A Comparison of Object-Triple Mapping Frameworks
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The Semantic Web in Action
INFORMATION TECHNOLOGY KEY CONCEPTS Corporate applications are well under way, ■ A wide variety of online Semantic Web applications are and consumer uses are emerging emerging, from Vodafone Live!’s mobile phone service to Boeing’s system for coordinating the work of vendors. ix years ago in this magazine, Tim Ber- that would make this vision come true: a com- ners-Lee, James Hendler and Ora Las- mon language for representing data that could ■ Scientific researchers are devel- sila unveiled a nascent vision of the be understood by all kinds of software agents; oping some of the most advanced S Semantic Web: a highly interconnected network ontologies—sets of statements—that translate applications, including a system that pinpoints genetic causes of of data that could be easily accessed and under- information from disparate databases into heart disease and another system stood by any desktop or handheld machine. common terms; and rules that allow software that reveals the early stages of in- They painted a future of intelligent software agents to reason about the information de- fluenza outbreaks. agents that would head out on the World Wide scribed in those terms. The data format, ontol- Web and automatically book flights and hotels ogies and reasoning software would operate ■ Companies and universities, working through the World Wide for our trips, update our medical records and like one big application on the World Wide Web Consortium, are developing give us a single, customized answer to a partic- Web, analyzing all the raw data stored in online standards that are making the Se- ular question without our having to search for databases as well as all the data about the text, mantic Web more accessible and information or pore through results. -
Mapping Spatiotemporal Data to RDF: a SPARQL Endpoint for Brussels
International Journal of Geo-Information Article Mapping Spatiotemporal Data to RDF: A SPARQL Endpoint for Brussels Alejandro Vaisman 1, * and Kevin Chentout 2 1 Instituto Tecnológico de Buenos Aires, Buenos Aires 1424, Argentina 2 Sopra Banking Software, Avenue de Tevuren 226, B-1150 Brussels, Belgium * Correspondence: [email protected]; Tel.: +54-11-3457-4864 Received: 20 June 2019; Accepted: 7 August 2019; Published: 10 August 2019 Abstract: This paper describes how a platform for publishing and querying linked open data for the Brussels Capital region in Belgium is built. Data are provided as relational tables or XML documents and are mapped into the RDF data model using R2RML, a standard language that allows defining customized mappings from relational databases to RDF datasets. In this work, data are spatiotemporal in nature; therefore, R2RML must be adapted to allow producing spatiotemporal Linked Open Data.Data generated in this way are used to populate a SPARQL endpoint, where queries are submitted and the result can be displayed on a map. This endpoint is implemented using Strabon, a spatiotemporal RDF triple store built by extending the RDF store Sesame. The first part of the paper describes how R2RML is adapted to allow producing spatial RDF data and to support XML data sources. These techniques are then used to map data about cultural events and public transport in Brussels into RDF. Spatial data are stored in the form of stRDF triples, the format required by Strabon. In addition, the endpoint is enriched with external data obtained from the Linked Open Data Cloud, from sites like DBpedia, Geonames, and LinkedGeoData, to provide context for analysis. -
Open Web Ontobud: an Open Source RDF4J Frontend
Open Web Ontobud: An Open Source RDF4J Frontend Francisco José Moreira Oliveira University of Minho, Braga, Portugal [email protected] José Carlos Ramalho Department of Informatics, University of Minho, Braga, Portugal [email protected] Abstract Nowadays, we deal with increasing volumes of data. A few years ago, data was isolated, which did not allow communication or sharing between datasets. We live in a world where everything is connected, and our data mimics this. Data model focus changed from a square structure like the relational model to a model centered on the relations. Knowledge graphs are the new paradigm to represent and manage this new kind of information structure. Along with this new paradigm, a new kind of database emerged to support the new needs, graph databases! Although there is an increasing interest in this field, only a few native solutions are available. Most of these are commercial, and the ones that are open source have poor interfaces, and for that, they are a little distant from end-users. In this article, we introduce Ontobud, and discuss its design and development. A Web application that intends to improve the interface for one of the most interesting frameworks in this area: RDF4J. RDF4J is a Java framework to deal with RDF triples storage and management. Open Web Ontobud is an open source RDF4J web frontend, created to reduce the gap between end users and the RDF4J backend. We have created a web interface that enables users with a basic knowledge of OWL and SPARQL to explore ontologies and extract information from them. -
