A Homozygous BMPR1B Mutation Causes a New Subtype Of
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The Genetic Basis for Skeletal Diseases
insight review articles The genetic basis for skeletal diseases Elazar Zelzer & Bjorn R. Olsen Harvard Medical School, Department of Cell Biology, 240 Longwood Avenue, Boston, Massachusetts 02115, USA (e-mail: [email protected]) We walk, run, work and play, paying little attention to our bones, their joints and their muscle connections, because the system works. Evolution has refined robust genetic mechanisms for skeletal development and growth that are able to direct the formation of a complex, yet wonderfully adaptable organ system. How is it done? Recent studies of rare genetic diseases have identified many of the critical transcription factors and signalling pathways specifying the normal development of bones, confirming the wisdom of William Harvey when he said: “nature is nowhere accustomed more openly to display her secret mysteries than in cases where she shows traces of her workings apart from the beaten path”. enetic studies of diseases that affect skeletal differentiation to cartilage cells (chondrocytes) or bone cells development and growth are providing (osteoblasts) within the condensations. Subsequent growth invaluable insights into the roles not only of during the organogenesis phase generates cartilage models individual genes, but also of entire (anlagen) of future bones (as in limb bones) or membranous developmental pathways. Different mutations bones (as in the cranial vault) (Fig. 1). The cartilage anlagen Gin the same gene may result in a range of abnormalities, are replaced by bone and marrow in a process called endo- and disease ‘families’ are frequently caused by mutations in chondral ossification. Finally, a process of growth and components of the same pathway. -
Flow Reagents Single Color Antibodies CD Chart
CD CHART CD N° Alternative Name CD N° Alternative Name CD N° Alternative Name Beckman Coulter Clone Beckman Coulter Clone Beckman Coulter Clone T Cells B Cells Granulocytes NK Cells Macrophages/Monocytes Platelets Erythrocytes Stem Cells Dendritic Cells Endothelial Cells Epithelial Cells T Cells B Cells Granulocytes NK Cells Macrophages/Monocytes Platelets Erythrocytes Stem Cells Dendritic Cells Endothelial Cells Epithelial Cells T Cells B Cells Granulocytes NK Cells Macrophages/Monocytes Platelets Erythrocytes Stem Cells Dendritic Cells Endothelial Cells Epithelial Cells CD1a T6, R4, HTA1 Act p n n p n n S l CD99 MIC2 gene product, E2 p p p CD223 LAG-3 (Lymphocyte activation gene 3) Act n Act p n CD1b R1 Act p n n p n n S CD99R restricted CD99 p p CD224 GGT (γ-glutamyl transferase) p p p p p p CD1c R7, M241 Act S n n p n n S l CD100 SEMA4D (semaphorin 4D) p Low p p p n n CD225 Leu13, interferon induced transmembrane protein 1 (IFITM1). p p p p p CD1d R3 Act S n n Low n n S Intest CD101 V7, P126 Act n p n p n n p CD226 DNAM-1, PTA-1 Act n Act Act Act n p n CD1e R2 n n n n S CD102 ICAM-2 (intercellular adhesion molecule-2) p p n p Folli p CD227 MUC1, mucin 1, episialin, PUM, PEM, EMA, DF3, H23 Act p CD2 T11; Tp50; sheep red blood cell (SRBC) receptor; LFA-2 p S n p n n l CD103 HML-1 (human mucosal lymphocytes antigen 1), integrin aE chain S n n n n n n n l CD228 Melanotransferrin (MT), p97 p p CD3 T3, CD3 complex p n n n n n n n n n l CD104 integrin b4 chain; TSP-1180 n n n n n n n p p CD229 Ly9, T-lymphocyte surface antigen p p n p n -
The Role of the TGF- Co-Receptor Endoglin in Cancer
1 The role of the TGF- co-receptor endoglin in cancer Eduardo Pérez-Gómez1,†, Gaelle del Castillo1, Juan Francisco Santibáñez2, Jose Miguel López-Novoa3, Carmelo Bernabéu4 and 1,* Miguel Quintanilla . 