Research Article: Otolith Shape Analysis of Three Mudskipper
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Ecography ECOG-01937 Hattab, T., Leprieur, F., Ben Rais Lasram, F., Gravel, D., Le Loc’H, F
Ecography ECOG-01937 Hattab, T., Leprieur, F., Ben Rais Lasram, F., Gravel, D., Le Loc’h, F. and Albouy, C. 2016. Forecasting fine- scale changes in the food-web structure of coastal marine communities under climate change. – Ecography doi: 10.1111/ecog.01937 Supplementary material Forecasting fine-scale changes in the food-web structure of coastal marine communities under climate change by Hattab et al. Appendix 1 List of coastal exploited marine species considered in this study Species Genus Order Family Class Trophic guild Auxis rochei rochei (Risso, 1810) Auxis Perciformes Scombridae Actinopterygii Top predators Balistes capriscus Gmelin, 1789 Balistes Tetraodontiformes Balistidae Actinopterygii Macro-carnivorous Boops boops (Linnaeus, 1758) Boops Perciformes Sparidae Actinopterygii Basal species Carcharhinus plumbeus (Nardo, 1827) Carcharhinus Carcharhiniformes Carcharhinidae Elasmobranchii Top predators Dasyatis pastinaca (Linnaeus, 1758) Dasyatis Rajiformes Dasyatidae Elasmobranchii Top predators Dentex dentex (Linnaeus, 1758) Dentex Perciformes Sparidae Actinopterygii Macro-carnivorous Dentex maroccanus Valenciennes, 1830 Dentex Perciformes Sparidae Actinopterygii Macro-carnivorous Diplodus annularis (Linnaeus, 1758) Diplodus Perciformes Sparidae Actinopterygii Forage species Diplodus sargus sargus (Linnaeus, 1758) Diplodus Perciformes Sparidae Actinopterygii Macro-carnivorous (Geoffroy Saint- Diplodus vulgaris Hilaire, 1817) Diplodus Perciformes Sparidae Actinopterygii Basal species Engraulis encrasicolus (Linnaeus, 1758) Engraulis -
Neogobius Melanostomus (Pallas, 1814) Lacking the Black Spot on the fi Rst Dorsal fi N – a Morphometric and Meristic Comparison
Bulletin of Fish Biology Volume 16 Nos. 1/2 31.12.2016 1-14 Neogobius melanostomus (Pallas, 1814) lacking the black spot on the fi rst dorsal fi n – a morphometric and meristic comparison Neogobius melanostomus (Pallas, 1814) ohne schwarzen Fleck auf der ersten Rückenfl osse – ein morphologischer und meristischer Vergleich Mara Roß*, Iris Woltmann & Heiko Brunken Research Group Fish Ecology, City University of Applied Sciences Bremen, Neustadtswall 30, D-28199 Bremen, Germany *Corresponding author: [email protected] Summary: In 2014 a total of 488 specimens of round gobies was captured in the lower River Weser. These specimens exhibited two distinct pigmentation patterns of the fi rst dorsal fi n. Whereas in approximately 80 % of the individuals the characteristic large oblong black spot on the posterior part of the fi rst dorsal fi n was present, it was lacking in about 20 % of the specimens. This black spot is regarded as an important feature in species identifi cation. 200 voucher specimens, 100 individuals with spot and 100 lacking the typi- cal spot, were analyzed morphologically and meristically and compared statistically. Despite some scattered differences (i.e. ratio of preventral distance/standard length, the number of mid-lateral scales and number of mid-lateral scales of the caudal fi n) the two groups broadly corresponded. The results are consistent with fi ndings from invasive N. melanostomus in Lake Erie/North America, where a similar variation in pigmentation pattern was observed. Thus we assign the specimens of gobies exhibiting morphological characteristics of round gobies but lacking the black spot on the dorsal fi n to the species N. -
Ecology, Biology and Taxonomy. Mudskippers
