AT1G02640 beta−xylosidase 2 (BXL2); FUNCTIONS IN: hydrolase activity, hydrolyzing O−glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant−type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase,
14 ●● ● ●●● ● ● ●● ● ● ● ●
12 ● ● ● ● 10 ● ● ● ● 8 ● ● ● 6 Log2 RMA Expression
● ● ● ● ● ● ● ● ● ● ● ● 4 ● ● ● ●● ●● ● ● ●●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae − 0; Bacteria − 0; Metazoa − 0; Fungi − 0; Plants − 44; Viruses − 0; Other Eukaryotes − 0 (source: NCBI BLink).
● 9 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ●
8 ● ● ●
● ● ● ● ● ● ● ● ● ● 7 ● ● ● ● ● ● ● ● ● Log2 RMA Expression ●● ●● 6 ● ● ●●
●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G05350 NAD(P)−binding Rossmann−fold superfamily protein; FUNCTIONS IN: binding, oxidoreductase activity, acting on the CH−OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant 9
● ● 8 ● ● ● ● ● ● ● ● ● ●● ● ● ● ● ●● ● ●
7 ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● 6 ● ● ● ● ●
Log2 RMA Expression ● ● ● ●● ● ● ●
5 ● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G15210 pleiotropic drug resistance 7 (PDR7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage,
● 10 ● ● ●● ● ● ●● ● ● ● ● ● ● ●●● ● ● ● ●
8 ● ● 6
● ● Log2 RMA Expression
4 ● ● ● ● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●●● ● ●● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G18680 HNH endonuclease domain−containing protein; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: N−terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4
● ● ● ● ●● ● ● 7.0 ●● ● ● ● ●● ● ● ● ● ●
6.5 ● ●
● 6.0 ●● ● ● ● ● ●● ●● ● ● ● ● ●
5.5 ● ● ● ● ● ● ● ● ● ● ●
Log2 RMA Expression ● ● ● ● ● ● 5.0 ● ● ●
● 4.5
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G30120 pyruvate dehydrogenase E1 beta (PDH−E1 BETA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl−transferring) activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plastid pyruvate dehydrogenase complex, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; 10
● 9 ● ● ●●● ● ● ● ● ● ● ● ●● 8 ●● ● ● ● ● ● 7
● ● ● 6 ● ● ● 5 Log2 RMA Expression ● ●● ● ● ● ● ● ● ●● 4 ● ●● ● ● ●● ● ● ● ● ● ● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G43780 serine carboxypeptidase−like 44 (scpl44); FUNCTIONS IN: serine−type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded
● ● ●● ● ●● ● ● ● 12 ● ● ● ●● ● ●● ● ● 10 ●
8 ●
●● ●● ● ● 6 Log2 RMA Expression ● ● 4 ● ● ● ● ● ● ● ● ● ● ●● ●●● ● ● ● ● ● ● ●●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G49580 Calcium−dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N−terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
● ●● ●● 8 ● ● ● ● ● ● ● ● ● ●● ● ● ●● 7 ● ●
6 ● ● ● ● ● ● ● ● ● ● ● ● ●● 5 ● ● ● ● ● ●●
Log2 RMA Expression ● ● 4 ● ● ● ● ● ● ● 3 ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G62570 flavin−monooxygenase glucosinolate S−oxygenase 4 (FMO GS−OX4); CONTAINS InterPro DOMAIN/s: Flavin−containing monooxygenase FMO (InterPro:IPR000960), Flavin−containing monooxygenase−like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin−monooxygenase glucosinolate S−oxygenase
● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ●● 10 ● ● ● ●
●
8 ● ●
● ● 6 ●● ● ● ● Log2 RMA Expression ● ● ●
4 ● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G64970 gamma−tocopherol methyltransferase (G−TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S−adenosyl−L−methionine−dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins
●
10 ● ● ●● ● ● ● ●● ● ● ● ●● ● ●● ● ● ● ● 8
● ● ● ● ● ● ● ● ● ● ●
6 ● ●● ● ● Log2 RMA Expression ● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● 4
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT1G68560 alpha−xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6−alpha−xylosidase activity, xylan 1,4−beta−xylosidase activity, alpha−N−arabinofuranosidase activity, hydrolase activity, hydrolyzing O−glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic 10
8 ● ●● ●
● ● ●● ●●● ● ●● ● ●● 6 ● ● ● ● ● ● ● ● ● ● ● ● ●
Log2 RMA Expression ● ● ● ● ● ● 4 ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ● ● ●● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G01910 ATMAP65−6; CONTAINS InterPro DOMAIN/s: Microtubule−associated protein, MAP65/ASE1−type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule−associated protein 65−7 (TAIR:AT1G14690.2); Has 5922 Blast hits to 4912 proteins in 547 species: Archae − 118; Bacteria − 527;
● ● ● ● ● ●●
7 ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ●●
6 ● ●
●●
5 ● ● ● ● ● ● ●
Log2 RMA Expression ● ● ● ● ● ● ● ● ● ● ● ● ● ● 4 ● ● ● ● ● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G22170 Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase,
● ● ●● ● ● ●● ●● ● ● ●
12 ● ● ● ● ●● ● ● ● ● 10
● ●● 8 ● ● ● ● ● ● ●● ● 6
Log2 RMA Expression ●●
● ● ● ● ●● 4 ● ● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G35780 serine carboxypeptidase−like 26 (scpl26); FUNCTIONS IN: serine−type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase 10
●
9 ● ● ● ● ● ● ●● ● ● ● ●● ● ●● ● ● 8 ● ● ● ●●
7 ● ●
● ●
6 ● ● ● ●● ● ●● ● ● ● ● ●● Log2 RMA Expression 5 ● ●● ● ●● ● 4 ●● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G37120 S1FA−like DNA−binding protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA binding protein S1FA (InterPro:IPR006779); 10
9 ● ● ●● ●● ● ● ● ● ● ● ● 8 ● ● ●● ● ●
7 ● ● ● ● ● ● ● 6 ● ● ● ● ● Log2 RMA Expression
5 ● ● ● ● ●● ● ● ● ● ●● ● ● ●
4 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G38700 mevalonate diphosphate decarboxylase 1 (MVD1); CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2−type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2−type fold, subgroup (InterPro:IPR014721);
9 ● ● ● ●● ● ● ● ● ● ● ●
8 ● ● ● ● ●● ● ● ● ● ● ● 7
● ● ● ● 6 ● ● ● 5
● Log2 RMA Expression ● ● ● ● ● ● 4 ●● ●● ● ● ● ● ● ●● ● ● ● ● ● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G45180 Bifunctional inhibitor/lipid−transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 12 ● ● ● ● ● ● ● ● ● ● ● ● 10 ● ● ● ● ●● ● ● 8 ●
● ● 6 ● ● ● ● Log2 RMA Expression ●
4 ● ● ● ●● ● ● ● ● ● ● ● ●● ● ● ● ● ● ● ●● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G45830 downstream target of AGL15 2 (DTA2); CONTAINS InterPro DOMAIN/s: Lipopolysaccharide−modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10−like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function
8 ● ● ● ●● ● ● ● ● ● ● ● ●● 7 ● ● ● ● ● ● ● ●● ● ● ● ● 6
● ● ● ● 5 ● ● ● ● Log2 RMA Expression ● 4 ● ● ● ● ● ● ●● ● ●● ● ● ● ● ● ● ●● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae − 0; Bacteria − 0; Metazoa − 0;
● ● ●● ● 10.0 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
●
9.5 ●
● ● ● ● ● ● ● 9.0 ● ● ● ● ● ● ● ●● ● ● ● ● ● ● ● Log2 RMA Expression ● ● ● ● 8.5 ● ● ● ● ● ● 8.0