1Instituto de Investigaciones Biomédicas Alberto Sols, Consejo Superior de Investigaciones Científicas (CSIC)-Universidad Autónoma de Madrid, 28029-Madrid, Spain; 2Institute for Medical Research, University of Belgrado, Belgrado, Serbia; 3Instituto Reina Sofía de Investigación Nefrológica, Departamento de Fisiología y Farmacología, Universidad de Salamanca, Salamanca, Spain; 4Centro de Investigaciones Biológicas, CSIC, and CIBER de Enfermedades Raras (CIBERER), Madrid, Spain. E-mails: [email protected]; [email protected]; [email protected]; [email protected]; [email protected]; [email protected] † Current address: Departamento de Bioquímica y Biología Molecular I, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain *Corresponding author 2 ABSTRACT Endoglin (CD105) is an auxiliary membrane receptor of transforming growth factor- (TGF-) that interacts with type I and type II TGF- receptors and modulates TGF- signalling. Mutations in endoglin are involved in Hereditary Hemorrhagic Telangiectasia type I, a disorder characterized by cutaneous telangiectasias, epistaxis (nosebleeds) and major arteriovenous shunts, mainly in liver and lung. Endoglin is overexpressed in the tumor-associated vascular endothelium where it modulates angiogenesis. This feature makes endoglin a promising target for antiangiogenic cancer therapy. Recent studies on human and experimental models of carcinogenesis point to an important tumor cell-autonomous role of endoglin by regulating proliferation, migration, invasion and metastasis. These studies suggest that endoglin behaves as a suppressor of malignancy in experimental and human carcinogenesis. In this review, we evaluate the implication of endoglin in tumor development underlying studies developed in our laboratories in recent years. -
Shrna Kinome Screen Identifies TBK1 As a Therapeutic Target for HER2 Breast Cancer
Published OnlineFirst January 31, 2014; DOI: 10.1158/0008-5472.CAN-13-2138 Cancer Tumor and Stem Cell Biology Research shRNA Kinome Screen Identifies TBK1 as a Therapeutic Target for HER2þ Breast Cancer Tao Deng1, Jeff C. Liu1, Philip E.D. Chung1, David Uehling2, Ahmed Aman2, Babu Joseph2, Troy Ketela3, Zhe Jiang1, Nathan F. Schachter4, Robert Rottapel5, Sean E. Egan4, Rima Al-awar2,6, Jason Moffat3, and Eldad Zacksenhaus1 Abstract þ HER2 breast cancer is currently treated with chemotherapy plus anti-HER2 inhibitors. Many patients do not respond or relapse with aggressive metastatic disease. Therefore, there is an urgent need for new therapeutics that þ can target HER2 breast cancer and potentiate the effect of anti-HER2 inhibitors, in particular those that can target tumor-initiating cells (TIC). Here, we show that MMTV-Her2/Neu mammary tumor cells cultured as nonadherent spheres or as adherent monolayer cells select for stabilizing mutations in p53 that "immortalize" the cultures and that, after serial passages, sphere conditions maintain TICs, whereas monolayer cells gradually lose these tumorigenic cells. Using tumorsphere formation as surrogate for TICs, we screened p53-mutant þ Her2/Neu tumorsphere versus monolayer cells with a lentivirus short hairpin RNA kinome library. We identified kinases such as the mitogen-activated protein kinase and the TGFbR protein family, previously implicated þ in HER2 breast cancer, as well as autophagy factor ATG1/ULK1 and the noncanonical IkB kinase (IKK), þ TANK-binding kinase 1 (TBK1), which have not been previously linked to HER2 breast cancer. Knockdown of TBK1 or pharmacologic inhibition of TBK1 and the related protein, IKKe, suppressed growth of both mouse þ and human HER2 breast cancer cells. -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
MECHANISMS in ENDOCRINOLOGY: Novel Genetic Causes of Short Stature
J M Wit and others Genetics of short stature 174:4 R145–R173 Review MECHANISMS IN ENDOCRINOLOGY Novel genetic causes of short stature 1 1 2 2 Jan M Wit , Wilma Oostdijk , Monique Losekoot , Hermine A van Duyvenvoorde , Correspondence Claudia A L Ruivenkamp2 and Sarina G Kant2 should be addressed to J M Wit Departments of 1Paediatrics and 2Clinical Genetics, Leiden University Medical Center, PO Box 9600, 2300 RC Leiden, Email The Netherlands [email protected] Abstract The fast technological development, particularly single nucleotide polymorphism array, array-comparative genomic hybridization, and whole exome sequencing, has led to the discovery of many novel genetic causes of growth failure. In this review we discuss a selection of these, according to a diagnostic classification centred on the epiphyseal growth plate. We successively discuss disorders in hormone