Cryptococcosis
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Cryptococcus Neoformans</Em>
Clemson University TigerPrints All Dissertations Dissertations December 2019 Role of Cryptococcus neoformans Pyruvate Decarboxylase and Aldehyde Dehydrogenase Enzymes in Acetate Production and Virulence Mufida Ahmed Nagi Ammar Clemson University, [email protected] Follow this and additional works at: https://tigerprints.clemson.edu/all_dissertations Recommended Citation Ammar, Mufida Ahmed Nagi, "Role of Cryptococcus neoformans Pyruvate Decarboxylase and Aldehyde Dehydrogenase Enzymes in Acetate Production and Virulence" (2019). All Dissertations. 2488. https://tigerprints.clemson.edu/all_dissertations/2488 This Dissertation is brought to you for free and open access by the Dissertations at TigerPrints. It has been accepted for inclusion in All Dissertations by an authorized administrator of TigerPrints. For more information, please contact [email protected]. Role of Cryptococcus neoformans Pyruvate Decarboxylase and Aldehyde Dehydrogenase Enzymes in Acetate Production and Virulence A Dissertation Presented to the Graduate School of Clemson University In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Biochemistry and Molecular Biology by Mufida Ahmed Nagi Ammar December 2019 Accepted by: Dr. Kerry Smith, Committee Chair Dr. Julia Frugoli Dr. Cheryl Ingram-Smith Dr. Lukasz Kozubowski ABSTRACT The basidiomycete Cryptococcus neoformans is is an invasive opportunistic pathogen of the central nervous system and the most frequent cause of fungal meningitis. C. neoformans enters the host by inhalation and protects itself from immune assault in the lungs by producing hydrolytic enzymes, immunosuppressants, and other virulence factors. C. neoformans also adapts to the environment inside the host, including producing metabolites that may confer survival advantages. One of these, acetate, can be kept in reserve as a carbon source or can be used to weaken the immune response by lowering local pH or as a key part of immunomodulatory molecules. -
Idiopathic CD4 Lymphocytopenia: Spectrum of Opportunistic Infections, Malignancies, and Autoimmune Diseases
Published online: 2021-08-09 REVIEW ARTICLE Idiopathic CD4 Lymphocytopenia: Spectrum of opportunistic infections, malignancies, and autoimmune diseases Dina S. Ahmad, Mohammad Esmadi, William C. Steinmann Department of Internal Medicine, University of Missouri School of Medicine, Columbia, MO, USA Access this article online ABSTRACT Website: www.avicennajmed.com DOI: 10.4103/2231-0770.114121 Idiopathic CD4 lymphocytopenia (ICL) was first defined in 1992 by the US Centers for Disease Quick Response Code: Control and Prevention (CDC) as the repeated presence of a CD4+ T lymphocyte count of fewer than 300 cells per cubic millimeter or of less than 20% of total T cells with no evidence of human immunodeficiency virus (HIV) infection and no condition that might cause depressed CD4 counts. Most of our knowledge about ICL comes from scattered case reports. The aim of this study was to collect comprehensive data from the previously published cases to understand the characteristics of this rare condition. We searched the PubMed database and Science Direct for case reports since 1989 for Idiopathic CD4 lymphocytopenia cases. We found 258 cases diagnosed with ICL in 143 published papers. We collected data about age, sex, pathogens, site of infections, CD4 count, CD8 count, CD4:CD8 ratio, presence of HIV risk factors, malignancies, autoimmune diseases and whether the patients survived or died. The mean age at diagnosis of first opportunistic infection (or ICL if no opportunistic infection reported) was 40.7 ± 19.2 years (standard deviation), with a range of 1 to 85. One-sixty (62%) patients were males, 91 (35.2%) were females, and 7 (2.7%) patients were not identified whether males or females. -
Estimated Burden of Fungal Infections in Oman
