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Perspectives
Copyright 2003 by the Genetics Society of America Perspectives Anecdotal, Historical and Critical Commentaries on Genetics Edited by James F. Crow and William F. Dove C. C. Tan: A Life of Peaks and Valleys James F. Crow Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706 first met C. C. Tan (Tan Jiazhen) in 1946 at the of the spots if they do occur. The penetrance and size of I University of Texas in Austin where I was visiting at spots are greater at lower developmental temperatures. the time. He was there to give a seminar on “mosaic The other 11 alleles produce a much larger amount dominance” in ladybird (aka ladybug) beetles. I was of black pigment, which may cover almost all the elytron, particularly interested because of the similarity to the and the location of the black pigment is constant for a pattern expression of scute alleles in Drosophila melanogas- particular allele. Each of these alleles is dominant to ter and was eager to talk to him about this and about s, and each acts independently of the others. Thus, his D. pseudoobscura work with Dobzhansky and Sturte- heterozygotes for two different dominant alleles are vant. So we arranged to have dinner together. We went black in all areas that would be black in either of the by trolley to a Chinese restaurant, Sam Wah’s, which I two constituent homozygotes. Tan (1946a) called this believe was the only one in Austin. He suggested that mosaic dominance. The yellow areas are conditioned he order the food, since by speaking in the native lan- by the s allele. -
Multi-Targeted Mechanisms Underlying the Endothelial Protective Effects of the Diabetic-Safe Sweetener Erythritol
Multi-Targeted Mechanisms Underlying the Endothelial Protective Effects of the Diabetic-Safe Sweetener Erythritol Danie¨lle M. P. H. J. Boesten1*., Alvin Berger2.¤, Peter de Cock3, Hua Dong4, Bruce D. Hammock4, Gertjan J. M. den Hartog1, Aalt Bast1 1 Department of Toxicology, Maastricht University, Maastricht, The Netherlands, 2 Global Food Research, Cargill, Wayzata, Minnesota, United States of America, 3 Cargill RandD Center Europe, Vilvoorde, Belgium, 4 Department of Entomology and UCD Comprehensive Cancer Center, University of California Davis, Davis, California, United States of America Abstract Diabetes is characterized by hyperglycemia and development of vascular pathology. Endothelial cell dysfunction is a starting point for pathogenesis of vascular complications in diabetes. We previously showed the polyol erythritol to be a hydroxyl radical scavenger preventing endothelial cell dysfunction onset in diabetic rats. To unravel mechanisms, other than scavenging of radicals, by which erythritol mediates this protective effect, we evaluated effects of erythritol in endothelial cells exposed to normal (7 mM) and high glucose (30 mM) or diabetic stressors (e.g. SIN-1) using targeted and transcriptomic approaches. This study demonstrates that erythritol (i.e. under non-diabetic conditions) has minimal effects on endothelial cells. However, under hyperglycemic conditions erythritol protected endothelial cells against cell death induced by diabetic stressors (i.e. high glucose and peroxynitrite). Also a number of harmful effects caused by high glucose, e.g. increased nitric oxide release, are reversed. Additionally, total transcriptome analysis indicated that biological processes which are differentially regulated due to high glucose are corrected by erythritol. We conclude that erythritol protects endothelial cells during high glucose conditions via effects on multiple targets. -
P020110307527551165137.Pdf
CONTENT 1.MESSAGE FROM DIRECTOR …………………………………………………………………………………………………………………………………………………… 03 2.ORGANIZATION STRUCTURE …………………………………………………………………………………………………………………………………………………… 05 3.HIGHLIGHTS OF ACHIEVEMENTS …………………………………………………………………………………………………………………………………………… 06 Coexistence of Conserve and Research----“The Germplasm Bank of Wild Species ” services biodiversity protection and socio-economic development ………………………………………………………………………………………………………………………………………………… 06 The Structure, Activity and New Drug Pre-Clinical Research of Monoterpene Indole Alkaloids ………………………………………… 09 Anti-Cancer Constituents in the Herb Medicine-Shengma (Cimicifuga L) ……………………………………………………………………………… 10 Floristic Study on the Seed Plants of Yaoshan Mountain in Northeast Yunnan …………………………………………………………………… 11 Higher Fungi Resources and Chemical Composition in Alpine and Sub-alpine Regions in Southwest China ……………………… 12 Research Progress on Natural Tobacco Mosaic Virus (TMV) Inhibitors…………………………………………………………………………………… 13 Predicting Global Change through Reconstruction Research of Paleoclimate………………………………………………………………………… 14 Chemical Composition of a traditional Chinese medicine-Swertia mileensis……………………………………………………………………………… 15 Mountain Ecosystem Research has Made New Progress ………………………………………………………………………………………………………… 16 Plant Cyclic Peptide has Made Important Progress ………………………………………………………………………………………………………………… 17 Progresses in Computational Chemistry Research ………………………………………………………………………………………………………………… 18 New Progress in the Total Synthesis of Natural Products ……………………………………………………………………………………………………… -
Aneuploidy: Using Genetic Instability to Preserve a Haploid Genome?