signalling, paracrine factors, matrix molecules, intracellular pathways, and fundamental cellular processes, followed by chromosomal aberrations including copy number variants (CNVs) and imprinting disorders associated with short stature. Many novel causes of GH deficiency (GHD) as part of combined pituitary hormone deficiency have been uncovered. The most frequent genetic causes of isolated GHD are GH1 and GHRHR defects, but several novel causes have recently been found, such as GHSR, RNPC3, and IFT172 mutations. Besides well-defined causes of GH insensitivity (GHR, STAT5B, IGFALS, IGF1 defects), disorders of NFkB signalling, STAT3 and IGF2 have recently been discovered. Heterozygous IGF1R defects are a relatively frequent cause of prenatal and postnatal growth retardation. TRHA mutations cause a syndromic form of short stature with elevated T3/T4 ratio. Disorders of signalling of various paracrine factors (FGFs, BMPs, WNTs, PTHrP/IHH, and CNP/NPR2) or genetic defects affecting cartilage extracellular matrix usually cause disproportionate short stature. -
Mutations in C-Natriuretic Peptide (NPPC): a Novel Cause of Autosomal Dominant Short Stature
© American College of Medical Genetics and Genomics ORIGINAL RESEARCH ARTICLE Mutations in C-natriuretic peptide (NPPC): a novel cause of autosomal dominant short stature Alfonso Hisado-Oliva, PhD1,2,3, Alba Ruzafa-Martin, MSc1, Lucia Sentchordi, MD, MSc1,3,4, Mariana F.A. Funari, MSc5, Carolina Bezanilla-López, MD6, Marta Alonso-Bernáldez, MSc1, Jimena Barraza-García, MD, MSc1,2,3, Maria Rodriguez-Zabala, MSc1, Antonio M. Lerario, MD, PhD7,8, Sara Benito-Sanz, PhD1,2,3, Miriam Aza-Carmona, PhD1,2,3, Angel Campos-Barros, PhD1,2, Alexander A.L. Jorge, MD, PhD5,7 and Karen E. Heath, PhD1,2,3 Purpose: C-type natriuretic peptide (CNP) and its principal receptor, reductions in cyclic guanosine monophosphate synthesis, confirming natriuretic peptide receptor B (NPR-B), have been shown to be their pathogenicity. Interestingly,onehasbeenpreviouslylinkedto important in skeletal development. CNP and NPR-B are encoded by skeletal abnormalities in the spontaneous Nppc mouse long-bone natriuretic peptide precursor-C (NPPC) and natriuretic peptide receptor abnormality (lbab)mutant. NPR2 NPR2 2( ) genes, respectively. While mutations have been Conclusions: Our results demonstrate, for the first time, that NPPC describedinpatientswithskeletaldysplasias and idiopathic short stature mutations cause autosomal dominant short stature in humans. The (ISS), and several Npr2 and Nppc skeletal dysplasia mouse models exist, NPPC NPPC mutations cosegregated with a short stature and small hands no mutations in have been described in patients to date. phenotype. A CNP analog, which is currently in clinical trials for the Methods: NPPC was screened in 668 patients (357 with dispro- treatment of achondroplasia, seems a promising therapeutic approach, portionate short stature and 311 with autosomal dominant ISS) and 29 since it directly replaces the defective protein. -
Two Novel Disease-Causing Variants in BMPR1B Are Associated with Brachydactyly Type A1
European Journal of Human Genetics (2015) 23, 1640–1645 & 2015 Macmillan Publishers Limited All rights reserved 1018-4813/15 www.nature.com/ejhg ARTICLE Two novel disease-causing variants in BMPR1B are associated with brachydactyly type A1 Lemuel Racacho1,2, Ashley M Byrnes1,3, Heather MacDonald3, Helen J Dranse4, Sarah M Nikkel5,6, Judith Allanson6, Elisabeth Rosser7, T Michael Underhill4 and Dennis E Bulman*,1,2,5 Brachydactyly type A1 is an autosomal dominant disorder primarily characterized by hypoplasia/aplasia of the middle phalanges of digits 2–5. Human and mouse genetic perturbations in the BMP-SMAD signaling pathway have been associated with many brachymesophalangies, including BDA1, as causative mutations in IHH and GDF5 have been previously identified. GDF5 interacts directly as the preferred ligand for the BMP type-1 receptor BMPR1B and is important for both chondrogenesis and digit formation. We report pathogenic variants in BMPR1B that are associated with complex BDA1. A c.975A4C (p. (Lys325Asn)) was identified in the first patient displaying absent middle phalanges and shortened distal phalanges of the toes in addition to the significant shortening of middle phalanges in digits 2, 3 and 5 of the hands. The second patient displayed a combination of brachydactyly and arachnodactyly. The sequencing of BMPR1B in this individual revealed a novel c.447-1G4A at a canonical acceptor splice site of exon 8, which is predicted to create a novel acceptor site, thus leading to a translational reading frameshift. Both mutations are most likely to act in a dominant-negative manner, similar to the effects observed in BMPR1B mutations that cause BDA2. -
