Marine Ecology Progress Series 601:77
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Diatoms Big Significance of Tiny Glass Houses
GENERAL ¨ ARTICLE The Diatoms Big Significance of Tiny Glass Houses Aditi Kale and Balasubramanian Karthick Diatoms are unique microscopic algae having intricate cell walls made up of silica. They are the major phytoplankton in aquatic ecosystems and account for 20–25% of the oxygen release and carbon fixation in the world. Their most charac- teristic features are mechanisms they have evolved to utilize silica. Due to their distinctive adaptations and ecology, they (left) Aditi Kale is a PhD student with the are used in various fields like biomonitoring, paleoecology, Biodiversity and nanotechnology and forensics. Paleobiology group of Agharkar Research Introduction Institute. She is studying the biogeography of Diatoms (Class: Bacillariophyceae) are unique microscopic al- freshwater diatoms in gae containing silica and having distinct geometrical shapes. Western Ghats for her They are unicellular, eukaryotic and photosynthetic organisms. thesis. Their cell size ranges between 5 µm–0.5 mm. They occur in wet (right) Balasubramanian or moist places where photosynthesis is possible. Diatoms are Karthick is Scientist with Biodiversity and either planktonic (free-floating) or benthic (attached to a substra- Paleobiology group of tum) in Nature (Figure 1). The individuals are solitary or some- Agharkar Research times form colonies. Diatoms are mostly non-motile; however, Institute. His interests some benthic diatoms have a specialized raphe system1 that include diatom taxonomy and ecology, microbial secretes mucilage to attach or glide along a surface. They are also biogeography,andaquatic known to form biofilms, i. e., layers of tightly attached cells of ecology. microorganisms. Biofilms are formed on a solid surface and are often surrounded by extra-cellular fluids. -
Limits of Iron Fertilization
LIMITS OF IRON FERTILIZATION Anand Gnanadesikan1, John P. Dunne1 and Irina Marinov2 1: NOAA Geophysical Fluid Dynamics Laboratory, PO Box 308, Princeton, NJ 08542 [email protected], [email protected] 2: Department of Earth, Atmosphere and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, [email protected] ABSTRACT Iron fertilization has been proposed as a cheap, controllable, and environmentally benign method for removing carbon dioxide from the atmosphere. While this is in fact the case in simple, 3-box models of the carbon cycle, more realistic models show that these claims fall short of reality. The fact that the efficiency of iron fertilization depends on the long term fate of the added iron and on the carbon associated with it makes tracking the effects of iron fertilization much more difficult and expensive than has been asserted. Additionally, advection of low nutrient water away from iron-rich areas can result in lowering production remotely, with potentially serious consequences. INTRODUCTION The idea of offsetting anthropogenic carbon dioxide emissions by fertilizing the ocean with iron has a number of superficially attractive features. A host of iron fertilization experiments have demonstrated that adding iron to surface waters leads to a local increase in productivity [see for example Coale et al., 1996]. Our own survey of the literature [Dunne et al. subm.] shows that this should be expected to lead to a local increase in particle export. It is claimed however, that this local increase in particle export would necessarily lead to an easily verifiable drawdown in atmospheric carbon dioxide. It is further claimed that the increase in export is controllable and environmentally benign, implying that the effects cease as soon as the fertilization stops. -
Fertilizing the Ocean with Iron Is This a Viable Way to Help Reduce Carbon Dioxide Levels in the Atmosphere?