Chapter of the edited collection: Mangroves: Ecology, Biology and Taxonomy. Mudskippers: human use, ecotoxicology and biomonitoring of mangrove and other soft bottom intertidal ecosystems. Gianluca Polgar 1 and Richard Lim 2 1Institute of Biological Sciences, Institute of Ocean and Earth Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia. Tel. +603-7967-4609 / 4182; e-mail: [email protected] / [email protected]. Web site: www.themudskipper.org 2Centre for Environmental Sustainability, School of the Environment, Faculty of Science, University of Technology Sydney, Broadway, New South Wales 2007, Australia. e-mail: [email protected] Abstract (269) Mudskippers (Gobiidae: Oxudercinae) are air-breathing gobies, which are widely distributed throughout the West African coast and the Indo-Pacific region. They are closely linked to mangrove and adjacent soft bottom peri-tidal ecosystems. Some species are amongst the best adapted fishes to an amphibious lifestyle. All mudskippers are benthic burrowers in anoxic sediments, and since tidal mudflats are efficient sediment traps, and sinks for nutrients and other chemical compounds, they are constantly in contact with several types of pollutants produced by industrial, agricultural and domestic activities. Due to their natural abundance, considerable resistance to highly polluted conditions, and their benthic habits, mudskippers are frequently used in aquatic ecotoxicological studies. For the same reasons, mudskippers also frequently occur in urbanised or semi-natural coastal areas. Since several species are widely consumed throughout their whole geographical range, these same characteristics also facilitate their aquaculture in several countries, such as Bangladesh, Thailand, Philippines, China, Taiwan and Japan. Even when not directly used, mudskippers are often abundant and are important prey items for many intertidal transient species (marine visitors), and several species of shorebirds. -
Habitat Use of Invasive Monkey Goby (Neogobius Fluviatilis) And
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Repository of the Academy's Library Hydrobiologia (2019) 846:147–158 https://doi.org/10.1007/s10750-019-04060-9 (0123456789().,-volV)( 0123456789().,-volV) PRIMARY RESEARCH PAPER Habitat use of invasive monkey goby (Neogobius fluviatilis) and pumpkinseed (Lepomis gibbosus) in Lake Balaton (Hungary): a comparison of electrofishing and fyke netting István Czeglédi . Bálint Preiszner . Zoltán Vitál . Bernadett Kern . Nóra Boross . András Specziár . Péter Takács . Tibor Erős Received: 5 February 2019 / Revised: 23 August 2019 / Accepted: 26 August 2019 / Published online: 6 September 2019 © The Author(s) 2019 Abstract Detailed knowledge on the habitat pref- assessing habitat use and population structure of erence of invasive fishes and the bias of different invasive fishes. fishing methods in determining their population dynamic parameters are essential in fisheries man- Keywords Non-native fish · agement, ecology and conservation. This study was Anthropogenic habitat degradation · conducted to determine the habitat use and length Sampling methods · Habitat preference · frequency distribution of the invasive monkey goby Large lakes and pumpkinseed in the littoral zone of Lake Balaton (Hungary) using two different sampling methods, electrofishing and fyke netting. In general, both Introduction species preferred anthropogenically modified habitat types (rip-rap shorelines and harbours) compared Biological invasions are major contributors to the loss with natural reed habitats with silty-sand bottom. of biodiversity and the homogenisation of biota Length frequency distribution data showed significant worldwide (Rahel, 2000; Clavero & Garcı´a-Berthou, between-gear differences, since electrofishing 2005; Dudgeon et al., 2006). Human activity is resulted in the capture of larger individuals in greater rapidly transforming natural ecosystems and habitats proportion than fyke nets for both species. -
Arrival of Round Goby Neogobius Melanostomus (Pallas, 1814) and Bighead Goby Ponticola Kessleri (Günther, 1861) in the High Rhine (Switzerland)