Health Science Campus FINAL APPROVAL OF DISSERTATION Doctor of Philosophy in Biomedical Science (Cancer Biology) Aneuploidy: Using genetic instability to preserve a haploid genome? Submitted by: Ramona Ramdath In partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomedical Science Examination Committee Signature/Date Major Advisor: David Allison, M.D., Ph.D. Academic James Trempe, Ph.D. Advisory Committee: David Giovanucci, Ph.D. Randall Ruch, Ph.D. Ronald Mellgren, Ph.D. Senior Associate Dean College of Graduate Studies Michael S. Bisesi, Ph.D. Date of Defense: April 10, 2009 Aneuploidy: Using genetic instability to preserve a haploid genome? Ramona Ramdath University of Toledo, Health Science Campus 2009 Dedication I dedicate this dissertation to my grandfather who died of lung cancer two years ago, but who always instilled in us the value and importance of education. And to my mom and sister, both of whom have been pillars of support and stimulating conversations. To my sister, Rehanna, especially- I hope this inspires you to achieve all that you want to in life, academically and otherwise. ii Acknowledgements As we go through these academic journeys, there are so many along the way that make an impact not only on our work, but on our lives as well, and I would like to say a heartfelt thank you to all of those people: My Committee members- Dr. James Trempe, Dr. David Giovanucchi, Dr. Ronald Mellgren and Dr. Randall Ruch for their guidance, suggestions, support and confidence in me. My major advisor- Dr. David Allison, for his constructive criticism and positive reinforcement. -
Journal of Current Chinese Affairs
China Data Supplement May 2007 J People’s Republic of China J Hong Kong SAR J Macau SAR J Taiwan ISSN 0943-7533 China aktuell Data Supplement – PRC, Hong Kong SAR, Macau SAR, Taiwan 1 Contents The Main National Leadership of the PRC .......................................................................... 2 LIU Jen-Kai The Main Provincial Leadership of the PRC ..................................................................... 30 LIU Jen-Kai Data on Changes in PRC Main Leadership ...................................................................... 37 LIU Jen-Kai PRC Agreements with Foreign Countries ......................................................................... 42 LIU Jen-Kai PRC Laws and Regulations .............................................................................................. 44 LIU Jen-Kai Hong Kong SAR ................................................................................................................ 45 LIU Jen-Kai Macau SAR ....................................................................................................................... 52 LIU Jen-Kai Taiwan .............................................................................................................................. 56 LIU Jen-Kai ISSN 0943-7533 All information given here is derived from generally accessible sources. Publisher/Distributor: GIGA Institute of Asian Studies Rothenbaumchaussee 32 20148 Hamburg Germany Phone: +49 (0 40) 42 88 74-0 Fax: +49 (040) 4107945 2 May 2007 The Main National Leadership of the PRC -
Inherited Variants in Mitochondrial Biogenesis Genes May Influence Epithelial Ovarian Cancer Risk Jennifer Permuth-Wey1,2, Y. An
Author Manuscript Published OnlineFirst on March 29, 2011; DOI: 10.1158/1055-9965.EPI-10-1224 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Inherited Variants in Mitochondrial Biogenesis Genes May Influence Epithelial Ovarian Cancer Risk Jennifer Permuth-Wey1,2, Y. Ann Chen3 ,Ya-Yu Tsai1, Zhihua Chen4, Xiaotao Qu4, Johnathan M. Lancaster5, Heather Stockwell2, Getachew Dagne2, Edwin Iversen6, Harvey Risch7, Jill Barnholtz-Sloan8, Julie M. Cunningham9, Robert A. Vierkant10, Brooke L. Fridley10, Rebecca Sutphen11, John McLaughlin12, Steven A. Narod13, Ellen L. Goode10, Joellen M. Schildkraut14, David Fenstermacher4, Catherine M. Phelan1, and Thomas A. Sellers1 1Department of Cancer Epidemiology, Moffitt Cancer Center, Tampa, FL, USA. 2 Department of Epidemiology and