380 Fertilizing the Ocean with Iron Is this a viable way to help reduce carbon dioxide levels in the atmosphere? 360 ive me half a tanker of iron, and I’ll give you an ice Twenty years on, Martin’s line is still viewed alternately age” may rank as the catchiest line ever uttered by a as a boast or a quip—an opportunity too good to pass up or a biogeochemist.“G The man responsible was the late John Martin, misguided remedy doomed to backfire. Yet over the same pe- former director of the Moss Landing Marine Laboratory, who riod, unrelenting increases in carbon emissions and mount- discovered that sprinkling iron dust in the right ocean waters ing evidence of climate change have taken the debate beyond could trigger plankton blooms the size of a small city. In turn, academic circles and into the free market. the billions of cells produced might absorb enough heat-trap- Today, policymakers, investors, economists, environ- ping carbon dioxide to cool the Earth’s warming atmosphere. mentalists, and lawyers are taking notice of the idea. A few Never mind that Martin companies are planning new, was only half serious when larger experiments. The ab- 340 he made the remark (in his Ocean Iron Fertilization sence of clear regulations for “best Dr. Strangelove accent,” either conducting experiments he later recalled) at an infor- An argument for: Faced with the huge at sea or trading the results mal seminar at Woods Hole consequences of climate change, iron’s in “carbon offset” markets Oceanographic Institution outsized ability to put carbon into the oceans complicates the picture. -
Synthetic Morphogenesis
Downloaded from http://cshperspectives.cshlp.org/ on September 24, 2021 - Published by Cold Spring Harbor Laboratory Press Synthetic Morphogenesis Brian P. Teague, Patrick Guye, and Ron Weiss Synthetic Biology Center, Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139 Correspondence: [email protected] Throughout biology, function is intimately linked with form. Across scales ranging from subcellular to multiorganismal, the identity and organization of a biological structure’s subunits dictate its properties. The field of molecular morphogenesis has traditionally been concerned with describing these links, decoding the molecular mechanisms that give rise to the shape and structure of cells, tissues, organs, and organisms. Recent advances in synthetic biology promise unprecedented control over these molecular mechanisms; this opens the path to not just probing morphogenesis but directing it. This review explores several frontiers in the nascent field of synthetic morphogenesis, including programmable tissues and organs, synthetic biomaterials and programmable matter, and engineering complex morphogenic systems de novo. We will discuss each frontier’s objectives, current approaches, constraints and challenges, and future potential. hat is the underlying basis of biological 2014). As the mechanistic underpinnings of Wstructure? Speculations were based on these processes are elucidated, opportunities macroscopic observation until the 17th century, arise to use this knowledge to direct mor- when Antonie van Leeuwenhoek and Robert phogenesis toward novel, useful ends. We call Hooke discovered that organisms were com- this emerging field of endeavor “synthetic mor- posed of microscopic cells (Harris 1999), and phogenesis.” Inspired by and based on natural that the size and shape of the cells affected the morphogenic systems, synthetic morphogenesis properties of the structures they formed. -
Brown Algae and 4) the Oomycetes (Water Molds)
Protista Classification Excavata The kingdom Protista (in the five kingdom system) contains mostly unicellular eukaryotes. This taxonomic grouping is polyphyletic and based only Alveolates on cellular structure and life styles not on any molecular evidence. Using molecular biology and detailed comparison of cell structure, scientists are now beginning to see evolutionary SAR Stramenopila history in the protists. The ongoing changes in the protest phylogeny are rapidly changing with each new piece of evidence. The following classification suggests 4 “supergroups” within the Rhizaria original Protista kingdom and the taxonomy is still being worked out. This lab is looking at one current hypothesis shown on the right. Some of the organisms are grouped together because Archaeplastida of very strong support and others are controversial. It is important to focus on the characteristics of each clade which explains why they are grouped together. This