A Checklist of Benthic Marine Algae of the Coast of Texas Michael J
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A Forensic and Phylogenetic Survey of Caulerpa Species
J. Phycol. 42, 1113–1124 (2006) r 2006 by the Phycological Society of America DOI: 10.1111/j.1529-8817.2006.0271.x A FORENSIC AND PHYLOGENETIC SURVEY OF CAULERPA SPECIES (CAULERPALES, CHLOROPHYTA) FROM THE FLORIDA COAST, LOCAL AQUARIUM SHOPS, AND E-COMMERCE: ESTABLISHING A PROACTIVE BASELINE FOR EARLY DETECTION1 Wytze T. Stam2 Jeanine L. Olsen Department of Marine Benthic Ecology and Evolution, Center for Ecological and Evolutionary Studies, Biological Centre, University of Groningen, PO Box 14, 9750 AA Haren, The Netherlands Susan Frisch Zaleski University of Southern California Sea Grant Program, 3616 Trousdale Parkway, Los Angeles, California 90089-0373, USA Steven N. Murray Department of Biological Science, California State University, Fullerton, PO Box 6850, Fullerton, California 92834-6850, USA Katherine R. Brown and Linda J. Walters Department of Biology, University of Central Florida, Orlando, Florida 32816, USA Baseline genotypes were established for 256 in- researchers interested in the evolution and speciat- dividuals of Caulerpa collected from 27 field loca- ion of Caulerpa. tions in Florida (including the Keys), the Bahamas, Key index words: aquarium trade; Caulerpa; e-com- US Virgin Islands, and Honduras, nearly doubling merce; invasive species; ITS; marine conservation; the number of available GenBank sequences. On the phylogeny; tufA basis of sequences from the nuclear rDNA-ITS 1 þ 2 and the chloroplast tufA regions, the phylogeny of Abbreviations: CTAB, cetyltrimethylammonium bro- Caulerpa was reassessed and the presence of inva- mide; ITS, internally transcribed spacer; MCMC, sive strains was determined. Surveys in central Flor- Markov chain Monte Carlo analysis ida and southern California of 4100 saltwater aquarium shops and 90 internet sites revealed that 450% sold Caulerpa. -
Supplementary Materials: Figure S1
1 Supplementary materials: Figure S1. Coral reef in Xiaodong Hai locality: (A) The southern part of the locality; (B) Reef slope; (C) Reef-flat, the upper subtidal zone; (D) Reef-flat, the lower intertidal zone. Figure S2. Algal communities in Xiaodong Hai at different seasons of 2016–2019: (A) Community of colonial blue-green algae, transect 1, the splash zone, the dry season of 2019; (B) Monodominant community of the red crust alga Hildenbrandia rubra, transect 3, upper intertidal, the rainy season of 2016; (C) Monodominant community of the red alga Gelidiella bornetii, transect 3, upper intertidal, the rainy season of 2018; (D) Bidominant community of the red alga Laurencia decumbens and the green Ulva clathrata, transect 3, middle intertidal, the dry season of 2019; (E) Polydominant community of algal turf with the mosaic dominance of red algae Tolypiocladia glomerulata (inset a), Palisada papillosa (center), and Centroceras clavulatum (inset b), transect 2, middle intertidal, the dry season of 2019; (F) Polydominant community of algal turf with the mosaic dominance of the red alga Hypnea pannosa and green Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2016; (G) Polydominant community of algal turf with the mosaic dominance of brown algae Padina australis (inset a) and Hydroclathrus clathratus (inset b), the red alga Acanthophora spicifera (inset c) and the green alga Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2019; (H) Sargassum spp. belt, transect 1, upper subtidal, the dry season of 2016. 2 3 Table S1. List of the seaweeds of Xiaodong Hai in 2016-2019. The abundance of taxa: rare sightings (+); common (++); abundant (+++). -
Predicting Risks of Invasion of Caulerpa Species in Florida