BMPR1A Is Necessary for Chondrogenesis and Osteogenesis
© 2020. Published by The Company of Biologists Ltd | Journal of Cell Science (2020) 133, jcs246934. doi:10.1242/jcs.246934 RESEARCH ARTICLE BMPR1A is necessary for chondrogenesis and osteogenesis, whereas BMPR1B prevents hypertrophic differentiation Tanja Mang1,2, Kerstin Kleinschmidt-Doerr1, Frank Ploeger3, Andreas Schoenemann4, Sven Lindemann1 and Anne Gigout1,* ABSTRACT essential for osteogenesis and bone formation during this process BMP2 stimulates bone formation and signals preferably through BMP (Bandyopadhyay et al., 2006; McBride et al., 2014; Yang et al., 2013). – receptor (BMPR) 1A, whereas GDF5 is a cartilage inducer and signals Similarly, during bone fracture healing where a similar mechanism – preferably through BMPR1B. Consequently, BMPR1A and BMPR1B are takes place conditional deletion of Bmp2 in mesenchymal believed to be involved in bone and cartilage formation, respectively. progenitors or osteoprogenitors prevents fracture healing (Mi et al., However, their function is not yet fully clarified. In this study, GDF5 2013; Tsuji et al., 2006). In vitro, BMP2 provokes an induction of mutants with a decreased affinity for BMPR1A were generated. These alkaline phosphatase (ALP) activity, osteocalcin expression and matrix mutants, and wild-type GDF5 and BMP2, were tested for their ability to mineralization in pluripotent mesenchymal progenitor cells (Cheng induce dimerization of BMPR1A or BMPR1B with BMPR2, and for their et al., 2003), and also stimulates chondrogenesis or adipogenesis (Date chondrogenic, hypertrophic and osteogenic properties in chondrocytes, et al., 2004). Finally, BMP2 has been shown to promote bone repair in in the multipotent mesenchymal precursor cell line C3H10T1/2 and the animal models (Kleinschmidt et al., 2013; Wulsten et al., 2011) and in human osteosarcoma cell line Saos-2. -
Current Understanding on the Molecular Basis of Chondrogenesis
Clin Pediatr Endocrinol 2014; 23(1), 1–8 Copyright© 2014 by The Japanese Society for Pediatric Endocrinology Review Article Current Understanding on the Molecular Basis of Chondrogenesis Toshimi Michigami1 1 Department of Bone and Mineral Research, Osaka Medical Center and Research Institute for Maternal and Child Health, Osaka, Japan Abstract. Endochondral bone formation involves multiple steps, consisting of the condensation of undifferentiated mesenchymal cells, proliferation and hypertrophic differentiation of chondrocytes, and then mineralization. To date, various factors including transcription factors, soluble mediators, extracellular matrices (ECMs), and cell-cell and cell-matrix interactions have been identified to regulate this sequential, complex process. Moreover, recent studies have revealed that epigenetic and microRNA-mediated mechanisms also play roles in chondrogenesis. Defects in the regulators for the development of growth plate cartilage often cause skeletal dysplasias and growth failure. In this review article, I will describe the current understanding concerning the regulatory mechanisms underlying chondrogenesis. Key words: chondrocyte, transcription factors, growth factors, extracellular matrix, differentiation Introduction plates, and are characterized by the expression of type II, IX, and XI collagen (Col II, IX and In mammals, most of the skeleton including XI) and proteoglycans such as aggrecan. the long bones of the limbs and the vertebral When chondrocytes differentiate, they become columns is formed through endochondral bone hypertrophic and begin to produce a high level formation, which consists of the mesenchymal of alkaline phosphatase and type X collagen (Col condensation of undifferentiated cells, X). Eventually, the terminally differentiated proliferation of chondrocytes and differentiation chondrocytes undergo apoptosis, and the into hypertrophic chondrocytes, followed by cartilaginous matrix is mineralized and replaced mineralization (1–3). -
