Neoceratium Gen. Nov., a New Genus for All Marine Species Currently Assigned to Ceratium (Dinophyceae)

Total Page:16

File Type:pdf, Size:1020Kb

Neoceratium Gen. Nov., a New Genus for All Marine Species Currently Assigned to Ceratium (Dinophyceae) ARTICLE IN PRESS Protist, Vol. ], ]]]–]]], ]] ]]]] http://www.elsevier.de/protis Published online date 10 August 2009 ORIGINAL PAPER Neoceratium gen. nov., a New Genus for All Marine Species Currently Assigned to Ceratium (Dinophyceae) Fernando Gomez´ a,1, David Moreirab, and Purificacion´ Lopez-Garc´ ıa´ b aObservatoire Oceanologique de Banyuls sur Mer, Universite Pierre et Marie Curie, CNRS UMR 7621, Avenue du Fontaule, BP 44, F-66651 Banyuls sur Mer, France bUnite d’Ecologie, Systematique et Evolution, CNRS UMR 8079, Universite Paris-Sud, Batimentˆ 360, 91405 Orsay Cedex, France Submitted October 23, 2008; Accepted June 13, 2009 Monitoring Editor: Marina Montresor The dinoflagellate genus Ceratium contains marine and freshwater species. Freshwater species possess six cingular plates, thick plates in the concave ventral area and usually develop a third hypothecal horn. The marine Ceratium species (462 species) possess five cingular plates and thin plates in the concave ventral area; a third hypothecal horn is atypical. Resting cysts, a common feature in the freshwater species, are unreported in marine species. We illustrate for the first time resting cysts in marine Ceratium species (C. furca and C. candelabrum). We obtained small subunit ribosomal RNA gene (SSU rDNA) sequences of 23 Ceratium species (more than one third of the total marine species described so far), with representatives of the four acknowledged subgenera. Phylogenetic analyses including the type species, the freshwater C. hirundinella, showed that the four available sequences of freshwater species formed a strongly supported subclade, very distant from the marine cluster. Our data support the splitting of Ceratium sensu lato into two genera. Ceratium sensu stricto should be reserved for freshwater species possessing six cingular plates (three cingular plates in dorsal view). The new genus name, Neoceratium gen. nov. should be applied to the marine species of Ceratium sensu lato that possess five cingular plates (two cingular plates in dorsal view). & 2009 Elsevier GmbH. All rights reserved. Key words: alveolate evolution; Dinoflagellata; Neoceratium gen. nov.; new combination; resting cyst; SSU rDNA phylogeny. Introduction The genus Ceratium Schrank is the earliest genus easy to collect, while the tough theca ensures name in use for a dinoflagellate (Schrank 1793) that morphological features essential for taxo- and is one of the most important phytoplankton nomic analysis are preserved. The genus contains components. The large cell size of Ceratium species, mainly 100-300 mm long, make them Abbreviations: PCR, Polymerase chain reaction; SSU, small subunit; GPP complex (Gymnodiniales, 1Corresponding author; fax +33 468887398 Peridiniales, Prorocentrales) complex; rDNA, ribo- e-mail fernando.gomez@fitoplancton.com (F. Gomez).´ somal deoxyribonucleic acid & 2009 Elsevier GmbH. All rights reserved. doi:10.1016/j.protis.2009.06.004 Please cite this article as: Gomez´ F, et al. Neoceratium gen. nov., a New Genus for All Marine Species Currently Assigned to Ceratium (Dinophyceae), Protist (2009), doi:10.1016/j.protis.2009.06.004 ARTICLE IN PRESS 2 F. G omez´ et al. a large number of species that are truly planktonic tabulation as a criterion for species diagnosis. and widely distributed in all seas and epiconti- Vanhoffen’s¨ genera were ranked as subgenera: nental waters. More than 120 marine species and Amphiceratium (Vanhoffen)¨ Ostenfeld (Ostenfeld infraspecies, varieties or forms, have been 1903; Paulsen 1908), Biceratium (Vanhoffen)¨ described and about 62 out of them are con- Ostenfeld (Ostenfeld 1903; Paulsen 1908), sidered valid (Gomez´ 2005). Only four species, Archaeceratium Jørgensen ((Jørgensen 1911) with numerous varieties, have colonized epiconti- =Poroceratium (Vanhoffen)¨ Pavillard (Pavillard nental waters (Popovsky and Pfiester 1990 1916)) and Ceratium sensu stricto was named Popovsky and Pfiester 1990). Tripoceratium Kofoid (Kofoid 1909,=Euceratium The first illustrations of Ceratium appeared in (Gran) Ostenfeld (Gran 1902; Ostenfeld 1903), the classic work of O.F. Muller¨ (1786) that =Orthoceratium Sournia (Sournia 1968)). Each described one freshwater and one marine species subgenus was further divided into sections and as Bursaria hirundinella O.F. Muller¨ and Cercaria subsections based on the cell contour similarities tripos O.F. Muller,¨ respectively. Under these gen- (Bohm¨ 1931; Gran 