Similarity and Diversity of the Desmodesmus Spp. Microalgae Isolated from Associations with White Sea Invertebrates
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Colony Formation in Three Species of the Family Scenedesmaceae
Colony formation in three species of the family Scenedesmaceae (Desmodesmus subspicatus, Scenedesmus acutus, Tetradesmus dimorphus) exposed to sodium dodecyl sulfate and its interference with grazing of Daphnia galeata Yusuke Oda ( [email protected] ) Shinshu University https://orcid.org/0000-0002-6555-1335 Masaki Sakamoto Toyama Prefectural University Yuichi Miyabara Shinshu University Research Article Keywords: Sodium dodecyl sulfate, Info-disruption, Colony formation, Scenedesmaceae, Daphnia Posted Date: March 30th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-346616/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License 1 Colony formation in three species of the family Scenedesmaceae (Desmodesmus subspicatus, 2 Scenedesmus acutus, Tetradesmus dimorphus) exposed to sodium dodecyl sulfate and its interference 3 with grazing of Daphnia galeata 4 5 Yusuke Oda*,1, Masaki Sakamoto2, Yuichi Miyabara3,4 6 7 1Department of Science and Technology, Shinshu University, Suwa, Nagano, Japan 8 2Department of Environmental and Civil Engineering, Toyama Prefectural University, Imizu, Toyama, 9 Japan 10 3Suwa Hydrobiological Station, Faculty of Science, Shinshu University, Suwa, Nagano, Japan 11 4Institute of Mountain Science, Shinshu University, Suwa, Nagano, Japan 12 13 *Corresponding author: Y. O da 14 15 Y. O d a 16 Phone: +81-90-9447-9029 17 Email: [email protected] 18 ORCID: 0000-0002-6555-1335 19 20 21 22 23 Acknowledgments 24 This study was supported by a Grant-in-Aid for Japan Society for the Promotion of Sciences (JSPS) 25 Fellows (Grant No. JP20J11681). We thank Natalie Kim, PhD, from Edanz Group (https://en-author- 26 services.edanz.com/ac) for editing a draft of this manuscript. -
The Plankton Lifeform Extraction Tool: a Digital Tool to Increase The
Discussions https://doi.org/10.5194/essd-2021-171 Earth System Preprint. Discussion started: 21 July 2021 Science c Author(s) 2021. CC BY 4.0 License. Open Access Open Data The Plankton Lifeform Extraction Tool: A digital tool to increase the discoverability and usability of plankton time-series data Clare Ostle1*, Kevin Paxman1, Carolyn A. Graves2, Mathew Arnold1, Felipe Artigas3, Angus Atkinson4, Anaïs Aubert5, Malcolm Baptie6, Beth Bear7, Jacob Bedford8, Michael Best9, Eileen 5 Bresnan10, Rachel Brittain1, Derek Broughton1, Alexandre Budria5,11, Kathryn Cook12, Michelle Devlin7, George Graham1, Nick Halliday1, Pierre Hélaouët1, Marie Johansen13, David G. Johns1, Dan Lear1, Margarita Machairopoulou10, April McKinney14, Adam Mellor14, Alex Milligan7, Sophie Pitois7, Isabelle Rombouts5, Cordula Scherer15, Paul Tett16, Claire Widdicombe4, and Abigail McQuatters-Gollop8 1 10 The Marine Biological Association (MBA), The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK. 2 Centre for Environment Fisheries and Aquacu∑lture Science (Cefas), Weymouth, UK. 3 Université du Littoral Côte d’Opale, Université de Lille, CNRS UMR 8187 LOG, Laboratoire d’Océanologie et de Géosciences, Wimereux, France. 4 Plymouth Marine Laboratory, Prospect Place, Plymouth, PL1 3DH, UK. 5 15 Muséum National d’Histoire Naturelle (MNHN), CRESCO, 38 UMS Patrinat, Dinard, France. 6 Scottish Environment Protection Agency, Angus Smith Building, Maxim 6, Parklands Avenue, Eurocentral, Holytown, North Lanarkshire ML1 4WQ, UK. 7 Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK. 8 Marine Conservation Research Group, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK. 9 20 The Environment Agency, Kingfisher House, Goldhay Way, Peterborough, PE4 6HL, UK. 10 Marine Scotland Science, Marine Laboratory, 375 Victoria Road, Aberdeen, AB11 9DB, UK. -
RECON: Reef Effect Structures in the North Sea, Islands Or Connections?
