Baculovirus As Versatile Vectors for Protein Display and Biotechnological Applications
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Identification of Two Major Virion Protein Genes of White Spot Syndrome Virus of Shrimp
Virology 266, 227–236 (2000) doi:10.1006/viro.1999.0088, available online at http://www.idealibrary.com on View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Identification of Two Major Virion Protein Genes of White Spot Syndrome Virus of Shrimp Marie¨lle C. W. van Hulten, Marcel Westenberg, Stephen D. Goodall, and Just M. Vlak1 Laboratory of Virology, Wageningen Agricultural University, Binnenhaven 11, 6709 PD Wageningen, The Netherlands Received August 25, 1999; returned to author for revision October 28, 1999; accepted November 8, 1999 White Spot Syndrome Virus (WSSV) is an invertebrate virus, causing considerable mortality in shrimp. Two structural proteins of WSSV were identified. WSSV virions are enveloped nucleocapsids with a bacilliform morphology with an approximate size of 275 ϫ 120 nm, and a tail-like extension at one end. The double-stranded viral DNA has an approximate size 290 kb. WSSV virions, isolated from infected shrimps, contained four major proteins: 28 kDa (VP28), 26 kDa (VP26), 24 kDa (VP24), and 19 kDa (VP19) in size, respectively. VP26 and VP24 were found associated with nucleocapsids; the others were associated with the envelope. N-terminal amino acid sequences of nucleocapsid protein VP26 and the envelope protein VP28 were obtained by protein sequencing and used to identify the respective genes (vp26 and vp28) in the WSSV genome. To confirm that the open reading frames of WSSV vp26 (612) and vp28 (612) are coding for the putative major virion proteins, they were expressed in insect cells using baculovirus vectors and analyzed by Western analysis. -
Development of Biotehcnological Tools for Studying Infectious Pathways of Canine and Human Parvoviruses
JYVÄSKYLÄ STUDIES IN BIOLOGICAL AND ENVIRONMENTAL SCIENCE 154 Leona Gilbert Development of Biotehcnological Tools for Studying Infectious Pathways of Canine and Human Parvoviruses JYVÄSKYLÄN YLIOPISTO JYVÄSKYLÄ STUDIES IN BIOLOGICAL AND ENVIRONMENTAL SCIENCE 154 Leona Gilbert Development of Biotechnological Tools for Studying Infectious Pathways of Canine and Human Parvoviruses Esitetään Jyväskylän yliopiston matemaattis-luonnontieteellisen tiedekunnan suostumuksella julkisesti tarkastettavaksi yliopiston Ambiotica-rakennuksen salissa (YAA303) kesäkuun 18. päivänä 2005 kello 12. Academic dissertation to be publicly discussed, by permission of the Faculty of Mathematics and Science of the University of Jyväskylä, in the Building Ambiotica, Auditorium YAA303, on June 18th, 2005 at 12 o'clock noon. UNIVERSITY OF JYVÄSKYLÄ JYVÄSKYLÄ 2005 Development of Biotechnological Tools for Studying Infectious Pathways of Canine and Human Parvoviruses JYVÄSKYLÄ STUDIES IN BIOLOGICAL AND ENVIRONMENTAL SCIENCE 154 Leona Gilbert Development of Biotechnological Tools for Studying Infectious Pathways of Canine and Human Parvoviruses UNIVERSITY OF JYVÄSKYLÄ JYVÄSKYLÄ 2005 Editors Jukka Särkkä Department of Biological and Environmental Science, University of Jyväskylä Pekka Olsbo, Irene Ylönen Publishing Unit, University Library of Jyväskylä Cover picture: Molecular models of the fluorescent biotechnological tools for CPV and B19. Picture by Leona Gilbert. ISBN 951-39-2134-4 (nid.) ISSN 1456-9701 Copyright © 2005, by University of Jyväskylä Jyväskylä University Printing House, Jyväskylä 2005 ABSTRACT Gilbert, Leona Development of biotechnological tools for studying infectious pathways of canine and human parvoviruses. Jyväskylä, University of Jyväskylä, 2005, 104 p. (Jyväskylä Studies in Biological and Environmental Science, ISSN 1456-9701; 154) ISBN 951-39-2182-4 Parvoviruses are among the smallest vertebrate DNA viruses known to date. The production of parvovirus-like particles (parvo-VLPs) has been successfully exploited for parvovirus vaccine development. -
Lack of Viral Mirna Expression in an Experimental Infection