1902; Jørgensen 1911, 1920; era, O.F. Muller¨ described also other organisms Karsten 1907; Kofoid 1909; Ostenfeld 1903; that were not related to dinoflagellates (Muller¨ Paulsen 1908; Pavillard 1907). The freshwater 1786). Schrank (1793, 1802) created the genus species of Ceratium (section Cornuta) were placed Ceratium for the species C. pleuroceras, C. in the subgenus Biceratium (Jørgensen 1911; tetraceras and later C. macroceras from material Schiller 1937; Sournia 1968). collected in a lake in central Europe. Nitzsch The subgenus Tripoceratium exhibits the classi- (1817) realized that Cercaria tripos O.F. Muller¨ cal ‘anchor’ shape in which both antapical horns belonged to Schrank’s genus and made the proceed laterally after leaving the body (e.g. C. transfer into Ceratium. Marine and freshwater tripos). Biceratium includes species characterized species of Ceratium described thereafter were by a distinct apical horn and unequal antapical placed under Schrank’s genus. Bursaria hirundi- horns that are directed posteriorly (e.g. C. furca). nella O.F. Muller¨ was also transferred into Cer- Archaeceratium was created for a few rare atium (Dujardin 1841). The specimens described species that have a high flattened apical horn by Schrank (1793) - i.e. C. pleuroceras, C. (e.g. C. gravidum). The subgenus Amphiceratium tetraceras and C. macroceras - corresponded to (contains a few elongated species with both Bursaria hirundinella and consequently they are hypothecal horns directed posteriorly. The right regarded as synonyms of C. hirundinella (O.F. horn is greatly reduced and the left one is often Muller)¨ Dujardin (Popovski and Pfiester 1990). very extended (e.g. C. fusus). However, the name of the type species of the The morphology of the freshwater and marine genus Ceratium has to be designed from the Ceratium species has been investigated in detail Schrank’s species epithet: C. pleuroceras or C. with optical (Bourrelly 1968; Entz 1927), and tetraceras. Loeblich Jr and Loeblich III (1966) transmission and scanning electron microscopy considered C. pleuroceras, the first of the species (Dodge and Crawford 1970; Wetherbee 1975). In mentioned by Schrank (1793), as the type species older literature, the nomenclature of the thecal of the genus. However, the International Code of plates varies among authors, until Kofoid (1907a) Botanical Nomenclature (Farr et al. 1979) gave the proposed a new system of tabulation that was priority to the lectotypification of C. tetraceras, the widely accepted. After the analysis of seventeen second species cited by Schrank, by Dujardin marine species, Kofoid (1907a) concluded that (1841). Ceratium have four apical (40), four precingular Vanhoffen¨ (1896) questioned the unity of the (400), four cingular (4c), five postcingular (5000) and genus Ceratium and proposed its split into four two antapical (20000) plates. Kofoid (1907a) did not genera based on the shape of the cell body and investigate the plates of the concave ventral area horns: Amphiceratium, Biceratium, Poroceratium, that are highly delicate in the marine species and and Ceratium sensu stricto. Kofoid (1907a) stu- he erroneously considered four precingular plates died the tabulation of seventeen marine species (400) instead of five (500). The plates of the concave with representatives of each subgenus. He ventral area are more robust in the freshwater demonstrated the unity of the tabulation within species and Entz (1927, p. 350) illustrated that this the genus and rejected the split of Ceratium into area was composed of three large plates (X, Y, Z) four genera proposed by Vanhoffen.¨ This drove plus several sulcal platelets. He considered the further studies of Ceratium towards the analysis of plate X as the sixth precingular plate. Entz (1927) the silhouettes and ornamentation rather than the did not illustrate the cingular plates. Bourrelly Please cite this article as: Gomez´ F, et al. Neoceratium gen. nov., a New Genus for All Marine Species Currently Assigned to Ceratium (Dinophyceae), Protist (2009), doi:10.1016/j.protis.2009.06.004 ARTICLE IN PRESS Neoceratium, New Genus for Marine Ceratium Species 3 (1968) examined three freshwater species and Ceratium and obtained strong support for the observed five cingular plates, whereas the marine separation of freshwater and marine species into species had only four (Kofoid had not examined two different genera. In addition to the phylogeny any freshwater species when he proposed the results, our observations allowed us to discuss the tabulational unity of Ceratium in 1907). The validity of some morphological characters that are dinoflagellate cingular and hypothecal plates are used for the diagnostic separation between considered more conservative and stable taxono- marine and freshwater species. For example, mical characters than those of the epitheca although resting cysts are common in freshwater (Balech 1980). Nevertheless, the split of the genus species but were unknown from marine ones, we based on the different number of cingular plates in report their existence in at least two marine marine and freshwater species has been a matter