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2006 Predicting Risks Of Invasion Of Caulerpa Species In Florida Christian Glardon University of Central Florida Part of the Biology Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Masters Thesis (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Glardon, Christian, "Predicting Risks Of Invasion Of Caulerpa Species In Florida" (2006). Electronic Theses and Dissertations, 2004-2019. 840. https://stars.library.ucf.edu/etd/840 PREDICTING RISKS OF INVASION OF CAULERPA SPECIES IN FLORIDA by CHRISTIAN GEORGES GLARDON B.S. University of Lausanne, Switzerland A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in the Department of Biology in the College of Arts and Sciences at the University of Central Florida Orlando, Florida Spring Term 2006 ABSTRACT Invasions of exotic species are one of the primary causes of biodiversity loss on our planet (National Research Council 1995). In the marine environment, all habitat types including estuaries, coral reefs, mud flats, and rocky intertidal shorelines have been impacted (e.g. Bertness et al. 2001). Recently, the topic of invasive species has caught the public’s attention. In particular, there is worldwide concern about the aquarium strain of the green alga Caulerpa taxifolia (Vahl) C. Agardh that was introduced to the Mediterranean Sea in 1984 from the Monaco Oceanographic Museum. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
Passage of a Marine Brown Algal Dna Virus From
J. Phycol. 33, 838-844 (1997) PASSAGE OF A MARINE BROWN ALGAL DNA VIRUS FROM ECTOCARPUS FASCICULATUS (ECTOCARPALES, PHAEOPHYCEAE) TO MYRIOTHCHIA CLAVAEFOMS (DICTYOSIPHONALES,PHAEOPHYCEAE) : INFECTION SYMPTOMS AND RECOVERY' Ingo Maid, Elke Rometsch, Susanne Wolf, Markus KaM, Dieter G. Mulh Fakultat fiir Biologie, Universitat Konstanz, D-78457 Konstanz, Germany and Hiroshi Kawai Department of Biology, Kobe University, Kobe, 657 Japan ABSTRACT cross-infection have been discovered (see Discus- A dsDNA virus (EfasV-1) isolated from Ectocarpus sion). Polymerase chain reaction (PCR) amplifica- fasciculatus Huru.q infected Myriotrichia clavaeformis tion of an EsV-1 gene segment encoding a fragment Haruey, a species belonging to a different brown algal or- of structural glycoprotein (gp-1; Klein et al. 1995) der. The virus did not complete its infection cycb in the can be used as a diagnostic tool for the detection of fweign host but caused infertility due to malformed repro- viral DNA in total nucleic acid extracts from host ductive structures. After some time in culture, the host's thalli. Primers specific to gpl detect infections by r@oductive capacity was sometims restored with concom- both EsV-1 and EfasV-1 (Briiutigam et al. 1995, Se- itant loss of at least part of the viral genome. This inci- ngco et al. 1996), which are very similar in size and dence of interordinal virus transfer is discussed in relation capsid structure (Muller et al. 1996b). Using the to possibilities for virus-mediated horizontal gene transffer same primers, no amplification products could be in brown algae. detected with DNA of MclaV-1 (unpubl.). We report here on infection experiments and the Ks) index words: DAPI; DNA virus; Ectocarpus; ebc- application of the PCR diagnostic method. -
New Records of Benthic Marine Algae and Cyanobacteria for Costa Rica, and a Comparison with Other Central American Countries
Helgol Mar Res (2009) 63:219–229 DOI 10.1007/s10152-009-0151-1 ORIGINAL ARTICLE New records of benthic marine algae and Cyanobacteria for Costa Rica, and a comparison with other Central American countries Andrea Bernecker Æ Ingo S. Wehrtmann Received: 27 August 2008 / Revised: 19 February 2009 / Accepted: 20 February 2009 / Published online: 11 March 2009 Ó Springer-Verlag and AWI 2009 Abstract We present the results of an intensive sampling Rica; we discuss this result in relation to the emergence of program carried out from 2000 to 2007 along both coasts of the Central American Isthmus. Costa Rica, Central America. The presence of 44 species of benthic marine algae is reported for the first time for Costa Keywords Marine macroalgae Á Cyanobacteria Á Rica. Most of the new records are Rhodophyta (27 spp.), Costa Rica Á Central America followed by Chlorophyta (15 spp.), and Heterokontophyta, Phaeophycea (2 spp.). Overall, the currently known marine flora of Costa Rica is comprised of 446 benthic marine Introduction algae and 24 Cyanobacteria. This species number is an under estimation, and will increase when species of benthic The marine benthic flora plays an important role in the marine algae from taxonomic groups where only limited marine environment. It forms the basis of many marine information is available (e.g., microfilamentous benthic food chains and harbors an impressive variety of organ- marine algae, Cyanobacteria) are included. The Caribbean isms. Fish, decapods and mollusks are among the most coast harbors considerably more benthic marine algae (318 prominent species associated with the marine flora, which spp.) than the Pacific coast (190 spp.); such a trend has serves these animals as a refuge and for alimentation (Hay been observed in all neighboring countries. -
