Evidence for Miocene Overwater Colonization in Caribbean Cyrtognatha Spiders
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Biogeography of the Caribbean Cyrtognatha Spiders Klemen Čandek1,6,7, Ingi Agnarsson2,4, Greta J
www.nature.com/scientificreports OPEN Biogeography of the Caribbean Cyrtognatha spiders Klemen Čandek1,6,7, Ingi Agnarsson2,4, Greta J. Binford3 & Matjaž Kuntner 1,4,5,6 Island systems provide excellent arenas to test evolutionary hypotheses pertaining to gene fow and Received: 23 July 2018 diversifcation of dispersal-limited organisms. Here we focus on an orbweaver spider genus Cyrtognatha Accepted: 1 November 2018 (Tetragnathidae) from the Caribbean, with the aims to reconstruct its evolutionary history, examine Published: xx xx xxxx its biogeographic history in the archipelago, and to estimate the timing and route of Caribbean colonization. Specifcally, we test if Cyrtognatha biogeographic history is consistent with an ancient vicariant scenario (the GAARlandia landbridge hypothesis) or overwater dispersal. We reconstructed a species level phylogeny based on one mitochondrial (COI) and one nuclear (28S) marker. We then used this topology to constrain a time-calibrated mtDNA phylogeny, for subsequent biogeographical analyses in BioGeoBEARS of over 100 originally sampled Cyrtognatha individuals, using models with and without a founder event parameter. Our results suggest a radiation of Caribbean Cyrtognatha, containing 11 to 14 species that are exclusively single island endemics. Although biogeographic reconstructions cannot refute a vicariant origin of the Caribbean clade, possibly an artifact of sparse outgroup availability, they indicate timing of colonization that is much too recent for GAARlandia to have played a role. Instead, an overwater colonization to the Caribbean in mid-Miocene better explains the data. From Hispaniola, Cyrtognatha subsequently dispersed to, and diversifed on, the other islands of the Greater, and Lesser Antilles. Within the constraints of our island system and data, a model that omits the founder event parameter from biogeographic analysis is less suitable than the equivalent model with a founder event. -
(2007) a Photographic Field Guide to the Reptiles and Amphibians Of
A Photographic Field Guide to the Reptiles and Amphibians of Dominica, West Indies Kristen Alexander Texas A&M University Dominica Study Abroad 2007 Dr. James Woolley Dr. Robert Wharton Abstract: A photographic reference is provided to the 21 reptiles and 4 amphibians reported from the island of Dominica. Descriptions and distribution data are provided for each species observed during this study. For those species that were not captured, a brief description compiled from various sources is included. Introduction: The island of Dominica is located in the Lesser Antilles and is one of the largest Eastern Caribbean islands at 45 km long and 16 km at its widest point (Malhotra and Thorpe, 1999). It is very mountainous which results in extremely varied distribution of habitats on the island ranging from elfin forest in the highest elevations, to rainforest in the mountains, to dry forest near the coast. The greatest density of reptiles is known to occur in these dry coastal areas (Evans and James, 1997). Dominica is home to 4 amphibian species and 21 (previously 20) reptile species. Five of these are endemic to the Lesser Antilles and 4 are endemic to the island of Dominica itself (Evans and James, 1997). The addition of Anolis cristatellus to species lists of Dominica has made many guides and species lists outdated. Evans and James (1997) provides a brief description of many of the species and their habitats, but this booklet is inadequate for easy, accurate identification. Previous student projects have documented the reptiles and amphibians of Dominica (Quick, 2001), but there is no good source for students to refer to for identification of these species. -
Cryptic Species Delimitation in the Southern Appalachian Antrodiaetus
