Migratory Birds As Disseminators of Ticks and the Tick-Borne Pathogens Borrelia Bacteria and Tick-Borne Encephalitis
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Disaggregation of Bird Families Listed on Cms Appendix Ii
Convention on the Conservation of Migratory Species of Wild Animals 2nd Meeting of the Sessional Committee of the CMS Scientific Council (ScC-SC2) Bonn, Germany, 10 – 14 July 2017 UNEP/CMS/ScC-SC2/Inf.3 DISAGGREGATION OF BIRD FAMILIES LISTED ON CMS APPENDIX II (Prepared by the Appointed Councillors for Birds) Summary: The first meeting of the Sessional Committee of the Scientific Council identified the adoption of a new standard reference for avian taxonomy as an opportunity to disaggregate the higher-level taxa listed on Appendix II and to identify those that are considered to be migratory species and that have an unfavourable conservation status. The current paper presents an initial analysis of the higher-level disaggregation using the Handbook of the Birds of the World/BirdLife International Illustrated Checklist of the Birds of the World Volumes 1 and 2 taxonomy, and identifies the challenges in completing the analysis to identify all of the migratory species and the corresponding Range States. The document has been prepared by the COP Appointed Scientific Councilors for Birds. This is a supplementary paper to COP document UNEP/CMS/COP12/Doc.25.3 on Taxonomy and Nomenclature UNEP/CMS/ScC-Sc2/Inf.3 DISAGGREGATION OF BIRD FAMILIES LISTED ON CMS APPENDIX II 1. Through Resolution 11.19, the Conference of Parties adopted as the standard reference for bird taxonomy and nomenclature for Non-Passerine species the Handbook of the Birds of the World/BirdLife International Illustrated Checklist of the Birds of the World, Volume 1: Non-Passerines, by Josep del Hoyo and Nigel J. Collar (2014); 2. -
Vulture Msap)
MULTI-SPECIES ACTION PLAN TO CONSERVE AFRICAN-EURASIAN VULTURES (VULTURE MSAP) CMS Raptors MOU Technical Publication No. 5 CMS Technical Series No. xx MULTI-SPECIES ACTION PLAN TO CONSERVE AFRICAN-EURASIAN VULTURES (VULTURE MSAP) CMS Raptors MOU Technical Publication No. 5 CMS Technical Series No. xx Overall project management Nick P. Williams, CMS Raptors MOU Head of the Coordinating Unit [email protected] Jenny Renell, CMS Raptors MOU Associate Programme Officer [email protected] Compiled by André Botha, Endangered Wildlife Trust Overarching Coordinator: Multi-species Action Plan to conserve African-Eurasian Vultures [email protected] Jovan Andevski, Vulture Conservation Foundation European Regional Coordinator: Multi-species Action Plan to conserve African-Eurasian Vultures [email protected] Chris Bowden, Royal Society for the Protection of Birds Asian Regional Coordinator: Multi-species Action Plan to conserve African-Eurasian Vultures [email protected] Masumi Gudka, BirdLife International African Regional Coordinator: Multi-species Action Plan to conserve African-Eurasian Vultures [email protected] Roger Safford, BirdLife International Senior Programme Manager: Preventing Extinctions [email protected] Nick P. Williams, CMS Raptors MOU Head of the Coordinating Unit [email protected] Technical support Roger Safford, BirdLife International José Tavares, Vulture Conservation Foundation Regional Workshop Facilitators Africa - Chris Bowden, Royal Society for the Protection of Birds Europe – Boris Barov, BirdLife International Asia and Middle East - José Tavares, Vulture Conservation Foundation Overarching Workshop Chair Fernando Spina, Chair of the CMS Scientific Council Design and layout Tris Allinson, BirdLife International 2 Multi-species Action Plan to Conserve African-Eurasian Vultures (Vulture MsAP) Contributors Lists of participants at the five workshops and of other contributors can be found in Annex 1. -
Birds of Coimbatore Urban Area, India
