The Taxonomy of the Chlorophyta. II F.E
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Universidad Autónoma De Nuevo León Facultad De Ciencias Biológicas
UNIVERSIDAD AUTÓNOMA DE NUEVO LEÓN FACULTAD DE CIENCIAS BIOLÓGICAS TESIS TAXONOMÍA, DISTRIBUCIÓN E IMPORTANCIA DE LAS ALGAS DE NUEVO LEÓN POR DIANA ELENA AGUIRRE CAVAZOS COMO REQUISITO PARCIAL PARA OBTENER EL GRADO DE DOCTOR EN CIENCIAS CON ACENTUACIÓN EN MANEJO Y ADMINISTRACIÓN DE RECURSOS VEGETALES MAYO, 2018 TAXONOMÍA, DISTRIBUCIÓN E IMPORTANCIA DE LAS ALGAS DE NUEVO LEÓN Comité de Tesis Presidente: Dr. Sergio Manuel Salcedo Martínez. Secretario: Dr. Sergio Moreno Limón. Vocal 1: Hugo Alberto Luna Olvera. Vocal 2: Dr. Marco Antonio Alvarado Vázquez. Vocal 3: Dra. Alejandra Rocha Estrada. TAXONOMÍA, DISTRIBUCIÓN E IMPORTANCIA DE LAS ALGAS DE NUEVO LEÓN Dirección de Tesis Director: Dr. Sergio Manuel Salcedo Martínez. AGRADECIMIENTOS A Dios, por guiar siempre mis pasos y darme fortaleza ante las dificultades. Al Dr. Sergio Manuel Salcedo Martínez, por su disposición para participar como director de este proyecto, por sus consejos y enseñanzas que siempre tendré presente tanto en mi vida profesional como personal; pero sobre todo por su dedicación, paciencia y comprensión que hicieron posible la realización de este trabajo. A la Dra. Alejandra Rocha Estrada, El Dr. Marco Antonio Alvarado Vázquez, el Dr. Sergio Moreno Limón y el Dr. Hugo Alberto Luna Olvera por su apoyo y aportaciones para la realización de este trabajo. Al Dr. Eberto Novelo, por sus valiosas aportaciones para enriquecer el listado taxonómico. A la M.C. Cecilia Galicia Campos, gracias Cecy, por hacer tan amena la estancia en el laboratorio y en el Herbario; por esas pláticas interminables y esas “riso terapias” que siempre levantaban el ánimo. A mis entrañables amigos, “los biólogos”, “los cacos”: Brenda, Libe, Lula, Samy, David, Gera, Pancho, Reynaldo y Ricardo. -
Akashiwo Sanguinea
Ocean ORIGINAL ARTICLE and Coastal http://doi.org/10.1590/2675-2824069.20-004hmdja Research ISSN 2675-2824 Phytoplankton community in a tropical estuarine gradient after an exceptional harmful bloom of Akashiwo sanguinea (Dinophyceae) in the Todos os Santos Bay Helen Michelle de Jesus Affe1,2,* , Lorena Pedreira Conceição3,4 , Diogo Souza Bezerra Rocha5 , Luis Antônio de Oliveira Proença6 , José Marcos de Castro Nunes3,4 1 Universidade do Estado do Rio de Janeiro - Faculdade de Oceanografia (Bloco E - 900, Pavilhão João Lyra Filho, 4º andar, sala 4018, R. São Francisco Xavier, 524 - Maracanã - 20550-000 - Rio de Janeiro - RJ - Brazil) 2 Instituto Nacional de Pesquisas Espaciais/INPE - Rede Clima - Sub-rede Oceanos (Av. dos Astronautas, 1758. Jd. da Granja -12227-010 - São José dos Campos - SP - Brazil) 3 Universidade Estadual de Feira de Santana - Departamento de Ciências Biológicas - Programa de Pós-graduação em Botânica (Av. Transnordestina s/n - Novo Horizonte - 44036-900 - Feira de Santana - BA - Brazil) 4 Universidade Federal da Bahia - Instituto de Biologia - Laboratório de Algas Marinhas (Rua Barão de Jeremoabo, 668 - Campus de Ondina 40170-115 - Salvador - BA - Brazil) 5 Instituto Internacional para Sustentabilidade - (Estr. Dona Castorina, 124 - Jardim Botânico - 22460-320 - Rio de Janeiro - RJ - Brazil) 6 Instituto Federal de Santa Catarina (Av. Ver. Abrahão João Francisco, 3899 - Ressacada, Itajaí - 88307-303 - SC - Brazil) * Corresponding author: [email protected] ABSTRAct The objective of this study was to evaluate variations in the composition and abundance of the phytoplankton community after an exceptional harmful bloom of Akashiwo sanguinea that occurred in Todos os Santos Bay (BTS) in early March, 2007. -
Seed Plant Models