Cryptic species delimitation in the southern Appalachian Antrodiaetus unicolor (Araneae: Antrodiaetidae) species complex using a 3RAD approach Lacie Newton1, James Starrett1, Brent Hendrixson2, Shahan Derkarabetian3, and Jason Bond4 1University of California Davis 2Millsaps College 3Harvard University 4UC Davis May 5, 2020 Abstract Although species delimitation can be highly contentious, the development of reliable methods to accurately ascertain species boundaries is an imperative step in cataloguing and describing Earth's quickly disappearing biodiversity. Spider species delimi- tation remains largely based on morphological characters; however, many mygalomorph spider populations are morphologically indistinguishable from each other yet have considerable molecular divergence. The focus of our study, Antrodiaetus unicolor species complex which contains two sympatric species, exhibits this pattern of relative morphological stasis with considerable genetic divergence across its distribution. A past study using two molecular markers, COI and 28S, revealed that A. unicolor is paraphyletic with respect to A. microunicolor. To better investigate species boundaries in the complex, we implement the cohesion species concept and employ multiple lines of evidence for testing genetic exchangeability and ecological interchange- ability. Our integrative approach includes extensively sampling homologous loci across the genome using a RADseq approach (3RAD), assessing population structure across their geographic range using multiple genetic clustering analyses that include STRUCTURE, PCA, and a recently developed unsupervised machine learning approach (Variational Autoencoder). We eval- uate ecological similarity by using large-scale ecological data for niche-based distribution modeling. Based on our analyses, we conclude that this complex has at least one additional species as well as confirm species delimitations based on previous less comprehensive approaches. -
Sexual Selection Research on Spiders: Progress and Biases
Biol. Rev. (2005), 80, pp. 363–385. f Cambridge Philosophical Society 363 doi:10.1017/S1464793104006700 Printed in the United Kingdom Sexual selection research on spiders: progress and biases Bernhard A. Huber* Zoological Research Institute and Museum Alexander Koenig, Adenauerallee 160, 53113 Bonn, Germany (Received 7 June 2004; revised 25 November 2004; accepted 29 November 2004) ABSTRACT The renaissance of interest in sexual selection during the last decades has fuelled an extraordinary increase of scientific papers on the subject in spiders. Research has focused both on the process of sexual selection itself, for example on the signals and various modalities involved, and on the patterns, that is the outcome of mate choice and competition depending on certain parameters. Sexual selection has most clearly been demonstrated in cases involving visual and acoustical signals but most spiders are myopic and mute, relying rather on vibrations, chemical and tactile stimuli. This review argues that research has been biased towards modalities that are relatively easily accessible to the human observer. Circumstantial and comparative evidence indicates that sexual selection working via substrate-borne vibrations and tactile as well as chemical stimuli may be common and widespread in spiders. Pattern-oriented research has focused on several phenomena for which spiders offer excellent model objects, like sexual size dimorphism, nuptial feeding, sexual cannibalism, and sperm competition. The accumulating evidence argues for a highly complex set of explanations for seemingly uniform patterns like size dimorphism and sexual cannibalism. Sexual selection appears involved as well as natural selection and mechanisms that are adaptive in other contexts only. Sperm competition has resulted in a plethora of morpho- logical and behavioural adaptations, and simplistic models like those linking reproductive morphology with behaviour and sperm priority patterns in a straightforward way are being replaced by complex models involving an array of parameters. -
Transcriptome Characterization of the Aptostichus Atomarius Species Complex Nicole L
Garrison et al. BMC Evolutionary Biology (2020) 20:68 https://doi.org/10.1186/s12862-020-01606-7 RESEARCH ARTICLE Open Access Shifting evolutionary sands: transcriptome characterization of the Aptostichus atomarius species complex Nicole L. Garrison1*, Michael S. Brewer2 and Jason E. Bond3 Abstract Background: Mygalomorph spiders represent a diverse, yet understudied lineage for which genomic level data has only recently become accessible through high-throughput genomic and transcriptomic sequencing methods. The Aptostichus atomarius species complex (family Euctenizidae) includes two coastal dune endemic members, each with inland sister species – affording exploration of dune adaptation associated patterns at the transcriptomic level. We apply an RNAseq approach to examine gene family conservation across the species complex and test for patterns of positive selection along branches leading to dune endemic species. Results: An average of ~ 44,000 contigs were assembled for eight spiders representing dune (n = 2), inland (n = 4), and atomarius species complex outgroup taxa (n = 2). Transcriptomes were estimated to be 64% complete on average with 77 spider reference orthologs missing from all taxa. Over 18,000 orthologous gene clusters were identified within the atomarius complex members, > 5000 were detected in all species, and ~ 4700 were shared between species complex members and outgroup Aptostichus species. Gene family analysis with the FUSTr pipeline identified 47 gene families appearing to be under selection in the atomarius ingroup; four of the five top clusters include sequences strongly resembling other arthropod venom peptides. The COATS pipeline identified six gene clusters under positive selection on branches leading to dune species, three of which reflected the preferred species tree. -