RECON: Reef effect structures in the North Sea, islands or connections? Summary Report Authors: Coolen, J.W.P. & R.G. Jak (eds.). Wageningen University & Research Report C074/17A RECON: Reef effect structures in the North Sea, islands or connections? Summary Report Revised Author(s): Coolen, J.W.P. & R.G. Jak (eds.). With contributions from J.W.P. Coolen, B.E. van der Weide, J. Cuperus, P. Luttikhuizen, M. Schutter, M. Dorenbosch, F. Driessen, W. Lengkeek, M. Blomberg, G. van Moorsel, M.A. Faasse, O.G. Bos, I.M. Dias, M. Spierings, S.G. Glorius, L.E. Becking, T. Schol, R. Crooijmans, A.R. Boon, H. van Pelt, F. Kleissen, D. Gerla, R.G. Jak, S. Degraer, H.J. Lindeboom Publication date: January 2018 Wageningen Marine Research Den Helder, January 2018 Wageningen Marine Research report C074/17A Coolen, J.W.P. & R.G. Jak (eds.) 2017. RECON: Reef effect structures in the North Sea, islands or connections? Summary Report Wageningen, Wageningen Marine Research, Wageningen Marine Research report C074/17A. 33 pp. Client: INSITE joint industry project Attn.: Richard Heard 6th Floor East, Portland House, Bressenden Place London SW1E 5BH, United Kingdom This report can be downloaded for free from https://doi.org/10.18174/424244 Wageningen Marine Research provides no printed copies of reports Wageningen Marine Research is ISO 9001:2008 certified. Photo cover: Udo van Dongen. © 2017 Wageningen Marine Research Wageningen UR Wageningen Marine Research The Management of Wageningen Marine Research is not responsible for resulting institute of Stichting Wageningen damage, as well as for damage resulting from the application of results or Research is registered in the Dutch research obtained by Wageningen Marine Research, its clients or any claims traderecord nr. -
Permian–Triassic Non-Marine Algae of Gondwana—Distributions
Earth-Science Reviews 212 (2021) 103382 Contents lists available at ScienceDirect Earth-Science Reviews journal homepage: www.elsevier.com/locate/earscirev Review Article Permian–Triassic non-marine algae of Gondwana—Distributions, natural T affinities and ecological implications ⁎ Chris Maysa,b, , Vivi Vajdaa, Stephen McLoughlina a Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden b Monash University, School of Earth, Atmosphere and Environment, 9 Rainforest Walk, Clayton, VIC 3800, Australia ARTICLE INFO ABSTRACT Keywords: The abundance, diversity and extinction of non-marine algae are controlled by changes in the physical and Permian–Triassic chemical environment and community structure of continental ecosystems. We review a range of non-marine algae algae commonly found within the Permian and Triassic strata of Gondwana and highlight and discuss the non- mass extinctions marine algal abundance anomalies recorded in the immediate aftermath of the end-Permian extinction interval Gondwana (EPE; 252 Ma). We further review and contrast the marine and continental algal records of the global biotic freshwater ecology crises within the Permian–Triassic interval. Specifically, we provide a case study of 17 species (in 13 genera) palaeobiogeography from the succession spanning the EPE in the Sydney Basin, eastern Australia. The affinities and ecological im- plications of these fossil-genera are summarised, and their global Permian–Triassic palaeogeographic and stra- tigraphic distributions are collated. Most of these fossil taxa have close extant algal relatives that are most common in freshwater, brackish or terrestrial conditions, and all have recognizable affinities to groups known to produce chemically stable biopolymers that favour their preservation over long geological intervals. -
A Taxonomic Revision of Desmodesmus Serie Desmodesmus (Sphaeropleales, Scenedesmaceae)