Review Tansley insight Why we need more non-seed plant models Author for correspondence: Stefan A. Rensing1,2 Stefan A. Rensing 1 2 Tel: +49 6421 28 21940 Faculty of Biology, University of Marburg, Karl-von-Frisch-Str. 8, 35043 Marburg, Germany; BIOSS Biological Signalling Studies, Email: stefan.rensing@biologie. University of Freiburg, Sch€anzlestraße 18, 79104 Freiburg, Germany uni-marburg.de Received: 30 October 2016 Accepted: 18 December 2016 Contents Summary 1 V. What do we need? 4 I. Introduction 1 VI. Conclusions 5 II. Evo-devo: inference of how plants evolved 2 Acknowledgements 5 III. We need more diversity 2 References 5 IV. Genomes are necessary, but not sufficient 3 Summary New Phytologist (2017) Out of a hundred sequenced and published land plant genomes, four are not of flowering plants. doi: 10.1111/nph.14464 This severely skewed taxonomic sampling hinders our comprehension of land plant evolution at large. Moreover, most genetically accessible model species are flowering plants as well. If we are Key words: Charophyta, evolution, fern, to gain a deeper understanding of how plants evolved and still evolve, and which of their hornwort, liverwort, moss, Streptophyta. developmental patterns are ancestral or derived, we need to study a more diverse set of plants. Here, I thus argue that we need to sequence genomes of so far neglected lineages, and that we need to develop more non-seed plant model species. revealed much, the exact branching order and evolution of the I. Introduction nonbilaterian lineages is still disputed (Lanna, 2015). Research on animals has for a long time relied on a number of The first (small) plant genome to be sequenced was of THE traditional model organisms, such as mouse, fruit fly, zebrafish or model plant, the weed Arabidopsis thaliana (c. -
The Identification of Functional, Sequestered, Symbiotic Chloroplasts
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 2006 The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes Nicholas E. Curtis University of South Florida Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the American Studies Commons Scholar Commons Citation Curtis, Nicholas E., "The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes" (2006). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/2496 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. The Identification of Functional, Sequestered, Symbiotic Chloroplasts in Elysia clarki: A Crucial Step in the Study of Horizontally Transferred, Nuclear Algal Genes by Nicholas E. Curtis A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Biology College of Arts and Sciences University of South Florida Major Professor: Sidney K. Pierce, Jr., Ph.D. Clinton J. Dawes, Ph.D. Kathleen M. Scott, Ph.D. Brian T. Livingston, Ph.D. Date of Approval: June 15, 2006 Keywords: Bryopsidales, kleptoplasty, sacoglossan, rbcL, chloroplast symbiosis Penicillus, Halimeda, Bryopsis, Derbesia © Copyright 2006, Nicholas E. Curtis Note to Reader The original of this document contains color that is necessary for understanding the data. The original dissertation is on file with the USF library in Tampa, Florida. -
Les Algues Du Fleuve Niger Et Des Milieux Humides Connexes De L’Ouest Du Niger
RÉPUBLIQUE DU NIGER N°………….. Fraternité-Travail-Progrès UNIVERSITÉ ABDOU MOUMOUNI Faculté des Sciences et Techniques Département de Biologie THÈSE UNIQUE DE DOCTORAT DE L’UNIVERSITÉ ABDOU MOUMOUNI Présentée par Monsieur Djima Idrissou Tahirou Pour obtenir le grade de DOCTEUR DE L’UNIVERSITÉ ABDOU MOUMOUNI DOMAINE Taxonomie, Morphologie et Biologie Végétales SPÉCIALITÉ Phycologie SUJET DE LA THÈSE LES ALGUES DU FLEUVE NIGER ET DES MILIEUX HUMIDES CONNEXES DE L’OUEST DU NIGER Thèse présentée et soutenue à Niamey le 28 Février 2013 devant le jury composé de : Monsieur AKÉ Assi Laurent, Professeur, Université Félix Houphouët-Boigny, Abidjan, Président Monsieur SAADOU Mahamane, Professeur, Université Abdou Moumouni, Niamey, Directeur de thèse Monsieur COUTÉ Alain, Professeur, Muséum National d’Histoire Naturelle, Paris, Rapporteur Monsieur DA Kouhété Philippe, Maître de Conférences, Université Félix Houphouët-Boigny, Abidjan, Rapporteur Monsieur MAHAMANE Ali, Professeur, Université Abdou Moumouni, Niamey, Examinateur Laboratoire de Biologie Végétale GARBA Mounkaïla Faculté des Sciences/Université ABDOU Moumouni/ Niamey/NIGER BP 10 662 Niamey-Niger Tél : +227 96 53 16 33 / +227 94 85 56 38 Table des matières Liste de figures ................................................................................................................... viii Liste des tableaux ...................................................................................................................x Principales Abréviations ...................................................................................................... -