A Performance Study of RDF Stores for Linked Sensor Data
Semantic Web 1 (0) 1–5 1 IOS Press 1 1 2 2 3 3 4 A Performance Study of RDF Stores for 4 5 5 6 Linked Sensor Data 6 7 7 8 Hoan Nguyen Mau Quoc a,*, Martin Serrano b, Han Nguyen Mau c, John G. Breslin d , Danh Le Phuoc e 8 9 a Insight Centre for Data Analytics, National University of Ireland Galway, Ireland 9 10 E-mail: [email protected] 10 11 b Insight Centre for Data Analytics, National University of Ireland Galway, Ireland 11 12 E-mail: [email protected] 12 13 c Information Technology Department, Hue University, Viet Nam 13 14 E-mail: [email protected] 14 15 d Confirm Centre for Smart Manufacturing and Insight Centre for Data Analytics, National University of Ireland 15 16 Galway, Ireland 16 17 E-mail: [email protected] 17 18 e Open Distributed Systems, Technical University of Berlin, Germany 18 19 E-mail: [email protected] 19 20 20 21 21 Editors: First Editor, University or Company name, Country; Second Editor, University or Company name, Country 22 Solicited reviews: First Solicited Reviewer, University or Company name, Country; Second Solicited Reviewer, University or Company name, 22 23 Country 23 24 Open reviews: First Open Reviewer, University or Company name, Country; Second Open Reviewer, University or Company name, Country 24 25 25 26 26 27 27 28 28 29 Abstract. The ever-increasing amount of Internet of Things (IoT) data emanating from sensor and mobile devices is creating 29 30 new capabilities and unprecedented economic opportunity for individuals, organisations and states. -
Storage, Indexing, Query Processing, And
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 23 May 2020 doi:10.20944/preprints202005.0360.v1 STORAGE,INDEXING,QUERY PROCESSING, AND BENCHMARKING IN CENTRALIZED AND DISTRIBUTED RDF ENGINES:ASURVEY Waqas Ali Department of Computer Science and Engineering, School of Electronic, Information and Electrical Engineering (SEIEE), Shanghai Jiao Tong University, Shanghai, China [email protected] Muhammad Saleem Agile Knowledge and Semantic Web (AKWS), University of Leipzig, Leipzig, Germany [email protected] Bin Yao Department of Computer Science and Engineering, School of Electronic, Information and Electrical Engineering (SEIEE), Shanghai Jiao Tong University, Shanghai, China [email protected] Axel-Cyrille Ngonga Ngomo University of Paderborn, Paderborn, Germany [email protected] ABSTRACT The recent advancements of the Semantic Web and Linked Data have changed the working of the traditional web. There is a huge adoption of the Resource Description Framework (RDF) format for saving of web-based data. This massive adoption has paved the way for the development of various centralized and distributed RDF processing engines. These engines employ different mechanisms to implement key components of the query processing engines such as data storage, indexing, language support, and query execution. All these components govern how queries are executed and can have a substantial effect on the query runtime. For example, the storage of RDF data in various ways significantly affects the data storage space required and the query runtime performance. The type of indexing approach used in RDF engines is key for fast data lookup. The type of the underlying querying language (e.g., SPARQL or SQL) used for query execution is a key optimization component of the RDF storage solutions. -
Performance of RDF Library of Java, C# and Python on Large RDF Models
et International Journal on Emerging Technologies 12(1): 25-30(2021) ISSN No. (Print): 0975-8364 ISSN No. (Online): 2249-3255 Performance of RDF Library of Java, C# and Python on Large RDF Models Mustafa Ali Bamboat 1, Abdul Hafeez Khan 2 and Asif Wagan 3 1Department of Computer Science, Sindh Madressatul Islam University (SMIU), Karachi, (Sindh), Pakistan. 2Department of Software Engineering, Sindh Madressatul Islam University (SMIU) Karachi, (Sindh), Pakistan. 3Department of Computer Science, Sindh Madressatul Islam University (SMIU), Karachi (Sindh), Pakistan. (Corresponding author: Mustafa Ali Bamboat) (Received 03 November 2020, Revised 22 December 2020, Accepted 28 January 2021) (Published by Research Trend, Website: www.researchtrend.net) ABSTRACT: The semantic web is an extension of the traditional web, in which contents are understandable to the machine and human. RDF is a Semantic Web technology used to create data stores, build vocabularies, and write rules for approachable LinkedData. RDF Framework expresses the Web Data using Uniform Resource Identifiers, which elaborate the resource in triples consisting of subject, predicate, and object. This study examines RDF libraries' performance on three platforms like Java, DotNet, and Python. We analyzed the performance of Apache Jena, DotNetRDF, and RDFlib libraries on the RDF model of LinkedMovie and Medical Subject Headings (MeSH) in aspects measuring matrices such as loading time, file traversal time, query response time, and memory utilization of each dataset. SPARQL is the RDF model's query language; we used six queries, three for each dataset, to analyze each query's response time on the selected RDF libraries. Keywords: dotNetRDF, Apache Jena, RDFlib, LinkedMovie, MeSH. -
