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Department of Botany & the U.S. National Herbarium The Plant Press New Series - Vol. 18 - No. 2 April-June 2015 Collections Spotlight Doing the Pteridophyte Shuffle Extensive Curation Precedes Rapid Imaging By Eric Schuettpelz ith well over a quarter-million among these was a wholesale update to the the pteridophyte collection to serve as specimens, the United States higher-level taxonomic sequence. The past “swing space” during reorganization, W(US) pteridophyte herbarium two decades have witnessed incredible which will also allow for much needed is the largest collection of ferns and lyco- advances in our understanding of the fern decompression of the collection. The phytes in the United States (Moran 2001, tree of life, thanks largely to phylogenetic implementation of the new system was Brittonia 53: 435–436), almost certainly analyses of molecular data but also to spearheaded by Spencer Goyette, Greg the most substantial in the Americas, and careful reconsiderations of morphology. McKee, and Mike Tornabene, with the among the most significant in the world. This has resulted in new circumscrip- assistance of Amanda Grusz, Erin Sigel, Thanks to funding and in-kind support tions of pteridophyte families and genera, and Meghann Toner in carrying out some from the Smithsonian Office of the Chief many of which differ substantially from of the larger moves. Information Officer, the Smithsonian earlier schemes. Reorganizing the pteri- Beyond the wholesale reorganization Digitization Program Office, the Collec- dophyte herbarium to reflect our current of the collection at the family and genus tions Program of the National Museum of understanding of evolutionary relation- levels, we have also been working to Natural History, and the Department of ships makes it more accessible to users consistently apply our regional divisions Botany, a high-resolution image of every and improves our ability to accommodate within each genus. Furthermore, we have specimen in the US pteridophyte her- future changes. been checking to ensure that all speci- barium will soon be captured. Eventually, Referring to the available literature, mens are stored in species folders and these images will be made accessible and beginning with the widely-accepted that species are organized alphabetically to all via the internet (http://collections. classification of Smith et al. (2006,Taxon within each region. mnh.si.edu/search/botany/). A future 55: 705-731), a new phylogenetically- issue of The Plant Press will highlight driven sequence was developed for hen imaging of the pterido- the imaging system (which should be pteridophyte families and genera. Execut- phyte herbarium begins later able to handle upwards of 6,000 speci- ing this system meant the combination of Wthis year, a record will be mens per day) and the process (which is some families and genera and the division created for every specimen in our EMu being overseen by Sylvia Orli). Here, I of others. As an example, four previously (Electronic Museum) collections man- outline the extensive preparations that recognized families were combined to agement system. Initially, each record have been—and continue to be—made in yield the current Pteridaceae, while the will only be populated with the image, anticipation of this considerable under- former Dennstaedtiaceae was divided the specimen barcode, and the name taking. into four families in the new system. currently applied to the specimen. The Thanks to more than a century of con- Although a few groups escaped unscathed, assignment of names will ultimately be tinuous curation by William Maxon, Con- in most cases reorganization has been a automated, but requires a considerable rad Morton, David Lellinger, and Greg species-by-species process. Often, the amount of up front preparation. Spencer McKee, the US pteridophyte herbarium requisite moves were not “local” and thus Goyette and Mike Tornabene have been was in excellent shape at the onset of this logistically challenging, with large taxa assembling a comprehensive list for the endeavor. All the same, there were many frequently needing to be relocated to new collection and Chris Tuccinardi has been aspects of both physical and intellectual (but already occupied) positions several importing names into the EMu system. curation to be carried out in preparation aisles away. Fortunately, we were able to From there, species folder barcodes (to for imaging. Perhaps most significant identify 33 herbarium cases adjacent to be read prior to the specimen barcodes as Continued on page 10 Travel Laurence Dorr traveled to Philadel- meeting of the Council on Library and Warren Wagner traveled to Kauai, phia, Pennsylvania (1/13) to participate Information Resources and to present Hawaii (3/20 – 4/4) to attend the board in a doctoral thesis defense at Drexel at the symposium, “Grinnell to GUIDs: meeting and science committee of the University and to use the herbarium of the Connecting Natural Science Archives and National Tropical Botanical Garden, and Academy of Natural Sciences. Specimens.” to conduct research on the Flora of the Ashley Egan traveled to Pocatello, Laurence Skog traveled to Sarasota, Marquesas Islands. Idaho (2/9 – 2/13) to visit the Ray J. Davis Florida (2/23 – 3/1) to work in the herbar- Mohammad Vatanparast traveled to Herbarium (IDS) at the Idaho Museum of ium at the Marie Selby Botanical Garden. Belo Horizonte, Brazil (2/16 – 3/1) to col- Natural History, Idaho State University. Alain Touwaide and Emanuela lect legumes from the savanna biome. W. John Kress traveled to New York Appetiti traveled to Athens, Greece Elizabeth Zimmer traveled to City, New York (1/15 – 1/17) to attend (12/15 – 1/15), where they participated in Chicago, Illinois (1/7 – 1/8) to attend an the American Psychoanalytic Conference the Dacalbo Project on Greek alchemy at editors meeting for the journal Molecular where he delivered a paper in a sympo- the National Hellenic Research Founda- Phylogenetics and Evolution. sium about the Anthropocene; to Panama tion and analyzed Greek botanico-medical City, Panama (1/21 – 1/24) to participate manuscripts at the National Library of in meetings about conservation science; Greece. Touwaide delivered three pub- to San Jose, Costa Rica (3/5 – 3/10) to lic lectures on the history of Greek and attend committee meetings of the Organi- Arabic science with a particular focus on zation for Tropical Studies; and to Panama botany: at the National Hellenic Research City, Panama (3/22 – 3/27) to take part Foundation (01/08), at the department of in research meetings and tour the facili- Arabic studies of the University of Athens ties at the Smithsonian Tropical Research (01/09), and at the Akadimia of Ancient Institute. Greek & Traditional Chinese Medicine Rusty Russell traveled to Philadelphia, (01/10). Pennsylvania (3/12 – 3/14) to attend a The Plant Press Visitors New Series - Vol. 18 - No. 2 Ning Zhang, Pennsylvania State Univer- Rafael de Almeida, Universidade Estad- Chair of Botany sity; Vitaceae (1/7/13-6/30/15). ual de Feira de Santana, Brazil; Malpighi- Warren L. Wagner aceae (1/13-2/13). ([email protected]) Yongli Fan, Xishuangbana Tropical Botanical Garden, China; Pollination stud- Dave Gammon, and 12 students, Elon EDITORIAL STAFF ies (1/13/14-1/12/15). University; Plant conservation and her- barium tour (1/15). Editor Eduardo Pasini, Universidade Federal Gary Krupnick do Rio Grande do Sul, Brazil; Compositae Genise Freire, Universidade Federal ([email protected]) (8/18/14-4/30/15). Rural do Rio de Janeiro, Brazil; Sapin- daceae (1/26-2/26). Copy Editors Carolina Diller, University of Maryland, Robin Everly, Bernadette Gibbons, and College Park; Angiosperm pollination Benjamin Carter, Duke Universtiy; Rose Gulledge (9/2/14-1/31/15). Bryophytes (1/27-1/28). News Contacts Craig Costion, University of Adelaide, Joe Miller, National Science Foundation; MaryAnn Apicelli, Rusty Russell, Alice Australia; DNA barcoding (11/3/14- Fabaceae (1/27-1/28). Tangerini, and Elizabeth Zimmer 10/31/15). The Plant Press is a quarterly publication pro- Yeni Rahayu, Bogor Agricultural Uni- vided free of charge. To receive notification of Yuejiao Shan, Wheaton, Maryland; Col- versity, Indonesia; Sumatran Tetrastigma when new pdf issues are posted to the web, please subscribe to the listserve by sending a message lection management internship (1/5-2/27). (Vitaceae) (2/2-4/17). to [email protected] containing only the following in the body of the text: SUBSCRIBE Carolina Moriani Siniscalchi, Universi- Liang Zhao, Northwest A&F University, PLANTPRESS-NEWS Firstname Lastname. dade de São Paulo, Brazil; Cresta (Com- China; Dichocarpum, Pulsatilla, Trollius Replace “Firstname Lastname” with your name. positae) (1/5-1/31) and its close relatives (Ranunculaceae) If you would like to be added to the hard-copy (2/5/15-2/26/16). mailing list, please contact Dr. Gary Krupnick at: Gabriel Emiliano Ferreira, National Department of Botany, Smithsonian Institution, PO Box 37012, NMNH MRC-166, Washington, Institute of Amazonian Research, Brazil; Monica Carlsen, Missouri Botanical Gar- DC 20013-7012, or by E-mail: krupnickg@ Gesneriaceae (1/7-2/17). den; Araceae and Zingiberales (2/17/15- si.edu. 2/16/17). Sandra Knapp, Natural History Museum, Web site: http://botany.si.edu/ United Kingdom; Solanaceae (1/9-1/10). Continued on page 5 Page 2 Completing the Marquesas Islands Flora he Department of Botany has a long history of the work of Stan Shetler and Sylvia Orli. Chair foundational biodiversity research. One major Smithsonian research in the South Pacific dates Tway the Department has contributed is through back to the U.S. Exploring Expedition, which formed long-term projects to produce floristic analyses for the beginnings of the herbarium in 1846. Some of the With local or regional areas that are intensively explored and most important work was completed by Al Smith on documented. These projects have led to an increase the Fiji Islands, and Ray Fosberg and Marie-Hélène in herbarium specimens, DNA samples, images, and Sachet on the Hawaiian Islands, French Polynesia community level data, including conservation assess- and Micronesia.
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    Towards a Phylogenetic Classification of Lychnophorinae (Asteraceae: Vernonieae)

