DOCSLIB.ORG

Modeling Spatial Covariance Functions Inkyung Choi Purdue University

Total Page：16

File Type：pdf, Size：1020Kb

Download full-text PDF Read full-text
Modeling Spatial Covariance Functions Inkyung Choi Purdue University Purdue University Purdue e-Pubs Open Access Dissertations Theses and Dissertations Summer 2014 Modeling spatial covariance functions InKyung Choi Purdue University Follow this and additional works at: https://docs.lib.purdue.edu/open_access_dissertations Part of the Applied Statistics Commons Recommended Citation Choi, InKyung, "Modeling spatial covariance functions" (2014). Open Access Dissertations. 246. https://docs.lib.purdue.edu/open_access_dissertations/246 This document has been made available through Purdue e-Pubs, a service of the Purdue University Libraries. Please contact [email protected] for additional information. *UDGXDWH6FKRRO(7')RUP 5HYLVHG 0114 PURDUE UNIVERSITY GRADUATE SCHOOL Thesis/Dissertation Acceptance 7KLVLVWRFHUWLI\WKDWWKHWKHVLVGLVVHUWDWLRQSUHSDUHG %\ InKyung Choi (QWLWOHG MODELING SPATIAL COVARIANCE FUNCTIONS Doctor of Philosophy )RUWKHGHJUHHRI ,VDSSURYHGE\WKHILQDOH[DPLQLQJFRPPLWWHH Hao Zhang Bo Li Xiao Wang Tonglin Zhang To the best of my knowledge and as understood by the student in the Thesis/Dissertation Agreement, Publication Delay, and Certification/Disclaimer (Graduate School Form 32), this thesis/dissertation adheres to the provisions of Purdue University’s “Policy on Integrity in Research” and the use of copyrighted material. Hao Zhang $SSURYHGE\0DMRU3URIHVVRU V BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB $SSURYHGE\ Rebecca W. Doerge 08/29/2014 +HDGRIWKHDepartment *UDGXDWH3URJUDP 'DWH MODELING SPATIAL COVARIANCE FUNCTIONS A Dissertation Submitted to the Faculty of Purdue University by InKyung Choi In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy December 2014 Purdue University West Lafayette, Indiana ii ACKNOWLEDGMENTS First of all, I want to express my sincere gratitude to my advisor Professor Hao Zhang. He encouraged independent thinking and supported my ideas, which allowed me to freely pursue and explore topics that interested me, and whenever I went astray, his insightful comments put me back on the right track. I am also greatly indebted to Professor Bo Li who had been my advisor for the first three years of the Ph.D. program. I cannot overstate her influence at the beginning of my research in the field of Spatial Statistics. Her extensive knowledge about the field and passion for research had been an inspiration to me. Even after moving to the University of Illinois at Urbana-Champaign, she has always taken good care of me and put herself out of the way to support me. I appreciate my committee members; Professor Xiao Wang and Professor Tonglin Zhang for their helpful input and warm encouragement. The support of the Depart- ment of Statistics and the staff members should not go unmentioned for it was only through their consistent help and assistance that I could complete my study. I was fortunate to study at university that hosts a great consulting center like Statistical Consulting Service center. While working at the center, I learnt a great deal about how to apply statistics in practice, knowledge that can not be easily obtained in a classroom. The invaluable experience that I had obtained through working with clients from various fields will be of a great asset for the rest of my professional career and I am thankful for all the professors, colleagues and staff members of the center, and especially Professor Bruce Craig for his guidance and mentoring. In a seemingly endless fight with oneself and facing the battle all alone in a foreign country, I often found facets of myself that I had never truly realized before. Hence the last five years has not only been about the pursuit of