Improved Control of Nematodes in Carrot Production
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Plant-Parasitic Nematodes and Their Management: a Review
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by International Institute for Science, Technology and Education (IISTE): E-Journals Journal of Biology, Agriculture and Healthcare www.iiste.org ISSN 2224-3208 (Paper) ISSN 2225-093X (Online) Vol.8, No.1, 2018 Plant-Parasitic Nematodes and Their Management: A Review Misgana Mitiku Department of Plant Pathology, Southern Agricultural Research Institute, Jinka, Agricultural Research Center, Jinka, Ethiopia Abstract Nowhere will the need to sustainably increase agricultural productivity in line with increasing demand be more pertinent than in resource poor areas of the world, especially Africa, where populations are most rapidly expanding. Although a 35% population increase is projected by 2050. Significant improvements are consequently necessary in terms of resource use efficiency. In moving crop yields towards an efficiency frontier, optimal pest and disease management will be essential, especially as the proportional production of some commodities steadily shifts. With this in mind, it is essential that the full spectrums of crop production limitations are considered appropriately, including the often overlooked nematode constraints about half of all nematode species are marine nematodes, 25% are free-living, soil inhabiting nematodes, I5% are animal and human parasites and l0% are plant parasites. Today, even with modern technology, 5-l0% of crop production is lost due to nematodes in developed countries. So, the aim of this work was to review some agricultural nematodes genera, species they contain and their management methods. In this review work the species, feeding habit, morphology, host and symptoms they show on the effected plant and management of eleven nematode genera was reviewed. -
Transcriptome Profiling of Resistance Response To
Bali et al. BMC Genomics (2019) 20:907 https://doi.org/10.1186/s12864-019-6257-1 RESEARCH ARTICLE Open Access Transcriptome profiling of resistance response to Meloidogyne chitwoodi introgressed from wild species Solanum bulbocastanum into cultivated potato Sapinder Bali1, Kelly Vining2, Cynthia Gleason1, Hassan Majtahedi3, Charles R. Brown3 and Vidyasagar Sathuvalli4* Abstract Background: Meloidogyne chitwoodi commonly known as Columbia root-knot nematode or CRKN is one of the most devastating pests of potato in the Pacific Northwest of the United States of America. In addition to the roots, it infects potato tubers causing internal as well as external defects, thereby reducing the market value of the crop. Commercial potato varieties with CRKN resistance are currently unavailable. Race specific resistance to CRKN has been introgressed from the wild, diploid potato species Solanum bulbocastanum into the tetraploid advanced selection PA99N82–4 but there is limited knowledge about the nature of its resistance mechanism. In the present study, we performed histological and differential gene expression profiling to understand the mode of action of introgressed CRKN resistance in PA99N82–4 in comparison to the CRKN susceptible variety Russet Burbank. Results: Histological studies revealed that the nematode juveniles successfully infect both resistant and susceptible root tissue by 48 h post inoculation, but the host resistance response restricts nematode feeding site formation in PA99N82–4. Differential gene expression analysis shows that 1268, 1261, 1102 and 2753 genes were up-regulated in PA99N82–4 at 48 h, 7 days, 14 days and 21 days post inoculation respectively, of which 61 genes were common across all the time points. -
Diversity, Phylogeny, Characterization and Diagnostics of Root-Knot and Lesion Nematodes
Diversity, phylogeny, characterization and diagnostics of root-knot and lesion nematodes Toon Janssen Promotors: Prof. Dr. Wim Bert Prof. Dr. Gerrit Karssen Thesis submitted to obtain the degree of doctor in Sciences, Biology Proefschrift voorgelegd tot het bekomen van de graad van doctor in de Wetenschappen, Biologie 1 Table of contents Acknowledgements Chapter 1: general introduction 1 Organisms under study: plant-parasitic nematodes .................................................... 11 1.1 Pratylenchus: root-lesion nematodes ..................................................................................... 