COMUNIDAD DE ARAÑAS ORBITELARES (Araneae: Orbiculariae) ASOCIADA AL BOSQUE ALTOANDINO DEL SANTUARIO FLORA Y FAUNA GALERAS, NARIÑO, COLOMBIA*
BOLETÍN CIENTÍFICO ISSN 0123 - 3068 bol.cient.mus.hist.nat. 13 (1): 114 - 126 CENTRO DE MUSEOS MUSEO DE HISTORIA NATURAL COMUNIDAD DE ARAÑAS ORBITELARES (Araneae: Orbiculariae) ASOCIADA AL BOSQUE ALTOANDINO DEL SANTUARIO FLORA Y FAUNA GALERAS, NARIÑO, COLOMBIA* Martha I. Romo1 y Eduardo Flórez2 Resumen Este estudio tiene como objetivo analizar la composición, diversidad y abundancia de arañas orbitelares en tres hábitats aledaños a la Laguna Negra, Santuario de Flora y Fauna Galeras, correspondientes a Bosque, Arbustal y Pastizal, identificándose en cada uno de ellos los microhábitats y estratos vegetales ocupados por las arañas orbitelares para la ubicación de sus telas y refugios. La araneofauna orbitelar fue muestreada manualmente mediante la técnica “revelado de telas”, que consiste en espolvorear la vegetación con harina para visualizar los hilos; y estuvo conformada por tres familias: Araneidae, Tetragnathidae y Uloboridae, distribuidas en 6 géneros, siendo Chrysometa el dominante. Se detectó además que los hábitats de Arbustal y Pastizal comparten el 77% del total de las especies registradas, indicando más de una comunidad de arañas orbitelares en más de un tipo fisionómico de la vegetación. En cuanto a los estratos, se encontró que el bajo y medio poseen el mayor número de individuos, esto al parecer por la amplia disponibilidad de recursos físicos que les brinda la vegetación para la construcción de las telas. Concluyendo, finalmente, que los principales factores que pueden influir en la distribución y diversidad de la araneofauna orbitelar estudiada, son la diversidad y abundancia de soportes estructurales en la vegetación y la disponibilidad de alimento. Palabras clave: Arañas, abundancia, estructura vegetal, telas orbiculares. -
Howard Associate Professor of Natural History and Curator Of
INGI AGNARSSON PH.D. Howard Associate Professor of Natural History and Curator of Invertebrates, Department of Biology, University of Vermont, 109 Carrigan Drive, Burlington, VT 05405-0086 E-mail: [email protected]; Web: http://theridiidae.com/ and http://www.islandbiogeography.org/; Phone: (+1) 802-656-0460 CURRICULUM VITAE SUMMARY PhD: 2004. #Pubs: 138. G-Scholar-H: 42; i10: 103; citations: 6173. New species: 74. Grants: >$2,500,000. PERSONAL Born: Reykjavík, Iceland, 11 January 1971 Citizenship: Icelandic Languages: (speak/read) – Icelandic, English, Spanish; (read) – Danish; (basic) – German PREPARATION University of Akron, Akron, 2007-2008, Postdoctoral researcher. University of British Columbia, Vancouver, 2005-2007, Postdoctoral researcher. George Washington University, Washington DC, 1998-2004, Ph.D. The University of Iceland, Reykjavík, 1992-1995, B.Sc. PROFESSIONAL AFFILIATIONS University of Vermont, Burlington. 2016-present, Associate Professor. University of Vermont, Burlington, 2012-2016, Assistant Professor. University of Puerto Rico, Rio Piedras, 2008-2012, Assistant Professor. National Museum of Natural History, Smithsonian Institution, Washington DC, 2004-2007, 2010- present. Research Associate. Hubei University, Wuhan, China. Adjunct Professor. 2016-present. Icelandic Institute of Natural History, Reykjavík, 1995-1998. Researcher (Icelandic invertebrates). Institute of Biology, University of Iceland, Reykjavík, 1993-1994. Research Assistant (rocky shore ecology). GRANTS Institute of Museum and Library Services (MA-30-19-0642-19), 2019-2021, co-PI ($222,010). Museums for America Award for infrastructure and staff salaries. National Geographic Society (WW-203R-17), 2017-2020, PI ($30,000). Caribbean Caves as biodiversity drivers and natural units for conservation. National Science Foundation (IOS-1656460), 2017-2021: one of four PIs (total award $903,385 thereof $128,259 to UVM). -
Preliminary Checklist of Extant Endemic Species and Subspecies of the Windward Dutch Caribbean (St