Journal of Fungi Article Estimated Burden of Fungal Infections in Oman Abdullah M. S. Al-Hatmi 1,2,3,* , Mohammed A. Al-Shuhoumi 4 and David W. Denning 5 1 Department of microbiology, Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman 2 Department of microbiology, Centre of Expertise in Mycology Radboudumc/CWZ, 6500 Nijmegen, The Netherlands 3 Foundation of Atlas of Clinical Fungi, 1214GP Hilversum, The Netherlands 4 Ibri Hospital, Ministry of Health, Ibri 115, Oman; [email protected] 5 Manchester Fungal Infection Group, Manchester Academic Health Science Centre, The University of Manchester, Manchester M13 9PL, UK; [email protected] * Correspondence: [email protected]; Tel.: +968-25446328; Fax: +968-25446612 Abstract: For many years, fungi have emerged as significant and frequent opportunistic pathogens and nosocomial infections in many different populations at risk. Fungal infections include disease that varies from superficial to disseminated infections which are often fatal. No fungal disease is reportable in Oman. Many cases are admitted with underlying pathology, and fungal infection is often not documented. The burden of fungal infections in Oman is still unknown. Using disease frequencies from heterogeneous and robust data sources, we provide an estimation of the incidence and prevalence of Oman’s fungal diseases. An estimated 79,520 people in Oman are affected by a serious fungal infection each year, 1.7% of the population, not including fungal skin infections, chronic fungal rhinosinusitis or otitis externa. These figures are dominated by vaginal candidiasis, followed by allergic respiratory disease (fungal asthma). An estimated 244 patients develop invasive aspergillosis and at least 230 candidemia annually (5.4 and 5.0 per 100,000). -
153.Full.Pdf
Copyright Ó 2010 by the Genetics Society of America DOI: 10.1534/genetics.109.113027 A Tetrad Analysis of the Basidiomycete Fungus Cryptococcus neoformans Alexander Idnurm Division of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110 Manuscript received December 10, 2009 Accepted for publication February 9, 2010 ABSTRACT Cryptococcus neoformans is a basidiomycete fungus that is found worldwide and causes disease in humans and animal species. The fungus grows asexually as a budding yeast. Under laboratory conditions it is capable of sexual reproduction between two mating types. After cell fusion a dikaryotic filament develops, at the tip of which a basidium gives rise to four chains of basidiospores. Because the chains each comprise 10–30 spores, rather than single spores, the analysis of individual meiotic events has not been attempted in C. neoformans in the style of tetrad analyses performed in other fungal species. Here, the basidiospores from .100 basidia were micromanipulated and the resultant .2500 progeny analyzed for three genetic markers to understand the sexual process in this fungus, leading to four observations: (i) Marker seg- regation provides genetic evidence for a single meiotic event within the basidium followed by multiple rounds of mitosis. (ii) Using each basidium as an unordered tetrad, the ADE2 and URA5 genes are linked to their centromeres, consistent with adjacent genomic regions rich in repetitive elements predicted to comprise Cryptococcus centromeres. (iii) Lack of germination of basidiospores is attributed to aneuploidy, rather than dormancy. (iv) Analysis of basidiospores derived from single chains demonstrates that each chain can contain different genotypes. -
Virulence of Two Entomophthoralean Fungi, Pandora Neoaphidis