13 1.2 Meloidogyne: root-knot nematodes ....................................................................................... 15 2 Economic importance ..................................................................................................... 17 3 Identification of plant-parasitic nematodes .................................................................. 19 4 Variability in reproduction strategies and genome evolution ..................................... 22 5 Aims .................................................................................................................................. 24 6 Outline of this study ........................................................................................................ 25 Chapter 2: Mitochondrial coding genome analysis of tropical root-knot nematodes (Meloidogyne) supports haplotype based diagnostics and reveals evidence of recent reticulate evolution. 1 Abstract -
Observations on the Genus Doronchus Andrássy
Vol. 20, No. 1, pp.91-98 International Journal of Nematology June, 2010 Occurrence and distribution of nematodes in Idaho crops Saad L. Hafez*, P. Sundararaj*, Zafar A. Handoo** and M. Rafiq Siddiqi*** *University of Idaho, 29603 U of I Lane, Parma, Idaho 83660, USA **USDA-ARS-Nematology Laboratory, Beltsville, Maryland 20705, USA ***Nematode Taxonomy Laboratory, 24 Brantwood Road, Luton, LU1 1JJ, England, UK E-mail: [email protected] Abstract. Surveys were conducted in Idaho, USA during the 2000-2006 cropping seasons to study the occurrence, population density, host association and distribution of plant-parasitic nematodes associated with major crops, grasses and weeds. Eighty-four species and 43 genera of plant-parasitic nematodes were recorded in soil samples from 29 crops in 20 counties in Idaho. Among them, 36 species are new records in this region. The highest number of species belonged to the genus Pratylenchus; P. neglectus was the predominant species among all species of the identified genera. Among the endoparasitic nematodes, the highest percentage of occurrence was Pratylenchus (29.7) followed by Meloidogyne (4.4) and Heterodera (3.4). Among the ectoparasitic nematodes, Helicotylenchus was predominant (8.3) followed by Mesocriconema (5.0) and Tylenchorhynchus (4.8). Keywords. Distribution, Helicotylenchus, Heterodera, Idaho, Meloidogyne, Mesocriconema, population density, potato, Pratylenchus, survey, Tylenchorhynchus, USA. INTRODUCTION and cropping systems in Idaho are highly conducive for nematode multiplication. Information concerning the revious reports have described the association of occurrence and distribution of nematodes in Idaho is plant-parasitic nematode species associated with important to assess their potential to cause economic damage P several crops in the Pacific Northwest (Golden et al., to many crop plants. -
The Damage Potential of Pin Nematodes, Paratylenchus Micoletzky, 1922 Sensu Lato Spp
J. Crop Prot. 2019, 8 (3): 243-257______________________________________________________ Review Article The damage potential of pin nematodes, Paratylenchus Micoletzky, 1922 sensu lato spp. (Nematoda: Tylenchulidae) Reza Ghaderi Department of Plant Protection, School of Agriculture, Shiraz University, Shiraz, Iran. Abstract: The genus Paratylenchus sensu lato includes members belonging to the genera Paratylenchus sensustricto (species with 10 to 40µm long stylet), Gracilacus (species with 40-120µm long stylet), Gracilpaurus (species having cuticular punctuations) and Paratylenchoides (species having sclerotized cephalic framework). Long stylet species become swollen and feed as sedentary parasites of roots, some feed from cortex of perennial host roots, but most species feed as sedentary ectoparasites on roots. In other words, species with stylet shorter than 40µm commonly feed on epidermal cells, whilst the species with longer stylet nourish primarily in cortical tissue, without penetration into the plant tissue. In general, pin nematodes, Paratylenchus spp. are parasites of higher plants with a higher abundance in the rhizosphere of trees and perennials. In present review, an attempt is made to document published information on the pathogenicity and damage potential of the pin nematodes to plants. Keywords: Gracilacus, damage, pathogenicity, perennials, pin nematodes, population, trees Introduction12 Lisetskaya, 1963; 1965; Braun et al., 1966; Fisher, 1967; Ghaderi and Karegar, 2013), and The pin nematodes, Paratylenchus Micoletzky, in some nurseries of conifers, the density of Downloaded from jcp.modares.ac.ir at 5:11 IRST on Sunday October 3rd 2021 1922 sensu lato, firstly have long been population was increased to more than 1000 considered as free-living nematodes, but further individuals per 100cm3 of soil (Ruehle, 1967; studies on their life cycle led researchers to find Rossner, 1969). -
