The Dissection of Vertebrates
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The Phylum Vertebrata: a Case for Zoological Recognition Naoki Irie1,2* , Noriyuki Satoh3 and Shigeru Kuratani4
Irie et al. Zoological Letters (2018) 4:32 https://doi.org/10.1186/s40851-018-0114-y REVIEW Open Access The phylum Vertebrata: a case for zoological recognition Naoki Irie1,2* , Noriyuki Satoh3 and Shigeru Kuratani4 Abstract The group Vertebrata is currently placed as a subphylum in the phylum Chordata, together with two other subphyla, Cephalochordata (lancelets) and Urochordata (ascidians). The past three decades, have seen extraordinary advances in zoological taxonomy and the time is now ripe for reassessing whether the subphylum position is truly appropriate for vertebrates, particularly in light of recent advances in molecular phylogeny, comparative genomics, and evolutionary developmental biology. Four lines of current research are discussed here. First, molecular phylogeny has demonstrated that Deuterostomia comprises Ambulacraria (Echinodermata and Hemichordata) and Chordata (Cephalochordata, Urochordata, and Vertebrata), each clade being recognized as a mutually comparable phylum. Second, comparative genomic studies show that vertebrates alone have experienced two rounds of whole-genome duplication, which makes the composition of their gene family unique. Third, comparative gene-expression profiling of vertebrate embryos favors an hourglass pattern of development, the most conserved stage of which is recognized as a phylotypic period characterized by the establishment of a body plan definitively associated with a phylum. This mid-embryonic conservation is supported robustly in vertebrates, but only weakly in chordates. Fourth, certain complex patterns of body plan formation (especially of the head, pharynx, and somites) are recognized throughout the vertebrates, but not in any other animal groups. For these reasons, we suggest that it is more appropriate to recognize vertebrates as an independent phylum, not as a subphylum of the phylum Chordata. -
Crossflow Filtration, Palatal Protrusions and Flow Reversals
W&M ScholarWorks Arts & Sciences Articles Arts and Sciences 2003 Feeding mechanisms in carp: crossflow filtration, palatal protrusions and flow er versals Todd Callan S. Laurie Sanderson College of William and Mary, [email protected] Follow this and additional works at: https://scholarworks.wm.edu/aspubs Part of the Marine Biology Commons Recommended Citation Callan, Todd and Sanderson, S. Laurie, Feeding mechanisms in carp: crossflow filtration, palatal protrusions and flow er versals (2003). Journal of Experimental Biology, 206, 883-892. doi: 10.1242/jeb.00195 This Article is brought to you for free and open access by the Arts and Sciences at W&M ScholarWorks. It has been accepted for inclusion in Arts & Sciences Articles by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. The Journal of Experimental Biology 206, 883-892 883 © 2003 The Company of Biologists Ltd doi:10.1242/jeb.00195 Feeding mechanisms in carp: crossflow filtration, palatal protrusions and flow reversals W. Todd Callan and S. Laurie Sanderson* Department of Biology, College of William and Mary, Williamsburg, VA 23187, USA *Author for correspondence (e-mail: [email protected]) Accepted 4 December 2002 Summary It has been hypothesized that, when engulfing food chemosensory function rather than a mechanical particle- mixed with inorganic particles during benthic feeding, sorting function. However, palatal protrusions did retain cyprinid fish use protrusions of tissue from the palatal large food particles while large inorganic particles were organ to retain the food particles while the inorganic spit anteriorly from the mouth. We also investigated particles are expelled from the opercular slits. -
Cyclostome Embryology and Early Evolutionary History of Vertebrates Kinya G
329 Cyclostome embryology and early evolutionary history of vertebrates Kinya G. Ota and Shigeru Kuratani1 Evolutionary Morphology Research Group, Center for Developmental Biology, RIKEN, Kobe, Japan Synopsis Modern agnathans include only two groups, the lampreys and the hagfish, that collectively comprise the group Cyclostomata. Although accumulating molecular data support the cyclostomes as a monophyletic group, there remain some unsettled questions regarding the evolutionary relationships of these animals in that they differ greatly in anatomical and developmental patterns and in their life histories. In this review, we summarize recent developmental data on the lamprey and discuss some questions related to vertebrate evolutionary development raised by the limited information available on hagfish embryos. Comparison of the lamprey and gnathostome developmental patterns suggests some plesiomorphic traits of vertebrates that would have already been established in the most recent common ancestor of the vertebrates. Understanding hagfish development will further clarify the, as yet, unrecognized ancestral characters that either the lampreys or hagfishes may have lost. We stress the immediate importance of hagfish embryology in the determination of the most plausible scenario for the early history of vertebrate evolution, by addressing questions about the origins of the neural crest, thyroid, and adenohypophysis as examples. Introduction—phylogeny and evolution anatomy (Janvier 1996; see subsequently), which In their basal position on the phylogenetic tree of the may, of course, simply reflect a secondary degen- vertebrates, the extant agnathans (the lampreys and erative condition in this animal. We should also the hagfish) are considered important for any under- remember that the lampreys also lack a cartilaginous standing of the history of the vertebrates (reviewed skeleton in the trunk in the larval stages, and even by Kuratani et al. -