REGIONAL OFFICE FOR ASIA AND THE PACIFIC (RAP), BANGKOK FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS October-December 2005 Regional Quarterly Bulletin on Wildlife and National Parks Management Vol. XXXII : No. 4 Featuring Vol. XIX : No. 4 Contents Birds of Coimbatore Urban Area, India.........…………... 1 Study on Medicinal and Aromatic Plants Biodiversity of Himachal Pradesh Himalayas......................…....… 6 Participatory Wildlife Conservation Initiatives in Nepal.… 11 Diversity of Spiders in Parambikulam Wildlife Sanctuary.. 18 Ecology of Purple Moorhen in Azhinhillam Wetlan…....… 23 Breeding of an Indian Giant Squirrel Pup at Arignar Anna Zoological Park......................................................…. 27 Food, Feeding, Behavior and Habitat Preferences of REGIONAL OFFICE Spiny-Tailed Lizard in the Thar Desert...................…... 30 FOR ASIA AND THE PACIFIC TIGERPAPER is a quarterly news bulletin dedicated to the exchange of information Second Announcement - Asia-Pacific Forestry Commission relating to wildlife and national parks management for the to meet in Dehradun, India....................................……… 1 Asia-Pacific Region. New Forest Assessment Indicates Overall Expansion of Asian Forests But Continued Decline of Natural Forests...................................................................….... 4 ISSN 1014 - 2789 Interested in Making Forest Management Work for the Poor?............................................................................ 6 Address Award-Winning Forestry at Tonle Sap -- -
Genomics and Population History of Black-Headed Bulbul (Brachypodius Atriceps) Color Morphs
Louisiana State University LSU Digital Commons LSU Doctoral Dissertations Graduate School March 2020 Genomics and Population History of Black-headed Bulbul (Brachypodius atriceps) Color Morphs Subir B. Shakya Louisiana State University and Agricultural and Mechanical College Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_dissertations Part of the Biology Commons Recommended Citation Shakya, Subir B., "Genomics and Population History of Black-headed Bulbul (Brachypodius atriceps) Color Morphs" (2020). LSU Doctoral Dissertations. 5187. https://digitalcommons.lsu.edu/gradschool_dissertations/5187 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Doctoral Dissertations by an authorized graduate school editor of LSU Digital Commons. For more information, please [email protected]. GENOMICS AND POPULATION HISTORY OF BLACK- HEADED BULBUL (BRACHYPODIUS ATRICEPS) COLOR MORPHS A Dissertation Submitted to the Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College in partial fulfillment of the requirements for the degree of Doctor of Philosophy in The Department of Biological Sciences by Subir B. Shakya B.Sc., Southern Arkansas University, 2014 May 2020 ACKNOWLEDGMENTS A dissertation represents not only the effort of a single candidate but a document highlighting the roles and endeavors of many people and institutions. To this end, I have a lot of people and institutions to thank, without whom this dissertation would never have been completed. First and foremost, I would like to thank my advisor, Dr. Frederick H. Sheldon, who has guided me through the six years of my Ph.D. studies. -
Host Dispersal Shapes the Population Structure of a Tick-Borne Bacterial
Host dispersal shapes the population structure of a tick-borne bacterial pathogen Ana Cláudia Norte, Gabriele Margos, Noémie Becker, Jaime Albino Ramos, Maria Sofia Núncio, Volker Fingerle, Pedro Miguel Araújo, Peter Adamík, Haralambos Alivizatos, Emilio Barba, et al. To cite this version: Ana Cláudia Norte, Gabriele Margos, Noémie Becker, Jaime Albino Ramos, Maria Sofia Núncio, et al.. Host dispersal shapes the population structure of a tick-borne bacterial pathogen. Molecular Ecology, Wiley, 2020, 29 (3), pp.485-501. 10.1111/mec.15336. hal-02990550 HAL Id: hal-02990550 https://hal-cnrs.archives-ouvertes.fr/hal-02990550 Submitted on 19 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Molecular Ecology Host dispersal shapes the population structure of a tick- borne bacterial pathogen Journal: Molecular Ecology Manuscript ID MEC-18-1428.R1 Manuscript Type: Original Article Date Submitted byFor the Review Only n/a Author: Complete List of Authors: Norte, Ana; University of Coimbra, MARE - Marine and Environmental Sciences Centre, Department of Life Sciences Margos, Gabriele; Bavarian Health and Food Safety Authority, German National Reference Centre for Borrelia Becker, Noemie; LMU Munich, Division of Evolutionary Biology, Faculty of Biology Ramos, Jaime; University of Coimbra, MARE - Marine and Environmental Sciences Centre, Department of Life Sciences Nuncio, Maria ; National Institute of Health Dr. -
Evolutionary Ecology of Lyme Borrelia T ⁎ Kayleigh R