PM 9/17 (1) Meloidogyne Chitwoodi and Meloidogyne Fallax
Bulletin OEPP/EPPO Bulletin (2013) 43 (3), 527–533 ISSN 0250-8052. DOI: 10.1111/epp.12079 European and Mediterranean Plant Protection Organization Organisation Europe´enne et Me´diterrane´enne pour la Protection des Plantes PM 9/17 (1) National regulatory control systems Systemes de lutte nationaux reglementaires PM 9/17 (1) Meloidogyne chitwoodi and Meloidogyne fallax Specific scope Specific approval and amendment This standard describes a National regulatory control sys- Approved in 2013-09. tem for Meloidogyne chitwoodi and Meloidogyne fallax. M. fallax, temperature, length of the growing season and Introduction soil texture. These nematodes have mostly been reported Meloidogyne chitwoodi and M. fallax (root-knot nematodes) from sandy and sandy-loam soils. Economic damage are EPPO A2 pests and details about their biology, distribu- increases with the number of generations that occur in one tion and economic importance can be found in EPPO/CABI growing season. Tuber damage in potatoes may occur when (1997) and the Plant Quarantine data Retrieval system soil temperatures exceed 1000 degree days above 5°C but (PQR) on the EPPO website. Recently, pest risk assess- the threshold for significant tuber damage is assessed to be ments for both species have been conducted for the territory about 1500 degree days above 5°C (Macleod et al., 2012). of the EU including extensive datasheets and an evaluation Juveniles of M. chitwoodi and M. fallax can only move of possible risk reduction options. The work has been con- short distances (<1 m) in the soil. Spread therefore mainly ducted within the framework of the EFSA project Prima occurs with the movement of infested planting material Phacie and the reports are available in the EFSA website (e.g. -
Nematodes As Bioindicators of Soil Food Web
NEMATODES AS BIOINDICATORS OF SOIL FOOD WEB HEALTH IN AGROECOSYSTEMS: A CRITICAL ANALYSIS DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By SHABEG SINGH BRIAR * * * * * The Ohio State University 2007 Dissertation Committee: Professor Parwinder S. Grewal, Adviser Professor Sally A. Miller, Adviser Professor Casey W. Hoy Professor Landon H. Rhodes Approved by Advisers ____________________ ____________________ Plant Pathology Graduate Program Abstract Nematodes occupy a central position in the soil food web occurring at multiple trophic levels and, therefore, have the potential to provide insights into condition of the soil food webs. I hypothesized that differences in management strategies may have differential effects on nematode community structure and soil properties. This hypothesis was tested in three different replicated experiments. In the first study a conventional farming system receiving synthetic inputs was compared with an organically managed system and in the second study four different farming strategies with and without compost application transitioning to organic management were compared for nematode communities and soil characteristics including soil bulk density, organic matter, microbial biomass and mineral-N. The third study was aimed at assessing the indicative value of various nematode measures in five habitats. Nematode food webs were analyzed for trophic group abundance and by calculating MI, and enrichment (EI), structure (SI) and channel indices (CI) based on weighted abundance of c-p (colonizer-persister) guilds. Bacterivore nematodes were more abundant in the organic than the conventional whereas the conventional system had higher population of the root lesion nematode, Pratylenchus crenatus compared with organic system. -
ÜRETİM ALANLARINDA KÖK-UR NEMATODLARI (Meloidogyne Spp.)’NIN DURUMU