BioInvasions Records (2013) Volume 2, Issue 1: 79–83 Open Access doi: http://dx.doi.org/10.3391/bir.2013.2.1.14 © 2013 The Author(s). Journal compilation © 2013 REABIC Short Communication Arrival of round goby Neogobius melanostomus (Pallas, 1814) and bighead goby Ponticola kessleri (Günther, 1861) in the High Rhine (Switzerland) Irene Kalchhauser*, Peter Mutzner, Philipp E. Hirsch and Patricia Burkhardt-Holm Program Man-Society-Environment, Dept. of Environmental Sciences, University of Basel, Vesalgasse 1, 4051 Basel, Switzerland E-mail: [email protected] (IK), [email protected] (PM), [email protected] (PEH), [email protected] (PBH) *Corresponding author Received: 20 July 2012 / Accepted: 31 October 2012 / Published online: 22 November 2012 Handling editor: Vadim Panov Abstract A number of Ponto-Caspian gobiid species are currently invading European coasts and freshwaters. They do not only present a nuisance to fishermen, but evidence suggests that they compete with native benthic fishes and may contribute to changes in ecosystem function. This paper reports the presence of round goby Neogobius melanostomus individuals and an established population of bighead goby Ponticola kessleri in the High Rhine. Key words: gobiidae; non-native; alien; invasion; High Rhine; Switzerland 2001) was predicted to promote westward Introduction migration of fish species (Balon et al. 1986), including Ponto-Caspian gobiids (Proterorhinus Several goby species from the Caspian and Black marmoratus). In the meantime, five of six gobiid Sea are currently spreading in European rivers. species predicted to invade the Rhine (Freyhof Ponticola kessleri (Günther, 1861; Neilson and 2003) have indeed arrived. Their dispersal Stepien 2009), Neogobius melanostomus (Pallas, appears to be facilitated by shipping, as round 1814), Proterorhinus marmoratus (Pallas, 1814), goby dispersal has followed shipping routes Neogobius fluviatilis (Pallas, 1814), and Babka (Brown and Stepien 2009; LaRue et al. -
Caspian Goby (Neogobius Caspius) Ecological Risk Screening Summary
Caspian Goby (Neogobius caspius) Ecological Risk Screening Summary U.S. Fish and Wildlife Service, March 2012 Revised, August 2018 Web Version, 8/2/2019 Photo: K. Abbasi. Licensed under CC BY-SA 3.0. Available: http://eol.org/pages/207518/overview. (August 2018). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2018): “Europe and Asia: Caspian Sea.” From Eschmeyer et al. (2018): “Distribution: Caspian Sea basin, Eurasia.” Status in the United States There are no known occurrences in the United States. It does not appear that this species is in the trade in the United States based on a search of the literature and online aquarium retailers. Means of Introductions in the United States There are no known occurrences in the United States. 1 2 Biology and Ecology Taxonomic Hierarchy and Taxonomic Standing From ITIS (2018): “Kingdom Animalia Subkingdom Bilateria Infrakingdom Deuterostomia Phylum Chordata Subphylum Vertebrata Infraphylum Gnathostomata Superclass Actinopterygii Class Teleostei Superorder Acanthopterygii Order Perciformes Suborder Gobioidei Family Gobiidae Genus Neogobius Species Neogobius caspius (Eichwald, 1831)” From Eschmeyer et al. (2018): “Current status: Valid as Neogobius caspius (Eichwald 1831). Gobiidae: Gobiinae.” Size, Weight, and Age Range From Froese and Pauly (2018): “Max length : 34.5 cm TL male/unsexed; [Berg 1965]” Environment From Froese and Pauly (2018): “Brackish; demersal.” Climate/Range From Froese and Pauly (2018): “Temperate” Distribution Outside the United States Native From Froese and Pauly (2018): “Europe and Asia: Caspian Sea.” 2 From Eschmeyer et al. (2018): “Distribution: Caspian Sea basin, Eurasia.” Introduced No known introductions. Means of Introduction Outside the United States No known introductions. -
Regional Fish-Based Biostratigraphy of the Late Neogene and Pleistocene of Southeastern Europe
Vestnik zoologii, 51(5): 375–392, 2017 DOI 10.1515/vzoo-2017-0045 UDC 551.7(82+9):567.5(47) REGIONAL FISH-BASED BIOSTRATIGRAPHY OF THE LATE NEOGENE AND PLEISTOCENE OF SOUTHEASTERN EUROPE О. М. Kovalchuk National Museum of Natural History NAS of Ukraine, B. Khmelnitsky st., 15, Kyiv, 01030 Ukraine E-mail: [email protected] Regional Fish-Based Biostratigraphy of the Late Neogene and Pleistocene of Southeastern Europe. Kovalchuk, О. М. — Th is paper presents analytical results of the study of numerous freshwater fi sh fossils from almost 40 localities in the territory of southeastern Europe. It has been established that freshwater fi shes can be regarded as parastratigraphic group suitable for biostratigraphic studies. Ten ichthyofaunal assemblages have been distinguished and characterized in the paper. Th ese assemblages