Ontology and Information Systems
Ontology and Information Systems 1 Barry Smith Philosophical Ontology Ontology as a branch of philosophy is the science of what is, of the kinds and structures of objects, properties, events, processes and relations in every area of reality. ‘Ontology’ is often used by philosophers as a synonym for ‘metaphysics’ (literally: ‘what comes after the Physics’), a term which was used by early students of Aristotle to refer to what Aristotle himself called ‘first philosophy’.2 The term ‘ontology’ (or ontologia) was itself coined in 1613, independently, by two philosophers, Rudolf Göckel (Goclenius), in his Lexicon philosophicum and Jacob Lorhard (Lorhardus), in his Theatrum philosophicum. The first occurrence in English recorded by the OED appears in Bailey’s dictionary of 1721, which defines ontology as ‘an Account of being in the Abstract’. Methods and Goals of Philosophical Ontology The methods of philosophical ontology are the methods of philosophy in general. They include the development of theories of wider or narrower scope and the testing and refinement of such theories by measuring them up, either against difficult 1 This paper is based upon work supported by the National Science Foundation under Grant No. BCS-9975557 (“Ontology and Geographic Categories”) and by the Alexander von Humboldt Foundation under the auspices of its Wolfgang Paul Program. Thanks go to Thomas Bittner, Olivier Bodenreider, Anita Burgun, Charles Dement, Andrew Frank, Angelika Franzke, Wolfgang Grassl, Pierre Grenon, Nicola Guarino, Patrick Hayes, Kathleen Hornsby, Ingvar Johansson, Fritz Lehmann, Chris Menzel, Kevin Mulligan, Chris Partridge, David W. Smith, William Rapaport, Daniel von Wachter, Chris Welty and Graham White for helpful comments. -
The World of Knowledge Graphs in Oracle Databases
The World of Knowledge Graphs in Oracle Databases Collaboration between Semantic Web Company and Oracle Emma Thomas Sebastian Gabler Principal Solutions Architect Director of Sales Oracle A-team Semantic Web Company November 19th 2019 2 Confidential – © 2019 Oracle Restricted Safe Harbor Statement The following is intended to outline our general product direction. It is intended for information purposes only, and may not be incorporated into any contract. It is not a commitment to deliver any material, code, or functionality, and should not be relied upon in making purchasing decisions. The development, release, timing, and pricing of any features or functionality described for Oracle’s products may change and remains at the sole discretion of Oracle Corporation. 3 The World of Knowledge Graphs in Oracle Databases Introduction to Knowledge Graphs Oracle Database Spatial and Graph - RDF Focus Oracle RDF4J adapter Using PoolParty for Search, Similarity, Recommendation and Visualisation 4 Confidential – © 2019 Oracle Restricted Graphs are Everywhere Heiko Paulheim. Journal of Web Semantics: Special Issue on Knowledge Graph Refinement. “Knowledge Graph Refinement: A Survey of Approaches and Evaluation Methods.” [September, 2016] 5 Confidential – © 2019 Oracle Restricted An Opte Project Visualisation of routing paths through a portion of the Internet By The Opte Project - Originally from the English Wikipedia; description page is/was here., CC BY 2.5, https://commons.wikimedia.org/w/index.php?cu rid=1538544 6 What is a Knowledge Graph? Knowledge graphs are large networks of entities, their semantic types, properties, and relationships between entities1. Key Features: Knowledge “Things, not strings” Database Base Knowledge global unique identifiers Graph Formal structure/semantics machine processable, unambiguous Linked descriptions Graph resources are described by their connections 1. -
Graphdb-Free.Pdf
GraphDB Free Documentation Release 8.5 Ontotext Jun 17, 2019 CONTENTS 1 General 1 1.1 About GraphDB...........................................2 1.2 Architecture & components.....................................2 1.2.1 Architecture.........................................2 1.2.1.1 RDF4J.......................................3 1.2.1.2 The Sail API....................................4 1.2.2 Components.........................................4 1.2.2.1 Engine.......................................4 1.2.2.2 Connectors.....................................5 1.2.2.3 Workbench.....................................5 1.3 GraphDB Free............................................5 1.3.1 Comparison of GraphDB Free and GraphDB SE......................6 1.4 Connectors..............................................6 1.5 Workbench..............................................6 2 Quick start guide 9 2.1 Run GraphDB as a desktop installation...............................9 2.1.1 On Windows........................................ 10 2.1.2 On Mac OS......................................... 10 2.1.3 On Linux.......................................... 10 2.1.4 Configuring GraphDB................................... 10 2.1.5 Stopping GraphDB..................................... 11 2.2 Run GraphDB as a stand-alone server................................ 11 2.2.1 Running GraphDB..................................... 11 2.2.1.1 Options...................................... 11 2.2.2 Configuring GraphDB................................... 12 2.2.2.1 Paths and network settings........................... -
