The Diploid Life Cycle of Allomyces Arbuscula DANIEL J
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The Linear Mitochondrial Genome of the Quarantine Chytrid Synchytrium
van de Vossenberg et al. BMC Evolutionary Biology (2018) 18:136 https://doi.org/10.1186/s12862-018-1246-6 RESEARCH ARTICLE Open Access The linear mitochondrial genome of the quarantine chytrid Synchytrium endobioticum; insights into the evolution and recent history of an obligate biotrophic plant pathogen Bart T. L. H. van de Vossenberg1,2* , Balázs Brankovics3, Hai D. T. Nguyen4, Marga P. E. van Gent-Pelzer1, Donna Smith5, Kasia Dadej4, Jarosław Przetakiewicz6, Jan F. Kreuze7, Margriet Boerma8, Gerard C. M. van Leeuwen2, C. André Lévesque4 and Theo A. J. van der Lee1 Abstract Background: Chytridiomycota species (chytrids) belong to a basal lineage in the fungal kingdom. Inhabiting terrestrial and aquatic environments, most are free-living saprophytes but several species cause important diseases: e.g. Batrachochytrium dendrobatidis, responsible for worldwide amphibian decline; and Synchytrium endobioticum, causing potato wart disease. S. endobioticum has an obligate biotrophic lifestyle and isolates can be further characterized as pathotypes based on their virulence on a differential set of potato cultivars. Quarantine measures have been implemented globally to control the disease and prevent its spread. We used a comparative approach using chytrid mitogenomes to determine taxonomical relationships and to gain insights into the evolution and recent history of introductions of this plant pathogen. (Continued on next page) * Correspondence: [email protected]; [email protected] 1Wageningen UR, Droevendaalsesteeg 1, Biointeractions and Plant Health & Plant Breeding, 6708, PB, Wageningen, The Netherlands 2Dutch National Plant Protection Organization, National Reference Centre, Geertjesweg 15, 6706EA Wageningen, The Netherlands Full list of author information is available at the end of the article © The Author(s). -
The Life Cycles of Cryptogams 7
Acta Botanica Malacitana, 16(1): 5-18 Málaga, 1991 E IE CYCES O CYOGAMS Peter R. BELL SUMMARY: Meiosis and karyogamy are recognized as control points in the life cycle of cryptogams. The control of meiosis is evidently complex and in yeast, and by analogy in all cryptogams, involves progressive gene activation. The causes of the delay in meiosis in diplohaplontic and diplontic organisms, and the manner in which the block is removed remain to be discovered. There is accumulating evidence that cytoplasmic RNA plays an important role in meiotic division. Many features of tn are still obscure. The tendency to oogamy has provided the opportunity for the laying down of long-lived messenger RNA in the abundant cytoplasm of the female gamete. The sporophytic nature of the developing zygote can in this way be partially pre-determined. There is evidence that this is the situation in the ferns. Specific molecules (probably arabino-galacto-proteins) on the surface of the plasma membrane are likely to account both for gametic selection, and the readiness with which appropriate gametes fuse. The dikaryotic condition indicates that nuclear fusion is not inevitable following plasmogamy. The ultimate fusion of the nuclei may result from quite simple changes in the nuclear surface. Exposure of lipid, for example, would lead to fusion as a result of hydrophobic forces. Aberrations of cryptogamic life cycles are numerous. The nuclear relationships of many aberrant cycles are unknown. In general it appears that the maintenance of sporophytic growth depends upon the presence of at least two sets of chromosomes. Conversely the maintenance of gametophytic growth in cultures obtained aposporously appears to be impossible in the presence of four sets of chromosomes, or more. -
S41467-021-25308-W.Pdf