Evolution of Land Plants P
Chapter 4. The evolutionary classification of land plants The evolutionary classification of land plants Land plants evolved from a group of green algae, possibly as early as 500–600 million years ago. Their closest living relatives in the algal realm are a group of freshwater algae known as stoneworts or Charophyta. According to the fossil record, the charophytes' growth form has changed little since the divergence of lineages, so we know that early land plants evolved from a branched, filamentous alga dwelling in shallow fresh water, perhaps at the edge of seasonally-desiccating pools. The biggest challenge that early land plants had to face ca. 500 million years ago was surviving in dry, non-submerged environments. Algae extract nutrients and light from the water that surrounds them. Those few algae that anchor themselves to the bottom of the waterbody do so to prevent being carried away by currents, but do not extract resources from the underlying substrate. Nutrients such as nitrogen and phosphorus, together with CO2 and sunlight, are all taken by the algae from the surrounding waters. Land plants, in contrast, must extract nutrients from the ground and capture CO2 and sunlight from the atmosphere. The first terrestrial plants were very similar to modern mosses and liverworts, in a group called Bryophytes (from Greek bryos=moss, and phyton=plants; hence “moss-like plants”). They possessed little root-like hairs called rhizoids, which collected nutrients from the ground. Like their algal ancestors, they could not withstand prolonged desiccation and restricted their life cycle to shaded, damp habitats, or, in some cases, evolved the ability to completely dry-out, putting their metabolism on hold and reviving when more water arrived, as in the modern “resurrection plants” (Selaginella). -
Proposal for Practical Multi-Kingdom Classification of Eukaryotes Based on Monophyly 2 and Comparable Divergence Time Criteria
bioRxiv preprint doi: https://doi.org/10.1101/240929; this version posted December 29, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Proposal for practical multi-kingdom classification of eukaryotes based on monophyly 2 and comparable divergence time criteria 3 Leho Tedersoo 4 Natural History Museum, University of Tartu, 14a Ravila, 50411 Tartu, Estonia 5 Contact: email: [email protected], tel: +372 56654986, twitter: @tedersoo 6 7 Key words: Taxonomy, Eukaryotes, subdomain, phylum, phylogenetic classification, 8 monophyletic groups, divergence time 9 Summary 10 Much of the ecological, taxonomic and biodiversity research relies on understanding of 11 phylogenetic relationships among organisms. There are multiple available classification 12 systems that all suffer from differences in naming, incompleteness, presence of multiple non- 13 monophyletic entities and poor correspondence of divergence times. These issues render 14 taxonomic comparisons across the main groups of eukaryotes and all life in general difficult 15 at best. By using the monophyly criterion, roughly comparable time of divergence and 16 information from multiple phylogenetic reconstructions, I propose an alternative 17 classification system for the domain Eukarya to improve hierarchical taxonomical 18 comparability for animals, plants, fungi and multiple protist groups. Following this rationale, 19 I propose 32 kingdoms of eukaryotes that are treated in 10 subdomains. These kingdoms are 20 further separated into 43, 115, 140 and 353 taxa at the level of subkingdom, phylum, 21 subphylum and class, respectively (http://dx.doi.org/10.15156/BIO/587483). -
First Identification of the Chlorophyte Algae Pseudokirchneriella Subcapitata (Korshikov) Hindák in Lake Waters of India