Núñez-Hernández et al. Veterinary Research (2015) 46:48 DOI 10.1186/s13567-015-0181-4 VETERINARY RESEARCH SHORT REPORT Open Access Evaluation of the capability of the PCV2 genome to encode miRNAs: lack of viral miRNA expression in an experimental infection Fernando Núñez-Hernández1, Lester J Pérez2, Gonzalo Vera3, Sarai Córdoba3, Joaquim Segalés1,4, Armand Sánchez3,5 and José I Núñez1* Abstract Porcine circovirus type 2 (PCV2) is a ssDNA virus causing PCV2-systemic disease (PCV2-SD), one of the most important diseases in swine. MicroRNAs (miRNAs) are a new class of small non-coding RNAs that regulate gene expression post-transcriptionally. Viral miRNAs have recently been described and the number of viral miRNAs has been increasing in the past few years. In this study, small RNA libraries were constructed from two tissues of subclinically PCV2 infected pigs to explore if PCV2 can encode viral miRNAs. The deep sequencing data revealed that PCV2 does not express miRNAs in an in vivo subclinical infection. Introduction, methods, and results family with the highest miRNAs encoding capacity Porcine circovirus type 2-systemic disease (PCV2-SD) is [6,7]. Other viruses belonging to the families Polyoma- a devastating disease that causes important economic viridae, Adenoviridae, Papillomaviridae, Baculoviridae losses [1]. The disease is essentially caused by PCV2, a and Ascoviridae encode miRNAs in low numbers single stranded DNA, non enveloped virus belonging to [8-12]. Recently, a Human Torque Teno virus, a small, the Circoviridae family [2]. The PCV2 genome encodes ssDNA virus from the Anelloviridae family, that en- four ORFs. ORF1 encodes for two proteins (Rep and codes a miRNA involved in interferon modulation has Rep’) which are involved in replication. -
Baculovirus Nuclear Import: Open, Nuclear Pore Complex (NPC) Sesame
Viruses 2013, 5, 1885-1900; doi:10.3390/v5071885 OPEN ACCESS viruses ISSN 1999-4915 www.mdpi.com/journal/viruses Review Baculovirus Nuclear Import: Open, Nuclear Pore Complex (NPC) Sesame Shelly Au, Wei Wu and Nelly Panté * Department of Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, British Columbia V6T 1Z4, Canada; E-Mails: [email protected] (S.A.); [email protected] (W.W.) * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-604-822-3369; Fax: +1-604-822-2416. Received: 30 May 2013; in revised form: 17 July 2013 / Accepted: 17 July 2013 / Published: 23 July 2013 Abstract: Baculoviruses are one of the largest viruses that replicate in the nucleus of their host cells. During infection, the rod-shape, 250-nm long nucleocapsid delivers its genome into the nucleus. Electron microscopy evidence suggests that baculoviruses, specifically the Alphabaculoviruses (nucleopolyhedroviruses) and the Betabaculoviruses (granuloviruses), have evolved two very distinct modes for doing this. Here we review historical and current experimental results of baculovirus nuclear import studies, with an emphasis on electron microscopy studies employing the prototypical baculovirus Autographa californica multiple nucleopolyhedrovirus infecting cultured cells. We also discuss the implications of recent studies towards theories of nuclear transport mechanisms. Keywords: baculovirus; AcMNPV; nuclear import; nuclear pore complex; viruses 1. Introduction Baculoviruses are a large and diverse group of rod-shaped, enveloped, double-stranded DNA viruses that replicate in the nucleus of their host cells. They are pathogenic to arthropods, mainly insects, and are ubiquitously found in the environment. Members of the Baculoviridae family have been isolated from more than 700 host species. -
Expression Cloning of a Human Dual-Specificity Phosphatase TOSHIO ISHIBASHI, DONALD P
Proc. Nati. Acad. Sci. USA Vol. 89, pp. 12170-12174, December 1992 Biochemistry Expression cloning of a human dual-specificity phosphatase TOSHIO ISHIBASHI, DONALD P. BOTTARO, ANDREW CHAN, TORU MIKI, AND STUART A. AARONSON* Laboratory of Cellular and Molecular Biology, National Cancer Institute, Bethesda, MD 20892 Communicated by Leon A. Heppel, September 24, 1992 ABSTRACT Using an expression cloning strategy, we iso- substrate specificity for both phosphotyrosine and phospho- lated a cDNA encoding a human protein-tyrosine-phosphatase. serine. Bacteria expressing the kinase domain of the keratinocyte growth factor receptor (bek/fibroblast growth factor receptor 2) were infected with a fibroblast cDNA library in a phanid MATERIALS