ARTICLE https://doi.org/10.1038/s41467-021-25308-w OPEN Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota ✉ ✉ Luis Javier Galindo 1 , Purificación López-García 1, Guifré Torruella1, Sergey Karpov2,3 & David Moreira 1 Compared to multicellular fungi and unicellular yeasts, unicellular fungi with free-living fla- gellated stages (zoospores) remain poorly known and their phylogenetic position is often 1234567890():,; unresolved. Recently, rRNA gene phylogenetic analyses of two atypical parasitic fungi with amoeboid zoospores and long kinetosomes, the sanchytrids Amoeboradix gromovi and San- chytrium tribonematis, showed that they formed a monophyletic group without close affinity with known fungal clades. Here, we sequence single-cell genomes for both species to assess their phylogenetic position and evolution. Phylogenomic analyses using different protein datasets and a comprehensive taxon sampling result in an almost fully-resolved fungal tree, with Chytridiomycota as sister to all other fungi, and sanchytrids forming a well-supported, fast-evolving clade sister to Blastocladiomycota. Comparative genomic analyses across fungi and their allies (Holomycota) reveal an atypically reduced metabolic repertoire for sanchy- trids. We infer three main independent flagellum losses from the distribution of over 60 flagellum-specific proteins across Holomycota. Based on sanchytrids’ phylogenetic position and unique traits, we propose the designation of a novel phylum, Sanchytriomycota. In addition, our results indicate that most of the hyphal morphogenesis gene repertoire of multicellular fungi had already evolved in early holomycotan lineages. 1 Ecologie Systématique Evolution, CNRS, Université Paris-Saclay, AgroParisTech, Orsay, France. 2 Zoological Institute, Russian Academy of Sciences, St. ✉ Petersburg, Russia. 3 St. -
Redalyc.Primer Registro De Allomyces Neomoniliformis (Chytridiomycota) Y
Darwiniana ISSN: 0011-6793 [email protected] Instituto de Botánica Darwinion Argentina Steciow, Mónica M.; Eliades, Lorena A. Primer registro de Allomyces neomoniliformis (Chytridiomycota) y Dictyuchus missouriensis (Oomycota) aislados de un suelo agrícola (Buenos Aires, Argentina) Darwiniana, vol. 39, núm. 1-2, 2001, pp. 15-18 Instituto de Botánica Darwinion Buenos Aires, Argentina Disponible en: http://www.redalyc.org/articulo.oa?id=66939203 Cómo citar el artículo Número completo Sistema de Información Científica Más información del artículo Red de Revistas Científicas de América Latina, el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto NOTAM. M.TAXONÓMICA STECIOW & L. A. ELIADES. Primer registroDARWINIANA de Allomyces neomoniliformis y DictyuchusISSN missouriensis 0011-6793 39(1-2): 15-18. 2001 PRIMER REGISTRO DE ALLOMYCES NEOMONILIFORMIS (CHYTRIDIOMYCOTA) Y DICTYUCHUS MISSOURIENSIS (OOMYCOTA) AISLADOS DE UN SUELO AGRICOLA (BUENOS AIRES, ARGENTINA) MÓNICA M. STECIOW 1 & LORENA A. ELIADES 2 Instituto de Botánica Spegazzini, Calle 53 N° 477, B1900AVJ La Plata, Buenos Aires, Argentina. E-mail: [email protected] ABSTRACT: Steciow, M. M. & Eliades, L. A. 2001. First record of Allomyces neomoniliformis (Chytridiomycota) and Dictyuchus missouriensis (Oomycota) from an agricultural soil in Argentina. Darwiniana 39(1-2): 15-18. Allomyces neomoniliformis and Dictyuchus missouriensis were isolated from agricultural soil with organic matter (leaves, roots and twigs) in Argentina. Both are reported for the first time from Argentina and for the second time for South America; this is the southernmost record of these species in the Western Hemisphere. These are the second isolations made of a member of the genus Allomyces and Dictyuchus in Argentina. -
Morphology, Ultrastructure, and Molecular Phylogeny of Rozella Multimorpha, a New Species in Cryptomycota
DR. PETER LETCHER (Orcid ID : 0000-0003-4455-9992) Article type : Original Article Letcher et al.---A New Rozella From Pythium Morphology, Ultrastructure, and Molecular Phylogeny of Rozella multimorpha, a New Species in Cryptomycota Peter M. Letchera, Joyce E. Longcoreb, Timothy Y. Jamesc, Domingos S. Leited, D. Rabern Simmonsc, Martha J. Powella a Department of Biological Sciences, The University of Alabama, Tuscaloosa, 35487, Alabama, USA b School of Biology and Ecology, University of Maine, Orono, 04469, Maine, USA c Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, 48109, Michigan, USA d Departamento de Genética, Evolução e Bioagentes, Universidade Estadual de Campinas, Campinas, SP, 13082-862, Brazil Corresponding author: P. M. Letcher, Department of Biological Sciences, The University of Alabama, 1332 SEC, Box 870344, 300 Hackberry Lane, Tuscaloosa, Alabama 35487, USA, telephone number:Author Manuscript +1 205-348-8208; FAX number: +1 205-348-1786; e-mail: [email protected] This is the author manuscript accepted for publication and has undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: 10.1111/jeu.12452-4996 This article is protected by copyright. All rights reserved ABSTRACT Increasing numbers of sequences of basal fungi from environmental DNA studies are being deposited in public databases. Many of these sequences remain unclassified below the phylum level because sequence information from identified species is sparse. Lack of basic biological knowledge due to a dearth of identified species is extreme in Cryptomycota, a new phylum widespread in the environment and phylogenetically basal within the fungal lineage. -