i EGE ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ (YÜKSEK LİSANS TEZİ) ÖDEMİŞ VE KİRAZ (İZMİR) İLÇELERİNDE TURŞULUK HIYAR (Cucumis sativus L.) ÜRETİM ALANLARINDA KÖK-UR NEMATODLARI (Meloidogyne spp.)’NIN DURUMU Esmeray CAFARLI Tez Danışmanı : Doç. Dr. Galip KAŞKAVALCI Bitki Koruma Anabilim Dalı Bilim Dalı Kodu : 501.02.01 Sunuş Tarihi: 12.02.2013 Bornova-İZMİR 2013 ii iii Esmeray CAFARLI tarafından Yüksek Lisans tezi olarak sunulan “Ödemiş ve Kiraz (İzmir) İlçelerinde Turşuluk Hıyar (Cucumis sativus L.) Üretim Alanlarında Kök-Ur Nematodları (Meloidogyne spp.)’nın Durumu” baĢlıklı bu çalıĢma E.Ü. Lisansüstü Eğitim ve Öğretim Yönergesi’nin ilgili hükümleri uyarınca tarafımızdan değerlendirilerek savunmaya değer bulunmuĢ ve 12/02/2013 tarihinde yapılan tez savunma sınavında aday oybirliği/oyçokluğu ile baĢarılı bulunmuĢtur. Jüri üyeleri: İmza Jüri Başkanı : Doç. Dr. Galip KAġKAVALCI ……………………. Raportör üye : Doç. Dr. Ferit TURANLI ……………………. Üye : Prof. Dr. Dursun Eġ ĠYOK ……………………. iv v ÖZET ÖDEMİŞ VE KİRAZ (İZMİR) İLÇELERİNDE TURŞULUK HIYAR (Cucumis sativus L.) ÜRETİM ALANLARINDA KÖK-UR NEMATODLARI (Meloidogyne spp.)’NIN DURUMU CAFARLI, Esmeray Yüksek Lisans Tezi, Bitki Koruma Anabilim Dalı Tez Yöneticisi: Doç. Dr. Galip KAġKAVALCI ġubat 2013, 66 sayfa Bu çalıĢmanın amacı, Ġzmir Ġli ÖdemiĢ ve Kiraz ilçeleri turĢuluk hıyar üretimi yapılan tarlalarda bulunan kök-ur nematodlarının yayılıĢ ve bulaĢıklık oranları ile türlerinin saptanmasıdır. AraĢtırmanın materyalini, ÖdemiĢ ve Kiraz ilçeleri tarlarından alınan, kök-ur nematodu ile bulaĢık bitki materyali oluĢturmuĢtur. ÖdemiĢ Ġlçesi’nde 13 köydeki 62 tarladan, Kiraz Ġlçesi’nde ise 11 köydeki 34 tarladan bitki kök örnekleri alınıp, kökler 0-10 bulaĢıklık ıskalasına göre değerlendirilmiĢtir. YayılıĢ ve bulaĢıklık tespiti çalıĢmaları neticesinde; kök-ur nematodları ile bulaĢıklığın ÖdemiĢ Ġlçesi tarlarında % 17,74, Kiraz’da ise % 17,65 oranlarında olduğu saptanmıĢtır. -
Review on Nematode Molecular Diagnostics: from Bands to Barcodes
Journal of Biology, Agriculture and Healthcare www.iiste.org ISSN 2224-3208 (Paper) ISSN 2225-093X (Online) Vol.4, No.27, 2014 Review on Nematode Molecular Diagnostics: From Bands to Barcodes Alemu Nega Department of Horticulture and Plant Science, Jimma University, P. O. Box 307, Jimma, Ethiopia Email Address: [email protected] Abstract Molecular methods of identification provide accurate, reliable diagnostic approaches for the identification of plant-parasitic nematodes. The promising and attractive results have generated increasing demands for applications in new fields and for better performing techniques. Initially, the techniques were used solely for taxonomic purposes, but increasingly became popular as a component of diagnostic information. Diagnostic procedures are now available to differentiate the plant-pathogenic species from related but non-pathogenic species. The microscopic size of plant parasitic nematodes poses problems and techniques have been developed to enrich samples to obtain qualitative and quantitative information on individual species. In addition, techniques are available to evaluate single nematodes, cysts or eggs of individual species in extracts from soil and plant tissue. DNA or RNA-based techniques are the most widely used approaches for identification, taxonomy and phylogenetic studies, although the development and use of other methods has been, and in some cases still is, important. DNA barcoding and the extraction of DNA from preserved specimens will aid considerably in diagnostic information. In addition, further review is needed to identify all recovered nematode and evaluation of promising treatments for use in integrated disease management strategy to manage not only regulated species such as the potato cyst nematodes Globodera rostochiensis and Globodera pallida, and root-knot nematode Meloidogyne. -
Distribution of Meloidogyne Species in Carrot in Brazil
Ciência Rural, Santa Maria, v.51:5,Distribution e20200552, of Meloidogyne 2021 species in carrot in Brazil. http://doi.org/10.1590/0103-8478cr202005521 ISSNe 1678-4596 CROP PROTECTION Distribution of Meloidogyne species in carrot in Brazil Tiago Garcia da Cunha1 Liliane Evangelista Visôtto1 Letícia Mendes Pinheiro1 Pedro Ivo Vieira Good God1 Juliana Magrinelli Osório Rosa2 Cláudio Marcelo Gonçalves Oliveira2 Everaldo Antônio Lopes1* 1Universidade Federal de Viçosa (UFV), Campus Rio Paranaíba, 38810-000, Rio Paranaíba, MG, Brasil. E-mail: [email protected]. *Corresponding author. 