Dairy Microbiology: a Practical Approach
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Produktkatalog 2015/2016
Produktkatalog 2015/2016 BD Life Sciences Diagnostic Systems Deutschland . Österreich . Schweiz BD stellt sich vor BD Lifeweltweit Sciences – BD – LifeBD MedicalSciences – BD Medical BD – weltweit BD Life Sciences – Biosciences BD Life Sciences – Diagnostic Systems BD, eines der führenden Medizintech- Biosciences bedient den gesamten Diagnostic Systems ist Ihr Experte und nologie-Unternehmen, hat es sich zur Bereich der biologischen und medizi- erfahrener Partner für die klinische Aufgabe gemacht, in Zusammenar- nischen Forschung und bietet die und industrielle mikrobiologische Diag- beit mit seinen Kunden und Partnern größte Auswahl an innovativen Gerä- nostik. den gegenwärtigen und zukünftigen ten und Reagenzien für die zelluläre Umfassende Konzepte und daran ge- Herausforderungen bei der Gesund- Analyse an. knüpfte Diagnostika, Softwarelösun- heitsversorgung von Menschen auf Ein breites Spektrum an Analyzern gen und Dienstleistungen führen zu der ganzen Welt zu begegnen. und Sortern für die Durchflusszyto- gesteigerter Effizienz im Labor und Mit innovativen Lösungen optimiert metrie, verbunden mit kompetenter zu schnelleren verwertbaren Ergeb- BD die Arzneimittelverabreichung, Beratung und Service, ermöglichen nissen. verbessert die Diagnose von Infek- die passgenaue Lösung für Ihr Labor. Unser klinischer Fokus liegt in der Prä- tionskrankheiten und Krebs, unter- Unser Produktangebot und unsere vention und Diagnose von Infektions- stützt die Behandlung von Diabetes Kompetenz machen uns zum interes- krankheiten sowie des Zervixkarzinoms. und bringt die Zellforschung voran. santen Partner für Forschungs- und Für den klinischen Bereich bietet Diag- Rund 30.000 BD-Mitarbeiterinnen Routinelabors, für die Industrie sowie nostic Sytems integrierte Lösungen und Mitarbeiter in 50 Ländern setzen für die wachsende Zahl von bio- und auf den Gebieten Tuberkulose, Sep- sich dafür ein, unser Unternehmens- gentechnologischen Einrichtungen. -
1 Aix-Marseille Universite Faculte De Médecine De
AIX-MARSEILLE UNIVERSITE FACULTE DE MÉDECINE DE MARSEILLE ECOLE DOCTORALE DES SCIENCES DE LA VIE ET DE LA SANTE T H È S E Présentée et publiquement soutenue devant LA FACULTÉ DE MÉDECINE DE MARSEILLE Le 21 Novembre 2019 Par Mr DIALLO Ousmane Oumou Né le 02 Février 1988 à Dalaba SURVEILLANCE DE LA RESISTANCE AUX ANTIBIOTIQUES DANS LA REGION PROVENCE ALPES COTE D’AZUR A PARTIR DES SYSTEMES DE SURVEILLANCE (MARSS et PACASURVE) Pour obtenir le grade de Doctorat d’Aix-Marseille Universités Spécialité Pathologie Humaine : Maladies infectieuses Membres du jury de Thèse Pr. Laurence Camoin Président du jury Pr. Jean Philippe Lavigne Rapporteur Pr. Max Maurin Rapporteur Pr. Jean-Marc Rolain Directeur de thèse MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille Faculté de Médecine, Marseille. 1 1 AVANT PROPOS Le format de présentation de cette thèse correspond à une recommandation de la spécialité Maladies Infectieuses et Microbiologie, à l’intérieur du Master des Sciences de la Vie et de la Santé qui dépend de l’École Doctorale des Sciences de la Vie de Marseille. Le candidat est amené à respecter des règles qui lui sont imposées et qui comportent un format de thèse utilisé dans le Nord de l’Europe et qui permet un meilleur rangement que les thèses traditionnelles. Par ailleurs, la partie introduction et bibliographie est remplacée par une revue envoyée dans un journal afin de permettre une évaluation extérieure de la qualité de la revue et de permettre à l’étudiant de commencer le plus tôt possible une bibliographie exhaustive sur le domaine de cette thèse. -
Identification and Virulence of Enterobacter Sakazakii
