabalui. New combinations Vararia amurensis, Pseudolagarobasidium conspicuum, and Corneromyces murrillii are proposed. Mycobonia flava and M. brunneoleuca are macroscopically similar species with diagnostically distinct basidiospore shape and size. Mycobonia disciformis is accepted in Mycothele, and Mycobonia winkleri represents a species of unknown affinities. Recent molecular phylogenetic studies indicate that Mycobonia is embedded in Polyporus sensu stricto and is a synonym of Polyporus. Transferring M. brunneoleuca and M. flava to Polyporus requires the creation of the replacement names, P. polyacanthophorus and P. epitheloides. Key words — Amylocorticiales, cyanophilous basidiospores, Epithele, Favolus curtipes, Polyporales Introduction Tremendous advances in the systematics of basidiomycetes have been made in the last twenty years since the advent of molecular phylogenetics. Nevertheless, morphological studies are still essential to advance this discipline. In this paper, eight species of poorly known crustose or pileate basidiomycetes are described and illustrated.