June-1982-Inoculum.Pdf
SUSTAI W IWG MEMBERS ABBOTT LABORATORIES ELI LILLY AND COMPANY ANALYTAB PRODUCTS MERCK SHARP AND DOHME RESEARCH LABORATORIES AYERST RESEMCH LABORATORIES MILES LABORATORIES INC. BBL MICROBIOLOGY SYSTEMS NALGE COMPANY / SY BRON CORPORATION BELCO GLASS INC. NEW BRUNSWICK SCIENTIFIC CO. BURROUGHS WELCOME COMPANY PELCO BUTLER COUNTY WJSHROOM FMI PFIZER, INC. CAROLINA BIOLOGICAL SUPPLY COMPANY PIONEER HI-BRED INTERNATIONAL, INC. DEKALB AGRESEARCH , INC . THE QUAKER OATS COMPANY DIFCO LABORATORY PRODUCTS ROHM AND HASS COMPANY FORRESTRY SUPPLIERS INCORPORATED SCHERING CORPORATION FUNK SEEDS INTERNATIONAL SEARLE RESEARCH AND DEVELOPMENT HOECHST-ROUSSEL PHARMACEUTICALS INC. SMITH KLINE & FRENCH LABORATORIES HOFFMANN-LA ROCHE, INC. SPRINGER VERLAG NEW YORK, INC. JANSSEN PHARMACEUTICA INCORPORATED TRIARCH INCORPORATED LANE SCIENCE EqUIPMENT CO. THE WJOHN COMPANY WYETH LABORATORIES The Society is extremely grateful for the support of its Sustaining Members. These organizations are listed above in alphabetical order. Patronize them and let their repre- sentatives know of our appreciation whenever possible. OFFICERS OF THE MYCOLOGICAL SOCIETY OF AMERICA Margaret Barr Bigelow, President Donald J. S. Barr, Councilor (1981-34) Harry D. Thiers, President-elect Meredith Blackwell, Councilor (1981-82) Richard T. Hanlin, Vice-president O'Neil R. Collins, Councilor (1980-83) Roger Goos, Sec.-Treas. Ian K. Ross, Councilor (1980-83) Joseph F. Amrnirati, Councilor (1981-83) Walter J. Sundberg, Councilor (1980-83) Donald T. Wicklow, Councilor (1930-83) MYCOLOGICAL SOCIETY OF AMERICA NEWSLETTER Volume 33, No. 1, June 1982 Edited by Donald H. Pfister and Geraldine C. Kaye TABLE OF CONTENTS General Announcements .........2 Positions Wanted ............14 Calendar of Meetings and Forays ....4 Changes in Affiliation .........15 New Research. .............6 Travels, Visits. -
Multimodal Sensorimotor System in Unicellular Zoospores of a Fungus Andrew J
© 2018. Published by The Company of Biologists Ltd | Journal of Experimental Biology (2018) 221, jeb163196. doi:10.1242/jeb.163196 RESEARCH ARTICLE Multimodal sensorimotor system in unicellular zoospores of a fungus Andrew J. M. Swafford and Todd H. Oakley* ABSTRACT found in freshwater ecosystems with a global distribution (James Complex sensory systems often underlie critical behaviors, including et al., 2014). Zoosporic fungi are typically characterized as saprobes, avoiding predators and locating prey, mates and shelter. Multisensory such as Allomyces, although parasitic life strategies on both plant and systems that control motor behavior even appear in unicellular animal hosts also do exist (Longcore et al., 1999). Similar to all fungi, eukaryotes, such as Chlamydomonas, which are important laboratory colonies of Allomyces use mycelia to absorb nutrients and ultimately models for sensory biology. However, we know of no unicellular grow reproductive structures. Unlike most fungi, Allomyces produce opisthokonts that control motor behavior using a multimodal sensory zoosporangia, terminations of mycelial branches that make, store and system. Therefore, existing single-celled models for multimodal ultimately release a multitude of single-celled, flagellated propagules, sensorimotor integration are very distantly related to animals. Here, termed zoospores (Olson, 1984). When the appropriate we describe a multisensory system that controls the motor function of environmental cues are present, zoospores are produced en masse, unicellular fungal zoospores. We found that zoospores of Allomyces eventually bursting from zoosporangia (James et al., 2014). Once in arbusculus exhibit both phototaxis and chemotaxis. Furthermore, the water column, the zoospores rely on a single, posterior flagellum we report that closely related Allomyces species respond to either to propel themselves away from the parent colony and towards the chemical or the light stimuli presented in this study, not both, and suitable substrates or hosts (Olson, 1984). -