Sapphire: Generating Java Runtime Artefacts from OWL Ontologies
Sapphire: Generating Java Runtime Artefacts from OWL Ontologies Graeme Stevenson and Simon Dobson School of Computer Science, University of St Andrews, UK [email protected] Abstract. The OWL ontology language is proving increasingly popular as a means of crafting formal, semantically-rich, models of information systems. One application of such models is the direct translation of a conceptual model to a set of executable artefacts. Current tool support for such translations lacks matu- rity and exhibits several limitations including a lack of support for reification, the open-world assumption, and dynamic classification of individuals as supported by OWL semantics. Building upon the state-of-the-art we present a mapping from OWL to Java that addresses these limitations, and its realisation in the form of a tool, Sapphire. We describe Sapphire’s design and present a preliminary evalua- tion that illustrates how Sapphire supports the developer in writing concise, type safe code compared to standard approaches while maintaining competitive run- time performance with standard APIs. Keywords: Information systems, OWL, Java, Ontology, Bytecode generation, Data binding. 1 Introduction A goal of ontology-driven information systems engineering is the construction of real- world domain models with su Æcient formality, expressiveness, and semantic-richness to allow information system software components to be automatically generated from the underlying ontological description [1]. Several commentators advocate mapping from ontologies to strongly-typed program- ming languages in order to eliminate a large class of typographic errors at compile time that might only be discovered at runtime or go undetected if a dynamic approach were taken [2,3]. -
A Vision for Diagrammatic Ontology Engineering
A Vision for Diagrammatic Ontology Engineering Gem Stapleton1, John Howse1, Adrienne Bonnington2, and Jim Burton1 1 University of Brighton, UK, g.e.stapleton,john.howse,j.burton @brighton.ac.uk, { } 2 Horizons Regional Council, NZ, [email protected] Abstract. Ontology engineering is becoming more important, given the rapid rise of data in this information age. To better understand and rea- son about this data, ontologies provide us with insight into its structure. With this comes the involvement of a wide range of stakeholders, such as information analysts, software engineers, lawyers, and domain experts, alongside specialist ontology engineers. These specialists are likely to be adept at using existing approaches to ontology development, typically description logic or one of its various stylized forms. However, not all stakeholders can readily access such notations, which often have a very mathematical style. Many stakeholders, even including fluent ontology engineers, could benefit from visual approaches to ontology engineering, provided those approaches are accessible. This paper presents ongoing re- search into a diagrammatic approach to ontology engineering, outlining key research advances that are required. Keywords: ontology engineering, diagrams, visualization 1 Introduction Ontologies are used as structural frameworks for organizing information and are a form of knowledge representation. Ontology engineering - the process of producing ontologies - is becoming increasingly important and ubiquitous in society as -
Emergent Relational Schemas for RDF
Emergent Relational Schemas for RDF Minh Duc Pham Committee prof.dr. Frank van Harmelen prof.dr. Martin Kersten prof.dr. Josep Lluis Larriba Pey prof.dr. Thomas Neumann dr. Jacopo Urbani The research reported in this thesis has been partially carried out at CWI, the Dutch National Research Laboratory for Mathematics and Computer Science, within the theme Database Architectures. The research reported in this thesis has been partially carried out as part of the continuous research and development of the MonetDB open-source database man- agement system. SIKS Dissertation Series No. 2018-19 The research reported in this thesis has been carried out under the auspices of SIKS, the Dutch Research School for Information and Knowledge Systems. The cover was designed by the author. Photo by Leo Rivas on Unsplash. The printing and binding of this dissertation was carried out by Ipskamp Printing. ISBN 978-94-028-1110-0 VRIJE UNIVERSITEIT Emergent Relational Schemas for RDF ACADEMISCH PROEFSCHRIFT ter verkrijging van de graad Doctor aan de Vrije Universiteit Amsterdam, op gezag van de rector magnificus prof.dr. V. Subramaniam, in het openbaar te verdedigen ten overstaan van de promotiecommissie van de Faculteit der Bètawetenschappen op donderdag 6 september 2018 om 15.45 uur in de aula van de universiteit, De Boelelaan 1105 door Minh Duc Pham geboren te Bac Ninh, Vietnam promotor: prof.dr. P.A. Boncz copromotor: prof.dr. S. Manegold Tặng bố mẹ của con vì tình yêu thương vô bờ bến, Tặng em yêu vì bao gian khổ, ngọt ngào và con trai - nguồn vui vô tận ..