Fottea, Olomouc, 17(2): 191–208, 2017 191 DOI: 10.5507/fot.2017.001 A taxonomic revision of Desmodesmus serie Desmodesmus (Sphaeropleales, Scenedesmaceae) Eberhard HEGEWALD1 & Anke BRABAND2 1 Grüner Weg 20, D–52382 Niederzier, Germany 2 LCG, Ostendstr. 25, D–12451 Berlin, Germany Abstract: The revision of the serie Desmodesmus, based on light microscopy, TEM, SEM and ITS2r DNA, allowed us to distinguish among the taxa Desmodesmus communis var. communis, var. polisicus, D. curvatocornis, D. rectangularis comb. nov., D. pseudocommunis n. sp. var. texanus n. var. and f. verrucosus n. f., D. protuberans, D. protuberans var. communoides var. nov., D. pseudoprotuberans n. sp., D. schmidtii n. sp. Keys were given for light microscopy, electron microscopy and ITS2r DNA. Key words: Desmodesmus, morphology, cell wall ultrastructure, cell size, ITS–2, new Desmodesmus taxa, phylogeny, taxonomy, variability INTRODUCTION E.HEGEWALD. Acutodesmus became recently a syno- nyme of Tetrades- mus (WYNNE & HALLAN 2016). Members of the former genus Scenedesmus s.l. were The subsection Desmodesmus as described by common in eutrophic waters all over the world. Hence HEGEWALD (1978) was best characterized by the cell taxa of that “genus” were described early in the 19th wall ultra–structure which consists of an outer cell wall century (e. g. TURPIN 1820; 1828; MEYEN 1828; EHREN- layer with net–like structure, lifted by tubes (PICKETT– BERG 1834; CORDA 1835). Several of the early (before HEAPS & STAEHELIN 1975; KOMÁREK & LUDVÍK1972; 1840) described taxa were insufficiently described and HEGEWALD 1978, 1997) and rosettes covered or sur- hence were often misinterpreted by later authors, es- rounded by tubes. -
The Draft Genome of the Small, Spineless Green Alga
Protist, Vol. 170, 125697, December 2019 http://www.elsevier.de/protis Published online date 25 October 2019 ORIGINAL PAPER Protist Genome Reports The Draft Genome of the Small, Spineless Green Alga Desmodesmus costato-granulatus (Sphaeropleales, Chlorophyta) a,b,2 a,c,2 d,e f g Sibo Wang , Linzhou Li , Yan Xu , Barbara Melkonian , Maike Lorenz , g b a,e f,1 Thomas Friedl , Morten Petersen , Sunil Kumar Sahu , Michael Melkonian , and a,b,1 Huan Liu a BGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China b Department of Biology, University of Copenhagen, Copenhagen, Denmark c Department of Biotechnology and Biomedicine, Technical University of Denmark, Copenhagen, Denmark d BGI Education Center, University of Chinese Academy of Sciences, Beijing, China e State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, Shenzhen 518083, China f University of Duisburg-Essen, Campus Essen, Faculty of Biology, Universitätsstr. 2, 45141 Essen, Germany g Department ‘Experimentelle Phykologie und Sammlung von Algenkulturen’, University of Göttingen, Nikolausberger Weg 18, 37073 Göttingen, Germany Submitted October 9, 2019; Accepted October 21, 2019 Desmodesmus costato-granulatus (Skuja) Hegewald 2000 (Sphaeropleales, Chlorophyta) is a small, spineless green alga that is abundant in the freshwater phytoplankton of oligo- to eutrophic waters worldwide. It has a high lipid content and is considered for sustainable production of diverse compounds, including biofuels. Here, we report the draft whole-genome shotgun sequencing of D. costato-granulatus strain SAG 18.81. The final assembly comprises 48,879,637 bp with over 4,141 scaffolds. This whole-genome project is publicly available in the CNSA (https://db.cngb.org/cnsa/) of CNGBdb under the accession number CNP0000701. -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department. -
Distribution and Ecological Habitat of Scenedesmus and Related Genera in Some Freshwater Resources of Northern and North-Eastern Thailand
BIODIVERSITAS ISSN: 1412-033X Volume 18, Number 3, July 2017 E-ISSN: 2085-4722 Pages: 1092-1099 DOI: 10.13057/biodiv/d180329 Distribution and ecological habitat of Scenedesmus and related genera in some freshwater resources of Northern and North-Eastern Thailand KITTIYA PHINYO1,♥, JEERAPORN PEKKOH1,2, YUWADEE PEERAPORNPISAL1,♥♥ 1Department of Biology, Faculty of Science, Chiang Mai University. Chiang Mai 50200, Thailand. Tel. +66-53-94-3346, Fax. +66-53-89-2259, ♥email: [email protected], ♥♥ [email protected] 2Science and Technology Research Institute, Faculty of Science, Chiang Mai University. Chiang Mai 50200, Thailand Manuscript received: 12 April 2017. Revision accepted: 21 June 