Infection, Genetics and Evolution 85 (2020) 104570 Contents lists available at ScienceDirect Infection, Genetics and Evolution journal homepage: www.elsevier.com/locate/meegid Review Evolutionary ecology of Lyme Borrelia T ⁎ Kayleigh R. O'Keeffe , Zachary J. Oppler, Dustin Brisson Department of Biology, University of Pennsylvania, Philadelphia, PA, USA ARTICLE INFO ABSTRACT Keywords: The bacterial genus, Borrelia, is comprised of vector-borne spirochete species that infect and are transmitted from Evolutionary ecology multiple host species. Some Borrelia species cause highly-prevalent diseases in humans and domestic animals. Borrelia Evolutionary, ecological, and molecular research on many Borrelia species have resulted in tremendous progress Transmission toward understanding the biology and natural history of these species. Yet, many outstanding questions, such as Ecological interactions how Borrelia populations will be impacted by climate and land-use change, will require an interdisciplinary approach. The evolutionary ecology research framework incorporates theory and data from evolutionary, eco- logical, and molecular studies while overcoming common assumptions within each field that can hinder in- tegration across these disciplines. Evolutionary ecology offers a framework to evaluate the ecological con- sequences of evolved traits and to predict how present-day ecological processes may result in further evolutionary change. Studies of microbes with complex transmission cycles, like Borrelia, which interact with multiple vertebrate hosts and arthropod vectors, are poised to leverage the power of the evolutionary ecology framework to identify the molecular interactions involved in ecological processes that result in evolutionary change. Using existing data, we outline how evolutionary ecology theory can delineate how interactions with other species and the physical environment create selective forces or impact migration of Borrelia populations and result in micro-evolutionary changes. -
Multipartite Genome of Lyme Disease Borrelia: Structure, Variation and Prophages
Curr. Issues Mol. Biol. 42: 409-454. caister.com/cimb Multipartite Genome of Lyme Disease Borrelia: Structure, Variation and Prophages Ira Schwartz1*, Gabriele Margos2, Sherwood R. Casjens3, Wei-Gang Qiu4 and Christian H. Eggers5 1Department of Microbiology and Immunology, New York Medical College, Valhalla, NY USA, 2National Reference Centre for Borrelia and Bavarian Health and Food Safety Authority, Oberschleissheim, Germany, 3Division of Microbiology and Immunology, Pathology Department, University of Utah School of Medicine, Salt Lake City, UT USA, 4Department of Biological Sciences, Hunter College of the City University of New York, New York, NY USA 5Department of Biomedical Sciences, Quinnipiac University, Hamden, CT, USA *Corresponding author: [email protected] DOI: https://doi.org/10.21775/cimb.042.409 Abstract pathogenicity have been deduced, and comparative All members of the Borrelia genus that have been whole genome analyses promise future progress in examined harbour a linear chromosome that is about this arena. 900 kbp in length, as well as a plethora of both linear and circular plasmids in the 5-220 kbp size range. Introduction Genome sequences for 27 Lyme disease Borrelia The genus Borrelia forms a deeply separated lineage isolates have been determined since the elucidation within the Spirochaetes branch of the bacterial tree of of the B. burgdorferi B31 genome sequence in 1997. life (Paster et al., 1991). The organisms are The chromosomes, which carry the vast majority of genomically unique and not closely related to any the housekeeping genes, appear to be very constant other bacteria, including the other Spirochaetes. in gene content and organization across all Lyme Borrelia burgdorferi and Borrelia hermsii are disease Borrelia species. -
Sulawesi & Moluccas Extension: August-September 2015