academic knowledge but also a journey to understand myself, and perhaps the world around me as well. My friends iii both inside and outside the department have been wonderful companions along the journey and I'm grateful to them for being good friends and teachers during the important time of my life. Lastly, I want to thank my family in Korea. Although separated by continents, knowing that I have people who always love and support me without condition gave me strength and courage to go on even in the darkest night. I'm forever indebted for their unwavering devotion which is the true force that has shaped who I am now. iv TABLE OF CONTENTS Page LIST OF TABLES :::::::::::::::::::::::::::::::: vi LIST OF FIGURES ::::::::::::::::::::::::::::::: vii ABSTRACT ::::::::::::::::::::::::::::::::::: viii 1 INTRODUCTION :::::::::::::::::::::::::::::: 1 1.1 Motivation :::::::::::::::::::::::::::::::: 1 1.2 Preliminaries :::::::::::::::::::::::::::::: 2 1.2.1 Covariance function of random fields ::::::::::::: 2 1.2.2 Spectral representation of stationary covariance functions :: 4 1.2.3 Some nonstationary covariance functions ::::::::::: 5 1.2.4 Spatial random effect model :::::::::::::::::: 6 1.3 Overview ::::::::::::::::::::::::::::::::: 8 2 NONPARAMETRIC COVARIANCE ESTIMATION ::::::::::: 9 2.1 Introduction ::::::::::::::::::::::::::::::: 9 2.2 Nonparametric Covariance Estimation :::::::::::::::: 12 2.2.1 Construction of completely monotone function :::::::: 12 2.2.2 Estimation :::::::::::::::::::::::::::: 14 2.3 Extension to Space-Time Covariance Function :::::::::::: 17 2.4 Simulation Study :::::::::::::::::::::::::::: 19 2.4.1 Simulation set up :::::::::::::::::::::::: 20 2.4.2 Number of knots and order of B-splines :::::::::::: 21 2.4.3 Comparison with parametric models ::::::::::::: 22 2.4.4 Simulation with space-time covariance function ::::::: 25 2.5 Two Data Examples :::::::::::::::::::::::::: 27 2.5.1 Indiana July mean temperature data ::::::::::::: 27 2.5.2 Irish wind data ::::::::::::::::::::::::: 29 2.6 Conclusion :::::::::::::::::::::::::::::::: 33 3 ANALYSIS OF TELECONNECTION ::::::::::::::::::: 35 3.1 Introduction ::::::::::::::::::::::::::::::: 35 3.2 ENSO Teleconnection to North America ::::::::::::::: 38 3.3 Model for Time-varying Teleconnection :::::::::::::::: 42 3.3.1 Model :::::::::::::::::::::::::::::: 43 3.3.2 Estimation :::::::::::::::::::::::::::: 45 v Page 3.3.3 Empirical confidence interval for covariance of spatial random effect ::::::::::::::::::::::::::::::: 48 3.4 Data Analysis :::::::::::::::::::::::::::::: 50 3.4.1 Teleconnection analysis ::::::::::::::::::::: 50 3.4.2 Spatial prediction :::::::::::::::::::::::: 57 3.5 Conclusion :::::::::::::::::::::::::::::::: 63 REFERENCES :::::::::::::::::::::::::::::::::: 65 VITA ::::::::::::::::::::::::::::::::::::::: 70 vi LIST OF TABLES Table Page 2.1 Mean and standard error (in parenthesis) of integrated squared error (ISE) and mean squared prediction error (MSPE) of nonparametric model at different knot number m and order of B-splines p (unit: 10−2). :::: 23 2.2 Mean and standard error (in parenthesis) of integrated squared error (ISE) and mean squared prediction error (MSPE) of three parametric models (spherical, Mat´ernand Gaussian) and the nonparametric model (with or- der of B-splines p = 3 and knot number m = 5), together with the MSPE of true covariance model (unit: 10−2). :::::::::::::::::: 24 2.3 Mean and standard error (in parenthesis) of integrated squared error (ISE) and mean squared prediction error (MSPE) of the nonparametric space- time covariance model at different knot number (mφ; m ) and order of B-splines (pφ; p ) and of the parametric models (unit: 10−2). :::::: 26 2.4 Mean squared prediction error (MSPE) of one-day ahead prediction of Irish wind data. ::::::::::::::::::::::::::::::: 32 3.1 