Comparative Genomics of Chytrid Fungi Reveal Insights Into the Obligate
www.nature.com/scientificreports OPEN Comparative genomics of chytrid fungi reveal insights into the obligate biotrophic and Received: 4 February 2019 Accepted: 31 May 2019 pathogenic lifestyle of Synchytrium Published: xx xx xxxx endobioticum Bart T. L. H. van de Vossenberg1,2, Sven Warris 1, Hai D. T. Nguyen3, Marga P. E. van Gent-Pelzer1, David L. Joly 4, Henri C. van de Geest1, Peter J. M. Bonants1, Donna S. Smith5, C. André Lévesque 3 & Theo A. J. van der Lee1 Synchytrium endobioticum is an obligate biotrophic soilborne Chytridiomycota (chytrid) species that causes potato wart disease, and represents the most basal lineage among the fungal plant pathogens. We have chosen a functional genomics approach exploiting knowledge acquired from other fungal taxa and compared this to several saprobic and pathogenic chytrid species. Observations linked to obligate biotrophy, genome plasticity and pathogenicity are reported. Essential purine pathway genes were found uniquely absent in S. endobioticum, suggesting that it relies on scavenging guanine from its host for survival. The small gene-dense and intron-rich chytrid genomes were not protected for genome duplications by repeat-induced point mutation. Both pathogenic chytrids Batrachochytrium dendrobatidis and S. endobioticum contained the largest amounts of repeats, and we identifed S. endobioticum specifc candidate efectors that are associated with repeat-rich regions. These candidate efectors share a highly conserved motif, and show isolate specifc duplications. A reduced set of cell wall degrading enzymes, and LysM protein expansions were found in S. endobioticum, which may prevent triggering plant defense responses. Our study underlines the high diversity in chytrids compared to the well-studied Ascomycota and Basidiomycota, refects characteristic biological diferences between the phyla, and shows commonalities in genomic features among pathogenic fungi. -
Classification of Plant Diseases
K. K. WAGH COLLEGE OF AGRICULTURE, NASHIK DEPARTMENT OF PLANT PATHOLOGY THEORY NOTES Course No.: - PATH -121 Course Title: - Fundamentals of Plant Pathology Credits: - 3 (2+1) Compiled By Prof. Patil K.P. Assistant Professor Department of Plant Pathology Teaching Schedule a) Theory Lecture Topic Weightage (%) 1 Importance of plant diseases, scope and objectives of Plant 3 Pathology..... 2 History of Plant Pathology with special reference to Indian work 3 3,4 Terms and concepts in Plant Pathology, Pathogenesis 6 5 classification of plant diseases 5 6,7, 8 Causes of Plant Disease Biotic (fungi, bacteria, fastidious 10 vesicular bacteria, Phytoplasmas, spiroplasmas, viruses, viroids, algae, protozoa, and nematodes ) and abiotic causes with examples of diseases caused by them 9 Study of phanerogamic plant parasites. 3 10, 11 Symptoms of plant diseases 6 12,13, Fungi: general characters, definition of fungus, somatic structures, 7 14 types of fungal thalli, fungal tissues, modifications of thallus, 15 Reproduction in fungi (asexual and sexual). 4 16, 17 Nomenclature, Binomial system of nomenclature, rules of 6 nomenclature, 18, 19 Classification of fungi. Key to divisions, sub-divisions, orders and 6 classes. 20, 21, Bacteria and mollicutes: general morphological characters. Basic 8 22 methods of classification and reproduction in bacteria 23,24, Viruses: nature, architecture, multiplication and transmission 7 25 26, 27 Nematodes: General morphology and reproduction, classification 6 of nematode Symptoms and nature of damage caused by plant nematodes (Heterodera, Meloidogyne, Anguina etc.) 28, 29, Principles and methods of plant disease management. 6 30 31, 32, Nature, chemical combination, classification of fungicides and 7 33 antibiotics. -
Blastocladiomycota) and Rozella Allomycis (Cryptomycota)