Tropical Birding Trip Report Sulawesi & Moluccas Extension: August-September 2015 A Tropical Birding set departure tour Sulawesi (Indonesia): & The Moluccas Extension (Halmahera) Birding the Edge of “Wallace’s Line” Minahassa Masked-Owl Tangkoko This tour was incredible for nightbirds; 9 owls, 5 nightjars, and 1 owlet-nightjar all seen. This bird was entirely unexpected; rarely seen at night; we were very fortunate to see in the daytime. Voted as one of the top five birds of the tour. 15th August – 4th September 2015 Tour Leaders: Sam Woods & Theo Henoch “At the same time, the character of its natural history proves it to be a rather ancient land, since it possesses a number of animals peculiar to itself or common to small islands around it, but almost always distinct from those of New Guinea on the east, of Ceram (now Seram) on the south, and of Celebes (now Sulawesi) and the Sula islands on the west.” 1 www.tropicalbirding.com +1-409-515-0514 [email protected] Page Tropical Birding Trip Report Sulawesi & Moluccas Extension: August-September 2015 British naturalist Alfred Russel Wallace, writing on Golilo (now called Halmahera), in the “Malay Archipelago: The Land of the Orang-Utan, and the Bird of Paradise. A Narrative of Travel, with studies of Man and Nature.” in 1869 Acclaimed British naturalist (and co-conspirator with Charles Darwin on the development of the theory of evolution of species by natural selection), Alfred Russel Wallace spoke of the “peculiar”, and it was indeed the peculiar, or ENDEMIC, which was the undoubted focus of this tour. -
A Review of the Recent Advances in the Systematics of the Avian Superfamily Sylvioidea
Chinese Birds 2013, 4(2):99–131 REVIEW DOI 10.5122/cbirds.2013.0016 A review of the recent advances in the systematics of the avian superfamily Sylvioidea Per ALSTRÖM 1,2,, Urban OLSSON 3, Fumin LEI 1 1 Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China 2 Swedish Species Information Centre, Swedish University of Agricultural Sciences, Box 7007, SE-750 07 Uppsala, Sweden 3 Systematics and Biodiversity, Department of Biology and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30 Göteborg, Sweden Abstract The systematics of the avian superfamily Sylvioidea are reviewed, focusing on studies of relationships among families and within genera, more superficially on taxonomic studies at the species level. For the families Bernieridae and Phylloscopidae, new analyses based on already published sequence data are presented. Our understanding of relationships has been vastly improved in recent years due to a large number of molecular studies. However, the relationships among the different families remain largely obscured, probably mainly as a result of rapid divergence of the different primary lineages (families). Also, species level taxonomy has been much improved in recent years due to a large number of studies applying molecular markers and/or vocalizations and other life-history data. It seems likely that the number of species will continue to increase, as new groups are being studied with modern integrative methods. Keywords phylogenetic relationships, superfamily Sylvioidea, taxonomy Introduction tanagers, wood-warblers, and icterids). Subsequent studies of DNA sequence data have indicated that both The Passerida was identified by Sibley and Ahlquist Muscicapoidea and Passeroidea, after minor taxonomic (1990) based on DNA-DNA hybridization studies as adjustments, can be recovered as monophyletic (Barker the largest radiation within oscine passerine birds (cf. -
Sulawesi and Halmahera Trip Report
SULAWESI AND HALMAHERA TRIP REPORT SEPTEMBER 2020 By Andy Walker We had incredible views of the stunning Ivory-breasted Pitta during the trip. www.birdingecotours.com [email protected] 2 | TRIP REPORT Sulawesi and Halmahera: September 2020 Overview The island of Sulawesi (formerly Celebes) offers some of the best birding in Indonesia, and that’s saying something for a country made up of over 17,500 islands sprawling across 3,181 miles (5,120 kilometers) from east to west, and 1,094 miles (1,760 kilometers) from north to south, including the ‘famous’ islands of New Guinea (Papua and West Papua), Borneo (Kalimantan), Halmahera, Java, Bali, and Sumatra to name a few, and which has a bird list of nearly 1,800 species! The Sulawesi Archipelago, which includes several near-shore islands such as the Banggai islands – where I visited in February 2020 (read all about the birding and several species new to science on these islands in this blog post), has a bird list of 534 species following International Ornithological Congress (IOC) taxonomy in October 2020 and an amazing 98 endemics, including one endemic monotypic family, the highly sought-after Hylocitrea – making