Brains of Primitive Chordates 439
Brains of Primitive Chordates 439 Brains of Primitive Chordates J C Glover, University of Oslo, Oslo, Norway although providing a more direct link to the evolu- B Fritzsch, Creighton University, Omaha, NE, USA tionary clock, is nevertheless hampered by differing ã 2009 Elsevier Ltd. All rights reserved. rates of evolution, both among species and among genes, and a still largely deficient fossil record. Until recently, it was widely accepted, both on morpholog- ical and molecular grounds, that cephalochordates Introduction and craniates were sister taxons, with urochordates Craniates (which include the sister taxa vertebrata being more distant craniate relatives and with hemi- and hyperotreti, or hagfishes) represent the most chordates being more closely related to echinoderms complex organisms in the chordate phylum, particu- (Figure 1(a)). The molecular data only weakly sup- larly with respect to the organization and function of ported a coherent chordate taxon, however, indicat- the central nervous system. How brain complexity ing that apparent morphological similarities among has arisen during evolution is one of the most chordates are imposed on deep divisions among the fascinating questions facing modern science, and it extant deuterostome taxa. Recent analysis of a sub- speaks directly to the more philosophical question stantially larger number of genes has reversed the of what makes us human. Considerable interest has positions of cephalochordates and urochordates, pro- therefore been directed toward understanding the moting the latter to the most closely related craniate genetic and developmental underpinnings of nervous relatives (Figure 1(b)). system organization in our more ‘primitive’ chordate relatives, in the search for the origins of the vertebrate Comparative Appearance of Brains, brain in a common chordate ancestor. -
1 Morphology and Dynamics of Testicular Gametogenesis in Sympterygia Bonapartii
Morphology and dynamics of testicular gametogenesis in Sympterygia bonapartii (Chondrichthyes, Rajidae). Ana C. Moya; María C. Díaz Andrade & Elena J. Galíndez Lab. de Citología, Histología y Embriología Animal DBByF, UNS, San Juan 670, 8000, Bahía Blanca, Argentina - INBIOSUR-CONICET. E-mail: [email protected] ABSTRACT. Chondrichthyans constitute a successful group with a long and intricate evolutionary history that makes them highly vulnerable. The smallnose fanskate, Sympterygia bonapartii (MÜLLER & HENLE, 1841) is one of the most disembarked items in commercial harbors in Argentina. In this work, the microscopic architecture of mature male gonads and the dynamics of cysts development are analyzed as an interesting tool for understanding the reproductive biology of this specie. Some biological data related to reproduction are given as well. Two seasons were sampled (fall and spring) and length classes’ frequency distribution and maturity stages frequency distribution are given. LT 50 for males was estimated as 58.01 cm of total length. Testes are symmetric, peer, lobated, with several germinal zones. Inside the gonads, there are many spermatocysts, which contain reproductive cells at the same developmental stage. On the basis of their cytological and microanatomical features, seven maturative degrees of the spermatogenic series were differentiated. Few Leydig cells were recognized at the interstitial tissue between cysts. The microscopic quantitative analysis performed in this work provides a promising tool that may contribute to a better knowledge of the reproductive cycles of this economically and ecologically important species. 1 KEY WORDS: Histology, testis, smallnose fanskate, spermatogenesis. RESUMEN. Morfología y dinámica de la gametogénesis testicular en Sympterygia bonapartii (Chondrichthyes, Rajidae). -
An Action Plan for Darwin's Frogs Brings Key Stakeholders Together