Article Virulence of Two Entomophthoralean Fungi, Pandora neoaphidis and Entomophthora planchoniana, to Their Conspecific (Sitobion avenae) and Heterospecific (Rhopalosiphum padi) Aphid Hosts Ibtissem Ben Fekih 1,2,3,*, Annette Bruun Jensen 2, Sonia Boukhris-Bouhachem 1, Gabor Pozsgai 4,5,*, Salah Rezgui 6, Christopher Rensing 3 and Jørgen Eilenberg 2 1 Plant Protection Laboratory, National Institute of Agricultural Research of Tunisia, Rue Hédi Karray, Ariana 2049, Tunisia; [email protected] 2 Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 3rd floor, 1871 Frederiksberg C, Denmark; [email protected] (A.B.J.); [email protected] (J.E.) 3 Institute of Environmental Microbiology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China; [email protected] 4 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China 5 Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou 350002, China 6 Department of ABV, National Agronomic Institute of Tunisia, 43 Avenue Charles Nicolle, 1082 EL Menzah, Tunisia; [email protected] * Correspondence: [email protected] (I.B.F.); [email protected] (G.P.) Received: 03 December 2018; Accepted: 02 February 2019; Published: 13 February 2019 Abstract: Pandora neoaphidis and Entomophthora planchoniana (phylum Entomophthoromycota) are important fungal pathogens on cereal aphids, Sitobion avenae and Rhopalosiphum padi. Here, we evaluated and compared for the first time the virulence of these two fungi, both produced in S. avenae cadavers, against the two aphid species subjected to the same exposure. Two laboratory bioassays were carried out using a method imitating entomophthoralean transmission in the field. -
Stress Adaptation in a Pathogenic Fungus
© 2014. Published by The Company of Biologists Ltd | The Journal of Experimental Biology (2014) 217, 144-155 doi:10.1242/jeb.088930 REVIEW Stress adaptation in a pathogenic fungus Alistair J. P. Brown*, Susan Budge, Despoina Kaloriti, Anna Tillmann, Mette D. Jacobsen, Zhikang Yin, Iuliana V. Ene‡, Iryna Bohovych§, Doblin Sandai¶, Stavroula Kastora, Joanna Potrykus, Elizabeth R. Ballou, Delma S. Childers, Shahida Shahana and Michelle D. Leach** ABSTRACT normally exists as a harmless commensal organism in the microflora Candida albicans is a major fungal pathogen of humans. This yeast of the skin, oral cavity, and gastrointestinal and urogenital tracts of is carried by many individuals as a harmless commensal, but when most healthy individuals (Odds, 1988; Calderone, 2002; Calderone immune defences are perturbed it causes mucosal infections and Clancy, 2012). However, C. albicans frequently causes oral and (thrush). Additionally, when the immune system becomes severely vaginal infections (thrush) when the microflora is disturbed by compromised, C. albicans often causes life-threatening systemic antibiotic usage or when immune defences are perturbed, for infections. A battery of virulence factors and fitness attributes promote example in HIV patients (Sobel, 2007; Revankar and Sobel, 2012). the pathogenicity of C. albicans. Fitness attributes include robust In individuals whose immune systems are severely compromised responses to local environmental stresses, the inactivation of which (such as neutropenic patients undergoing chemotherapy or transplant attenuates virulence. Stress signalling pathways in C. albicans surgery), the fungus can survive in the bloodstream, leading to the include evolutionarily conserved modules. However, there has been colonisation of internal organs such as the kidney, liver, spleen and rewiring of some stress regulatory circuitry such that the roles of a brain (Pfaller and Diekema, 2007; Calderone and Clancy, 2012). -
Diversity of the Cryptococcus Neoformans-Cryptococcus Gattii Species Complex Marjan Bovers1, Ferry Hagen1 and Teun Boekhout1,2
S4 Rev Iberoam Micol 2008; 25: S4-S12 Review Diversity of the Cryptococcus neoformans-Cryptococcus gattii species complex Marjan Bovers1, Ferry Hagen1 and Teun Boekhout1,2 1Yeast Research Group, CBS Fungal Diversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Department of Internal Medicine and Infectious Diseases, University Medical Centre Utrecht, The Netherlands Summary More than 110 years of study of the Cryptococcus neoformans and Cryptococcus gattii species complex has resulted in an enormous accumulation of fundamental, applied biological and clinical knowledge. Recent developments in our understanding of the diversity within the species complex are presented, emphasizing the intraspecific complexity, which includes species, microspecies, hybrids, serotypes and genotypes. Each of these may have different roles in