A Three-Dimensional Niche Comparison of Emiliania Huxleyi and Gephyrocapsa Oceanica: Reconciling Observations with Projections
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Novel Interactions Between Phytoplankton and Microzooplankton: Their Influence on the Coupling Between Growth and Grazing Rates in the Sea
Hydrobiologia 480: 41–54, 2002. 41 C.E. Lee, S. Strom & J. Yen (eds), Progress in Zooplankton Biology: Ecology, Systematics, and Behavior. © 2002 Kluwer Academic Publishers. Printed in the Netherlands. Novel interactions between phytoplankton and microzooplankton: their influence on the coupling between growth and grazing rates in the sea Suzanne Strom Shannon Point Marine Center, Western Washington University, 1900 Shannon Point Rd., Anacortes, WA 98221, U.S.A. Tel: 360-293-2188. E-mail: [email protected] Key words: phytoplankton, microzooplankton, grazing, stability, behavior, evolution Abstract Understanding the processes that regulate phytoplankton biomass and growth rate remains one of the central issues for biological oceanography. While the role of resources in phytoplankton regulation (‘bottom up’ control) has been explored extensively, the role of grazing (‘top down’ control) is less well understood. This paper seeks to apply the approach pioneered by Frost and others, i.e. exploring consequences of individual grazer behavior for whole ecosystems, to questions about microzooplankton–phytoplankton interactions. Given the diversity and paucity of phytoplankton prey in much of the sea, there should be strong pressure for microzooplankton, the primary grazers of most phytoplankton, to evolve strategies that maximize prey encounter and utilization while allowing for survival in times of scarcity. These strategies include higher grazing rates on faster-growing phytoplankton cells, the direct use of light for enhancement of protist digestion rates, nutritional plasticity, rapid population growth combined with formation of resting stages, and defenses against predatory zooplankton. Most of these phenomena should increase community-level coupling (i.e. the degree of instantaneous and time-dependent similarity) between rates of phytoplankton growth and microzooplankton grazing, tending to stabilize planktonic ecosystems. -
Ecology of Oceanic Coccolithophores. I. Nutritional Preferences of the Two Stages in the Life Cycle of Coccolithus Braarudii and Calcidiscus Leptoporus
AQUATIC MICROBIAL ECOLOGY Vol. 44: 291–301, 2006 Published October 10 Aquat Microb Ecol Ecology of oceanic coccolithophores. I. Nutritional preferences of the two stages in the life cycle of Coccolithus braarudii and Calcidiscus leptoporus Aude Houdan, Ian Probert, Céline Zatylny, Benoît Véron*, Chantal Billard Laboratoire de Biologie et Biotechnologies Marines, Université de Caen Basse-Normandie, Esplanade de la Paix, 14032 Caen Cedex, France ABSTRACT: Coccolithus braarudii and Calcidiscus leptoporus are 2 coccolithophores (Prymnesio- phyceae: Haptophyta) known to possess a complex heteromorphic life cycle, with alternation between a motile holococcolith-bearing haploid stage and a non-motile heterococcolith-bearing diploid stage. The ecological implications of this type of life cycle in coccolithophores are currently poorly known. The nutritional preferences of each stage of both species, and their growth response to conditions of turbulence were investigated by varying their growth conditions. Of the different cul- ture media tested, only the synthetic seawater medium did not support the growth of both stages of C. braarudii and C. leptoporus. With natural seawater-based media, the growth rate of the haploid phase of both coccolithophores was stimulated by the addition of soil extract (K/2: 0.23 ± 0.02 d–1 and K/2 with soil extract 0.35 ± 0.01 d–1 for the C. braarudii haploid stage), while the diploid phase was not, indicating that the motile stage is capable of utilizing compounds present in soil extract or ingest- ing bacteria that are activated in enriched media. The addition of sodium acetate to the medium also stimulated the haploid phase of C. -
University of Oklahoma
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D. -
An Explanation for the 18O Excess in Noelaerhabdaceae Coccolith Calcite