Industr & ial od M o i F c r Rajani et al., J Food Ind Microbiol 2016, 2:1 f o o b l i Journal of o a l n DOI: 10.4172/2572-4134.1000108 o r g u y o J ISSN: 2572-4134 Food & Industrial Microbiology Research Article Open Access Identification and Virulence of Enterobacter sakazakii Rajani CSR, Chaudhary A, Swarna A and Puniya AK* Dairy Microbiology Division, ICAR-National Dairy Research Institute, Karnal 132001, India Abstract Enterobacter sakazakii (formerly known as Cronobacter sakazakii) is an opportunistic pathogen that causes necrotizing enterocolitis, bacteremia and meningitis, especially in neonates. This study was an attempt to isolate E. sakazakii from different food and environmental sources so as to establish its presence and possible source of transmission. For this, 93 samples (i.e., 37 from dairy and 56 from non-dairy) were collected using standard procedures of sampling. Out of these samples, 45 isolates (i.e., 14 from dairy and 31 from other samples) were taken further on the basis of growth on tryptic soy agar. On further screening on the basis of Gram staining, catalase and oxidase test, only 27 isolates were observed to be positive. The positive isolates were also subjected to PCR based identification using species specific primers. Overall, 11 isolates confirmed E.as sakazakii were also tested for virulent characteristics (i.e., hemolytic activity, haemagglutination test and DNase production) and all the isolates were found to be positive showing a potential threat of infection through food commodities. Keywords: Enterobacter sakazakii; Cronobacter; Virulence lactoferrin showed some effect by reducing the viability of C. -
(12) United States Patent (10) Patent No.: US 8,785.499 B2 Mackerell, Jr
US008785499B2 (12) United States Patent (10) Patent No.: US 8,785.499 B2 Mackerell, Jr. et al. (45) Date of Patent: Jul. 22, 2014 (54) TARGETING NAD BIOSYNTHESIS IN Medicinal Chemistry Letters 18, 2008, pp. 3932-3937, cited BACTERAL PATHOGENS in ISR. A. K. Halve et al. “N/C-4 substituted azetidin-2-ones: Synthesis and (75) Inventors: Alexander Mackerell, Jr., Baltimore, preliminary evaluation as new class of antimicrobial agents.” MD (US); Hong Zhang, Dallas, TX Bioorganic & Medicinal Chemistry Letters 17, 2007, pp. 341-345, (US); Andrei Osterman, San Diego, CA cited in IRS. P. V. Desai et al. “Identification of Novel Parasitic Cysteine Protease (US); Rohit Kolhatkar, Loves Park, IL Inhibitors. Using Virtual Screening. 1. The ChemBridge Datebase.” (US) Journal of Medicinal Chemistry 2004, No. 47, pp. 6609-6615, cited (73) Assignees: University of Maryland, Baltimore, in ISR. H.J. Yoon et al..."Crystal Structure of Nicotinic Acid Mononucleotide Baltimore, MD (US); The Board of Adenylyltransferase from Pseudomonas aeruginosa in its Apo and Regents of the University of Texas Substrate-complexed Forms Reveals a Fully Open Conformation.” System, Austin, TX (US); Journal of Medicinal Chemistry, 2005, No. 351, pp. 258-265. Sanford-Burnham Medical Research S. Lu et al. “Structure of nicotinic acid mononucleotide Institute, La Jolla, CA (US) adenylyltransferase from Bacillus anthracis,” Structural Biology and Crystalization Communications, 2008, No. 64, pp. 893-898. (*) Notice: Subject to any disclaimer, the term of this H. Zhang et al. "Crystal Structures of E. coli Nicotinate patent is extended or adjusted under 35 Mononucleotide Adenylyltransferase and its Complex with U.S.C. -
A Taxonomic Note on the Genus Lactobacillus
Taxonomic Description template 1 A taxonomic note on the genus Lactobacillus: 2 Description of 23 novel genera, emended description 3 of the genus Lactobacillus Beijerinck 1901, and union 4 of Lactobacillaceae and Leuconostocaceae 5 Jinshui Zheng1, $, Stijn Wittouck2, $, Elisa Salvetti3, $, Charles M.A.P. Franz4, Hugh M.B. Harris5, Paola 6 Mattarelli6, Paul W. O’Toole5, Bruno Pot7, Peter Vandamme8, Jens Walter9, 10, Koichi Watanabe11, 12, 7 Sander Wuyts2, Giovanna E. Felis3, #*, Michael G. Gänzle9, 13#*, Sarah Lebeer2 # 8 '© [Jinshui Zheng, Stijn Wittouck, Elisa Salvetti, Charles M.A.P. Franz, Hugh M.B. Harris, Paola 9 Mattarelli, Paul W. O’Toole, Bruno Pot, Peter Vandamme, Jens Walter, Koichi Watanabe, Sander 10 Wuyts, Giovanna E. Felis, Michael G. Gänzle, Sarah Lebeer]. 11 The definitive peer reviewed, edited version of this article is published in International Journal of 12 Systematic and Evolutionary Microbiology, https://doi.org/10.1099/ijsem.0.004107 13 1Huazhong Agricultural University, State Key Laboratory of Agricultural Microbiology, Hubei Key 14 Laboratory of Agricultural Bioinformatics, Wuhan, Hubei, P.R. China. 