Biostatistics, College of Public Health, University of South Florida, Tampa, FL, USA. 3 Department of Biostatistics, Moffitt Cancer Center, Tampa, FL, USA. 4 Department of Biomedical Informatics, Moffitt Cancer Center, Tampa, FL, USA. 5 Department of Women’s Oncology, Moffitt Cancer Center, Tampa, FL, USA. 6 Department of Statistical Science, Duke University Medical Center, Durham, NC, USA. 7Department of Epidemiology and Public Health, Yale University School of Medicine, New Haven, CT, USA. 8Case Comprehensive Cancer Center, Case School of Medicine, Cleveland, OH, USA. 9 Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, MN, USA. 10Department of Health Sciences Research, Mayo Clinic College of Medicine, Rochester, MN, USA. 11Pediatrics Epidemiology Center, College of Medicine, University of South Florida, Tampa, FL, USA. 12Samuel Lunenfeld Research Institute, Toronto, Ontario, Canada. 13Center for Research in Women’s Health, Toronto, ON, Canada. 14Department of Community and Family Medicine, Duke University Medical Center, Durham, NC, USA. -
Gene Expression in the Mouse Eye: an Online Resource for Genetics Using 103 Strains of Mice
Molecular Vision 2009; 15:1730-1763 <http://www.molvis.org/molvis/v15/a185> © 2009 Molecular Vision Received 3 September 2008 | Accepted 25 August 2009 | Published 31 August 2009 Gene expression in the mouse eye: an online resource for genetics using 103 strains of mice Eldon E. Geisert,1 Lu Lu,2 Natalie E. Freeman-Anderson,1 Justin P. Templeton,1 Mohamed Nassr,1 Xusheng Wang,2 Weikuan Gu,3 Yan Jiao,3 Robert W. Williams2 (First two authors contributed equally to this work) 1Department of Ophthalmology and Center for Vision Research, Memphis, TN; 2Department of Anatomy and Neurobiology and Center for Integrative and Translational Genomics, Memphis, TN; 3Department of Orthopedics, University of Tennessee Health Science Center, Memphis, TN Purpose: Individual differences in patterns of gene expression account for much of the diversity of ocular phenotypes and variation in disease risk. We examined the causes of expression differences, and in their linkage to sequence variants, functional differences, and ocular pathophysiology. Methods: mRNAs from young adult eyes were hybridized to oligomer microarrays (Affymetrix M430v2). Data were embedded in GeneNetwork with millions of single nucleotide polymorphisms, custom array annotation, and information on complementary cellular, functional, and behavioral traits. The data include male and female samples from 28 common strains, 68 BXD recombinant inbred lines, as well as several mutants and knockouts. Results: We provide a fully integrated resource to map, graph, analyze, and test causes and correlations of differences in gene expression in the eye. Covariance in mRNA expression can be used to infer gene function, extract signatures for different cells or tissues, to define molecular networks, and to map quantitative trait loci that produce expression differences. -
Impact of the Mitochondrial Genetic Background in Complex III Deficiency
Impact of the Mitochondrial Genetic Background in Complex III Deficiency Mari Carmen Gil Borlado1., David Moreno Lastres1,2., Maritza Gonzalez Hoyuela1., Maria Moran1,2, Alberto Blazquez1,2, Rosa Pello1, Lorena Marin Buera1,2, Toni Gabaldon3, Juan Jose Garcia Pen˜ as4, Miguel A. Martı´n1,2, Joaquin Arenas1,2, Cristina Ugalde1,2* 1 Centro de Investigacio´n, Hospital Universitario 12 de Octubre, Madrid, Spain, 2 Centro de Investigacio´n Biome´dica en Red de Enfermedades Raras-CIBERER, U723, Madrid, Spain, 3 Centre for Genomic Regulation-CRG, Barcelona, Spain, 4 Servicio de Neurologı´a, Hospital Universitario Nin˜o Jesu´s, Madrid, Spain Abstract Background: In recent years clinical evidence has emphasized the importance of the mtDNA genetic background that hosts a primary pathogenic mutation in the clinical expression of mitochondrial disorders, but little experimental confirmation has been provided. We have analyzed the pathogenic role of a novel homoplasmic mutation (m.15533 A.G) in the cytochrome b (MT-CYB) gene in a patient presenting with lactic acidosis, seizures, mild