Available online at www.sciencedirect.com ScienceDirect Geochimica et Cosmochimica Acta 189 (2016) 132–142 www.elsevier.com/locate/gca An explanation for the 18O excess in Noelaerhabdaceae coccolith calcite M. Hermoso a,⇑, F. Minoletti b,c, G. Aloisi d,e, M. Bonifacie f, H.L.O. McClelland a,1, N. Labourdette b,c, P. Renforth g, C. Chaduteau f, R.E.M. Rickaby a a University of Oxford – Department of Earth Sciences, South Parks Road, Oxford OX1 3AN, United Kingdom b Sorbonne Universite´s, UPMC Universite´ Paris 06 – Institut de Sciences de la Terre de Paris (ISTeP), 4 Place Jussieu, 75252 Paris Cedex 05, France c CNRS – UMR 7193 ISTeP, 4 Place Jussieu, 75252 Paris Cedex 05, France d Sorbonne Universite´s, UPMC Universite´ Paris 06 – UMR 7159 LOCEAN, 4 Place Jussieu, 75005 Paris, France e CNRS – UMR 7159 LOCEAN, 4 Place Jussieu, 75005 Paris, France f Institut de Physique du Globe de Paris, Sorbonne Paris Cite´, Universite´ Paris-Diderot, UMR CNRS 7154, 1 rue Jussieu, 75238 Paris Cedex, France g Cardiff University – School of Earth and Ocean Sciences, Parks Place, Cardiff CF10 3AT, United Kingdom Received 10 November 2015; accepted in revised form 11 June 2016; available online 18 June 2016 Abstract Coccoliths have dominated the sedimentary archive in the pelagic environment since the Jurassic. The biominerals pro- duced by the coccolithophores are ideally placed to infer sea surface temperatures from their oxygen isotopic composition, as calcification in this photosynthetic algal group only occurs in the sunlit surface waters. In the present study, we dissect the isotopic mechanisms contributing to the ‘‘vital effect”, which overprints the oceanic temperatures recorded in coccolith calcite. -
Investigation of Cell Growth and Chlorophyll a Content of The
ssing oce & pr B o io i t B e c Hariskos et al., J Bioprocess Biotech 2015, 5:6 f h o n l i a q DOI: 10.4172/2155-9821.1000234 n u r e u s o J Journal of Bioprocessing & Biotechniques ISSN: 2155-9821 Research Article Open Access Investigation of Cell Growth and Chlorophyll a Content of the Coccolithophorid Alga Emiliania huxleyi by Using Simple Bench-Top Flow Cytometry Ioanna Hariskos*, Tobias Rubner and Clemens Posten Institute of Process Engineering in Life Sciences, Karlsruhe Institute of Technology, Germany Abstract The coccolithophorid alga Emiliania huxleyi produces micro-structured calcite particles, which are called coccoliths. Due to their unique and sophisticated structure, coccoliths are highly promising for different industrial applications, such as paper manufacturing, color and lacquer preparation. The mass production of coccoliths requires the evaluation of optimum cultivation conditions. This study investigates the impact of varying irradiance (10-1500 μmol m-² s-1) on growth and chlorophyll a content of two calcifying strains CCMP371 and RCC1216 as well as on the non-calcifying strain RCC1217 (haploid form of RCC1217). The light kinetics contradicts the popular opinion, that E. huxleyi is an extraordinarily light tolerating alga in general. Photoinhibition was already observed at irradiance >500 µmol m-2 s-1 in the case of the calcifying strains. Furthermore, light requirements to grow at maximum growth rate, as well as thresholds towards photoinhibition were considerably different between calcifying and non-calcifying strains. The haplont required significantly higher irradiance to reach maximum -2 -1 µspec (>200 µmol m s ), while being much more tolerant to towards photoinhibition, which occurred not until 800 µmol m-2 s-1. -
Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting
NOTICE This report was prepared as an account of work sponsored by the United States Government. Neither the United States nor the United States Department of Energy, nor any of their employees, nor any of their contractors, subcontractors, or their employees, makes any warranty, expressed or implied, or assumes any legai liability or responsibility for the accuracy, completeness or usefulness of any information, apparatus, product or process disclosed, or represents that its use would not infringe privately owned rights. Printed in the United States of America Available from: National Technical Information Service U.S. Departmenr of Commerce 5285 Port Royal Road Springfield, VA 221 61 Price: Microfiche A01 Printed Copy A1 6 Codes are ~sedfor pricing ail publications. The code is determined by the number of pages in the publication. lnformation pertaining to the pricing codes can be found in the current issue of the following publications, which are generally available in most tibraries; Energy Research Abstracts. (ERA); Government Reports Announcements and Index (GRA and I); Scientific and Technical Abstract Reports (STAR;; and publication. NTIS-PR-360 available from NT1S at the above address. SER IICP-231-2700 UC Category: 61c DE85Ol2137 Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting 20 - 21 March 1985 Golden, CO June 1985 Prepared under Task No. 4513.10 FTP No. 513 Solar Energy Research Institute A Division of Midwest Research Institute 1617 Cole Boulevard Golden, Colorado 80401 Prepared for the U.S. Department of Energy Contract No. DE-AC02-83CH10093 PREFACE This volume contains progress reports presented by the Aquatic Species Program subcontractors and SERl researchers at the SERl Aquatic Species Review held at SERI, March 20 and 2 1, 1985. -