fungal biology 121 (2017) 561e572 journal homepage: www.elsevier.com/locate/funbio Ultrastructural characterization of the hosteparasite interface between Allomyces anomalus (Blastocladiomycota) and Rozella allomycis (Cryptomycota) Martha J. POWELLa, Peter M. LETCHERa,*, Timothy Y. JAMESb aDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL 35487, USA bDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA article info abstract Article history: Rozella allomycis is an obligate endoparasite of the water mold Allomyces and a member of Received 16 December 2016 a clade (¼ Opisthosporidia) sister to the traditional Fungi. Gaining insights into Rozella’s de- Received in revised form velopment as a phylogenetically pivotal endoparasite can aid our understanding of struc- 8 March 2017 tural adaptations and evolution of the Opisthosporidia clade, especially within the context Accepted 13 March 2017 of genomic information. The purpose of this study is to characterize the interface between Available online 21 March 2017 R. allomycis and Allomyces anomalus. Electron microscopy of developing plasmodia of R. al- Corresponding Editor: lomycis in host hyphae shows that the interface consists of three-membrane layers, inter- Gordon William Beakes preted as the parasite’s plasma membrane (inner one layer) and a host cisterna (outer two layers). As sporangial and resting spore plasmodia develop, host mitochondria typically Keywords: cluster at the surface of the parasite and eventually align parallel to the three-membrane Evolution layered interface. The parasite’s mitochondria have only a few cristae and the mitochon- Interface drial matrix is sparse, clearly distinguishing parasite mitochondria from those of the Mitochondrial recruitment host. Consistent with the expected organellar topology if the parasite plasmodia phagocy- Parasitism tize host cytoplasm, phagocytic vacuoles are at first bounded by three-membrane layers Phagocytosis with host-type mitochondria lining the inner membrane. -
Multimodal Sensorimotor System in Unicellular Zoospores of a Fungus
bioRxiv preprint doi: https://doi.org/10.1101/165027; this version posted July 18, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 Multimodal Sensorimotor System in Unicellular Zoospores of a Fungus 2 3 Andrew J.M. Swafford1 and Todd H. Oakley1 4 5 1University of California Santa Barbara. Santa Barbara, California, 93106, USA. 6 7 Running Title: Multisensory System in Fungus Zoospores 8 9 Corresponding author: Todd Oakley - [email protected] 10 11 Keywords: multisensory, zoospore, phototaxis, chemotaxis, allomyces, fungus 12 bioRxiv preprint doi: https://doi.org/10.1101/165027; this version posted July 18, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 13 Summary Statement: Zoospores’ ability to detect light or chemical gradients varies within 14 Allomyces. Here, we report a multimodal sensory system controlling behavior in a fungus, and 15 previously unknown variation in zoospore sensory suites. 16 17 Abstract 18 Complex sensory suites often underlie critical behaviors, including avoiding predators or 19 locating prey, mates, and shelter. Multisensory systems that control motor behavior even appear 20 in unicellular eukaryotes, such as Chlamydomonas, which are important laboratory models for 21 sensory biology. However, we know of no unicellular opisthokont models that control motor 22 behavior using a multimodal sensory suite. -
June 2003 Newsletter of the Mycological Society of America
Supplement to Mycologia Vol. 54(3) June 2003 Newsletter of the Mycological Society of America -- In This Issue -- Fungal Bioterrorism Threat Gaining Public Interest, Yet Not Biggest Concern of Fungal Fungal Bioterrorism ................................ 1-2 Specialists, Survey Finds Find of Century: Additional Comments ...... 2 MSA Official Business by Meredith Stone and John Scally From the President .................................. 3 Questions or comments should be sent to John Scally, Senior Account Executive, From the Editor ....................................... 3 G.S. Schwartz & Co. Inc., 470 Park Ave South, 10th Fl. S., New York, NY Mid-Year Executive Council Minutes .. 4-7 10016, 212.725.4500 x 338 or < [email protected] >. Managing Editor’s Mid-Year Report ....... 8 EADING FUNGAL INFECTION EXPERTS to discuss disease challenges Council Email Express ............................. 9 at upcoming mycology medical conference. The threat of fungal Important Announcement .................... 9 Lagents being misused for bioterrorism will gain the most public MSA ABSTRACTS.................. 10-52, 63 attention over the next year, compared with other fungal disease issues, Forms according to one-quarter of fungal (medical mycology) specialists Change of Address ............................... 7 surveyed in an exclusive report. Surprisingly, however, none of those surveyed consider such a bioterrorist threat to be the most significant Endowment & Contributions ............. 64 challenge facing the area of fungal disease. Gift Membership