Mean of mean squared prediction error (MSPE) and logarithm score (LogS) of prediction based 1) Two regions : uses both North America data and Ni~no3region data; and 2) One region : uses data from the same region as the region of the dropped-site ::::::::::::::::::::::: 63 vii LIST OF FIGURES Figure Page [q] 2.1 Example of functions ffj : j = 1; : : : ; m + pg for m = 2 and p = 3, [q] and two covariance functions constructed based on those fj : C1(h) = [2] 2 [2] 2 [2] 2 [2] 2 5f1 (h ) + 0:5f5 (h ) and C2(h) = 0:7f3 (h ) + 0:1f4 (h ). ::::::: 15 2.2 86 weather stations in Indiana with July 2011 mean temperatures, together with temperature surface interpolated using the fitted nonparametric co- variance function :::::::::::::::::::::::::::::: 28 2.3 Emprical covariance estimates (dots) and fitted covariance functions for Indiana July 2011 temperature data (distance unit: 10 km) ::::::: 29 2.4 Empirical covariance estimates (dots) of Irish wind data and fitted non- parametric model (solid line) at four different sets of space-time lags (dis- tance unit: 100 km) :::::::::::::::::::::::::::: 31 3.1 Nino3 region and North America region ::::::::::::::::: 41 3.2 Temporal variation of residual variance (top: Ni~no3region; bottom: North America) before standardization (blue lines) and after the standardization (red lines) :::::::::::::::::::::::::::::::::: 51 3.3 Location of centers of spatial basis functions :::::::::::::: 52 3.4 Estimated covariancesσ ^ij(t) from 1871 to 1990 ::::::::::::: 53 3.5 Estimated covariancesσ ^ij(t) from 1871 to 1990 ::::::::::::: 54 3.6 Estimated covariance σbij(t) for spatial random effects α1; : : : ; α6 :::: 55 3.7 Estimated covariance σbij(t) for spatial random effects α7; : : : ; α12 ::: 56 3.8 Mean and empirical confidence interval of covariances associated with α1; : : : ; α4 :::::::::::::::::::::::::::::::::: 58 3.9 Mean and empirical confidence interval of covariances associated with α6; α7; α8 and α10 :::::::::::::::::::::::::::::: 59 3.10 Squared Frobenius norm of estimated cross-region covariance matrix :: 60 3.11 Location of centers of spatial basis functions
Load more

Recommended publications
  • Stationary Processes and Their Statistical Properties
    Stationary Processes and Their Statistical Properties Brian Borchers March 29, 2001 1 Stationary processes A discrete time stochastic process is a sequence of random variables Z1, Z2, :::. In practice we will typically analyze a single realization z1, z2, :::, zn of the stochastic process and attempt to esimate the statistical properties of the stochastic process from the realization. We will also consider the problem of predicting zn+1 from the previous elements of the sequence. We will begin by focusing on the very important class of stationary stochas- tic processes. A stochastic process is strictly stationary if its statistical prop- erties are unaffected by shifting the stochastic process in time. In particular, this means that if we take a subsequence Zk+1, :::, Zk+m, then the joint distribution of the m random variables will be the same no matter what k is. Stationarity requires that the mean of the stochastic process be a constant. E[Zk] = µ. and that the variance is constant 2 V ar[Zk] = σZ : Also, stationarity requires that the covariance of two elements separated by a distance m is constant. That is, Cov(Zk;Zk+m) is constant. This covariance is called the autocovariance at lag m, and we will use the notation γm. Since Cov(Zk;Zk+m) = Cov(Zk+m;Zk), we need only find γm for m 0. The ≥ correlation of Zk and Zk+m is the autocorrelation at lag m. We will use the notation ρm for the autocorrelation. It is easy to show that γk ρk = : γ0 1 2 The autocovariance and autocorrelation ma- trices The covariance matrix for the random variables Z1, :::, Zn is called an auto- covariance matrix.