2017. Abstract. Phinyo K, Pekkoh J, Peerapornpisal Y. 2017. Distribution and ecological habitat of Scenedesmus and related genera in some freshwater resources of Northern and North-Eastern Thailand. Biodiversitas 18: 1092-1099. The family Scenedesmaceae is made up of freshwater green microalgae that are commonly found in bodies of freshwater, particularly in water of moderate to polluted water quality. However, as of yet, there have not been any studies on the diversity of this family in Thailand and in similar regions of tropical areas. Therefore, this research study aims to investigate the richness, distribution and ecological conditions of the species of the Scenedesmus and related genera through the assessment of water quality. The assessment of water quality was based on the physical and chemical parameters at 50 sampling sites. A total of 35 taxa were identified that were composed of six genera, i.e. Acutodesmus, Comasiella, Desmodesmus, Pectinodesmus, Scenedesmus and Verrucodesmus. Eleven taxa were newly recorded in Thailand. -
THE SUBLITTORAL FAUNA of TWO SANDY BAYS on the ISLE of CUMBRAE, FIRTH of CLYDE by R
.'1. Mar. bioI. Ass. U.K. (1955) 34, 161--180 161 Printed in Great Britain THE SUBLITTORAL FAUNA OF TWO SANDY BAYS ON THE ISLE OF CUMBRAE, FIRTH OF CLYDE By R. B. Clark Department of Zoology, Glasgow University and A. Milne Department of Agriculture, King's College, Newcastle on Tyne (Text-figs. I and 2) INTRODUCTION There is a considerable literature on the ecologyof intertidal animals and a growing one on the sublittoral fauna. Largely because of the difficulty of taking samples in very shallow water, litde attention has been paid to the continuation of the intertidal zonation below the low-water mark. Although incomplete in some respects, the results of the present survey are published, partly to help bridge the gap between studies of sublittoral and intertidal faunas, pardy because it is unlikelythat this surveywill everbe completed and partly because the intertidal fauna of one of the bays is particularly well known. The work was begun in 1938by one of the authors (A.M.) but was discontinued at the outbreak of the late war. Since 1949 further collections have been made and the identity of most of the species taken in the earlier sampling has been checked. The collectionsof animals and a full account of the results have been deposited in the Marine Laboratory at Millport. METHODS None of the larger and more reliable bottom samplers can be operated from the small boat that must be used in shallow water. All samples in the quanti- tative survey were taken by the Robertson mud bucket, that is, a cylindrical bucket about 15 in. -
2016 National Algal Biofuels Technology Review
National Algal Biofuels Technology Review Bioenergy Technologies Office June 2016 National Algal Biofuels Technology Review U.S. Department of Energy Office of Energy Efficiency and Renewable Energy Bioenergy Technologies Office June 2016 Review Editors: Amanda Barry,1,5 Alexis Wolfe,2 Christine English,3,5 Colleen Ruddick,4 and Devinn Lambert5 2010 National Algal Biofuels Technology Roadmap: eere.energy.gov/bioenergy/pdfs/algal_biofuels_roadmap.pdf A complete list of roadmap and review contributors is available in the appendix. Suggested Citation for this Review: DOE (U.S. Department of Energy). 2016. National Algal Biofuels Technology Review. U.S. Department of Energy, Office of Energy Efficiency and Renewable Energy, Bioenergy Technologies Office. Visit bioenergy.energy.gov for more information. 1 Los Alamos National Laboratory 2 Oak Ridge Institute for Science and Education 3 National Renewable Energy Laboratory 4 BCS, Incorporated 5 Bioenergy Technologies Office This report is being disseminated by the U.S. Department of Energy. As such, the document was prepared in compliance with Section 515 of the Treasury and General Government Appropriations Act for Fiscal Year 2001 (Public Law No. 106-554) and information quality guidelines issued by the Department of Energy. Further, this report could be “influential scientific information” as that term is defined in the Office of Management and Budget’s Information Quality Bulletin for Peer Review (Bulletin). This report has been peer reviewed pursuant to section II.2 of the Bulletin. Cover photo courtesy of Qualitas Health, Inc. BIOENERGY TECHNOLOGIES OFFICE Preface Thank you for your interest in the U.S. Department of Energy (DOE) Bioenergy Technologies Office’s (BETO’s) National Algal Biofuels Technology Review. -