Recommended publications
  • Molecular Data and the Evolutionary History of Dinoflagellates by Juan Fernando Saldarriaga Echavarria Diplom, Ruprecht-Karls-Un
    Molecular data and the evolutionary history of dinoflagellates by Juan Fernando Saldarriaga Echavarria Diplom, Ruprecht-Karls-Universitat Heidelberg, 1993 A THESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE STUDIES Department of Botany We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA November 2003 © Juan Fernando Saldarriaga Echavarria, 2003 ABSTRACT New sequences of ribosomal and protein genes were combined with available morphological and paleontological data to produce a phylogenetic framework for dinoflagellates. The evolutionary history of some of the major morphological features of the group was then investigated in the light of that framework. Phylogenetic trees of dinoflagellates based on the small subunit ribosomal RNA gene (SSU) are generally poorly resolved but include many well- supported clades, and while combined analyses of SSU and LSU (large subunit ribosomal RNA) improve the support for several nodes, they are still generally unsatisfactory. Protein-gene based trees lack the degree of species representation necessary for meaningful in-group phylogenetic analyses, but do provide important insights to the phylogenetic position of dinoflagellates as a whole and on the identity of their close relatives. Molecular data agree with paleontology in suggesting an early evolutionary radiation of the group, but whereas paleontological data include only taxa with fossilizable cysts, the new data examined here establish that this radiation event included all dinokaryotic lineages, including athecate forms. Plastids were lost and replaced many times in dinoflagellates, a situation entirely unique for this group. Histones could well have been lost earlier in the lineage than previously assumed.
    [Show full text]
  • Patrons De Biodiversité À L'échelle Globale Chez Les Dinoflagellés
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emerciements* ! Remerciements* A!l'issue!de!ce!travail!de!recherche!et!de!sa!rédaction,!j’ai!la!preuve!que!la!thèse!est!loin!d'être!un!travail! solitaire.! En! effet,! je! n'aurais! jamais! pu! réaliser! ce! travail! doctoral! sans! le! soutien! d'un! grand! nombre! de! personnes!dont!l’amitié,!la!générosité,!la!bonne!humeur%et%l'intérêt%manifestés%à%l'égard%de%ma%recherche%m'ont% permis!de!progresser!dans!cette!phase!délicate!de!«!l'apprentiGchercheur!».!
    [Show full text]
  • 28-Protistsf20r.Ppt [Compatibility Mode]
    9/3/20 Ch 28: The Protists (a.k.a. Protoctists) (meet these in more detail in your book and lab) 1 Protists invent: eukaryotic cells size complexity Remember: 1°(primary) endosymbiosis? -> mitochondrion -> chloroplast genome unicellular -> multicellular 2 1 9/3/20 For chloroplasts 2° (secondary) happened (more complicated) {3°(tertiary) happened too} 3 4 Eukaryotic “supergroups” (SG; between K and P) 4 2 9/3/20 Protists invent sex: meiosis and fertilization -> 3 Life Cycles/Histories (Fig 13.6) Spores and some protists (Humans do this one) 5 “Algae” Group PS Pigments Euglenoids chl a & b (& carotenoids) Dinoflagellates chl a & c (usually) (& carotenoids) Diatoms chl a & c (& carotenoids) Xanthophytes chl a & c (& carotenoids) Chrysophytes chl a & c (& carotenoids) Coccolithophorids chl a & c (& carotenoids) Browns chl a & c (& carotenoids) Reds chl a, phycobilins (& carotenoids) Greens chl a & b (& carotenoids) (more groups exist) 6 3 9/3/20 Name word roots (indicate nutrition) “algae” (-phyt-) protozoa (no consistent word ending) “fungal-like” (-myc-) Ecological terms plankton phytoplankton zooplankton 7 SG: Excavata/Excavates “excavated” feeding groove some have reduced mitochondria (e.g.: mitosomes, hydrogenosomes) 8 4 9/3/20 SG: Excavata O: Diplomonads: †Giardia Cl: Parabasalids: Trichonympha (bk only) †Trichomonas P: Euglenophyta/zoa C: Kinetoplastids = trypanosomes/hemoflagellates: †Trypanosoma C: Euglenids: Euglena 9 SG: “SAR” clade: Clade Alveolates cell membrane 10 5 9/3/20 SG: “SAR” clade: Clade Alveolates P: Dinoflagellata/Pyrrophyta:
    [Show full text]
  • The Planktonic Protist Interactome: Where Do We Stand After a Century of Research?