The Revised Classification of Eukaryotes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/231610049 The Revised Classification of Eukaryotes Article in Journal of Eukaryotic Microbiology · September 2012 DOI: 10.1111/j.1550-7408.2012.00644.x · Source: PubMed CITATIONS READS 961 2,825 25 authors, including: Sina M Adl Alastair Simpson University of Saskatchewan Dalhousie University 118 PUBLICATIONS 8,522 CITATIONS 264 PUBLICATIONS 10,739 CITATIONS SEE PROFILE SEE PROFILE Christopher E Lane David Bass University of Rhode Island Natural History Museum, London 82 PUBLICATIONS 6,233 CITATIONS 464 PUBLICATIONS 7,765 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Biodiversity and ecology of soil taste amoeba View project Predator control of diversity View project All content following this page was uploaded by Smirnov Alexey on 25 October 2017. The user has requested enhancement of the downloaded file. The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D. -
The Scale and Evolutionary Significance of Horizontal Gene
Yue et al. BMC Genomics 2013, 14:729 http://www.biomedcentral.com/1471-2164/14/729 RESEARCH ARTICLE Open Access The scale and evolutionary significance of horizontal gene transfer in the choanoflagellate Monosiga brevicollis Jipei Yue1,3†, Guiling Sun2,3†, Xiangyang Hu1 and Jinling Huang3* Abstract Background: It is generally agreed that horizontal gene transfer (HGT) is common in phagotrophic protists. However, the overall scale of HGT and the cumulative impact of acquired genes on the evolution of these organisms remain largely unknown. Results: Choanoflagellates are phagotrophs and the closest living relatives of animals. In this study, we performed phylogenomic analyses to investigate the scale of HGT and the evolutionary importance of horizontally acquired genes in the choanoflagellate Monosiga brevicollis. Our analyses identified 405 genes that are likely derived from algae and prokaryotes, accounting for approximately 4.4% of the Monosiga nuclear genome. Many of the horizontally acquired genes identified in Monosiga were probably acquired from food sources, rather than by endosymbiotic gene transfer (EGT) from obsolete endosymbionts or plastids. Of 193 genes identified in our analyses with functional information, 84 (43.5%) are involved in carbohydrate or amino acid metabolism, and 45 (23.3%) are transporters and/or involved in response to oxidative, osmotic, antibiotic, or heavy metal stresses. Some identified genes may also participate in biosynthesis of important metabolites such as vitamins C and K12, porphyrins and phospholipids. Conclusions: Our results suggest that HGT is frequent in Monosiga brevicollis and might have contributed substantially to its adaptation and evolution. This finding also highlights the importance of HGT in the genome and organismal evolution of phagotrophic eukaryotes. -
Is Coccolithophore Distribution in the Mediterranean Sea Related to Seawater Carbonate Chemistry? A
Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Ocean Sci. Discuss., 11, 613–653, 2014 Open Access www.ocean-sci-discuss.net/11/613/2014/ Ocean Science doi:10.5194/osd-11-613-2014 Discussions © Author(s) 2014. CC Attribution 3.0 License. This discussion paper is/has been under review for the journal Ocean Science (OS). Please refer to the corresponding final paper in OS if available. Is coccolithophore distribution in the Mediterranean Sea related to seawater carbonate chemistry? A. M. Oviedo1, P. Ziveri1,2, M. Álvarez3, and T. Tanhua4 1Institute of Environmental Science and Technology (ICTA), Universitat Autonoma de Barcelona (UAB), 08193 Bellaterra, Spain 2Earth & Climate Cluster, Department of Earth Sciences, FALW, Vrije Universiteit Amsterdam, FALW, HV1081 Amsterdam, the Netherlands 3IEO – Instituto Espanol de Oceanografia, Apd. 130, A Coruna, 15001, Spain 4GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Marine Biogeochemistry, Duesternbrooker Weg 20, 24105 Kiel, Germany Received: 31 December 2013 – Accepted: 15 January 2014 – Published: 20 February 2014 Correspondence to: A. M. Oviedo ([email protected]) Published by Copernicus Publications on behalf of the European Geosciences Union. 613 Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Abstract The Mediterranean Sea is considered a “hot-spot” for climate change, being char- acterized by oligotrophic to ultra-oligotrophic waters and rapidly changing carbonate chemistry. Coccolithophores are considered a dominant phytoplankton group in these 5 waters. As a marine calcifying organism they are expected to respond to the ongo- ing changes in seawater CO2 systems parameters. However, very few studies have covered the entire Mediterranean physiochemical gradients from the Strait of Gibral- tar to the Eastern Mediterranean Levantine Basin. -
Literature Review of the Microalga Prymnesium Parvum and Its Associated Toxicity