    [Show full text]
  • Stochastic Process - Introduction
    Stochastic Process - Introduction • Stochastic processes are processes that proceed randomly in time. • Rather than consider fixed random variables X, Y, etc. or even sequences of i.i.d random variables, we consider sequences X0, X1, X2, …. Where Xt represent some random quantity at time t. • In general, the value Xt might depend on the quantity Xt-1 at time t-1, or even the value Xs for other times s < t. • Example: simple random walk . week 2 1 Stochastic Process - Definition • A stochastic process is a family of time indexed random variables Xt where t belongs to an index set. Formal notation, { t : ∈ ItX } where I is an index set that is a subset of R. • Examples of index sets: 1) I = (-∞, ∞) or I = [0, ∞]. In this case Xt is a continuous time stochastic process. 2) I = {0, ±1, ±2, ….} or I = {0, 1, 2, …}. In this case Xt is a discrete time stochastic process. • We use uppercase letter {Xt } to describe the process. A time series, {xt } is a realization or sample function from a certain process. • We use information from a time series to estimate parameters and properties of process {Xt }. week 2 2 Probability Distribution of a Process • For any stochastic process with index set I, its probability distribution function is uniquely determined by its finite dimensional distributions. •The k dimensional distribution function of a process is defined by FXX x,..., ( 1 x,..., k ) = P( Xt ≤ 1 ,..., xt≤ X k) x t1 tk 1 k for anyt 1 ,..., t k ∈ I and any real numbers x1, …, xk .
    [Show full text]
  • Autocovariance Function Estimation Via Penalized Regression
    Autocovariance Function Estimation via Penalized Regression Lina Liao, Cheolwoo Park Department of Statistics, University of Georgia, Athens, GA 30602, USA Jan Hannig Department of Statistics and Operations Research, University of North Carolina, Chapel Hill, NC 27599, USA Kee-Hoon Kang Department of Statistics, Hankuk University of Foreign Studies, Yongin, 449-791, Korea Abstract The work revisits the autocovariance function estimation, a fundamental problem in statistical inference for time series. We convert the function estimation problem into constrained penalized regression with a generalized penalty that provides us with flexible and accurate estimation, and study the asymptotic properties of the proposed estimator. In case of a nonzero mean time series, we apply a penalized regression technique to a differenced time series, which does not require a separate detrending procedure. In penalized regression, selection of tuning parameters is critical and we propose four different data-driven criteria to determine them. A simulation study shows effectiveness of the tuning parameter selection and that the proposed approach is superior to three existing methods. We also briefly discuss the extension of the proposed approach to interval-valued time series. Some key words: Autocovariance function; Differenced time series; Regularization; Time series; Tuning parameter selection. 1 1 Introduction Let fYt; t 2 T g be a stochastic process such that V ar(Yt) < 1, for all t 2 T . The autoco- variance function of fYtg is given as γ(s; t) = Cov(Ys;Yt) for all s; t 2 T . In this work, we consider a regularly sampled time series f(i; Yi); i = 1; ··· ; ng. Its model can be written as Yi = g(i) + i; i = 1; : : : ; n; (1.1) where g is a smooth deterministic function and the error is assumed to be a weakly stationary 2 process with E(i) = 0, V ar(i) = σ and Cov(i; j) = γ(ji − jj) for all i; j = 1; : : : ; n: The estimation of the autocovariance function γ (or autocorrelation function) is crucial to determine the degree of serial correlation in a time series.
    [Show full text]
  • Covariances of ARMA Models
    Statistics 910, #9 1 Covariances of ARMA Processes Overview 1. Review ARMA models: causality and invertibility 2. AR covariance functions 3. MA and ARMA covariance functions 4. Partial autocorrelation function 5. Discussion Review of ARMA processes ARMA process A stationary solution fXtg (or if its mean is not zero, fXt − µg) of the linear difference equation Xt − φ1Xt−1 − · · · − φpXt−p = wt + θ1wt−1 + ··· + θqwt−q φ(B)Xt = θ(B)wt (1) 2 where wt denotes white noise, wt ∼ WN(0; σ ). Definition 3.5 adds the • identifiability condition that the polynomials φ(z) and θ(z) have no zeros in common and the • normalization condition that φ(0) = θ(0) = 1. Causal process A stationary process fXtg is said to be causal if there ex- ists a summable sequence (some require square summable (`2), others want more and require absolute summability (`1)) sequence f jg such that fXtg has the one-sided moving average representation 1 X Xt = jwt−j = (B)wt : (2) j=0 Proposition 3.1 states that a stationary ARMA process fXtg is causal if and only if (iff) the zeros of the autoregressive polynomial Statistics 910, #9 2 φ(z) lie outside the unit circle (i.e., φ(z) 6= 0 for jzj ≤ 1). Since φ(0) = 1, φ(z) > 0 for jzj ≤ 1. (The unit circle in the complex plane consists of those x 2 C for which jzj = 1; the closed unit disc includes the interior of the unit circle as well as the circle; the open unit disc consists of jzj < 1.) If the zeros of φ(z) lie outside the unit circle, then we can invert each Qp of the factors (1 − B=zj) that make up φ(B) = j=1(1 − B=zj) one at a time (as when back-substituting in the derivation of the AR(1) representation).