    bioRxiv preprint doi: https://doi.org/10.1101/587352; this version posted May 2, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Bjorbækmo et al., 23.03.2019 – preprint copy - BioRxiv The planktonic protist interactome: where do we stand after a century of research? Marit F. Markussen Bjorbækmo1*, Andreas Evenstad1* and Line Lieblein Røsæg1*, Anders K. Krabberød1**, and Ramiro Logares2,1** 1 University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N- 0316 Oslo, Norway 2 Institut de Ciències del Mar (CSIC), Passeig Marítim de la Barceloneta, 37-49, ES-08003, Barcelona, Catalonia, Spain * The three authors contributed equally ** Corresponding authors: Ramiro Logares: Institute of Marine Sciences (ICM-CSIC), Passeig Marítim de la Barceloneta 37-49, 08003, Barcelona, Catalonia, Spain. Phone: 34-93-2309500; Fax: 34-93-2309555. [email protected] Anders K. Krabberød: University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N-0316 Oslo, Norway. Phone +47 22845986, Fax: +47 22854726. [email protected] Abstract Microbial interactions are crucial for Earth ecosystem function, yet our knowledge about them is limited and has so far mainly existed as scattered records. Here, we have surveyed the literature involving planktonic protist interactions and gathered the information in a manually curated Protist Interaction DAtabase (PIDA). In total, we have registered ~2,500 ecological interactions from ~500 publications, spanning the last 150 years.
    [Show full text]
  • Check List 15 (5): 951–963
    15 5 ANNOTATED LIST OF SPECIES Check List 15 (5): 951–963 https://doi.org/10.15560/15.5.951 Dinoflagellates in tropical estuarine waters from the Maraú River, Camamu Bay, northeastern Brazil Caio Ceza da Silva Nunes1, Sylvia Maria Moreira Susini-Ribeiro1, 2, Kaoli Pereira Cavalcante3 1 Mestrado em Sistemas Aquáticos Tropicais, Universidade Estadual de Santa Cruz, Rodovia Jorge Amado, km 16, Salobrinho, 45662090 Ilhéus, BA, Brazil. 2 Universidade Estadual de Santa Cruz, Rodovia Jorge Amado, km 16, Salobrinho, 45662090 Ilhéus, BA, Brazil. 3 Universidade Estadual Vale do Acaraú, Avenida da Universidade, 850, Campus da Betânia, Betânia, 62040370, Sobral, CE, Brazil. Corresponding author: Caio Ceza da Silva Nunes, [email protected] Abstract Dinoflagellates display great diversity in tropical regions and play an important role in the complex microbial food webs of marine and brackish environments. The goal of this study is to identify planktonic dinoflagellates and their distribution in the estuary of the Maraú River, Camamu Bay, state of Bahia, in a region with increasing use of shellfish farming. Samples were carried out monthly from August 2006 to July 2007 at four stations along the estuary. Plankton was sampled with a 20 μm mesh net. We identified 20 dinoflagellate species. The greatest species richness was ob- served in the genera Protoperidinium (five spp.), Tripos (four spp.), and Prorocentrum (three spp.). Based on literature, six species were classified as potentially harmful: Akashiwo sanguinea, Dinophysis caudata, Gonyaulax spinifera, Prorocentrum micans, Scrippsiella cf. acuminata, and Tripos furca. Protoperidinium venustum was recorded for the first time in coastal waters of Bahia. Keywords Brackish water, Dinophyta, distribution, potentially harmful species, taxonomy.