mental delay, and behaviour abnormalities. Methodology: Spectrophotometric analyses of the respiratory chain enzyme activities were performed in different tissues, the whole muscle mitochondrial DNA of the patient was sequenced, and the novel mutation was confirmed by PCR-RFLP. Transmitochondrial cybrids were constructed to confirm the pathogenicity of the mutation, and assembly/stability studies were carried out in fibroblasts and cybrids by means of mitochondrial translation inhibition in combination with blue native gel electrophoresis. Principal Findings: Biochemical analyses revealed a decrease in respiratory chain complex III activity in patient’s skeletal muscle, and a combined enzyme defect of complexes III and IV in fibroblasts. -
Alzheimer's Disease Is Associated With
Alzheimer’s disease is associated with reduced expression of energy metabolism genes in posterior cingulate neurons Winnie S. Liang*†, Eric M. Reiman*†‡§, Jon Valla†¶, Travis Dunckley*†, Thomas G. Beach†ʈ, Andrew Grover†ʈ, Tracey L. Niedzielko†¶, Lonnie E. Schneider†¶, Diego Mastroeni†ʈ, Richard Caselli†**, Walter Kukull††, John C. Morris‡‡, Christine M. Hulette§§, Donald Schmechel§§, Joseph Rogers†ʈ, and Dietrich A. Stephan*†¶¶ *Neurogenomics Division, Translational Genomics Research Institute, 445 North Fifth Street, Phoenix, AZ 85004; †Arizona Alzheimer’s Consortium, 901 East Willetta Street, Phoenix, AZ 85006; ‡Banner Alzheimer’s Institute, 901 East Willetta Street Phoenix, AZ 85006; §Department of Psychiatry and Evelyn F. McKnight Brain Institute, University of Arizona, 1501 North Campbell Avenue, Tucson, AZ 85724; ¶Barrow Neurological Institute, 350 West Thomas Road, Phoenix, AZ 85013; ʈSun Health Research Institute, 10515 West Santa Fe Drive, Sun City, AZ 85351; **Department of Neurology, Mayo Clinic, 13400 East Shea Boulevard, Scottsdale, AZ 85259; ††National Alzheimer’s Coordinating Center, 4311 11th Avenue NE, No. 300, Seattle, WA 98105; ‡‡Washington University Alzheimer’s Disease Research Center, Washington University School of Medicine, 4488 Forest Park Avenue, Suite 101, St. Louis, MO 63108; and §§Bryan Alzheimer’s Disease Research Center, Duke University Medical Center, 2200 West Main Street, Suite A200, Durham, NC 27705 Edited by Marcus E. Raichle, Washington University School of Medicine, St. Louis, MO, and approved January 15, 2008 (received for review September 28, 2007) Alzheimer’s disease (AD) is associated with regional reductions in of genetic risk for AD) and were progressive in late-middle-aged fluorodeoxyglucose positron emission tomography (FDG PET) mea- persons (19). -
Him Mark Lai Container List.Docx
Finding Aid to the Him Mark Lai research files, additions, 1834-2009 (bulk 1970-2008) Collection number: AAS ARC 2010/1 Ethnic Studies Library University of California, Berkeley Berkeley, California Funding for processing this collection was provided by Mrs. Laura Lai. Date Completed: June 2014 Finding Aid Written By: Dongyi (Helen) Qi, Haochen (Daniel) Shan, Shuyu (Clarissa) Lu, and Janice Otani. © 2014 The Regents of the University of California. All rights reserved. COLLECTION SUMMARY Collection Title: Him Mark Lai research files, additions, 1834-2009 (bulk 1970-2008) Collection Number: AAS ARC 2010/1 Creator: Lai, H. Mark Extent: 95 Cartons, 33 Boxes, 7 Oversize Folders; (131.22 linear feet) Repository: Ethnic Studies Library University of California, Berkeley Berkeley, California, 94720-2360 Phone: (510) 643-1234 Fax: (510) 643-8433 Email: [email protected] Abstract: The research files are a continuation of (AAS ARC 2000/80) Him Mark Lai’s collected sources, along with his own writings and professional activity materials that relate to the history, communities, and organizations of Chinese Americans and Chinese overseas. The collection is divided into four series: Research Files, including general subjects, people, and organizations; Writings, including books, articles and indexes; Professional activities, primarily including teaching lectures, Chinese Community Hour program tapes, In Search of Roots program materials, consultation projects, interviews with Chinese Americans, conference and community events; Personal, including memorial tributes; correspondence, photographs, and slides of family and friends. The collection consists of manuscripts, papers, drafts, indexes, correspondence, organization records, reports, legal documents, yearbooks, announcements, articles, newspaper samples, newspaper clippings, publications, photographs, slides, maps, and audio tapes. -