lab will only look at the groups that Amoebozoans were once included in the Protista kingdom and the other groups (higher plants, fungi, and animals) will be Unikonta examined in future labs. Opisthokonts Protista Classification Excavata Starting with the four “Supergroups”, we will divide the rest into different levels called clades. A Clade is defined as a group of Alveolates biological taxa (as species) that includes all descendants of one common ancestor. Too simplify this process, we have included a cladogram we will be using throughout the SAR Stramenopila course. We will divide or expand parts of the cladogram to emphasize evolutionary relationships. For the protists, we will divide Rhizaria the supergroups into smaller clades assigning them artificial numbers (clade1, clade2, clade3) to establish a grouping at a specific level. -
Physical, Chemical, and Genetic Techniques for Diatom Frustule Modification: Applications in Nanotechnology
applied sciences Review Physical, Chemical, and Genetic Techniques for Diatom Frustule Modification: Applications in Nanotechnology Alessandra Rogato 1,2 and Edoardo De Tommasi 3,* 1 Institute of Biosciences and Bioresources, National Research Council, Via P. Castellino 111, 80131 Naples, Italy; [email protected] 2 Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, 80121 Naples, Italy; 3 Institute of Applied Sciences and Intelligent Systems, National Research Council, Via P. Castellino 111, 80131 Naples, Italy * Correspondence: [email protected] Received: 29 September 2020; Accepted: 3 December 2020; Published: 6 December 2020 Abstract: Diatom frustules represent one of the most complex examples of micro- and nano-structured materials found in nature, being the result of a biomineralization process refined through tens of milions of years of evolution. They are constituted by an intricate, ordered porous silica matrix which recently found several applications in optoelectronics, sensing, solar light harvesting, filtering, and drug delivery, to name a few. The possibility to modify the composition and the structure of frustules can further broaden the range of potential applications, adding new functions and active features to the material. In the present work the most remarkable physical and chemical techniques aimed at frustule modification are reviewed, also examining the most recent genetic techniques developed for its controlled morphological mutation. Keywords: diatoms; biomaterials; biomineralization; hybrid nanomaterials; surface functionalization; nanotechnologies; sensing; genetic engineering 1. Introduction Many living organisms, from unicellular to multicellular ones (e.g., bacteria, protists, plants, invertebrates and vertebrates), are able to produce minerals to develop peculiar features such as shells, bones, teeth or exoskeleton. -
Ocean Iron Fertilization Experiments – Past, Present, and Future Looking to a Future Korean Iron Fertilization Experiment in the Southern Ocean (KIFES) Project
Biogeosciences, 15, 5847–5889, 2018 https://doi.org/10.5194/bg-15-5847-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 3.0 License. Reviews and syntheses: Ocean iron fertilization experiments – past, present, and future looking to a future Korean Iron Fertilization Experiment in the Southern Ocean (KIFES) project Joo-Eun Yoon1, Kyu-Cheul Yoo2, Alison M. Macdonald3, Ho-Il Yoon2, Ki-Tae Park2, Eun Jin Yang2, Hyun-Cheol Kim2, Jae Il Lee2, Min Kyung Lee2, Jinyoung Jung2, Jisoo Park2, Jiyoung Lee1, Soyeon Kim1, Seong-Su Kim1, Kitae Kim2, and Il-Nam Kim1 1Department of Marine Science, Incheon National University, Incheon 22012, Republic of Korea 2Korea Polar Research Institute, Incheon 21990, Republic of Korea 3Woods Hole Oceanographic Institution, MS 21, 266 Woods Hold Rd., Woods Hole, MA 02543, USA Correspondence: Il-Nam Kim ([email protected]) Received: 2 November 2016 – Discussion started: 15 November 2016 Revised: 16 August 2018 – Accepted: 18 August 2018 – Published: 5 October 2018 Abstract. Since the start of the industrial revolution, hu- providing insight into mechanisms operating in real time and man activities have caused a rapid increase in atmospheric under in situ conditions. To maximize the effectiveness of carbon dioxide (CO2) concentrations, which have, in turn, aOIF experiments under international aOIF regulations in the had an impact on climate leading to global warming and future, we therefore suggest a design that incorporates sev- ocean acidification. Various approaches have been proposed eral components. (1) Experiments conducted in the center of to reduce atmospheric CO2. The Martin (or iron) hypothesis an eddy structure when grazing pressure is low and silicate suggests that ocean iron fertilization (OIF) could be an ef- levels are high (e.g., in the SO south of the polar front during fective method for stimulating oceanic carbon sequestration early summer). -