    [Show full text]
  • Protocols for Monitoring Harmful Algal Blooms for Sustainable Aquaculture and Coastal Fisheries in Chile (Supplement Data)
    Protocols for monitoring Harmful Algal Blooms for sustainable aquaculture and coastal fisheries in Chile (Supplement data) Provided by Kyoko Yarimizu, et al. Table S1. Phytoplankton Naming Dictionary: This dictionary was constructed from the species observed in Chilean coast water in the past combined with the IOC list. Each name was verified with the list provided by IFOP and online dictionaries, AlgaeBase (https://www.algaebase.org/) and WoRMS (http://www.marinespecies.org/). The list is subjected to be updated. Phylum Class Order Family Genus Species Ochrophyta Bacillariophyceae Achnanthales Achnanthaceae Achnanthes Achnanthes longipes Bacillariophyta Coscinodiscophyceae Coscinodiscales Heliopeltaceae Actinoptychus Actinoptychus spp. Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Akashiwo Akashiwo sanguinea Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Amphidinium Amphidinium spp. Ochrophyta Bacillariophyceae Naviculales Amphipleuraceae Amphiprora Amphiprora spp. Bacillariophyta Bacillariophyceae Thalassiophysales Catenulaceae Amphora Amphora spp. Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Anabaenopsis Anabaenopsis milleri Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema Anagnostidinema amphibium Anagnostidinema Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema lemmermannii Cyanobacteria Cyanophyceae Oscillatoriales Microcoleaceae Annamia Annamia toxica Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Aphanizomenon Aphanizomenon flos-aquae
    [Show full text]
  • Differentiating Two Closely Related Alexandrium Species Using Comparative Quantitative Proteomics
    toxins Article Differentiating Two Closely Related Alexandrium Species Using Comparative Quantitative Proteomics Bryan John J. Subong 1,2,* , Arturo O. Lluisma 1, Rhodora V. Azanza 1 and Lilibeth A. Salvador-Reyes 1,* 1 Marine Science Institute, University of the Philippines- Diliman, Velasquez Street, Quezon City 1101, Philippines; [email protected] (A.O.L.); [email protected] (R.V.A.) 2 Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo City, Tokyo 113-8654, Japan * Correspondence: [email protected] (B.J.J.S.); [email protected] (L.A.S.-R.) Abstract: Alexandrium minutum and Alexandrium tamutum are two closely related harmful algal bloom (HAB)-causing species with different toxicity. Using isobaric tags for relative and absolute quantita- tion (iTRAQ)-based quantitative proteomics and two-dimensional differential gel electrophoresis (2D-DIGE), a comprehensive characterization of the proteomes of A. minutum and A. tamutum was performed to identify the cellular and molecular underpinnings for the dissimilarity between these two species. A total of 1436 proteins and 420 protein spots were identified using iTRAQ-based proteomics and 2D-DIGE, respectively. Both methods revealed little difference (10–12%) between the proteomes of A. minutum and A. tamutum, highlighting that these organisms follow similar cellular and biological processes at the exponential stage. Toxin biosynthetic enzymes were present in both organisms. However, the gonyautoxin-producing A. minutum showed higher levels of osmotic growth proteins, Zn-dependent alcohol dehydrogenase and type-I polyketide synthase compared to the non-toxic A. tamutum. Further, A. tamutum had increased S-adenosylmethionine transferase that may potentially have a negative feedback mechanism to toxin biosynthesis.