2Instituto Biológico, Campinas, SP, Brasil. ABSTRACT: Root-knot nematodes (RKN – Meloidogyne spp.) are one of the most serious threats to carrot production worldwide. In Brazil, carrots are grown throughout the year, and economic losses due to RKN are reported. Since little is known on the distribution of RKN species in carrot fields in Brazil, we collected plant and soil samples from 35 fields across six states. Based on the morphology of perineal patterns, esterase phenotypes and species-specific PCR, three Meloidogyne species were identified: 60% of the fields were infested with Meloidogyne incognita, M. javanica was reported in 42.9% of the areas, whereas M. hapla was detected in 17.1% of carrot fields. Mixed populations were reported in 20% of the areas with a predominance of M. incognita + M. javanica. The combination of morphological, biochemical, and molecular techniques is a useful approach to identify RKN species. Key words: Daucus carota, integrative taxonomy, isozyme phenotypes, species-specific PCR. Distribuição de espécies de Meloidogyne em cenoura no Brasil RESUMO: Os nematoides-das-galhas (RKN - Meloidogyne spp.) são uma das mais sérias ameaças à produção de cenoura no mundo. -
JOURNAL of NEMATOLOGY First Report of Paratylenchus
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-110 e2020-110 | Vol. 52 First report of Paratylenchus lepidus Raski, 1975 associated with green tea (Camellia sinensis (L.) Kuntze) in Vietnam Thi Mai Linh Le1, 2, Huu Tien Nguyen1,2,3,*, Thi Duyen Nguyen1, 2,* and Quang Phap Trinh1, 2 Abstract 1Institute of Ecology and Biological The pin nematodes, Paratylenchus spp., are relatively small Resources, Vietnam Academy nematodes that can feed on a wide range of host plants. The of Sciences and Technology, morphological identification of this nematode is greatly hampered 18 Hoang Quoc Viet, Cau Giay, by their small size and variable characters. This study provides the 100000, Hanoi, Vietnam. first report ofParatylenchus lepidus from Vietnam with a combination of morphological and molecular characterizations. The 28S rDNA 2Graduate University of Science phylogenetic tree of the genus and the first COI mtDNA barcode of and Technology, Vietnam Academy this species are also provided. of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000, Hanoi, Vietnam. Keywords 28S rDNA, COI mtDNA, DNA barcode, Plant-parasitic nematodes, 3 Nematology Research Unit, Taxonomy. Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000, Ghent, Belgium. *E-mails: tien.quelampb@gmail. com; [email protected] This paper was edited by Zafar Ahmad Handoo. Received for publication August 3, 2020. The genus Paratylenchus (Ciobanu et al., 2003) the identification process, which make the molecular is commonly known as pin nematodes that are approach to become more popular in recent studies of ectoparasites and can be frequently found at high pin nematodes. In Vietnam, 16 Paratylenchus species density in perennial plants, hop gardens, orchards, have been reported without molecular data, including or forest trees (Ghaderi et al., 2016; Ghaderi, 2019). -
Meloidogyne Chitwoodi
EPPO quarantine pest Data Sheets on Quarantine Pests Meloidogyne chitwoodi IDENTITY Name:Meloidogyne chitwoodi Golden, O'Bannon, Santo & Finley Taxonomic position: Nematoda: Meloidogynidae Common names: Columbia root-knot nematode (English) Nématode cécidogène du Columbia (French) Bayer computer code: MELGCH EPPO A2 list: No. 227 HOSTS M. chitwoodi has a wide host range among several plant families (Santo et al., 1980; O'Bannon et al., 1982), including crop plants and common weed species. Potatoes (Solanum tuberosum) and tomatoes (Lycopersicon esculentum) are good hosts, while barley (Hordeum vulgare), maize (Zea mays), oats (Avena sativa), sugarbeet (Beta vulgaris var. saccharifera), wheat (Triticum aestivum) and various Poaceae (grasses and weeds) will maintain the nematode. Moderate to poor hosts occur in the Brassicaceae, Cucurbitaceae, Fabaceae, Lamiaceae, Liliaceae, Umbelliferae and Vitaceae. Capsicum annuum and tobacco (Nicotiana tabacum and N. rustica) are not hosts of M. chitwoodi. Lucerne (Medicago sativa) is a good host for race 2 but not for race 1, whereas carrots (Daucus carota) are a non-host for race 2 but a good host for race 1. Ferris et al. (1994), investigating suitable crops for rotation with potato in the presence of race 1 in USA, recommend Amaranthus, lucerne, rape (Brassica napus var. oleifera), Raphanus sativus var. oleifera and safflower (Carthamus tinctorius). In the Netherlands, host crops recorded to be attacked by M. chitwoodi are carrots, cereals, maize, peas (Pisum sativum), Phaseolus vulgaris, potatoes, Scorzonera hispanica, sugarbeet and tomatoes (OEPP/EPPO, 1991). GEOGRAPHICAL DISTRIBUTION M. chitwoodi was first described from the Pacific Northwest of the USA in 1980, its common name deriving from the Columbia River between Oregon and Washington states.