    Benoît Francis Patrice Loeuille Towards a phylogenetic classification of Lychnophorinae (Asteraceae: Vernonieae) São Paulo, 2011 Benoît Francis Patrice Loeuille Towards a phylogenetic classification of Lychnophorinae (Asteraceae: Vernonieae) Tese apresentada ao Instituto de Biociências da Universidade de São Paulo, para a obtenção de Título de Doutor em Ciências, na Área de Botânica. Orientador: José Rubens Pirani São Paulo, 2011 Loeuille, Benoît Towards a phylogenetic classification of Lychnophorinae (Asteraceae: Vernonieae) Número de paginas: 432 Tese (Doutorado) - Instituto de Biociências da Universidade de São Paulo. Departamento de Botânica. 1. Compositae 2. Sistemática 3. Filogenia I. Universidade de São Paulo. Instituto de Biociências. Departamento de Botânica. Comissão Julgadora: Prof(a). Dr(a). Prof(a). Dr(a). Prof(a). Dr(a). Prof(a). Dr(a). Prof. Dr. José Rubens Pirani Orientador To my grandfather, who made me discover the joy of the vegetal world. Chacun sa chimère Sous un grand ciel gris, dans une grande plaine poudreuse, sans chemins, sans gazon, sans un chardon, sans une ortie, je rencontrai plusieurs hommes qui marchaient courbés. Chacun d’eux portait sur son dos une énorme Chimère, aussi lourde qu’un sac de farine ou de charbon, ou le fourniment d’un fantassin romain. Mais la monstrueuse bête n’était pas un poids inerte; au contraire, elle enveloppait et opprimait l’homme de ses muscles élastiques et puissants; elle s’agrafait avec ses deux vastes griffes à la poitrine de sa monture et sa tête fabuleuse surmontait le front de l’homme, comme un de ces casques horribles par lesquels les anciens guerriers espéraient ajouter à la terreur de l’ennemi.
  • Reconstructing the Deep-Branching Relationships of the Papilionoid Legumes