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT2G47690 NADH−ubiquinone oxidoreductase−related; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, iron−sulphur subunit 5 (InterPro:IPR019342); BEST Arabidopsis thaliana protein match is: NADH−ubiquinone oxidoreductase−related (TAIR:AT3G62790.1); Has 131 Blast hits to 131 proteins in 64 species: 8
● ● ●● ● ● ●● ● ● ●● 7 ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ●●
6 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● 5 Log2 RMA Expression ● ● ● ● ●● ●
● ● ● 4
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G01690 alpha/beta−Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold−1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta−Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3903 Blast hits to 3890 proteins in 823 species: Archae − 8;
9 ● ● ● ●● ● ● ●● ●● ● ● ●● ● ● ●
8 ● ● ● ● ● ● ● 7
● ● ●
● ● 6 ● ● ● ● ● ●● ● ● ● ●
Log2 RMA Expression ● ● 5 ● ● ●●● ● ● ● ● ● ● 4
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G10940 dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
● 8 ● ●● ● ●● ● ●● ● ● ● ● ● ● ● ●● 7 ● ● ● ● ● ● ● ●● ●● ● ● ● ● ● 6 ● ● ● ●● ● ● ● 5 ● ● ● ●● ● ● Log2 RMA Expression ● ● ● ● ● ● ● 4
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G11945 homogentisate prenyltransferase (HST); FUNCTIONS IN: homogentisate geranylgeranyltransferase activity, homogentisate farnesyltransferase activity, dimethylallyltranstransferase activity, homogentisate solanesyltransferase activity; INVOLVED IN: carotenoid biosynthetic process, plastoquinone 8.0
●
7.5 ● ● ● ●● ● ● ● ● ● ●● ● ● ● ● ● ●● 7.0 ● ●● ● ● ● ● ● ● ● ● ● ● ● 6.5 ● ● ●● ● ● ● ● ●●
6.0 ● Log2 RMA Expression ● ● ● ● ● ● ● ● ● ●●
5.5 ● ● ● ● ● ● 5.0
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G13760 Cysteine/Histidine−rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: membrane; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD−type (InterPro:IPR001965), C1−like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match 9
● ●● ● ●● ● ●● ● ● ● ● ● 8 ● ● ● ● ● ● ● ● ● 7 ●
● 6 ●
● 5
● ●● 4 Log2 RMA Expression ● ● ● ● ● ● ● ●● ● ● 3 ● ● ● ● ● ● ● ●● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G17100 sequence−specific DNA binding transcription factors; FUNCTIONS IN: sequence−specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
● ● ● ● ● 8 ● ● ● ● ● ● ● ● ● ● ● 7 ●
● ● 6 ●● ● ● ● ● ● 5 ● ● ● ● ● ● Log2 RMA Expression ● 4 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ●● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G20390 endoribonuclease L−PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s:
● ● ● ● ●● ● ● ● ● ● ● 10 ● ●● ● ● ● ● ● ● ●● ● ●
9 ●
8 ● ● ● ● ● ● ● ●●
7 ● ● ● ● ● ● ● ● ● 6 ● ● ● Log2 RMA Expression ● ● ●● ● ●●● ●
5 ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G22200 POLLEN−PISTIL INCOMPATIBILITY 2 (POP2); FUNCTIONS IN: 4−aminobutyrate:pyruvate transaminase activity, cobalt ion binding, 4−aminobutyrate transaminase activity, zinc ion binding; INVOLVED IN: in 11 processes; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 28 plant structures; 11 ● ● ● ● ●●● ● ● ● ● ● ● ●●
10 ●● ● ●● ● ● ●● ● ● ● ●● ● ●● 9 ● ●●● ● ● ● ●● ● ● ● ● ● ● ● ● ● ● 8 ● ● ● ● ●
Log2 RMA Expression ● ● 7
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G47010 Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O−glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside 9 ● ● ● ● ●● ● ● ● ● ● ● ● 8 ● ●● ● ● ●