    [Show full text]
  • Covariance Functions
    C. E. Rasmussen & C. K. I. Williams, Gaussian Processes for Machine Learning, the MIT Press, 2006, ISBN 026218253X. c 2006 Massachusetts Institute of Technology. www.GaussianProcess.org/gpml Chapter 4 Covariance Functions We have seen that a covariance function is the crucial ingredient in a Gaussian process predictor, as it encodes our assumptions about the function which we wish to learn. From a slightly different viewpoint it is clear that in supervised learning the notion of similarity between data points is crucial; it is a basic similarity assumption that points with inputs x which are close are likely to have similar target values y, and thus training points that are near to a test point should be informative about the prediction at that point. Under the Gaussian process view it is the covariance function that defines nearness or similarity. An arbitrary function of input pairs x and x0 will not, in general, be a valid valid covariance covariance function.1 The purpose of this chapter is to give examples of some functions commonly-used covariance functions and to examine their properties. Section 4.1 defines a number of basic terms relating to covariance functions. Section 4.2 gives examples of stationary, dot-product, and other non-stationary covariance functions, and also gives some ways to make new ones from old. Section 4.3 introduces the important topic of eigenfunction analysis of covariance functions, and states Mercer’s theorem which allows us to express the covariance function (under certain conditions) in terms of its eigenfunctions and eigenvalues. The covariance functions given in section 4.2 are valid when the input domain X is a subset of RD.
    [Show full text]
  • Lecture 1: Stationary Time Series∗
    Lecture 1: Stationary Time Series∗ 1 Introduction If a random variable X is indexed to time, usually denoted by t, the observations {Xt, t ∈ T} is called a time series, where T is a time index set (for example, T = Z, the integer set). Time series data are very common in empirical economic studies. Figure 1 plots some frequently used variables. The upper left figure plots the quarterly GDP from 1947 to 2001; the upper right figure plots the the residuals after linear-detrending the logarithm of GDP; the lower left figure plots the monthly S&P 500 index data from 1990 to 2001; and the lower right figure plots the log difference of the monthly S&P. As you could see, these four series display quite different patterns over time. Investigating and modeling these different patterns is an important part of this course. In this course, you will find that many of the techniques (estimation methods, inference proce- dures, etc) you have learned in your general econometrics course are still applicable in time series analysis. However, there are something special of time series data compared to cross sectional data. For example, when working with cross-sectional data, it usually makes sense to assume that the observations are independent from each other, however, time series data are very likely to display some degree of dependence over time. More importantly, for time series data, we could observe only one history of the realizations of this variable. For example, suppose you obtain a series of US weekly stock index data for the last 50 years.
    [Show full text]
  • Lecture 5: Gaussian Processes & Stationary Processes
    Miranda Holmes-Cerfon Applied Stochastic Analysis, Spring 2019 Lecture 5: Gaussian processes & Stationary processes Readings Recommended: • Pavliotis (2014), sections 1.1, 1.2 • Grimmett and Stirzaker (2001), 8.2, 8.6 • Grimmett and Stirzaker (2001) 9.1, 9.3, 9.5, 9.6 (more advanced than what we will cover in class) Optional: • Grimmett and Stirzaker (2001) 4.9 (review of multivariate Gaussian random variables) • Grimmett and Stirzaker (2001) 9.4 • Chorin and Hald (2009) Chapter 6; a gentle introduction to the spectral decomposition for continuous processes, that gives insight into the link to the spectral decomposition for discrete processes. • Yaglom (1962), Ch. 1, 2; a nice short book with many details about stationary random functions; one of the original manuscripts on the topic. • Lindgren (2013) is a in-depth but accessible book; with more details and a more modern style than Yaglom (1962). We want to be able to describe more stochastic processes, which are not necessarily Markov process. In this lecture we will look at two classes of stochastic processes that are tractable to use as models and to simulat: Gaussian processes, and stationary processes. 5.1 Setup Here are some ideas we will need for what follows. 5.1.1 Finite dimensional distributions Definition. The finite-dimensional distributions (fdds) of a stochastic process Xt is the set of measures Pt1;t2;:::;tk given by Pt1;t2;:::;tk (F1 × F2 × ··· × Fk) = P(Xt1 2 F1;Xt2 2 F2;:::Xtk 2 Fk); k where (t1;:::;tk) is any point in T , k is any integer, and Fi are measurable events in R.