Validation Des Caractéristiques Biologiques Et Fonctionnelles Des Communautés Benthiques Associées À Des Habitats Côtiers Dans L’Arctique Canadien
Validation des caractéristiques biologiques et fonctionnelles des communautés benthiques associées à des habitats côtiers dans l’Arctique canadien Mémoire présenté dans le cadre du programme de maîtrise en océanographie en vue de l’obtention du grade de maître ès sciences (M.Sc.) PAR © Valérie Cypihot Octobre 2018 ii iii Composition du jury : Gesche Winkler, présidente du jury, UQAR-ISMER Philippe Archambault, directeur de recherche, Université Laval Kimberly L. Howland, codirectrice de recherche, Fisheries and Oceans Canada Mathieu Cusson, examinateur externe, Université du Québec à Chicoutimi Dépôt initial le 19 juin 2018 Dépôt final le 18 octobre 2018 iv v UNIVERSITÉ DU QUÉBEC À RIMOUSKI Service de la bibliothèque Avertissement La diffusion de ce mémoire ou de cette thèse se fait dans le respect des droits de son auteur, qui a signé le formulaire « Autorisation de reproduire et de diffuser un rapport, un mémoire ou une thèse ». En signant ce formulaire, l’auteur concède à l’Université du Québec à Rimouski une licence non exclusive d’utilisation et de publication de la totalité ou d’une partie importante de son travail de recherche pour des fins pédagogiques et non commerciales. Plus précisément, l’auteur autorise l’Université du Québec à Rimouski à reproduire, diffuser, prêter, distribuer ou vendre des copies de son travail de recherche à des fins non commerciales sur quelque support que ce soit, y compris l’Internet. Cette licence et cette autorisation n’entraînent pas une renonciation de la part de l’auteur à ses droits moraux ni à ses droits de propriété intellectuelle. Sauf entente contraire, l’auteur conserve la liberté de diffuser et de commercialiser ou non ce travail dont il possède un exemplaire. -
Freshwater Algae in Britain and Ireland - Bibliography
Freshwater algae in Britain and Ireland - Bibliography Floras, monographs, articles with records and environmental information, together with papers dealing with taxonomic/nomenclatural changes since 2003 (previous update of ‘Coded List’) as well as those helpful for identification purposes. Theses are listed only where available online and include unpublished information. Useful websites are listed at the end of the bibliography. Further links to relevant information (catalogues, websites, photocatalogues) can be found on the site managed by the British Phycological Society (http://www.brphycsoc.org/links.lasso). Abbas A, Godward MBE (1964) Cytology in relation to taxonomy in Chaetophorales. Journal of the Linnean Society, Botany 58: 499–597. Abbott J, Emsley F, Hick T, Stubbins J, Turner WB, West W (1886) Contributions to a fauna and flora of West Yorkshire: algae (exclusive of Diatomaceae). Transactions of the Leeds Naturalists' Club and Scientific Association 1: 69–78, pl.1. Acton E (1909) Coccomyxa subellipsoidea, a new member of the Palmellaceae. Annals of Botany 23: 537–573. Acton E (1916a) On the structure and origin of Cladophora-balls. New Phytologist 15: 1–10. Acton E (1916b) On a new penetrating alga. New Phytologist 15: 97–102. Acton E (1916c) Studies on the nuclear division in desmids. 1. Hyalotheca dissiliens (Smith) Bréb. Annals of Botany 30: 379–382. Adams J (1908) A synopsis of Irish algae, freshwater and marine. Proceedings of the Royal Irish Academy 27B: 11–60. Ahmadjian V (1967) A guide to the algae occurring as lichen symbionts: isolation, culture, cultural physiology and identification. Phycologia 6: 127–166 Allanson BR (1973) The fine structure of the periphyton of Chara sp.