The Identification of Functional, Sequestered, Symbiotic Chloroplasts
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 2006 The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes Nicholas E. Curtis University of South Florida Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the American Studies Commons Scholar Commons Citation Curtis, Nicholas E., "The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes" (2006). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/2496 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. The Identification of Functional, Sequestered, Symbiotic Chloroplasts in Elysia clarki: A Crucial Step in the Study of Horizontally Transferred, Nuclear Algal Genes by Nicholas E. Curtis A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Biology College of Arts and Sciences University of South Florida Major Professor: Sidney K. Pierce, Jr., Ph.D. Clinton J. Dawes, Ph.D. Kathleen M. Scott, Ph.D. Brian T. Livingston, Ph.D. Date of Approval: June 15, 2006 Keywords: Bryopsidales, kleptoplasty, sacoglossan, rbcL, chloroplast symbiosis Penicillus, Halimeda, Bryopsis, Derbesia © Copyright 2006, Nicholas E. Curtis Note to Reader The original of this document contains color that is necessary for understanding the data. The original dissertation is on file with the USF library in Tampa, Florida. -
First Record of Calcareous Green Algae (Dasycladales, Halimedaceae) from the Paleocene Chehel Kaman Formation of North-Eastern Iran (Kopet-Dagh Basin)
https://doi.org/10.35463/j.apr.2021.01.06 ACTA PALAEONTOLOGICA ROMANIAE (2021) V. 17(1), P. 51-64 FIRST RECORD OF CALCAREOUS GREEN ALGAE (DASYCLADALES, HALIMEDACEAE) FROM THE PALEOCENE CHEHEL KAMAN FORMATION OF NORTH-EASTERN IRAN (KOPET-DAGH BASIN) Felix Schlagintweit1 Koorosh Rashidi2* & Abdolmajid Mosavinia3 Received: 11 November 2020 / Accepted: 4 January 2021 / Published online: 18 January 2021 Abstract The micropalaeontological inventory of the shallow-water carbonates of the Paleocene Chehel-Kaman Formation cropping out in the Kopet-Dagh Basin of north-eastern Iran is poorly known. New sampling has evidenced for the first time the occurrence of layers with abundant calcareous green algae including Dasycladales and Halimedaceae. The following dasycladalean taxa have been observed: Jodotella veslensis Morellet & Morellet, Cy- mopolia cf. mayaense Johnson & Kaska, Neomeris plagnensis Deloffre, Thyrsoporella-Trinocladus, Uteria aff. merienda (Elliott) and Acicularia div. sp. The studied section is devoid of larger benthic foraminifera and can be re- ferred to the middle-upper Paleocene (SBZ 2-4) due to the presence of Rahaghia khorassanica (Rahaghi). Some of the dasycladalean taxa are herein reported for the first time not only from Iran but also the Central Neotethyan realm. Keywords: Green algae, Paleogene, taxonomy, biostratigraphy, Kopet-Dagh Basin, Iran INTRODUCTION the suturing of northeast Iran to the Eurasian Turan plat- form resulting from the convergence between the Arabian Paleocene shallow-water carbonates are known from -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
2004 University of Connecticut Storrs, CT
Welcome Note and Information from the Co-Conveners We hope you will enjoy the NEAS 2004 meeting at the scenic Avery Point Campus of the University of Connecticut in Groton, CT. The last time that we assembled at The University of Connecticut was during the formative years of NEAS (12th Northeast Algal Symposium in 1973). Both NEAS and The University have come along way. These meetings will offer oral and poster presentations by students and faculty on a wide variety of phycological topics, as well as student poster and paper awards. We extend a warm welcome to all of our student members. The Executive Committee of NEAS has extended dormitory lodging at Project Oceanology gratis to all student members of the Society. We believe this shows NEAS members’ pride in and our commitment to