    [Show full text]
  • Microzooplankton Composition and Dynamics in Lake Erie
    MICROZOOPLANKTON COMPOSITION AND DYNAMICS IN LAKE ERIE A Thesis Presented to The Graduate Faculty of the University of Akron In Partial Fulfillment of the Requirements for the Degree Master of Science Kenneth M. Moats May 2006 MICROZOOPLANKTON COMPOSITION AND DYNAMICS IN LAKE ERIE Kenneth M. Moats Thesis Approved: Accepted: ______________________________ ______________________________ Advisor Department Chair Peter J. Lavrentyev Richard L. Londraville ______________________________ ______________________________ Committee Member Dean of the College R. Joel Duff Ronald F. Levant ______________________________ ______________________________ Committee Member Dean of the Graduate School David M. Klarer George R. Newkome ______________________________ Date ii ACKNOWLEDGEMENTS I would like to thank my graduate advisor Dr. Peter Lavrentyev for introducing me to the study of aquatic microbial ecology and for the opportunity to conduct this study. The importance of his guidance and expertise in every aspect of this research cannot be understated. I would also like to thank him for the patience, support, and encouragement he provided throughout my tenure. I would also like to thank the other members of my advisory committee, Dr. Joel Duff and Dr. David Klarer, for the helpful advice and comments offered during the preparation of this manuscript. I would like to extend my thanks to Dr. Klarer and the staff of Old Woman Creek NERR for logistical support and the sharing of unpublished data on Old Woman Creek. I thank Dr. Frank Jochem of Florida International University, Dr. Henry Vanderploeg and Dr. Stuart Ludsin of Great Lakes Environmental Research Laboratory, and the Captain and crew of the US EPA R/V Lake Guardian for logistical support during the Lake Erie experiments.
    [Show full text]
  • A Parasite of Marine Rotifers: a New Lineage of Dinokaryotic Dinoflagellates (Dinophyceae)
    Hindawi Publishing Corporation Journal of Marine Biology Volume 2015, Article ID 614609, 5 pages http://dx.doi.org/10.1155/2015/614609 Research Article A Parasite of Marine Rotifers: A New Lineage of Dinokaryotic Dinoflagellates (Dinophyceae) Fernando Gómez1 and Alf Skovgaard2 1 Laboratory of Plankton Systems, Oceanographic Institute, University of Sao˜ Paulo, Prac¸a do Oceanografico´ 191, Cidade Universitaria,´ 05508-900 Butanta,˜ SP, Brazil 2Department of Veterinary Disease Biology, University of Copenhagen, Stigbøjlen 7, 1870 Frederiksberg C, Denmark Correspondence should be addressed to Fernando Gomez;´ [email protected] Received 11 July 2015; Accepted 27 August 2015 Academic Editor: Gerardo R. Vasta Copyright © 2015 F. Gomez´ and A. Skovgaard. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Dinoflagellate infections have been reported for different protistan and animal hosts. We report, for the first time, the association between a dinoflagellate parasite and a rotifer host, tentatively Synchaeta sp. (Rotifera), collected from the port of Valencia, NW Mediterranean Sea. The rotifer contained a sporangium with 100–200 thecate dinospores that develop synchronically through palintomic sporogenesis. This undescribed dinoflagellate forms a new and divergent fast-evolved lineage that branches amongthe dinokaryotic dinoflagellates. 1. Introduction form independent lineages with no evident relation to other dinoflagellates [12]. In this study, we describe a new lineage of The alveolates (or Alveolata) are a major lineage of protists an undescribed parasitic dinoflagellate that largely diverged divided into three main phyla: ciliates, apicomplexans, and from other known dinoflagellates.
    [Show full text]
  • Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
    Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry.
    [Show full text]
  • Plant Life Magill’S Encyclopedia of Science
    MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D.
    [Show full text]
  • Understanding Bioluminescence in Dinoflagellates—How Far Have We Come?
    Microorganisms 2013, 1, 3-25; doi:10.3390/microorganisms1010003 OPEN ACCESS microorganisms ISSN 2076-2607 www.mdpi.com/journal/microorganisms Review Understanding Bioluminescence in Dinoflagellates—How Far Have We Come? Martha Valiadi 1,* and Debora Iglesias-Rodriguez 2 1 Department of Evolutionary Ecology, Max Planck Institute for Evolutionary Biology, August-Thienemann-Strasse, Plӧn 24306, Germany 2 Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, CA 93106, USA; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected] or [email protected]; Tel.: +49-4522-763277; Fax: +49-4522-763310. Received: 3 May 2013; in revised form: 20 August 2013 / Accepted: 24 August 2013 / Published: 5 September 2013 Abstract: Some dinoflagellates possess the remarkable genetic, biochemical, and cellular machinery to produce bioluminescence. Bioluminescent species appear to be ubiquitous in surface waters globally and include numerous cosmopolitan and harmful taxa. Nevertheless, bioluminescence remains an enigmatic topic in biology, particularly with regard to the organisms’ lifestyle. In this paper, we review the literature on the cellular mechanisms, molecular evolution, diversity, and ecology of bioluminescence in dinoflagellates, highlighting significant discoveries of the last quarter of a century. We identify significant gaps in our knowledge and conflicting information and propose some important research questions
    [Show full text]