15 2Research Group Environmental Ecology and Applied Microbiology, Department of Bioscience 16 Engineering, University of Antwerp, Antwerp, Belgium 17 3 Dept. of Biotechnology, University of Verona, Verona, Italy 18 4 Max Rubner‐Institut, Department of Microbiology and Biotechnology, Kiel, Germany 19 5 School of Microbiology & APC Microbiome Ireland, University College Cork, Co. Cork, Ireland 20 6 University of Bologna, Dept. of Agricultural and Food Sciences, Bologna, Italy 21 7 Research Group of Industrial Microbiology and Food Biotechnology (IMDO), Vrije Universiteit 22 Brussel, Brussels, Belgium 23 8 Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, Ghent, 24 Belgium 25 9 Department of Agricultural, Food & Nutritional Science, University of Alberta, Edmonton, Canada 26 10 Department of Biological Sciences, University of Alberta, Edmonton, Canada 27 11 National Taiwan University, Dept. -
Genomic Stability and Genetic Defense Systems in Dolosigranulum Pigrum A
bioRxiv preprint doi: https://doi.org/10.1101/2021.04.16.440249; this version posted April 18, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum a 2 Candidate Beneficial Bacterium from the Human Microbiome 3 4 Stephany Flores Ramosa, Silvio D. Bruggera,b,c, Isabel Fernandez Escapaa,c,d, Chelsey A. 5 Skeetea, Sean L. Cottona, Sara M. Eslamia, Wei Gaoa,c, Lindsey Bomara,c, Tommy H. 6 Trand, Dakota S. Jonese, Samuel Minote, Richard J. Robertsf, Christopher D. 7 Johnstona,c,e#, Katherine P. Lemona,d,g,h# 8 9 aThe Forsyth Institute (Microbiology), Cambridge, MA, USA 10 bDepartment of Infectious Diseases and Hospital Epidemiology, University Hospital 11 Zurich, University of Zurich, Zurich, Switzerland 12 cDepartment of Oral Medicine, Infection and Immunity, Harvard School of Dental 13 Medicine, Boston, MA, USA 14 dAlkek Center for Metagenomics & Microbiome Research, Department of Molecular 15 Virology & Microbiology, Baylor College of Medicine, Houston, Texas, USA 16 eVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, 17 Seattle, WA, USA 18 fNew England Biolabs, Ipswich, MA, USA 19 gDivision of Infectious Diseases, Boston Children’s Hospital, Harvard Medical School, 20 Boston, MA, USA 21 hSection of Infectious Diseases, Texas Children’s Hospital, Department of Pediatrics, 22 Baylor College of Medicine, Houston, Texas, USA 23 bioRxiv preprint doi: https://doi.org/10.1101/2021.04.16.440249; this version posted April 18, 2021. -
The Microbiome of Otitis Media with Effusion and the Influence of Alloiococcus Otitidis on Haemophilus Influenzae in Polymicrobial Biofilm
The microbiome of otitis media with effusion and the influence of Alloiococcus otitidis on Haemophilus influenzae in polymicrobial biofilm Chun L Chan Bachelor of Radiography and Medical Imaging (Honours) Bachelor of Medicine, Bachelor of Surgery Department of Otolaryngology, Head and Neck Surgery University of Adelaide, Adelaide, Australia Submitted for the title of Doctor of Philosophy November 2016 C L Chan i This thesis is dedicated to those who have sacrificed the most during my scientific endeavours My amazing family Flora, Aidan and Benjamin C L Chan ii Table of Contents TABLE OF CONTENTS .............................................................................................................................. III THESIS DECLARATION ............................................................................................................................. VII ACKNOWLEDGEMENTS ........................................................................................................................... VIII THESIS SUMMARY ................................................................................................................................... X PUBLICATIONS ARISING FROM THIS THESIS .................................................................................................. XII PRESENTATIONS ARISING FROM THIS THESIS ............................................................................................... XIII ABBREVIATIONS ................................................................................................................................... -
CHAPTER 1: General Introduction and Aims 1.1 the Genus Cronobacter: an Introduction