Preliminary checklist of extant endemic species and subspecies of the windward Dutch Caribbean (St. Martin, St. Eustatius, Saba and the Saba Bank) Authors: O.G. Bos, P.A.J. Bakker, R.J.H.G. Henkens, J. A. de Freitas, A.O. Debrot Wageningen University & Research rapport C067/18 Preliminary checklist of extant endemic species and subspecies of the windward Dutch Caribbean (St. Martin, St. Eustatius, Saba and the Saba Bank) Authors: O.G. Bos1, P.A.J. Bakker2, R.J.H.G. Henkens3, J. A. de Freitas4, A.O. Debrot1 1. Wageningen Marine Research 2. Naturalis Biodiversity Center 3. Wageningen Environmental Research 4. Carmabi Publication date: 18 October 2018 This research project was carried out by Wageningen Marine Research at the request of and with funding from the Ministry of Agriculture, Nature and Food Quality for the purposes of Policy Support Research Theme ‘Caribbean Netherlands' (project no. BO-43-021.04-012). Wageningen Marine Research Den Helder, October 2018 CONFIDENTIAL no Wageningen Marine Research report C067/18 Bos OG, Bakker PAJ, Henkens RJHG, De Freitas JA, Debrot AO (2018). Preliminary checklist of extant endemic species of St. Martin, St. Eustatius, Saba and Saba Bank. Wageningen, Wageningen Marine Research (University & Research centre), Wageningen Marine Research report C067/18 Keywords: endemic species, Caribbean, Saba, Saint Eustatius, Saint Marten, Saba Bank Cover photo: endemic Anolis schwartzi in de Quill crater, St Eustatius (photo: A.O. Debrot) Date: 18 th of October 2018 Client: Ministry of LNV Attn.: H. Haanstra PO Box 20401 2500 EK The Hague The Netherlands BAS code BO-43-021.04-012 (KD-2018-055) This report can be downloaded for free from https://doi.org/10.18174/460388 Wageningen Marine Research provides no printed copies of reports Wageningen Marine Research is ISO 9001:2008 certified. -
Tarantulas in the Pacific Northwest1
WSU Puyallup REC PLS-108 Updated July 2003 Tarantulas in the Pacific Northwest1 Tarantulas (Fig. 1) in the Pacific Northwest? Well, maybe not like the hairy monsters of the tropics, but some very interesting "atypical" species do occur here. Our species belong to the family Antrodiaetidae. One of our most common spiders is the folding-door spider, Antrodiaetus pacificus (Simon). It is a fairly large species, females ranging from 11 to 13 millimeters in length, males slightly smaller. They are generally dark brown to almost black in color with the abdomen purplish brown. Males are characterized by their long legs, slim bodies, and three tergites (hardened plates) on the abdomen. Females (Fig. 2) are more robust with only one tergite. These spiders excavate burrows in the soil or in damp, rotten wood, digging with a row of spines on each chelicer, known as a ratellum. The six to ten inch deep vertical shafts are lined with silk. The webbing extends beyond ground level as a short collar of camouflaged silk. The turret’s two sides may be drawn in by the occupant, forming two "doors" which meet in the middle. At night, Antrodiaetus assumes a foraging posture with its pedipalps and first pair of legs just touching the rim of silk at the mouth of the tube. In this position, the folding door spider can readily detect an insect moving above ground. The spider will leap out of its burrow with lightning speed, seize its victim, and drop back down, like a terrorizing Jack-in-the-box. When finished with its meal, it will add the insect's dry, dismembered body to a silk-covered trash pile at the bottom of its burrow. -
Distribution of Spiders in Coastal Grey Dunes
kaft_def 7/8/04 11:22 AM Pagina 1 SPATIAL PATTERNS AND EVOLUTIONARY D ISTRIBUTION OF SPIDERS IN COASTAL GREY DUNES Distribution of spiders in coastal grey dunes SPATIAL PATTERNS AND EVOLUTIONARY- ECOLOGICAL IMPORTANCE OF DISPERSAL - ECOLOGICAL IMPORTANCE OF DISPERSAL Dries Bonte Dispersal is crucial in structuring species distribution, population structure and species ranges at large geographical scales or within local patchily distributed populations. The knowledge of dispersal evolution, motivation, its effect on metapopulation dynamics and species distribution at multiple scales is poorly understood and many questions remain unsolved or require empirical verification. In this thesis we contribute to the knowledge of dispersal, by studying both ecological and evolutionary aspects of spider dispersal in fragmented grey dunes. Studies were performed at the individual, population and assemblage level and indicate that behavioural traits narrowly linked to dispersal, con- siderably show [adaptive] variation in function of habitat quality and geometry. Dispersal also determines spider distribution patterns and metapopulation dynamics. Consequently, our results stress the need to integrate knowledge on behavioural ecology within the study of ecological