    [Show full text]
  • Introduction to Random Fields and Scale Invariance Hermine Biermé
    Introduction to random fields and scale invariance Hermine Biermé To cite this version: Hermine Biermé. Introduction to random fields and scale invariance. 2017. hal-01493834v2 HAL Id: hal-01493834 https://hal.archives-ouvertes.fr/hal-01493834v2 Preprint submitted on 5 May 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Introduction to random fields and scale invariance Hermine Bierme´ Abstract In medical imaging, several authors have proposed to characterize rough- ness of observed textures by their fractal dimensions. Fractal analysis of 1D signals is mainly based on the stochastic modeling using the famous fractional Brownian motion for which the fractal dimension is determined by its so-called Hurst param- eter. Lots of 2D generalizations of this toy model may be defined according to the scope. This lecture intends to present some of them. After an introduction to random fields, the first part will focus on the construction of Gaussian random fields with prescribed invariance properties such as stationarity, self-similarity, or operator scal- ing property. Sample paths properties such as modulus of continuity and Hausdorff dimension of graphs will be settled in the second part to understand links with frac- tal analysis.
    [Show full text]
  • Basic Properties of the Multivariate Fractional Brownian Motion Pierre-Olivier Amblard, Jean-François Coeurjolly, Frédéric Lavancier, Anne Philippe
    Basic properties of the Multivariate Fractional Brownian Motion Pierre-Olivier Amblard, Jean-François Coeurjolly, Frédéric Lavancier, Anne Philippe To cite this version: Pierre-Olivier Amblard, Jean-François Coeurjolly, Frédéric Lavancier, Anne Philippe. Basic properties of the Multivariate Fractional Brownian Motion. Séminaires et congrès, Société mathématique de France, 2013, 28, pp.65-87. hal-00497639v2 HAL Id: hal-00497639 https://hal.archives-ouvertes.fr/hal-00497639v2 Submitted on 25 Apr 2012 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. BASIC PROPERTIES OF THE MULTIVARIATE FRACTIONAL BROWNIAN MOTION PIERRE-OLIVIER AMBLARD, JEAN-FRANÇOIS COEURJOLLY, FRÉDÉRIC LAVANCIER, AND ANNE PHILIPPE Abstract. This paper reviews and extends some recent results on the multivariate frac- tional Brownian motion (mfBm) and its increment process. A characterization of the mfBm through its covariance function is obtained. Similarly, the correlation and spectral analyses of the increments are investigated. On the other hand we show that (almost) all mfBm’s may be reached as the limit of partial sums of (super)linear processes. Fi- nally, an algorithm to perfectly simulate the mfBm is presented and illustrated by some simulations. 1. Introduction The fractional Brownian motion is the unique Gaussian self-similar process with station- ary increments.