Diversity and virulence of the genus Cronobacter revealed by multilocus sequence typing (MLST) and comparative genomic analysis Susan Manju Joseph A thesis submitted in partial fulfilment of the requirements of Nottingham Trent University for the degree of Doctor of Philosophy July 2013 Experimental work contained in this thesis is original research carried out by the author, unless otherwise stated, in the School of Science and Technology at the Nottingham Trent University. No material contained herein has been submitted for any other degree, or at any other institution. This work is the intellectual property of the author. You may copy up to 5% of this work for private study, or personal, non-commercial research. Any re-use of the information contained within this document should be fully referenced, quoting the author, title, university, degree level and pagination. Queries or requests for any other use, or if a more substantial copy is required, should be directed in the owner(s) of the Intellectual Property Rights. Susan Manju Joseph ACKNOWLEDGEMENTS I would like to express my immense gratitude to my supervisor Prof. Stephen Forsythe for having offered me the opportunity to work on this very exciting project and for having been a motivating and inspiring mentor as well as friend through every stage of this PhD. His constant encouragement and availability for frequent meetings have played a very key role in the progress of this research project. I would also like to thank my co-supervisors, Dr. Alan McNally and Prof. Graham Ball for all the useful advice, guidance and participation they provided during the course of this PhD study. -
UCC Library and UCC Researchers Have Made This Item Openly Available
UCC Library and UCC researchers have made this item openly available. Please let us know how this has helped you. Thanks! Title Dairybiota: analysing the microbiota of the dairy chain using next generation sequencing Author(s) Doyle, Conor J. Publication date 2017 Original citation Doyle, C. 2017. Dairybiota: analysing the microbiota of the dairy chain using next generation sequencing. PhD Thesis, University College Cork. Type of publication Doctoral thesis Rights © 2017, Conor Doyle. http://creativecommons.org/licenses/by-nc-nd/3.0/ Embargo information No embargo required Item downloaded http://hdl.handle.net/10468/5524 from Downloaded on 2021-10-09T03:33:35Z Dairybiota: analysing the microbiota of the dairy chain using next generation sequencing A thesis presented to the National University of Ireland for the degree of Doctor of Philosophy By Conor Doyle B.Sc Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Ireland School of Microbiology, University College Cork, Cork, Ireland 2017 Research supervisors: Dr. Paul Cotter and Professor Paul O’Toole i “And all this science, I don’t understand. It’s just my job five days a week” Rocket man “No number of sightings of white swans can prove the theory that all swans are white. The sighting of just one black one may disprove it.” Karl Popper ii Table of Contents Declaration .........................................................................................................................................x Abstract ..............................................................................................................................................xi -
OXOID MANUAL PRELIMS 16/6/06 12:18 Pm Page 1
OXOID MANUAL PRELIMS 16/6/06 12:18 pm Page 1 The OXOID MANUAL 9th Edition 2006 Compiled by E. Y. Bridson (substantially revised) (former Technical Director of Oxoid) Price: £50 OXOID MANUAL PRELIMS 16/6/06 12:18 pm Page 2 The OXOID MANUAL 9th Edition 2006 Compiled by E. Y. Bridson (substantially revised) (former Technical Director of Oxoid) 9th Edition 2006 Published by OXOID Limited, Wade Road, Basingstoke, Hampshire RG24 8PW, England Telephone National: 01256 841144 International: +44 1256 841144 Email: [email protected] Facsimile National: 01256 463388 International: +44 1256 463388 Website http://www.oxoid.com OXOID SUBSIDIARIES AROUND THE WORLD AUSTRALIA DENMARK NEW ZEALAND Oxoid Australia Pty Ltd Oxoid A/S Oxoid NZ Ltd 20 Dalgleish Street Lunikvej 28 3 Atlas Place Thebarton, Adelaide DK-2670 Greve, Denmark Mairangi Bay South Australia 5031, Australia Tel: 45 44 97 97 35 Auckland 1333, New Zealand Tel: 618 