Gyrodinium Undulans </Emphasis> Hulburt, a Marine Dinoflagellate
HELGOLANDER MEERESUNTERSUCHUNGEN Helgolfinder Meeresunters. 52, 1-14 (199fll Gyrodinium undulans Hulburt, a marine dinoflagellate feeding on the bloom-forming diatom Odontella aurita, and on copepod and rotifer eggs G. Drebes I & E. Schnepf 2 1Biologische Anstalt Hetgoland, Wattenmeerstation Sytt; D-25992 List/Sylt, Germany 2Zeflentehre, Fakultat fur Biologie, Universit~t Heidelberg; lm Neuenheimer Feld 230, D-fig120 Heidelberg, Germany ABSTRACT: The marine dinoflagellate Gyrodinium undulans was discovered as a feeder on the planktonic diatom Odontella aurita. Every year, during winter and early spring, a certain percent- age of cells of this bloom-forming diatom, in the Wadden Sea along the North Sea coast, was regu- larly found affected by the flagellate. Supplied with the food diatom O. aurita the dinoflagellate could be maintained successfully in clonal culture. The vegetative lite cycle was studied, mainly by light microscopy on live material, with special regard to the mode of food uptake. Food is taken up by a so-called phagopod, emerging from the antapex of the flagellate. Only Iluid or tiny prey mate- rial could be transported through the phagopod. Larger organelles like the chloroplasts of Odontefla are not ingested and are left behind in the diatom cell. Thereafter, the detached dinoflagellate re- produces by ceil division, occasionally followed by a second division. As yet, stages of sexual repro- duction and possible formation of resting cysts could not be recognized, neither from wild material nor from laboratory cultures. Palmelloid stages (sometimes with a delicate wall) occurring in ageing cultures may at least partly function as temporary resting stages. The winter species G. -
Architecture and Material Properties of Diatom Shells Provide Effective
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Electronic Publication Information Center letters to nature .............................................................. diameter, respectively (Fig. 1g). Mechanical strength and size were not only inversely related within a single species but also between Architecture and material properties different species: C. granii cells (130 mm diameter) were crushed at of diatom shells provide effective lower forces (up to 90 mN) than T. punctigera. F. kerguelensis frustules (longest axis 30 mm, Fig. 1d, f) broke at 730 mN (Fig. 1g). mechanical protection Assuming that the glass needle pressed on an area of 100 mm2, the pressures resisted ranged between about 1 and 7 N mm22 (equiva- 22 Christian E. Hamm*, Rudolf Merkel†‡, Olaf Springer§, Piotr Jurkojc§, lent to 100–700 tonnes m ). Much the same forces were required Christian Maier†, Kathrin Prechtel† & Victor Smetacek* to break frustules of individual cells of the same species or size group tested, regardless of where they were applied. * Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, A three-dimensional finite element model (FEM) of the F. 27570 Bremerhaven, Germany kerguelensis frustule (Fig. 2a) was constructed to simulate the † Technische Universita¨tMu¨nchen, Physics Department (Biophysics Group E22), glass needle crush tests and to examine the values and distributions 85748 Garching, Germany of stress within the frustule. Loading the FEM of diatom frustules of ‡ Research -
Geoengineering Research Under U.S. Law
Geoengineering Research Under U.S. Law Rob James Pillsbury Winthrop Shaw Pittman LLP Geoengineering: The Legal Challenges of Climate Mitigation LACBA Environmental Law 34th Annual Spring Super Symposium March 18, 2021 2020-21 has been an (involuntary) geoengineering experiment .2020 tied 2016 as the warmest year on record .Less sulfate pollution, more warming (a “reverse volcano”) .CO2 emissions are down, but expected to bounce back with post- pandemic economic activity .