Discover Dysplasias Gene Panel
Discover Dysplasias Gene Panel Discover Dysplasias tests 109 genes associated with skeletal dysplasias. This list is gathered from various sources, is not designed to be comprehensive, and is provided for reference only. This list is not medical advice and should not be used to make any diagnosis. Refer to lab reports in connection with potential diagnoses. Some genes below may also be associated with non-skeletal dysplasia disorders; those non-skeletal dysplasia disorders are not included on this list. Skeletal Disorders Tested Gene Condition(s) Inheritance ACP5 Spondyloenchondrodysplasia with immune dysregulation (SED) AR ADAMTS10 Weill-Marchesani syndrome (WMS) AR AGPS Rhizomelic chondrodysplasia punctata type 3 (RCDP) AR ALPL Hypophosphatasia AD/AR ANKH Craniometaphyseal dysplasia (CMD) AD Mucopolysaccharidosis type VI (MPS VI), also known as Maroteaux-Lamy ARSB syndrome AR ARSE Chondrodysplasia punctata XLR Spondyloepimetaphyseal dysplasia with joint laxity type 1 (SEMDJL1) B3GALT6 Ehlers-Danlos syndrome progeroid type 2 (EDSP2) AR Multiple joint dislocations, short stature and craniofacial dysmorphism with B3GAT3 or without congenital heart defects (JDSCD) AR Spondyloepimetaphyseal dysplasia (SEMD) Thoracic aortic aneurysm and dissection (TADD), with or without additional BGN features, also known as Meester-Loeys syndrome XL Short stature, facial dysmorphism, and skeletal anomalies with or without BMP2 cardiac anomalies AD Acromesomelic dysplasia AR Brachydactyly type A2 AD BMPR1B Brachydactyly type A1 AD Desbuquois dysplasia CANT1 Multiple epiphyseal dysplasia (MED) AR CDC45 Meier-Gorlin syndrome AR This list is gathered from various sources, is not designed to be comprehensive, and is provided for reference only. This list is not medical advice and should not be used to make any diagnosis. -
BIRTH DEFECTS COMPENDIUM Second Edition BIRTH DEFECTS COMPENDIUM Second Edition
BIRTH DEFECTS COMPENDIUM Second Edition BIRTH DEFECTS COMPENDIUM Second Edition Editor Daniel Bergsma, MD, MPH Clinical Professor of Pediatrics Tufts University, School of Medicine Boston, Massachusetts * * * M Palgrave Macmillan ©The National Foundation 1973,1979 Softcover reprint of the hardcover 1st edition 1979 978-0-333-27876-5 All rights reserved. No part of this publication may be reproduced or transmitted, in any form or by any means, without permission. First published in the U.S.A. 1973, as Birth Defects Atlas and Compendium, by The Williams and Wilkins Company. Reprinted 1973,1974. Second Edition, published by Alan R. Liss, Inc., 1979. First published in the United Kingdom 1979 by THE MACMILLAN PRESS LTD London and Basingstoke Associated companies in Delhi Dublin Hong Kong Johannesburg Lagos Melbourne New York Singapore and Tokyo ISBN 978-1-349-05133-5 ISBN 978-1-349-05131-1 (eBook) DOI 10.1007/978-1-349-05131-1 Views expressed in articles published are the authors', and are not to be attributed to The National Foundation or its editors unless expressly so stated. To enhance medical communication in the birth defects field, The National Foundation has published the Birth Defects Atlas and Compendium, Syndrome ldentification, Original Article Series and developed a series of films and related brochures. Further information can be obtained from: The National Foundation- March of Dimes 1275 Mamaroneck Avenue White Plains, New York 10605 This book is sold subject to the standard conditions of the Net Book Agreement. DEDICATED To each dear little child who is in need of special help and care: to each eager parent who is desperately, hopefully seeking help: to each professional who brings understanding, knowledge and skillful care: to each generous friend who assists The National Foundation to help.