disease. An overview of obsolete and current names is presented. Key words Cryptococcus neoformans, Cryptococcus gattii, Yeast, Taxonomy, Pathogen. Diversidad del complejo de especies Cryptococcus neoformans-Cryptococcus gattii Resumen Más de 110 años de estudio sobre el complejo de especies Cryptococcus neoformans y Cryptococcus gattii han dado lugar a un gran acúmulo de conocimiento básico, aplicado y clínico. En este artículo se describen los avances recientes en la comprensión de su diversidad, haciendo énfasis en la complejidad intraespecífica que presenta y que llega a englobar especies, microespecies, híbridos, serotipos y genotipos. Cada uno de estos grupos puede jugar un papel diferente en la enfermedad. Se presenta también una visión global de los nombres obsoletos y actuales de estos taxones. Palabras clave Cryptococcus neoformans, Cryptococcus gattii, Levaduras, Patógeno, Taxonomía. Introduction racteristics of the genus Saccharomyces were not present, he placed these species in the genus Cryptococcus [166]. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
Cryptococcus Gattii Outbreak
The recent Cryptococcus gattii outbreak A deadly pathway… From Trees to Lungs to Brain ryptococcus gattii disease. The route of C has been in the infection is from breathing the news lately, due to a recent airborne organism, which outbreak in the Pacific becomes lodged in the Northwest. This new, more pulmonary tissues. virulent strain is expected to by Jay Hardy, CLS, SM (NRCM) spread further throughout the Symptoms Northwest and Northern California in the coming The pulmonary disease, Jay Hardy is the founder and months. known as cpryptococcosis, president of Hardy Diagnostics. develops slowly. After He began his career in exposure it can take two to microbiology as a Medical Technologist in Santa Barbara, twelve months for symptoms California. to appear, with the usual onset In 1980, he began at six or seven months. manufacturing culture media for the local hospitals. Today, The symptoms include: Hardy Diagnostics is the third largest media manufacturer in the U.S. • Cough that lasts weeks or months To ensure rapid and reliable turn around time, Hardy • Sharp chest pain Figure 1: An India ink stain Diagnostics maintains six • Unexplained shortness of showing the capsule surrounding distribution centers, and breath produces over 3,000 products the C. gattii cells in the yeast form used in clinical and industrial at 1,000X. Photo from Haley/CDC. • Severe headache microbiology laboratories • Confusion throughout the world. The organism is a fungus that • Fever is usually found in the soil • Night sweats www.HardyDiagnostics.com and on trees. It is not spread • Unintended weight loss from human to human or animal to human. -
Epidemiology and Geographic Distribution of Blastomycosis, Histoplasmosis, and Coccidioidomycosis, Ontario, Canada, 1990–2015 Elizabeth M
Epidemiology and Geographic Distribution of Blastomycosis, Histoplasmosis, and Coccidioidomycosis, Ontario, Canada, 1990–2015 Elizabeth M. Brown,1 Lisa R. McTaggart,1 Deirdre Dunn, Elizabeth Pszczolko, Kar George Tsui, Shaun K. Morris, Derek Stephens, Julianne V. Kus,2 Susan E. Richardson2 In support of improving patient care, this activity has been planned and implemented by Medscape, LLC and Emerging Infectious Diseases. Medscape, LLC is jointly accredited by the Accreditation Council for Continuing Medical Education (ACCME), the Accreditation Council for Pharmacy Education (ACPE), and the American Nurses Credentialing Center (ANCC), to provide continuing education for the healthcare team. Medscape, LLC designates this Journal-based CME activity for a maximum of 1.00 AMA PRA Category 1 Credit(s)™. Physicians should claim only the credit commensurate with the extent of their participation in the activity. All other clinicians completing this activity will be issued a certificate of participation. To participate in this journal CME activity: (1) review the learning objectives and author disclosures; (2) study the education content; (3) take the post-test with a 75% minimum passing score and complete the evaluation at http://www.medscape.org/journal/eid; and (4) view/print certificate. For CME questions, see page 1400. Release date: June 15, 2018; Expiration date: June 15, 2019 Learning Objectives Upon completion of this activity, participants will be able to: • Describe the epidemiology and geographic distribution of microbiology laboratory-confirmed -