landscapes. / Promotor: Prof. Dr. Eckhart Kuijken [Ghent University & Institute of Nature Dries Bonte Conservation] Co-promotor: Prf. Dr. Jean-Pierre Maelfait [Ghent University & Institute of Nature Conservation] and Prof. Dr. Luc lens [Ghent University] Date of public defence: 6 February 2004 [Ghent University] Universiteit Gent Faculteit Wetenschappen Academiejaar 2003-2004 Distribution of spiders in coastal grey dunes: spatial patterns and evolutionary-ecological importance of dispersal Verspreiding van spinnen in grijze kustduinen: ruimtelijke patronen en evolutionair-ecologisch belang van dispersie door Dries Bonte Thesis submitted in fulfilment of the requirements for the degree of Doctor [Ph.D.] in Sciences Proefschrift voorgedragen tot het bekomen van de graad van Doctor in de Wetenschappen Promotor: Prof. -
Deep Molecular Divergence in the Absence of Morphological And
MEC1233.fm Page 899 Thursday, March 22, 2001 10:50 AM Molecular Ecology (2001) 10, 899–910 DeepBlackwell Science, Ltd molecular divergence in the absence of morphological and ecological change in the Californian coastal dune endemic trapdoor spider Aptostichus simus J. E. BOND,* M. C. HEDIN,† M. G. RAMIREZ‡ and B. D. OPELL§ *Department of Zoology — Insect Division, Field Museum of Natural History, Roosevelt Road at Lake Shore Drive, Chicago, IL 60605 USA, †Department of Biology, San Diego State University, San Diego, CA 92182 – 4614 USA, ‡Department of Biology, Loyola Marymount University, 7900 Loyola Boulevard, Los Angeles, CA 90045 – 8220 USA, §Department of Biology, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24060 USA Abstract Aptostichus simus is a trapdoor spider endemic to the coastal dunes of central and southern California and, on morphological grounds, is recognized as a single species. Mitochondrial DNA 16S rRNA sequences demonstrate that most populations are fixed for the same haplo- type and that the population haplotypes from San Diego County, Los Angeles County, Santa Rosa Island, and Monterey County are extremely divergent (6 –12%), with estimated separation times ranging from 2 to 6 million years. A statistical cluster analysis of morpho- logical features demonstrates that this genetic divergence is not reflected in anatomical features that might signify ecological differentiation among these lineages. The species status of these divergent populations of A. simus depends upon the species concept utilized. If a time-limited genealogical perspective is employed, A. simus would be separated at the base into two genetically distinct species. This study suggests that species concepts based on morphological distinctiveness, in spider groups with limited dispersal capabilities, probably underestimate true evolutionary diversity. -
A Protocol for Online Documentation of Spider Biodiversity Inventories Applied to a Mexican Tropical Wet Forest (Araneae, Araneomorphae)
Zootaxa 4722 (3): 241–269 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2020 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4722.3.2 http://zoobank.org/urn:lsid:zoobank.org:pub:6AC6E70B-6E6A-4D46-9C8A-2260B929E471 A protocol for online documentation of spider biodiversity inventories applied to a Mexican tropical wet forest (Araneae, Araneomorphae) FERNANDO ÁLVAREZ-PADILLA1, 2, M. ANTONIO GALÁN-SÁNCHEZ1 & F. JAVIER SALGUEIRO- SEPÚLVEDA1 1Laboratorio de Aracnología, Facultad de Ciencias, Departamento de Biología Comparada, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Colonia Copilco el Bajo. C. P. 04510. Del. Coyoacán, Ciudad de México, México. E-mail: [email protected] 2Corresponding author Abstract Spider community inventories have relatively well-established standardized collecting protocols. Such protocols set rules for the orderly acquisition of samples to estimate community parameters and to establish comparisons between areas. These methods have been tested worldwide, providing useful data for inventory planning and optimal sampling allocation efforts. The taxonomic counterpart of biodiversity inventories has received considerably less attention. Species lists and their relative abundances are the only link between the community parameters resulting from a biotic inventory and the biology of the species that live there. However, this connection is lost or speculative at best for species only partially identified (e. g., to genus but not to species). This link is particularly important for diverse tropical regions were many taxa are undescribed or little known such as spiders. One approach to this problem has been the development of biodiversity inventory websites that document the morphology of the species with digital images organized as standard views.