it a ‘must-visit’ destination for ‘family listers’. Some of the highly sought-after and intriguing species in Sulawesi include Maleo, Geomalia, Malia, Blue-faced Rail, several endemic kingfisher (such as Green-backed Kingfisher, Lilac Kingfisher, Scaly-breasted Kingfisher, Great-billed Kingfisher, and Sulawesi Dwarf Kingfisher), Purple-bearded Bee-eater, Sulawesi Pitta, Sulawesi Hornbill, Knobbed Hornbill, Lompobattang Flycatcher, Sulawesi Streaked Flycatcher, Sulawesi Goshawk, Ashy Woodpecker, and a range of owls and nightjars such as Satanic Nightjar, Sulawesi Nightjar, Ochre-bellied Boobook, Speckled Boobook, Sulawesi Masked Owl, Minahassa Masked Owl, and Sulawesi Scops Owl. -
Molecular Systematics of the Avian Superfamily Sylvioidea with Special Regard to the Families Acrocephalidae and Locustellidae
Molecular systematics of the avian superfamily Sylvioidea with special regard to the families Acrocephalidae and Locustellidae (Aves: Passeriformes) I n a u g u r a l d i s s e r t a t i o n zur Erlangung des akademischen Grades doctor rerum naturalium (Dr. rer. nat.) an der Mathematisch-Naturwissenschaftlichen Fakultät der Ernst-Moritz-Arndt-Universität Greifswald vorgelegt von Silke Fregin geboren am 22.05.1976 in Werneck Greifswald, Juni 2012 2 Dekan: Prof. Dr. Klaus Fesser 1. Gutachter : Prof. Dr. Gabriele Uhl 2. Gutachter: Prof. Dr. Staffan Bensch Tag der Promotion: 14.11.2012 3 4 Table of contents Table of contents Zusammenfassung..........................................................................................................................................7 Summary...........................................................................................................................................................9 Abbreviations................................................................................................................................................11 1 General Introduction.....................................................................................................................................13 1.1 DNA-DNA hybridisation studies.........................................................................................................13 1.2 Advantages and disadvantages of DNA sequences..........................................................................14 1.3 Analysis of DNA sequences..................................................................................................................15 -
Phylogenetic Relationships Within Passerida (Aves: Passeriformes): a Review and a New Molecular Phylogeny Based on Three Nuclear Intron Markers
Molecular Phylogenetics and Evolution 48 (2008) 858–876 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Phylogenetic relationships within Passerida (Aves: Passeriformes): A review and a new molecular phylogeny based on three nuclear intron markers Ulf S. Johansson a,b,*, Jon Fjeldså c, Rauri C.K. Bowie a,d a DST/NRF Centre of Excellence at the Percy FitzPatrick Institute, University of Cape Town, Rondebosch 7701, Cape Town, South Africa b Swedish Museum of Natural History, Department of Vertebrate Zoology, Box 50007, SE-104 05 Stockholm, Sweden c Zoological Museum, University of Copenhagen, DK-2100 Copenhagen, Denmark d Museum of Vertebrate Zoology and Department of Integrative Biology, 3101 Valley Life Science Building, University of California, Berkeley, CA 94720-3160, USA article info abstract Article history: The avian clade Passerida was first identified based on DNA–DNA hybridization data [C.G. Sibley, J.E. Ahl- Received 12 September 2007 quist, Phylogeny and Classification of Birds, 1990, Yale University Press, New Haven, CT]. Monophyly of Revised 5 May 2008 the Passerida, with the exception of a few taxa, has later been corroborated in several studies; however, Accepted 22 May 2008 the basal phylogenetic relationships have remained poorly understood. In this paper, we review the cur- Available online 10 July 2008 rent knowledge of the phylogenetic relationships within Passerida and present a new phylogeny based on three nuclear introns (myoglobin intron 2, ornithine decarboxylase introns 6 and 7, as well as b-fibrino- Keywords: gen intron 5). Our findings corroborate recent molecular hypotheses, but also identify several hitherto Aves unrecognized relationships.