8238 9000 or Fax: 45 44 97 97 45 Tel: 00 64 9 478 0522 Tel: 1 800 331163 Toll Free Email: [email protected] NORWAY Fax: 618 8238 9060 or FRANCE Oxoid AS Fax: 1 800 007054 Toll Free Oxoid s.a. Nils Hansen vei 2, 3 etg Email: [email protected] 6 Route de Paisy BP13 0667 Oslo BELGIUM 69571 Dardilly Cedex, France PB 6490 Etterstad, 0606 Oxoid N.V./S.A. Tel: 33 4 72 52 33 70 Oslo, Norway Industriepark, 4E Fax: 33 4 78 66 03 76 Tel: 47 23 03 9690 B-9031 Drongen, Belgium Email: [email protected] Fax: 47 23 09 96 99 Tel: 32 9 2811220 Email: [email protected] GERMANY Fax: 32 9 2811223 Oxoid GmbH SPAIN Email: [email protected] Postfach 10 07 53 Oxoid S.A. -
Laboratory Diagnosis of Shigella and Salmonella Infections *
Bull. Org. mond. Sante) 1959, 21, Bull. Wid Hlth Org. 247-277 Laboratory Diagnosis of Shigella and Salmonella Infections * E. HORMAECHE, M.D.' & C. A. PELUFFO, M.D.2 In recent years a great deal of work has been We are aware that experienced bacteriologists devoted to the study of enteric diseases and, in will prefer some of the methods they are using to consequence, many methods have been developed the ones we recommend. This study is not in- for the isolation of their most common agents, tended for them, however, but rather as a guide to Shigella, Salmonella and some pathogenic Esche- people who are just starting work on enteric diseases richia, while at the same time new tests have been diagnosis. For more detailed information, we devised to differentiate the " groups " of the Entero- recommend the books of Kauffmann (1954) and bacteriaceae family, so that the beginner, especially, Edwards & Ewing (1955), of which we have made will be faced with the difficulty of selecting from ample use. among them those to be used. Investigation of enteric pathogens will sometimes Each author has his preferences according to his be the ultimate purpose, as for the public health own experience, and it is regrettable that up to now officer, who is primarily interested in finding them no serious effort has been made to standardize for the potential danger they represent to the com- techniques, which would save a lot of time and dis- munity. In clinical medicine, however, the role couraging failures for the bacteriologist unex- played by the bacteriologist does not end there. -
Biodegradation Treatment of Petrochemical Wastewaters
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA VEGETAL Biodegradation treatment of petrochemical wastewaters Catarina Isabel Nunes Alexandre Dissertação Mestrado em Microbiologia Aplicada Orientadores Doutora Sandra Sanches Professora Doutora Lélia Chambel 2015 Biodegradation treatment of petrochemical wastewaters Catarina Isabel Nunes Alexandre 2015 This thesis was fully performed at the Institute of Experimental and Technologic Biology (IBET) of Instituto de Tecnologia Química e Bioquímica (ITQB) under the direct supervision of Drª Sandra Sanches in the scope of the Master in Applied Microbiology of the Faculty of Sciences of the University of Lisbon. Prof. Drª Lélia Chambel was the internal designated supervisor in the scope of the Master in Applied Microbiology of the Faculty of Sciences of the University of Lisbon. Agradecimentos Gostaria de agradecer a todas as pessoas que estiveram directamente ou indirectamente envolvidas na execução da minha tese de mestrado, pois sem eles a sua realização não teria sido possível. Queria começar por agradecer à Doutora Sandra Sanches, que se demonstrou sempre disponível para esclarecer dúvidas quando precisei, e que fez questão de me ensinar de forma rigorosa e exigente. À Doutora Maria Teresa Crespo, que assim que lhe pedi para me orientar me disse que sim imediatamente, fez questão de me treinar em vários contextos e sempre estimulou o meu envolvimento nas rotinas do laboratório. À Professora Doutora Lélia Chambel, que sempre me esclareceu dúvidas sobre processos burocráticos, me deu conselhos quando eu mais precisei e que me apoiou durante toda a minha tese. Queria também agradecer à Doutora Dulce Brito, que sempre se mostrou disponível para ajudar quando a nossa equipa mais precisava dela, e sempre me ajudou a realizar as tarefas mais básicas do meu trabalho até eu ter ganho a minha autonomia no laboratório.