    Reconstructing the Deep-Branching Relationships of the Papilionoid Legumes

    SAJB-00941; No of Pages 18 South African Journal of Botany xxx (2013) xxx–xxx Contents lists available at SciVerse ScienceDirect South African Journal of Botany journal homepage: www.elsevier.com/locate/sajb Reconstructing the deep-branching relationships of the papilionoid legumes D. Cardoso a,⁎, R.T. Pennington b, L.P. de Queiroz a, J.S. Boatwright c, B.-E. Van Wyk d, M.F. Wojciechowski e, M. Lavin f a Herbário da Universidade Estadual de Feira de Santana (HUEFS), Av. Transnordestina, s/n, Novo Horizonte, 44036-900 Feira de Santana, Bahia, Brazil b Royal Botanic Garden Edinburgh, 20A Inverleith Row, EH5 3LR Edinburgh, UK c Department of Biodiversity and Conservation Biology, University of the Western Cape, Modderdam Road, \ Bellville, South Africa d Department of Botany and Plant Biotechnology, University of Johannesburg, P. O. Box 524, 2006 Auckland Park, Johannesburg, South Africa e School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA f Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA article info abstract Available online xxxx Resolving the phylogenetic relationships of the deep nodes of papilionoid legumes (Papilionoideae) is essential to understanding the evolutionary history and diversification of this economically and ecologically important legume Edited by J Van Staden subfamily. The early-branching papilionoids include mostly Neotropical trees traditionally circumscribed in the tribes Sophoreae and Swartzieae. They are more highly diverse in floral morphology than other groups of Keywords: Papilionoideae. For many years, phylogenetic analyses of the Papilionoideae could not clearly resolve the relation- Leguminosae ships of the early-branching lineages due to limited sampling.
  • Gene Dispersal in a Population of Carapa Guianensis

    Gene Dispersal in a Population of Carapa Guianensis

    Conservation genetics of exploited Amazonian forest tree species and the impact of selective logging on inbreeding and gene dispersal in a population of Carapa guianensis Dominic Cloutier Department of Biology McGill University Montréal, Québec, Canada A thesis submitted to McGill University in partial fulfillment of the requirements of the degree of Doctor of Philosophy © Dominic Cloutier, November 2006 Library and Bibliothèque et 1+1 Archives Canada Archives Canada Published Heritage Direction du Branch Patrimoine de l'édition 395 Wellington Street 395, rue Wellington Ottawa ON K1A ON4 Ottawa ON K1A ON4 Canada Canada Your file Votre référence ISBN: 978-0-494-32166-9 Our file Notre référence ISBN: 978-0-494-32166-9 NOTICE: AVIS: The author has granted a non­ L'auteur a accordé une licence non exclusive exclusive license allowing Library permettant à la Bibliothèque et Archives and Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par télécommunication ou par l'Internet, prêter, telecommunication or on the Internet, distribuer et vendre des thèses partout dans loan, distribute and sell th es es le monde, à des fins commerciales ou autres, worldwide, for commercial or non­ sur support microforme, papier, électronique commercial purposes, in microform, et/ou autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriété du droit d'auteur ownership and moral rights in et des droits moraux qui protège cette thèse. this thesis. Neither the thesis Ni la thèse ni des extraits substantiels de nor substantial extracts from it celle-ci ne doivent être imprimés ou autrement may be printed or otherwise reproduits sans son autorisation.