    [Show full text]
  • Mixed Effects Models for Complex Data
    Mixed Effects Models for Complex Data Lang Wu . University of British Columbia Contents 1 Introduction 3 1.1 Introduction 3 1.2 Longitudinal Data and Clustered Data 5 1.3 Some Examples 8 1.3.1 A Study on Mental Distress 8 1.3.2 An AIDS Study 11 1.3.3 A Study on Students’ Performance 14 1.3.4 A Study on Children’s Growth 15 1.4 Regression Models 16 1.4.1 General Concepts and Approaches 16 1.4.2 Regression Models for Cross-Sectional Data 18 1.4.3 Regression Models for Longitudinal Data 22 1.4.4 Regression Models for Survival Data 25 1.5 Mixed Effects Models 26 1.5.1 Motivating Examples 26 1.5.2 LME Models 29 1.5.3 GLMM, NLME, and Frailty Models 31 1.6 Complex or Incomplete Data 32 1.6.1 Missing Data 33 1.6.2 Censoring, Measurement Error, and Outliers 34 1.6.3 Simple Methods 35 1.7 Software 36 1.8 Outline and Notation 37 iii iv MIXED EFFECTS MODELS FOR COMPLEX DATA 2 Mixed Effects Models 41 2.1 Introduction 41 2.2 Linear Mixed Effects (LME) Models 43 2.2.1 Linear Regression Models 43 2.2.2 LME Models 44 2.3 Nonlinear Mixed Effects (NLME) Models 51 2.3.1 Nonlinear Regression Models 51 2.3.2 NLME Models 54 2.4 Generalized Linear Mixed Models (GLMMs) 60 2.4.1 Generalized Linear Models (GLMs) 60 2.4.2 GLMMs 64 2.5 Nonparametric and Semiparametric Mixed Effects Models 68 2.5.1 Nonparametric and Semiparametric Regression Models 68 2.5.2 Nonparametric and Semiparametric Mixed Effects Models 76 2.6 Computational Strategies 80 2.6.1 “Exact” Methods 83 2.6.2 EM Algorithms 85 2.6.3 Approximate Methods 87 2.7 Further Topics 91 2.7.1 Model Selection and
    [Show full text]
  • 2.1 Stochastic Processes and Random Fields
    2 Random Fields 2.1 Stochastic Processes and Random Fields As you read in the Preface, for us a random field is simply a stochastic pro- cess, taking values in a Euclidean space, and defined over a parameter space of dimensionality at least one. Actually, we shall be rather loose about exchang- ing the terms `random field’ and `stochastic process'. In general, we shall use ‘field’ when the geometric structure of the parameter space is important to us, and shall use `process' otherwise. We shall usually denote parameter spaces by either T or M, generally using T when the parameter space is simple Euclidean domain, such as a cube, and M when refering to manifolds, or surfaces. Elements of both T and M will be denoted by t, in a notation harking back to the early days of stochastic processes when the parameter was always one-dimensional `time'. Of course, we have yet to define what a stochastic process is. To do this properly, we should really talk about notions such as probability spaces, mea- surability, separability, and so forth, as we did in RFG. However, we shall send the purist to RFG to read about such things, and here take a simpler route. Definition 2.1.1. Given a parameter space T , a stochastic process f over T is a collection of random variables ff(t): t 2 T g : If T is a set of dimension N, and the random variables f(t) are all vector valued of dimension d, then we call the vector valued random field f a (N; d) random field.
    [Show full text]
  • Fractional Brownian Motion in Finance and Queueing
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Helsingin yliopiston digitaalinen arkisto Fractional Brownian motion in finance and queueing Tommi Sottinen Academic dissertation To be presented, with the premission of the Faculty of Science of the University of Helsinki, for public criticism in Auditorium XIV of the Main Building of the University, on March 29th, 2003, at 10 o’clock a.m. Department of Mathematics Faculty of Science University of Helsinki Helsinki 2003 ISBN 952-91-5653-7 (Paperback) ISBN 952-10-0984-5 (PDF) Yliopistopaino Helsinki 2003 3 Acknowledgements I wish to express my sincere gratitude to my mentor Esko Valkeila for his guidance and for his help on my (unsuccesful) project to go to Jamaica. Thanks are also due to Stefan Geiss and Paavo Salminen for reading the manuscript and for making useful suggestions. My collaborators Yuriy Kozachenko, Esko Valkeila and Olga Vasylyk de- serve my greatest gratitude. Without them I could not have written this thesis. I would like to acknowledge interesting mathematical discussions with Ilkka Norros. I wish to thank Goran Peskir for his hospitality during my days at the University of Aarhus. In general, I would like to acknowledge the friendly atmosphere of the Stochastics group gathered around the Finnish Graduate School in Stochastics. For financial support I am indebted with University of Helsinki, Academy of Finland, Finnish Graduate School in Stochastics and NorFA network “Sto- chastic analysis and its Applications”. I wish to thank my mother for her support. Finally, I would like to thank my companion Saara, who has always been too loving and patient.
    [Show full text]