“Clean air warms the planet a tiny bit, but it kills a lot fewer people with air pollution.” Legal precursors . Weather modification—permits, practices as well as litigation o 27 OKLA. L. REV. 409 (1973) o Friedrich et al. PNAS (2020) . Studies of hurricane diversion (and accompanying ethical dilemmas) . Geoengineering, adaptation, and climate change . Unspeakable for years? o “[Adaptation is] a kind of laziness, an arrogant faith in our ability to react in time to save our own skin.” Al Gore, EARTH IN THE BALANCE (1992) Legal precursors . Royal Society (2009) and other studies . Bipartisan Policy Center, 2011 (Dole, Daschle, Mitchell, Baker) . Individual experiments . Debates in international forums . But what is the legal framework? . And what are the legal exposures and benefits? Government activity . March 5, 2021 – DOE Secretary Granholm approves $24 million for direct air capture research . Appropriations Act of 2020—$4 million for NOAA’s Office of Oceanic and Atmospheric Research (OAR) to investigate “Earth’s radiation budget” and “solar climate interventions” o NOAA is currently working with Arizona company to advance study of stratosphere . Carbon capture and sequestration tax credit (IRC, 26 U.S.C. § 45Q) . California Low Carbon Fuel Standard (LCFS) . -
Potential of Diatom-Derived Silica for Biomedical Applications
applied sciences Review Mini-Review: Potential of Diatom-Derived Silica for Biomedical Applications Angela Sardo 1,*, Ida Orefice 1, Sergio Balzano 1,2 , Lucia Barra 1 and Giovanna Romano 1,* 1 Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Naples, Italy; ida.orefi[email protected] (I.O.); [email protected] (S.B.); [email protected] (L.B.) 2 Department of Marine Microbiology and Biogeochemistry (MMB), Netherland Institute for Sea Research (NIOZ), Landsdiep 4, 1793 AB Texel, The Netherlands * Correspondence: [email protected] (A.S.); [email protected] (G.R.) Abstract: Diatoms are unicellular eukaryotic microalgae widely distributed in aquatic environments, possessing a porous silica cell wall known as frustule. Diatom frustules are considered as a sustainable source for several industrial applications because of their high biocompatibility and the easiness of surface functionalisation, which make frustules suitable for regenerative medicine and as drug carriers. Frustules are made of hydrated silica, and can be extracted and purified both from living and fossil diatoms using acid treatments or high temperatures. Biosilica frustules have proved to be suitable for biomedical applications, but, unfortunately, they are not officially recognised as safe by governmental food and medical agencies yet. In the present review, we highlight the frustule formation process, the most common purification techniques, as well as advantages and bottlenecks related to the employment of diatom-derived silica for medical purposes, suggesting possible solutions for a large-scale biosilica production. Keywords: biosilica; diatom frustule; sustainable production; drug delivery Citation: Sardo, A.; Orefice, I.; Balzano, S.; Barra, L.; Romano, G. Mini-Review: Potential of Diatom-Derived Silica for Biomedical 1. -
VII EUROPEAN CONGRESS of PROTISTOLOGY in Partnership with the INTERNATIONAL SOCIETY of PROTISTOLOGISTS (VII ECOP - ISOP Joint Meeting)
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/283484592 FINAL PROGRAMME AND ABSTRACTS BOOK - VII EUROPEAN CONGRESS OF PROTISTOLOGY in partnership with THE INTERNATIONAL SOCIETY OF PROTISTOLOGISTS (VII ECOP - ISOP Joint Meeting) Conference Paper · September 2015 CITATIONS READS 0 620 1 author: Aurelio Serrano Institute of Plant Biochemistry and Photosynthesis, Joint Center CSIC-Univ. of Seville, Spain 157 PUBLICATIONS 1,824 CITATIONS SEE PROFILE Some of the authors of this publication are also working on these related projects: Use Tetrahymena as a model stress study View project Characterization of true-branching cyanobacteria from geothermal sites and hot springs of Costa Rica View project All content following this page was uploaded by Aurelio Serrano on 04 November 2015. The user has requested enhancement of the downloaded file. VII ECOP - ISOP Joint Meeting / 1 Content VII ECOP - ISOP Joint Meeting ORGANIZING COMMITTEES / 3 WELCOME ADDRESS / 4 CONGRESS USEFUL / 5 INFORMATION SOCIAL PROGRAMME / 12 CITY OF SEVILLE / 14 PROGRAMME OVERVIEW / 18 CONGRESS PROGRAMME / 19 Opening Ceremony / 19 Plenary Lectures / 19 Symposia and Workshops / 20 Special Sessions - Oral Presentations / 35 by PhD Students and Young Postdocts General Oral Sessions / 37 Poster Sessions / 42 ABSTRACTS / 57 Plenary Lectures / 57 Oral Presentations / 66 Posters / 231 AUTHOR INDEX / 423 ACKNOWLEDGMENTS-CREDITS / 429 President of the Organizing Committee Secretary of the Organizing Committee Dr. Aurelio Serrano