AND METHODS prokaryotic expression vector and screened with a monoclonal Plamid Construction of bek Kiame. The EcoRI-Sal I anti-phosphotyrosine antibody. Among several clones showing fragment of the mouse keratinocyte growth factor (KGF) decreased anti-phosphotyrosine recognition, one displayed receptor cDNA (15), which includes the kinase and carboxyl- phosphatase activity toward the kinase in vitro. The 4.1- terminal domains (residues 361-707), was ligated to the kilobase cDNA encoded a deduced protein of 185 amino ds EcoRP-Sal I fragment ofthe expression vector pCEV-lacZ to with limited sequence similar to the vaccinia virus phospha- generate the plasmid pCEV-bek (Fig. 1A). pCEV-lacZ is a tase VH1. The puriffied recombinant protein dephosphorlated pUC-based plasmid expression vector that produces a 3-gal several activated growth factor receptors, as well as serine- fusion protein under the control of the lac promoter (see phosphorylated casein, in vitro. Both serine and tyrosine phos- below). -
US5266490.Pdf
||||||||||||I|| US005266490A United States Patent (19) 11 Patent Number: 5,266,490 Davis et al. 45 Date of Patent: Nov.30, 1993 (54) MAMMALIAN EXPRESSION VECTOR Maniatis et al. (1990), Molecular Cloning: A Laboratory Manual, vol. 2, pp. 16.3-16.81. 75 Inventors: Samuel Davis, New York; George D. Martson (1987), DNA Cloning: A Practical Approach, Yancopoulos, Briarcliff Manor, both vol. 3, Chap. 4, pp. 59-88. of N.Y. Mizushima et al. (1990), Nucl. Acids Res. 18 (17): 5322. 73) Assignee: Regeneron Pharmaceuticals, Inc., Sambrook et al. (1988), Focus 10(3): 41-48. Tarrytown, N.Y. Simmons et al. (1988), J. Immunol. 141 (8): 2797-2800. Spector (1985), Genet. Engineering 7: 199-234. (21) Appl. No.: 678,408 Stamenkovic et al. (1988), J. Exp. Med. 167: 1975-1980. (22 Filed: Mar. 28, 1991 Urlaub et al. (1980), Proc. Nat. Acad. Sci USA 77(7): 51) Int. Cl.5...................... C12N 15/79; C12N 15/12; 426-4220. C12N 15/18 Woeltje et al. (1990), J. Biol. Chem. 265 (18): 10720-10725. 52) U.S. C. ................................ 435/320.1; 536/23.4; Wysocki et al. (1978); Proc. Nat. Acad. Sci USA 75(6): 536/23.5; 536/24.1 2844-2848. 58) Field of Search ................. 435/320.1, 69.1, 172.3; Seed, B. (Oct. 1987), Nature, vol. 329, pp. 840-842. 536/27, 24.1, 23.4, 23.5 Yanisch-Perron et al. (1985), Gene, vol. 33, pp. (56) References Cited 103-119. PUBLICATIONS Seed et al. (May, 1987), Proc. Nat. Acad. Sci USA, vol. 84, pp. 3365-3369. -
Effect of Various Treatments on White Spot Syndrome Virus (WSSV) from Penaeus Japonicus (Japan) and P. Monodon (Thailand)
魚 病 研 究 Fish Pathology,33(4),381-387,1998.10 Effect of Various Treatments on White Spot Syndrome Virus (WSSV) from Penaeus japonicus (Japan) and P. monodon (Thailand) Minoru Maeda*1, Jiraporn Kasornchandra*2,Toshiaki Itami*1, Nobutaka Suzuki*3, Oscar Hennig*4, Masakazu Kondo*1Juan D. Albaladejo*5 and Yukinori Takahashi* 1 *1Department of Applied Aquabiology, National Fisheries University, Shimonoseki, Yamaguchi 759-6595, Japan *2National Institute of Coastal Aquaculture, Songkla 90000, Thailand *3 Department of Food Science and Technology, National Fisheries University, Shimonoseki, Yamaguchi 759-6595, Japan *4Faculty of Fisheries , Nagasaki University, Nagasaki 852-8131, Japan *5Bureauof Fisheries and Aquatic Resources, Department of Agriculture, Quezon, Metro Manila 3008, Philippines (Received February 27, 1998) Two causative agents of white spot syndrome (WSS), penaeid rod-shaped DNA virus (PRDV) from infected kuruma shrimp (Penaeus japonicus) in Japan and systemic ectodermal and mesodermal baculovirus (SEMBV) from black tiger shrimp (P. monodon) in Thailand, were tested for their sensitivities to chemicals, temperature, drying and singlet oxygen (1O2). The infectivity of the treated PRDV and SEMBV was determined by challenge tests in kuruma shrimp and black tiger shrimp, respectively. Sodium hypochlorite inactivated PRDV at 1 ppm for 30 min and at 5 ppm for 10 min. SEMBV was inactivated by sodium hypochlorite at 10 ppm for 30 min. Povi done-iodine inactivated these viruses at a concentration of 10 ppm for 30 min. A high concentration of NaCl (12.5%) inactivated PRDV in 24 h at 25•Ž, and 15% NaCl inactivated SEMBV in 24 h at 28•Ž. PRDV was inactivated by heating at 50•Ž for 20 min, by drying at 30•Ž, and by using ethyl ether. -
Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris Spelaea)
viruses Article Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris spelaea) Ian H Mendenhall 1,* , Dolyce Low Hong Wen 1,2, Jayanthi Jayakumar 1, Vithiagaran Gunalan 3, Linfa Wang 1 , Sebastian Mauer-Stroh 3,4 , Yvonne C.F. Su 1 and Gavin J.D. Smith 1,5,6 1 Programme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore 169857, Singapore; [email protected] (D.L.H.W.); [email protected] (J.J.); [email protected] (L.W.); [email protected] (Y.C.F.S.) [email protected] (G.J.D.S.) 2 NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore 119077, Singapore 3 Bioinformatics Institute, Agency for Science, Technology and Research, Singapore 138671, Singapore; [email protected] (V.G.); [email protected] (S.M.-S.) 4 Department of Biological Sciences, National University of Singapore, Singapore 117558, Singapore 5 SingHealth Duke-NUS Global Health Institute, SingHealth Duke-NUS Academic Medical Centre, Singapore 168753, Singapore 6 Duke Global Health Institute, Duke University, Durham, NC 27710, USA * Correspondence: [email protected] Received: 30 January 2019; Accepted: 7 March 2019; Published: 12 March 2019 Abstract: Bats are unique mammals, exhibit distinctive life history traits and have unique immunological approaches to suppression of viral diseases upon infection. High-throughput next-generation sequencing has been used in characterizing the virome of different bat species. The cave nectar bat, Eonycteris spelaea, has a broad geographical range across Southeast Asia, India and southern China, however, little is known about their involvement in virus transmission. -
Temporal Proteomic Analysis of HIV Infection Reveals Remodelling of The
1 1 Temporal proteomic analysis of HIV infection reveals 2 remodelling of the host phosphoproteome 3 by lentiviral Vif variants 4 5 Edward JD Greenwood 1,2,*, Nicholas J Matheson1,2,*, Kim Wals1, Dick JH van den Boomen1, 6 Robin Antrobus1, James C Williamson1, Paul J Lehner1,* 7 1. Cambridge Institute for Medical Research, Department of Medicine, University of 8 Cambridge, Cambridge, CB2 0XY, UK. 9 2. These authors contributed equally to this work. 10 *Correspondence: [email protected]; [email protected]; [email protected] 11 12 Abstract 13 Viruses manipulate host factors to enhance their replication and evade cellular restriction. 14 We used multiplex tandem mass tag (TMT)-based whole cell proteomics to perform a 15 comprehensive time course analysis of >6,500 viral and cellular proteins during HIV 16 infection. To enable specific functional predictions, we categorized cellular proteins regulated 17 by HIV according to their patterns of temporal expression. We focussed on proteins depleted 18 with similar kinetics to APOBEC3C, and found the viral accessory protein Vif to be 19 necessary and sufficient for CUL5-dependent proteasomal degradation of all members of the 20 B56 family of regulatory subunits of the key cellular phosphatase PP2A (PPP2R5A-E). 21 Quantitative phosphoproteomic analysis of HIV-infected cells confirmed Vif-dependent 22 hyperphosphorylation of >200 cellular proteins, particularly substrates of the aurora kinases. 23 The ability of Vif to target PPP2R5 subunits is found in primate and non-primate lentiviral 2 24 lineages, and remodeling of the cellular phosphoproteome is therefore a second ancient and 25 conserved Vif function. -
PRODUCTION of CYDIA POMONELLA GRANULOVIRUS (Cpgv) in a HETERALOGOUS HOST, THAUMATOTIBIA LEUCOTRETA (MEYRICK) (FALSE CODLING MOTH)