Literature Review of the Microalga Prymnesium parvum and its Associated Toxicity Sean Watson, Texas Parks and Wildlife Department, August 2001 Introduction Recent large-scale fish kills associated with the golden-alga, Prymnesium parvum, have imposed monetary and ecological losses on the state of Texas. This phytoflagellate has been implicated in fish kills around the world since the 1930’s (Reichenbach-Klinke 1973). Kills due to P. parvum blooms are normally accompanied by water with a golden-yellow coloration that foams in riffles (Rhodes and Hubbs 1992). The factors responsible for the appearance of toxic P. parvum blooms have yet to be determined. The purpose of this paper is to present a review of the work by those around the globe whom have worked with Prymnesium parvum in an attempt to better understand the biology and ecology of this organism as well as its associated toxicity. I will concentrate on the relevant biology important in the ecology and identification of this organism, its occurrence, nutritional requirements, factors governing its toxicity, and methods used to control toxic blooms with which it is associated. Background Biology and Diagnostic Features Prymnesium parvum is a microalga in the class Prymnesiophyceae, order Prymnesiales and family Prymnesiaceae, and is a common member of the marine phytoplankton (Bold and Wynne 1985, Larsen 1999, Lee 1980). It is a uninucleate, unicellular flagellate with an ellipsoid or narrowly oval cell shape (Lee 1980, Prescott 1968). Green, Hibberd and Pienaar (1982) reported that the cells range from 8-11 micrometers long and 4-6 micrometers wide. The authors also noted that the cells are PWD RP T3200-1158 (8/01) 2 Lit. -
PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), a NEW TOXIC SPECIES from the MEDITERRANEAN SEA J Fresnel, I
PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), A NEW TOXIC SPECIES FROM THE MEDITERRANEAN SEA J Fresnel, I. Probert, C. Billard To cite this version: J Fresnel, I. Probert, C. Billard. PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIO- PHYCEAE), A NEW TOXIC SPECIES FROM THE MEDITERRANEAN SEA. Vie et Milieu / Life & Environment, Observatoire Océanologique - Laboratoire Arago, 2001, pp.89-97. hal-03192104 HAL Id: hal-03192104 https://hal.sorbonne-universite.fr/hal-03192104 Submitted on 7 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. VIE ET MILIEU, 2001, 51 (1-2) : 89-97 PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), A NEW TOXIC SPECIES FROM THE MEDITERRANEAN SEA /. FRESNEL, I. PROBERT, C. BILLARD Laboratoire de Biologie et Biotechnologies Marines, Université de Caen, Esplanade de la Paix, 14032 Caen Cedex, France PRYMNESIUM FAVEOLATUM SP. NOV. ABSTRACT. - A new marine species of Prymnesium is described based on cultu- PRYMNESIOPHYCEAE red material originating from a sublittoral sample collected on the eastern French SCALES Mediterranean coast. Prymnesium faveolatum sp. nov. exhibits typical generic cha- ULTRASTRUCTURE TOXICITY racters in terms of cell morphometry, swimming mode and organelle arrangement. MEDITERRANEAN Organic body scales, présent in several proximal layers, have a narrow inflexed rim and are ornamented with a variably developed cross. -
Emerging Interaction Patterns in the Emiliania Huxleyi-Ehv System
viruses Article Emerging Interaction Patterns in the Emiliania huxleyi-EhV System Eliana Ruiz 1,*, Monique Oosterhof 1,2, Ruth-Anne Sandaa 1, Aud Larsen 1,3 and António Pagarete 1 1 Department of Biology, University of Bergen, Bergen 5006, Norway; [email protected] (R.-A.S.); [email protected] (A.P.) 2 NRL for fish, Shellfish and Crustacean Diseases, Central Veterinary Institute of Wageningen UR, Lelystad 8221 RA, The Nederlands; [email protected] 3 Uni Research Environment, Nygårdsgaten 112, Bergen 5008, Norway; [email protected] * Correspondence: [email protected]; Tel.: +47-5558-8194 Academic Editors: Mathias Middelboe and Corina Brussaard Received: 30 January 2017; Accepted: 16 March 2017; Published: 22 March 2017 Abstract: Viruses are thought to be fundamental in driving microbial diversity in the oceanic planktonic realm. That role and associated emerging infection patterns remain particularly elusive for eukaryotic phytoplankton and their viruses. Here we used a vast number of strains from the model system Emiliania huxleyi/Emiliania huxleyi Virus to quantify parameters such as growth rate (µ), resistance (R), and viral production (Vp) capacities. Algal and viral abundances were monitored by flow cytometry during 72-h incubation experiments. The results pointed out higher viral production capacity in generalist EhV strains, and the virus-host infection network showed a strong co-evolution pattern between E. huxleyi and EhV populations. The existence of a trade-off between resistance and growth capacities was not confirmed. Keywords: Phycodnaviridae; Coccolithovirus; Coccolithophore; Haptophyta; Killing-the-winner; cost of resistance; infectivity trade-offs; algae virus; marine viral ecology; viral-host interactions 1.