Nature Environment and Pollution Technology p-ISSN: 0972-6268 Vol. 19 No. 1 pp. 409-412 2020 An International Quarterly Scientific Journal e-ISSN: 2395-3454 Original Research Paper Open Access First Identification of the Chlorophyte Algae Pseudokirchneriella subcapitata (Korshikov) Hindák in Lake Waters of India Vidya Padmakumar and N. C. Tharavathy Department of Studies and Research in Biosciences, Mangalore University, Mangalagangotri, Mangaluru-574199, Dakshina Kannada, Karnataka, India ABSTRACT Nat. Env. & Poll. Tech. Website: www.neptjournal.com The species Pseudokirchneriella subcapitata is a freshwater microalga belonging to Chlorophyceae. It is one of the best-known bio indicators in eco-toxicological research. It has been increasingly Received: 13-06-2019 prevalent in many fresh water bodies worldwide. They have been since times used in many landmark Accepted: 23-07-2019 toxicological analyses due to their ubiquitous nature and acute sensitivity to substances. During a survey Key Words: of chlorophytes in effluent impacted lakes of Attibele region of Southern Bangalore,Pseudokirchneriella Bioindicator subcapitata was identified from the samples collected from the Giddenahalli Lake as well as Zuzuvadi Ecotoxicology Lake. This is the first identification of this species in India. Analysis based on micromorphology confirmed Lakes of India the status of the organism to be Pseudokirchneriella subcapitata. Pseudokirchneriella subcapitata INTRODUCTION Classification: Pseudokirchneriella subcapitata was previously called as Empire: Eukaryota Selenastrum capricornatum (NIVA-CHL 1 strain). But Kingdom: Plantae according to Nygaard & Komarek et al. (1986, 1987), Subkingdom: Viridiplantae this alga does not belong to the genus Selenastrum instead to Raphidocelis (Hindak 1977) and was renamed Infrakingdom: Chlorophyta Raphidocelis subcapitata (Korshikov 1953). Hindak Phylum: Chlorophyta in 1988 made the name Kirchneriella subcapitata Subphylum: Chlorophytina Korshikov, and it was his type species of his new Genus Class: Chlorophyceae Kirchneria. -
Molecular Phylogeny and Taxonomic Revision of Chaetophoralean Algae (Chlorophyta)
University of South Bohemia in České Budějovice Faculty of Science Molecular phylogeny and taxonomic revision of chaetophoralean algae (Chlorophyta) Ph.D. Thesis Mgr. Lenka Caisová Supervisor RNDr. Jiří Neustupa, Ph.D. Department of Botany, Faculty of Sciences, Charles University in Prague Formal supervisor Prof. RNDr. Jiří Komárek, DrSc. University of South Bohemia, Faculty of Science, Institute of Botany, Academy of Sciences, Třeboň Consultants Prof. Dr. Michael Melkonian Biozentrum Köln, Botanisches Institut, Universität zu Köln, Germany Mgr. Pavel Škaloud, Ph.D. Department of Botany, Faculty of Sciences, Charles University in Prague České Budějovice, 2011 Caisová, L. 2011: Molecular phylogeny and taxonomic revision of chaetophoralean algae (Chlorophyta). PhD. Thesis, composite in English. University of South Bohemia, Faculty of Science, České Budějovice, Czech Republic, 110 pp, shortened version 30 pp. Annotation Since the human inclination to estimate and trace natural diversity, usable species definitions as well as taxonomical systems are required. As a consequence, the first proposed classification schemes assigned the filamentous and parenchymatous taxa to the green algal order Chaetophorales sensu Wille. The introduction of ultrastructural and molecular methods provided novel insight into algal evolution and generated taxonomic revisions based on phylogenetic inference. However, until now, the number of molecular phylogenetic studies focusing on the Chaetophorales s.s. is surprisingly low. To enhance knowledge about phylogenetic -
2010 South Fork Holston River Environmental Monitoring Studies
2010 South Fork Holston River Environmental Monitoring Studies Patrick Center for Environmental Research 2010 South Fork Holston River Environmental Monitoring Studies Report No. 10-04F Submitted to: Eastman Chemical Company Tennessee Operations Submitted by: Patrick Center for Environmental Research 1900 Benjamin Franklin Parkway Philadelphia, PA 19103-1195 April 20, 2012 Executive Summary he 2010 study was the seventh in a series of comprehensive studies of aquatic biota and Twater chemistry conducted by the Academy of Natural Sciences of Drexel University in the vicinity of Kingsport, TN. Previous studies were conducted in 1965, 1967 (cursory study, primarily focusing on al- gae), 1974, 1977, 1980, 1990 and 1997. Elements of the 2010 study