Mucormycosis of the Central Nervous System
Journal of Fungi Review Mucormycosis of the Central Nervous System 1 1,2, , 3, , Amanda Chikley , Ronen Ben-Ami * y and Dimitrios P Kontoyiannis * y 1 Infectious Diseases Unit, Tel Aviv Sourasky Medical Center, Tel Aviv 64239, Israel 2 Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 64239, Israel 3 Department of Infectious Diseases, The University of Texas, M.D. Anderson Cancer Center, Houston, TX 77030, USA * Correspondence: [email protected] (R.B.-A.); [email protected] (D.P.K.) These authors contribute equally to this paper. y Received: 6 June 2019; Accepted: 7 July 2019; Published: 8 July 2019 Abstract: Mucormycosis involves the central nervous system by direct extension from infected paranasal sinuses or hematogenous dissemination from the lungs. Incidence rates of this rare disease seem to be rising, with a shift from the rhino-orbital-cerebral syndrome typical of patients with diabetes mellitus and ketoacidosis, to disseminated disease in patients with hematological malignancies. We present our current understanding of the pathobiology, clinical features, and diagnostic and treatment strategies of cerebral mucormycosis. Despite advances in imaging and the availability of novel drugs, cerebral mucormycosis continues to be associated with high rates of death and disability. Emerging molecular diagnostics, advances in experimental systems and the establishment of large patient registries are key components of ongoing efforts to provide a timely diagnosis and effective treatment to patients with cerebral mucormycosis. Keywords: central nervous system; mucormycosis; Mucorales; zygomycosis 1. Introduction Mucormycosis is the second most frequent invasive mold disease after aspergillosis [1–3], with rising incidence reported in some countries [4–7]. -
Trichosporon Beigelii Infection Presenting As White Piedra and Onychomycosis in the Same Patient
Trichosporon beigelii Infection Presenting as White Piedra and Onychomycosis in the Same Patient Lt Col Kathleen B. Elmer, USAF; COL Dirk M. Elston, MC, USA; COL Lester F. Libow, MC, USA Trichosporon beigelii is a fungal organism that causes white piedra and has occasionally been implicated as a nail pathogen. We describe a patient with both hair and nail changes associated with T beigelii. richosporon beigelii is a basidiomycetous yeast, phylogenetically similar to Cryptococcus.1 T T beigelii has been found on a variety of mammals and is present in soil, water, decaying plants, and animals.2 T beigelii is known to colonize normal human skin, as well as the respiratory, gas- trointestinal, and urinary tracts.3 It is the causative agent of white piedra, a superficial fungal infection of the hair shaft and also has been described as a rare cause of onychomycosis.4 T beigelii can cause endo- carditis and septicemia in immunocompromised hosts.5 We describe a healthy patient with both white piedra and T beigelii–induced onychomycosis. Case Report A 62-year-old healthy man who worked as a pool maintenance employee was evaluated for thickened, discolored thumb nails (Figure 1). He had been aware of progressive brown-to-black discoloration of the involved nails for 8 months. In addition, soft, light yellow-brown nodules were noted along the shafts of several axillary hairs (Figure 2). Microscopic analysis of the hairs revealed nodal concretions along the shafts (Figure 3). No pubic, scalp, eyebrow, eyelash, Figure 1. Onychomycotic thumb nail. or beard hair involvement was present. Cultures of thumb nail clippings on Sabouraud dextrose agar grew T beigelii and Candida parapsilosis.