Supplemental Material For
SUPPLEMENTAL MATERIAL FOR Coexpression network based on natural variation in human gene expression reveals gene interactions and functions Renuka Nayak, Michael Kearns, Richard S. Spielman, Vivian G. Cheung Supplementary Figure 1 Supplementary Table 1. Gene pairs whose correlations in gene expression levels differ significantly (Pc<0.05) among the 3 datasets. Supplementary Table 2. Gene pairs that are correlated in gene expression levels with |R|>0.5 and are found within 500 kb of each other. Supplementary Table 3. Predicted functions of poorly characterized genes based on the functions of neighboring genes. Supplementary Figure 1. Genes identified in genome-wide association studies (grey) and their neighbors in the network. Red and green connections refer to positive and negative correlations, respectively. MICB has been implicated in AIDS progression (PMID: 19115949) TNF has been implicated in AIDS progression (PMID: 19115949) LTB has been implicated in AIDS progression (PMID: 19115949) ZNF224 has been implicated in Alzheimer's disease (PMID: 19118814) NDUFAB1 has been implicated in bipolar disorder (PMID: 17554300) SFRS10 has been implicated in body mass index (PMID: 19079260) and weight (PMID: 19079260) CTNNBL1 has been implicated in bone mineral density (PMID: 17903296) TGFBR3 has been implicated in bone mineral density (PMID: 19249006) IGF2R has been implicated in brain lesion load (PMID: 19010793) LSP1 has been implicated in breast cancer (PMID: 17529967) FBN1 has been implicated in breast cancer (PMID: 17903305) GLG1 has been implicated in breast cancer (PMID: 18463975) SCHIP1 has been implicated in Celiac disease (PMID: 18311140) RGS1 has been implicated in Celiac disease (PMID: 18311140) FADS2 has been implicated in Cholesterol (total) (PMID: 19060911), HDL cholesterol (PMID: 19060911, 19060906), LDL cholesterol (PMID: 19060911, 19060910), and triglycerides (PMID: 19060906). -
Noncoding RNA: from Dark Matter to Bright Star SCIENCE CHINA
SCIENCE CHINA Life Sciences SPECIAL TOPIC: Noncoding RNA: from dark matter to bright star April 2020 Vol.63 No.4: 463–468 •EDITORIAL• https://doi.org/10.1007/s11427-020-1676-5 Noncoding RNA: from dark matter to bright star Yuanchao Xue1,4, Runsheng Chen1,4*, Lianghu Qu2* & Xiaofeng Cao3,4* 1Key Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China; 2MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory for Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, China; 3State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; 4University of Chinese Academy of Sciences, Beijing 100049, China Received March 5, 2020; published online March 13, 2020 Citation: Xue, Y., Chen, R., Qu, L., and Cao, X. (2020). Noncoding RNA: from dark matter to bright star. Sci China Life Sci 63, 463–468. https://doi.org/ 10.1007/s11427-020-1676-5 The central dogma states that genes encoded in the DNA Chinese scientists have been actively joining the race for should be first transcribed into messenger RNA (mRNA) and annotating new noncoding genes in the “dark matter” part, then translated into functional proteins (Crick, 1970). This which turned out to be transcribed pervasively for generating dogma has been written in numerous textbooks and learned a massive amount of noncoding RNAs (ncRNAs) (Djebali et by myriad students. However, along with the completion of al., 2012). Among them, China has made tremendous con- the human genome project in June 2000, an astonishing fact tributions in discovering new small nucleolar RNAs (snoR- was revealed: only 1.5% of the human genome encodes for NAs), microRNAs (miRNAs), Piwi-interacting RNAs proteins (Lander et al., 2001; Venter et al., 2001).