included analysis of land cover, basic environmental water chemistry, attached algae and aquatic macrophytes, aquatic insects, non-insect macroinvertebrates, and fish. For each study element, field samples were collected and analyzed from Scientists from the Academy's Patrick Center for Environmental Research zones located on the South Fork Holston River have conducted seven major environmental monitoring studies on the (Zones 2, 3 and 5), Big Sluice (Zone 4), mainstem South Fork Holston River since 1965. Holston River (Zone 6), and Horse Creek (Zones HC1and HC2), the approximate locations of which are shown below. The design of the 2010 study was very similar to that of previous surveys, allowing comparisons among surveys. In addition, two areas of potential local impacts were assessed for the first time: Big Tree Spring (BTS, located on the South Fork within Zone 2) and Kit Bottom (KU and KL in the Big Sluice, upstream of Zone 4). -
A Review of the Late Jurassic–Early Cretaceous Charophytes from The
A review of the Late Jurassic–Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France Roch-Alexandre Benoit, Didier Néraudeau, Carles Martin-Closas To cite this version: Roch-Alexandre Benoit, Didier Néraudeau, Carles Martin-Closas. A review of the Late Jurassic– Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France. Cretaceous Research, Elsevier, 2017, 79, pp.199-213. <10.1016/j.cretres.2017.07.009>. <insu-01574653> HAL Id: insu-01574653 https://hal-insu.archives-ouvertes.fr/insu-01574653 Submitted on 16 Aug 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Accepted Manuscript A review of the Late Jurassic–Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France Roch-Alexandre Benoit, Didier Neraudeau, Carles Martín-Closas PII: S0195-6671(17)30121-0 DOI: 10.1016/j.cretres.2017.07.009 Reference: YCRES 3658 To appear in: Cretaceous Research Received Date: 13 March 2017 Revised Date: 5 July 2017 Accepted Date: 17 July 2017 Please cite this article as: Benoit, R.-A., Neraudeau, D., Martín-Closas, C., A review of the Late Jurassic–Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France, Cretaceous Research (2017), doi: 10.1016/j.cretres.2017.07.009. -
Joseph Steven Davis
JOSEPH STEVEN DAVIS CURRICULUM VITAE Address: 3177A McCarty Hall, Department of Botany, University of Florida, Gainesville, Florida 32611 Office Telephone number: (352) 392-1094 Home Telephone number: (352) 373-7186, Fax Number: (352) 392- 3993, e-mail: [email protected] of Floridal.edu Date of birth: 18 July, 1929 Marital status: Married, two sons Health: Excellent Professor Emeritus: December 31, 2007 Educational Background: State University of Iowa Botany PhD 1960 State University of Iowa Science Education MS 1956 State University of Iowa Zoology BA 1951 Post Doctoral Study: 1961 - Hopkins Marine Station, Stanford University (Summer) 1962 - Hopkins Marine Station, Stanford University (Summer) 1963 - Botanical Institute, University of Vienna (Academic Year) 1964 - Freshwater Biological Association, Ambleside, England (Summer) 1985 - Station Biologique de Roscoff, Roscoff, France Languages: German - read scientific literature with ease. Employment: JOSEPH STEVEN DAVIS 2 University of Florida Professor 1977-2007 University of Florida Associate Professor 1969 -1977 (tenure-accruing) University of Florida Assistant Professor 1966-1970 (tenure-accruing) Southern Illinois University Assistant Professor 1960-1966 (tenure-accruing) Southern Illinois University Instructor 1959-1960 (tenure-accruing) Southern Illinois University Co-Chairman, biology department, 1960-1964. Areas of Specialization Specializations lie with ecological and taxonomic aspects of soil and airborne algae of Florida, taxonomy and morphology of marine and freshwater algae, effects of fire on soil algae, biological and chemical aspects of tUniversity of Floridaa formation, and ecological aspects of hypersaline organisms relative to their management for the production of sodium chloride from seawater and inland brines. Courses Taught at the University of Florida, Gainesville General Botany (BOT 180). Responsible for all the lectures, test construction and administration, and student advisement.