represent successive developmental stages in freshwater fi sh communities within southeastern Europe during the late Miocene, Pliocene and Pleistocene. Indices of evolutionary transformations (extinction rate, origination rate, taxonomic rotation) for ichthyofaunal assemblages have been calculated, and their trend is discussed herein. Key words: freshwater fi shes, faunal assemblage, evolution, Cenozoic, Eastern Europe. Introduction Th e modern zoogeographical structure of freshwater ichthyofauna of the Northern hemisphere was formed in general terms during the late Cenozoic (Sytchevskaya, 1989). Restoration of the key stages and features of this process is impossible without a detailed study of numerous fossil remains of bony fi shes, originating from alluvial deposits of heterochronous localities. Th e historical and faunal analysis of paleoichthyological material from the south of Eastern Europe allows us tracing the temporal change in the groups of freshwater fi sh, to determine the time of appearance of individual modern taxa and their groups in the paleontological record, to fi nd out the centers of their origin and ways of distribution, as well as to indicate some regional features of the formation of their ranges in time. -
A Dissertation Entitled Evolution, Systematics
A Dissertation Entitled Evolution, systematics, and phylogeography of Ponto-Caspian gobies (Benthophilinae: Gobiidae: Teleostei) By Matthew E. Neilson Submitted as partial fulfillment of the requirements for The Doctor of Philosophy Degree in Biology (Ecology) ____________________________________ Adviser: Dr. Carol A. Stepien ____________________________________ Committee Member: Dr. Christine M. Mayer ____________________________________ Committee Member: Dr. Elliot J. Tramer ____________________________________ Committee Member: Dr. David J. Jude ____________________________________ Committee Member: Dr. Juan L. Bouzat ____________________________________ College of Graduate Studies The University of Toledo December 2009 Copyright © 2009 This document is copyrighted material. Under copyright law, no parts of this document may be reproduced without the expressed permission of the author. _______________________________________________________________________ An Abstract of Evolution, systematics, and phylogeography of Ponto-Caspian gobies (Benthophilinae: Gobiidae: Teleostei) Matthew E. Neilson Submitted as partial fulfillment of the requirements for The Doctor of Philosophy Degree in Biology (Ecology) The University of Toledo December 2009 The study of biodiversity, at multiple hierarchical levels, provides insight into the evolutionary history of taxa and provides a framework for understanding patterns in ecology. This is especially poignant in invasion biology, where the prevalence of invasiveness in certain taxonomic groups could -
An Early Oligocene Fish-Fauna from Japan Reconstructed from Otoliths
3 Zitteliana 90 An Early Oligocene fish-fauna from Japan reconstructed from otoliths Paläontologie GeoBio- 1 2 3 Bayerische Werner Schwarzhans *, Fumio Ohe & Yusuke Ando & Geobiologie Staatssammlung Center LMU München für Paläontologie und Geologie LMU München 1Ahrensburger Weg 103, D-22359 Hamburg, and Natural History Museum of Denmark, Zoological n München, 2017 Museum, Universitetsparken 15, DK-2100 Copenhagen, Denmark 2Nara National Research Institute for Cultural Properties, Nara 630-8577, Japan n Manuscript received 3Mizunami Fossil Museum, Mizunami, Gifu Prefecture 509-6132, Japan 27.04.2016; revision accepted 07.09.2016; *Corresponding author; E-mail: [email protected] available online: 30.05.2017 n ISSN 0373-9627 n ISBN 978-3-946705-02-4 Zitteliana 90, 3–26. Abstract The otoliths described in this study from the Late Eocene to Early Oligocene (biozone P18) of the Kishima Formation near Karatsu, Saga Prefecture, represent the earliest record of fossil otoliths from Japan and in fact the entire Northwest Pacific. They were obtained from outcrops along the Shimohirano River. A total of 13 otolith-based teleost taxa are recognized, 11 of which being identifiable to species level and new to science and five new genera. The new otolith-based genera are: Nishiberyx n. gen. (Berycidae), Sagaberyx n. gen. (Berycoidei family indet.), Namicauda n. gen. (Polymixiidae), Ortugobius n. gen. (tentatively placed in Gobiidae) and Cornusolea n. gen. (Soleidae); the new species are: Rhynchoconger placidus n. sp., Rhynchoconger subtilis n. sp., Saurida macilenta n. sp., Nishiberyx nishimotoi n. sp., Sagaberyx kishimaensis n. sp., Namicauda pulvinata n. sp., Liza brevirostris n. sp., Pontinus? karasawai n. sp., Ortugo- bius cascus n. -