PRODUCTION OF CYDIA POMONELLA GRANULOVIRUS (CpGV) IN A HETERALOGOUS HOST, THAUMATOTIBIA LEUCOTRETA (MEYRICK) (FALSE CODLING MOTH). A thesis submitted in fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY of RHODES UNIVERSITY By CRAIG BRIAN CHAMBERS December 2014 ABSTRACT Cydia pomonella (Linnaeus) (Family: Tortricidae), the codling moth, is considered one of the most significant pests of apples and pears worldwide, causing up to 80% crop loss in orchards if no control measures are applied. Cydia pomonella is oligophagous feeding on a number of alternate hosts including quince, walnuts, apricots, peaches, plums and nectarines. Historically the control of this pest has been achieved with the use of various chemical control strategies which have maintained pest levels below the economic threshold at a relatively low cost to the grower. However, there are serious concerns surrounding the use of chemical insecticides including the development of resistance in insect populations, the banning of various insecticides, regulations for lowering of the maximum residue level and employee and consumer safety. For this reason, alternate measures of control are slowly being adopted by growers such as mating disruption, cultural methods and the use of baculovirus biopesticides as part of integrated pest management programmes. The reluctance of growers to accept baculovirus or other biological control products in the past has been due to questionable product quality and inconsistencies in their field performance. Moreover, the development and application of biological control products is more costly than the use of chemical alternatives. Baculoviruses are arthropod specific viruses that are highly virulent to a number of lepidopteran species. Due to the virulence and host specificity of baculoviruses, Cydia pomonella granulovirus has been extensively and successfully used as part of integrated pest management systems for the control of C. -
Biological Characteristics of Experimental Genotype Mixtures of Cydia Pomonella Granulovirus
Biological characteristics of experimental genotype mixtures of Cydia pomonella Granulovirus (CpGV): Ability to control susceptible and resistant pest populations Benoit Graillot, Sandrine Bayle, Christine Blachère-Lopez, Samantha Besse, Myriam Siegwart, Miguel Lopez-Ferber To cite this version: Benoit Graillot, Sandrine Bayle, Christine Blachère-Lopez, Samantha Besse, Myriam Siegwart, et al.. Biological characteristics of experimental genotype mixtures of Cydia pomonella Granulovirus (CpGV): Ability to control susceptible and resistant pest populations. Viruses, MDPI, 2016, 8 (5), 12 p. 10.3390/v8050147. hal-01594837 HAL Id: hal-01594837 https://hal.archives-ouvertes.fr/hal-01594837 Submitted on 20 Nov 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License viruses Article Biological Characteristics of Experimental Genotype Mixtures of Cydia Pomonella Granulovirus (CpGV): Ability to Control Susceptible and Resistant Pest Populations Benoit Graillot 1,2, Sandrine Bayle 1, Christine -
Human Intestinal Nutrient Transporters
Gastrointestinal Functions, edited by Edgard E. Delvin and Michael J. Lentze. Nestle Nutrition Workshop Series. Pediatric Program. Vol. 46. Nestec Ltd.. Vevey/Lippincott Williams & Wilkins, Philadelphia © 2001. Human Intestinal Nutrient Transporters Ernest M. Wright Department of Physiology, UCLA School of Medicine, Los Angeles, California, USA Over the past decade, advances in molecular biology have revolutionized studies on intestinal nutrient absorption in humans. Before the advent of molecular biology, the study of nutrient absorption was largely limited to in vivo and in vitro animal model systems. This did result in the classification of the different transport systems involved, and in the development of models for nutrient transport across enterocytes (1). Nutrients are either absorbed passively or actively. Passive transport across the epithelium occurs down the nutrient's concentration gradient by simple or facilitated diffusion. The efficiency of simple diffusion depends on the lipid solubility of the nutrient in the plasma membranes—the higher the molecule's partition coefficient, the higher the rate of diffusion. Facilitated diffusion depends on the presence of simple carriers (uniporters) in the plasma membranes, and the kinetic properties of these uniporters. The rate of facilitated diffusion depends on the density, turnover number, and affinity of the uniporters in the brush border and basolateral membranes. The ' 'active'' transport of nutrients simply means that energy is provided to transport molecules across the gut against their concentration gradient. It is now well recog- nized that active nutrient transport is brought about by Na+ or H+ cotransporters (symporters) that harness the energy stored in ion gradients to drive the uphill trans- port of a solute.