●
7 ●
● 6 ●● ● ● ●
5 ● ● ● ●
Log2 RMA Expression ● ● ● ●● ● ● ● ● ● ● ●● ● ● 4 ● ● ●● ● ●● ●● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G53610 RAB GTPase homolog 8 (RAB8); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small 9
● ● ● ●● ● ● ●● ●● ● ● 8 ● ● ● ● ● ● ● ● ● ● ● ●
7 ● ●
● ● ● ● ●● ● ● ● 6 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● Log2 RMA Expression 5
● 4
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G57630 exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF, extracellular (InterPro:IPR013111), Exostosin−like (InterPro:IPR004263), EGF−like
● ● ● ●● ● ●● ●● ●
9 ● ● ●● ● ● ●● ● ●● 8 ● ● ● ● ● 7 ●
● ● ● ● 6 ● ● ● ● ● ●● ● ● ● ●
5 ●●
Log2 RMA Expression ● ● 4 ● ● ● ● ● ● ● ●
3 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT3G61580 Fatty acid/sphingolipid desaturase; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase
● ● 9 ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ●
8 ●
● 7
6 ● ● ● ● ● ● ● ●●
5 ● ● ● ● ● ● ● ● ● Log2 RMA Expression ● ●● ● ● ● ● ● ● ● 4 ● ● ● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G02580 NADH−ubiquinone oxidoreductase 24 kDa subunit, putative; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: response to oxidative stress, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain
●
11.0 ● ●● ● ●● ● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ●
10.0 ● ● ● ● ● ● 9.5 ●● ● ● ● ● ● ● ●
9.0 ● ● ● ● ● ● ● ● ● ● ●● ● Log2 RMA Expression 8.5 ● 8.0 7.5
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G11380 Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle−mediated transport, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages;
9.5 ● ● ● ● ● ●● ● 9.0 ●● ● ● ● ● ● ● ●● ● ● ● ●● ●
8.5 ● ● ●● ● ● ● ●
8.0 ● ●● ● ● ● ● 7.5 ● ● ● ● ● ● ● ● ● ● ●
7.0 ● Log2 RMA Expression ●
● 6.5 6.0
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G19120 early−responsive to dehydration 3 (ERD3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S−adenosyl−L−methionine−dependent methyltransferases superfamily protein
● ● 10 ● ● ● ●● ● ● ● ● 9 ● ● ● ●● ●● ● ● 8 ● 7
● ● 6 ● ● ●● Log2 RMA Expression ● ● 5 ● ● ● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
4 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G25080 magnesium−protoporphyrin IX methyltransferase (CHLM); FUNCTIONS IN: magnesium protoporphyrin IX methyltransferase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED 10 9 ● ● ●● ● ●● ● ● ●● ● ●● 8 ● ●
●
7 ● ● ●● ● ●
6 ● ● ● ● ●●● ● Log2 RMA Expression ● ● ● ● 5 ● ● ● ● ● ● ● ● ● ● ● ● ● ● 4 ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G26650 RNA−binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP−1 (InterPro:IPR000504), Nucleotide−binding,
● ● ● ● ●
9 ● ● ● ● ● ● ● ● ●● ● ● ●● ●● ●
● 8 ●
● ● ● ● ● ●● ● ● ● ● ● ● 7 ● ● ●● ● ● ● ● ● ●● ● ● ● ●
6 ● ●
Log2 RMA Expression ● ● ●
● 5
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G29530 Pyridoxal phosphate phosphatase−related protein; FUNCTIONS IN: phosphatase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate 6.5 ●
●
6.0 ● ● ● ● ● ● ● ● ●● ● ● ● ● 5.5 ● ● ● ● ● ●● 5.0 ● ● ● ● 4.5 ● ● ●● ● ● ● 4.0 ● ● Log2 RMA Expression ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ● ● ● ●● 3.5 ● ● ●● ● 3.0
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G31330 Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation
● 10 ●● ● ● ● ● ●● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● 8
● ● ● ● 6
●● Log2 RMA Expression
● ● ● ● ●● ● ● ● ● ● ● ● ●● ●● ●● ● 4 ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G33530 K+ uptake permease 5 (KUP5); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup 8
7 ● ● ● ● ●● ● ● ● ● ●● ● ● ● ● ●● ● ● ● 6 ● ●
● 5 ●● ● ●
●
Log2 RMA Expression ●
4 ● ● ● ●● ● ● ● ● ● ● ● ●● ● ● ● ● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT4G35950 RAC−like 6 (RAC6); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP−binding protein 8
●● 7 ● ●● ●● ● ● ● ●● ● ● ● ● ●● ● ● ● ● ●
6 ●● ● ● ● ● ● ●● ● ● ● ● ● ● ●● ● ● 5 ● ● ● ● ● ● Log2 RMA Expression ● ● ● ● ● ● ● 4 ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G04420 Galactose oxidase/kelch repeat superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta−propeller (InterPro:IPR011043), Kelch
8 ●●● ● ●● ●● ● ● ● ●● ● ●● ● ● ● ●● ● 7 ●●
● ● ●
6 ● ● ● ● ● ●● ● ● ● ● ● ● ● ● ● ●● ● ● ●●
Log2 RMA Expression ● 5 ● ● ● ● ● ● ● ● 4
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G05950 maternal effect embryo arrest 60 (MEE60); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown 9 8
● ●● ● ● 7 ● ● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● 6 ● ●● ● ● ● ● ● ● ●
5 ● Log2 RMA Expression ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● 4 ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae − 0; Bacteria − 0; Metazoa − 736; Fungi − 347; Plants − 385; Viruses − 0; Other Eukaryotes − 339 (source: NCBI BLink).
● ●●
9 ● ● ● ● ● ●● ● ● ● ● ● ●● ●● 8
● 7 ● ● ● 6 ● ● ● 5
Log2 RMA Expression ● ● ● ● 4 ● ● ●● ● ● ● ● ● ● ●● ● ● ● ● ● ● ● ● ● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G14920 Gibberellin−regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis 10 8 ● ● ● ● ●●● ● ● ●● ● ● ● ● ●● ● ● ● ●
6 ● ● ● ●● ● Log2 RMA Expression ● ● ● ● ● ●
4 ● ● ●● ● ● ● ●● ●●● ●● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G20500 Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth 11
●
● ●● ● ● ● ● 10 ● ●●● ● ● ● ● ● ● ● ● ● ● ● ● 9 ● ●
● ● ● ● ● 8 ● ● ● ● ● ● ● ● ● ●●
Log2 RMA Expression ● ● ● ● ● ● ● ● ● 7 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G24150 SQP1; FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698); BEST
● ● ● ● ● ● ● ●● ● ● ● ● 10 ● ● ● ● ● ● 8 ● ● ●
6 ● ● ●● ● ● ● ●●● ● ● Log2 RMA Expression
●● ● ● ● ● ●● ●● ● ● ●
4 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G35360 acetyl Co−enzyme a carboxylase biotin carboxylase subunit (CAC2); FUNCTIONS IN: biotin carboxylase activity, acetyl−CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; 10
● 9 ● ● ●● ●● ● ●● ● ● ● ● 8 ● ● ● ● ● ●● ●
7 ● ● ● ●● ● ● ● ● ● 6 ● ● ● ● ● ● ● ● ● 5 ● ● ● ● ● ● Log2 RMA Expression ●
4 ● ● ● ●● ● ● 3
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G38480 general regulatory factor 3 (GRF3); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 14−3−3
● ● ●● ● ●● 12 ● ● ●● ● ● ● ● ● ● ●● ● ● ● ● ●● ● 11 ●●
● ●●● ●●● 10 ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● Log2 RMA Expression ● ●
9 ● ● ● ● ● ● ● 8
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G42750 BRI1 kinase inhibitor 1 (BKI1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae − 12; Bacteria − 1396; Metazoa − 17338; Fungi − 3422; Plants − 5037; Viruses − 0; Other Eukaryotes − 2996 (source: NCBI BLink).