Leeches on Mudskippers: Host–Parasite Interaction at the Water's
J. Parasitol., 95(4), 2009, pp. 1021–1025 – RESEARCH NOTES Leeches on Mudskippers: Host–Parasite Interaction at the Water’s Edge G. Polgar 1, E. M. Burreson 2, F. Stefani 3, and E. Kamrani 4 1Dipartimento di Biologia Animale e dell’Uomo, Istituto di Zoologia, University of Rome ‘‘La Sapienza,’’ V.le dell’Università, 32, 00195 Rome (RM) Italy; 2Environmental and Aquatic Animal Health, Virginia Institute of Marine Science, College of William and Mary, P.O. Box 1346 Gloucester Point, Virginia, 23062; 3Dipartimento di Biotecnologie e Bioscienze, University of Milano-Bicocca, P.za della Scienza, 2, 20126 Milan, Italy; 4Fisheries and Marine Biology Department, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran 79169-69389. 1e-mail: [email protected] (now [email protected] ) The original publication (Journal of Parasitology, 2009, 95(4):1021–1025 - doi: 10.1645/GE-1718.1), is available at journalofparasitology.org (http://www.journalofparasitology.org/doi/abs/10.1645/GE-1718.1) to authorized users. ABSTRACT A host–parasite relationship was observed, for the first time, between a piscicolid leech and a species of amphibious goby ( Scartelaos tenuis ) from an intertidal mud flat in southern Iran. Morphological and molecular investigations assign the leech to Zeylanicobdella arugamensis . Of the 3 endemic and sympatric mudskipper species living in the Persian Gulf ( S. tenuis , Boleophthalmus dussumieri , and Periophthalmus waltoni ), leeches were only found on S. tenuis (prevalence and mean intensity = 71.4% and 2.3 ± 2.5, respectively), which is also the most- aquatic mudskipper species. Scartelaos tenuis is not the largest species, but more leeches ( ≥ 4 leeches/host) were found on larger specimens (> 12 cm standard length [SL]). -
Age and Growth, Reproduction and Diet of a Sublittoral Population of the Rock Goby Gobius Paganellus (Teleostei, Gobiidae)
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Repositório da Universidade dos Açores Hydrobiologia 440: 129–135, 2000. 129 M.B. Jones, J.M.N. Azevedo, A.I. Neto, A.C. Costa & A.M. Frias Martins (eds), Island, Ocean and Deep-Sea Biology. © 2000 Kluwer Academic Publishers. Printed in the Netherlands. Age and growth, reproduction and diet of a sublittoral population of the rock goby Gobius paganellus (Teleostei, Gobiidae) Jose´ Manuel N. Azevedo & Ana Maria V. Simas Departamento de Biologia, Universidade dos Açores, Rua Mãe de Deus, 9500 Ponta Delgada, Portugal Tel. + 351 296 653044. E-mail: [email protected] Key words: fish biology, length–weight relationship, length–frequency distributions, modal analysis, growth rate, life span Abstract Basic biological information for a sublittoral population of the rock goby Gobius paganellus Linnaeus, 1758 is presented based on a 2-year study involving 1680 specimens. The length–weight relationship was given by TW = 0.0089 ∗ TL3:163 (where TW= total weight in g; TL= total length in mm). Age at length data were inferred by modal analysis of the monthly length–frequency distributions. The parameters of the fitted Von Bertalanffy growth −1 equation (with seasonal component, birth date on the 1st of January) were L1 = 13.8 cm; K =0.73yr ; to = −0.22 yr; C = 0.95; W = 0.07. This growth rate is much higher than that described for northern Europe populations (where K is about 0.3 yr−1) and is probably associated with a shorter life span. Macroscopic examination of the gonads, and analysis of the monthly values of the gonadosomatic index, indicated that reproduction occurs in winter and early spring, with a maximum in February and March, when water temperatures are lowest.