our student members. This year we will be honoring Professor Arthur C. Mathieson as the Honorary Chair of the 43rd Northeast Algal Symposium. Art arrived with his wife, Myla, at the University of New Hampshire in 1965 from California. Art is a Professor of Botany and a Faculty in Residence at the Jackson Estuarine Laboratory of the University of New Hampshire. He received his Bachelor of Science and Master’s Degrees at the University of California, Los Angeles. In 1965 he received his doctoral degree from the University of British Columbia, Vancouver, Canada. Over a 43-year career Art has supervised many undergraduate and graduate students studying the ecology, systematics and mariculture of benthic marine algae. He has been an aquanaut-scientist for the Tektite II and also for the FLARE submersible programs. -
Ecology of Mesophotic Macroalgae and Halimeda Kanaloana Meadows in the Main Hawaiian Islands
ECOLOGY OF MESOPHOTIC MACROALGAE AND HALIMEDA KANALOANA MEADOWS IN THE MAIN HAWAIIAN ISLANDS A DISSERTATION SUBMITTED TO THE GRADUATE DIVISION OF THE UNIVERSITY OF HAWAI‘I AT MĀNOA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN BOTANY (ECOLOGY, EVOLUTION AND CONSERVATION BIOLOGY) AUGUST 2012 By Heather L. Spalding Dissertation Committee: Celia M. Smith, Chairperson Michael S. Foster Peter S. Vroom Cynthia L. Hunter Francis J. Sansone i © Copyright by Heather Lee Spalding 2012 All Rights Reserved ii DEDICATION This dissertation is dedicated to the infamous First Lady of Limu, Dr. Isabella Aiona Abbott. She was my inspiration for coming to Hawai‘i, and part of what made this place special to me. She helped me appreciate the intricacies of algal cross-sectioning, discover tela arachnoidea, and understand the value of good company (and red wine, of course). iii ACKNOWLEDGEMENTS I came to Hawai‘i with the intention of doing a nice little intertidal project on macroalgae, but I ended up at the end of the photic zone. Oh, well. This dissertation would not have been possible without the support of many individuals, and I am grateful to each of them. My committee has been very patient with me, and I appreciate their constant encouragement, gracious nature, and good humor. My gratitude goes to Celia Smith, Frank Sansone, Peter Vroom, Michael Foster, and Cindy Hunter for their time and dedication. Dr. Isabella Abbott and Larry Bausch were not able to finish their tenure on my committee, and I thank them for their efforts and contributions. -
Integrating Chytrid Fungal Parasites Into Plankton Ecology: Research Gaps and Needs
Environmental Microbiology (2017) 19 (10), 3802–3822 doi:10.1111/1462-2920.13827 Minireview Integrating chytrid fungal parasites into plankton ecology: research gaps and needs Thijs Frenken, 1 Elisabet Alacid, 2 Stella A. Berger, 3 Elizabeth C. Bourne, 4,5 Melanie Gerphagnon, 5 Hans-Peter Grossart, 3,6 Alena S. Gsell, 1 Bas W. Ibelings, 7 Maiko Kagami, 8 Frithjof C. K upper,€ 9 Peter M. Letcher, 10 Adeline Loyau, 11,12,13 Takeshi Miki, 14,15 Jens C. Nejstgaard, 3 Serena Rasconi, 16 Albert Re n~e, 2 Thomas Rohrlack, 17 Keilor Rojas-Jimenez, 3,18 Dirk S. Schmeller, 12,13 Bettina Scholz, 19,20 Kensuke Seto, 8,21 Telesphore Sime-Ngando, 22 Assaf Sukenik, 23 Dedmer B. Van de Waal, 1 Silke Van den Wyngaert, 3 Ellen Van Donk, 1,24 Justyna Wolinska, 5,25 Christian Wurzbacher, 26,27 and Ramsy Agha 5* 1Department of Aquatic Ecology, Netherlands Institute of 12 Department of Conservation Biology, Helmholtz Center Ecology (NIOO-KNAW), Droevendaalsesteeg 10, for Environmental Research – UFZ, Permoserstrasse Wageningen, PB, 6708, The Netherlands. 15, Leipzig, 04318, Germany. 2Departament de Biologia Marina i Oceanografia, 13 ECOLAB, Universit e de Toulouse, CNRS, INPT, UPS, Institut de Cie`ncies del Mar (CSIC), Pg. Mar ıtim de la Toulouse, France. Barceloneta, 37-49, Barcelona, 08003, Spain. 14 Institute of Oceanography, National Taiwan University, 3Department of Experimental Limnology, Leibniz-Institute No.1 Section 4, Roosevelt Road, Taipei, 10617, Taiwan. of Freshwater Ecology and Inland Fisheries (IGB), Alte 15 Research Center for Environmental Changes, Fischerhuette 2, Stechlin, D-16775, Germany. Academia Sinica, No.128 Section 2, Academia Road, 4Berlin Center for Genomics in Biodiversity Research, Nankang, Taipei, 11529, Taiwan.