9 ● ● ● ● ● ● ●● ● ●● ● ●● 8 ● ●●● ● ● ● ● ● ● ●●● 7 6
● ●● ● ● ●
5 ● ● Log2 RMA Expression ● ● ● ● ● ● ● ● ● ●● 4 ● ● ●● ●● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G43830 Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium
● ●●● ● ● ● ● ● ● ●
10 ● ●● ● ● ● ● ● ● ● ● 8 ●
● ● 6 ● ●
Log2 RMA Expression ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●
4 ●● ● ● ● ●●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G45930 magnesium chelatase i2 (CHLI2); FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS 9 8 7
● ● ● ● ● ● ● ●● ●● 6 ● ●● ● ● ●
● ● 5 ● ● ● ● ● ● ● ● 4 Log2 RMA Expression
● ● ● ● ● ● ● ●● ● ● ● ● ● 3 ● ● ● ●● ● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G47760 2−phosphoglycolate phosphatase 2 (PGLP2); FUNCTIONS IN: protein serine/threonine kinase activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
● ● ● ● ● 7 ● ● ●● ● ● ● ● ●● ● ●● ●● ● ●
6 ● ●● ● ● ● ●
● 5 ● ● ● ● Log2 RMA Expression ● ● ● ● ●● ● ● ● ●● ● ● ● ● ●● 4 ●● ● ● ● ● ● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G48300 ADP glucose pyrophosphorylase 1 (ADG1); FUNCTIONS IN: glucose−1−phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28
10 ● ●●● ● ●● ● ● ●● ●● ● ●● ● ● ●● ● ● ● ● ● ● 9 ●
● ●
8 ● ● ● ● ●● ● ● ● ● ● ● 7 ● ● ● ● ● ● ● Log2 RMA Expression ●● ● 6 ● ● ● ●● ● ● 5
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G52840 NADH−ubiquinone oxidoreductase−related; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, respiratory chain complex I, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15
● ●● ●● ● ● ● ●● ● 10.5 ● ● ● ● ● ● ● ●● ● ● ● ● ● ●
10.0 ● ● ● ● ● ● ● ● ● ● ● ● ● 9.5 ● ● ● ● ● ● ● ● ● Log2 RMA Expression ● ●● ● ● ● ● 9.0 ● ● ● ● ● ● ● ● ● 8.5
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G53340 Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages;
9 ● ● ● ● ● ● ● ● ●● ● ● ● ● ●● ● ● ● ● 8 ● ● ● ● ● ● ● ● ● ● ● ● ●
7 ● ● ● ● ●● ● ● ● ● ● ● ● ● ● ● ●
6 ● Log2 RMA Expression ● 5
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G56580 MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein 9
● ● ● ● ● ● ● ● 8 ● ● ● ● ● ● ●● ● ●
7 ●
●
6 ● ● ● ● ● 5
●
Log2 RMA Expression ● ● 4 ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ● ● ● ● 3 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G59130 Subtilase family protein; FUNCTIONS IN: identical protein binding, serine−type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
10 ● ● ● ●● ● ● ● ● ● ● ● ● ● ● 8 ● ● ●● ● ● 6
●
Log2 RMA Expression ● ● 4 ● ● ● ● ● ● ● ● ● ●● ●● ● ●● ● ● ● ●● ● ● ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds AT5G66170 sulfurtransferase 18 (STR18); CONTAINS InterPro DOMAIN/s: Rhodanese−like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1); Has 200 Blast hits to 200 proteins in 47 species: Archae − 2;
● ● ●● ● ● ●●● 12 ●● ● ● ●● ● ● ● ● ● ● ● ● ●
10 ● ● ● ●● 8
● ●● 6 Log2 RMA Expression ● ● ● ●● ● ● ● ● ● ● ● ● ●● ● ● ● ●● ●● ●
4 ●
1 3 7 12 16 20 25 31 38 1 3 7 12 16 20 25 31 38 3 7 12 24 3 7 12 24 Ler
● MCE PE RAD COT Whole ● D ● AR Cvi Dry NILDOG1 NILDOG2 NILDOG3 NILDOG6 Col−0 Dry Col−0 Endosperm Col−0 Embryo Cvi MCE Cvi RAD Whole Seeds