A flagship for Austral temperate forest conservation: an action plan for Darwin's frogs brings key stakeholders together C LAUDIO A ZAT,ANDRÉS V ALENZUELA-SÁNCHEZ,SOLEDAD D ELGADO A NDREW A. CUNNINGHAM,MARIO A LVARADO-RYBAK,JOHARA B OURKE R AÚL B RIONES,OSVALDO C ABEZA,CAMILA C ASTRO-CARRASCO,ANDRES C HARRIER C LAUDIO C ORREA,MARTHA L. CRUMP,CÉSAR C. CUEVAS,MARIANO DE LA M AZA S ANDRA D ÍAZ-VIDAL,EDGARDO F LORES,GEMMA H ARDING,ESTEBAN O. LAVILLA M ARCO A. MENDEZ,FRANK O BERWEMMER,JUAN C ARLOS O RTIZ,HERNÁN P ASTORE A LEXANDRA P EÑAFIEL-RICAURTE,LEONORA R OJAS-SALINAS J OSÉ M ANUEL S ERRANO,MAXIMILIANO A. SEPÚLVEDA,VERÓNICA T OLEDO C ARMEN Ú BEDA,DAVID E. URIBE-RIVERA,CATALINA V ALDIVIA S ALLY W REN and A RIADNE A NGULO Abstract Darwin’sfrogsRhinoderma darwinii and Rhino- the Austral temperate forests of Chile and Argentina. This derma rufum are the only known species of amphibians recommendation forms part of the vision of the Bination- in which males brood their offspring in their vocal sacs. We al Conservation Strategy for Darwin’sFrogs,whichwas propose these frogs as flagship species for the conservation of launched in . The strategy is a conservation initiative CLAUDIO AZAT* (Corresponding author, orcid.org/0000-0001-9201-7886), EDGARDO FLORES* Fundación Nahuelbuta Natural, Cañete, Chile MARIO ALVARADO-RYBAK*, ALEXANDRA PEÑAFIEL-RICAURTE* and CATALINA VALDIVIA GEMMA HARDING* Durrell Institute of Conservation and Ecology, School of Sustainability Research Centre, Life Sciences Faculty, Universidad Andres Anthropology and Conservation, University of Kent, Canterbury, UK Bello, Republica 440, Santiago, Chile. -
Estalles, María Lourdes. 2012
Tesis Doctoral Características de historia de vida y explotación comercial de la raya Sympterygia bonapartii en el Golfo San Matías Estalles, María Lourdes 2012 Este documento forma parte de la colección de tesis doctorales y de maestría de la Biblioteca Central Dr. Luis Federico Leloir, disponible en digital.bl.fcen.uba.ar. Su utilización debe ser acompañada por la cita bibliográfica con reconocimiento de la fuente. This document is part of the doctoral theses collection of the Central Library Dr. Luis Federico Leloir, available in digital.bl.fcen.uba.ar. It should be used accompanied by the corresponding citation acknowledging the source. Cita tipo APA: Estalles, María Lourdes. (2012). Características de historia de vida y explotación comercial de la raya Sympterygia bonapartii en el Golfo San Matías. Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Cita tipo Chicago: Estalles, María Lourdes. "Características de historia de vida y explotación comercial de la raya Sympterygia bonapartii en el Golfo San Matías". Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. 2012. Dirección: Biblioteca Central Dr. Luis F. Leloir, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires. Contacto: [email protected] Intendente Güiraldes 2160 - C1428EGA - Tel. (++54 +11) 4789-9293 UNIVERSIDAD DE BUENOS AIRES Facultad de Ciencias Exactas y Naturales Características de historia de vida y explotación comercial de la raya Sympterygia bonapartii en el Golfo San Matías Tesis presentada para optar al título de Doctor de la Universidad de Buenos Aires en el área de Ciencias Biológicas María Lourdes Estalles Director de tesis: Dr. Edgardo E. -
Constraints on the Timescale of Animal Evolutionary History
Palaeontologia Electronica palaeo-electronica.org Constraints on the timescale of animal evolutionary history Michael J. Benton, Philip C.J. Donoghue, Robert J. Asher, Matt Friedman, Thomas J. Near, and Jakob Vinther ABSTRACT Dating the tree of life is a core endeavor in evolutionary biology. Rates of evolution are fundamental to nearly every evolutionary model and process. Rates need dates. There is much debate on the most appropriate and reasonable ways in which to date the tree of life, and recent work has highlighted some confusions and complexities that can be avoided. Whether phylogenetic trees are dated after they have been estab- lished, or as part of the process of tree finding, practitioners need to know which cali- brations to use. We emphasize the importance of identifying crown (not stem) fossils, levels of confidence in their attribution to the crown, current chronostratigraphic preci- sion, the primacy of the host geological formation and asymmetric confidence intervals. Here we present calibrations for 88 key nodes across the phylogeny of animals, rang- ing from the root of Metazoa to the last common ancestor of Homo sapiens. Close attention to detail is constantly required: for example, the classic bird-mammal date (base of crown Amniota) has often been given as 310-315 Ma; the 2014 international time scale indicates a minimum age of 318 Ma. Michael J. Benton. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Philip C.J. Donoghue. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Robert J. -
Tunicate Mitogenomics and Phylogenetics: Peculiarities of the Herdmania Momus Mitochondrial Genome and Support for the New Chordate Phylogeny
Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny. Tiratha Raj Singh, Georgia Tsagkogeorga, Frédéric Delsuc, Samuel Blanquart, Noa Shenkar, Yossi Loya, Emmanuel Douzery, Dorothée Huchon To cite this version: Tiratha Raj Singh, Georgia Tsagkogeorga, Frédéric Delsuc, Samuel Blanquart, Noa Shenkar, et al.. Tu- nicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny.. BMC Genomics, BioMed Central, 2009, 10, pp.534. 10.1186/1471-2164-10-534. halsde-00438100 HAL Id: halsde-00438100 https://hal.archives-ouvertes.fr/halsde-00438100 Submitted on 2 Dec 2009 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. BMC Genomics BioMed Central Research article Open Access Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny Tiratha Raj Singh†1, Georgia Tsagkogeorga†2, Frédéric Delsuc2, Samuel Blanquart3, Noa -
A Small Lepidosauromorph Reptile from the Early Triassic of Poland
A SMALL LEPIDOSAUROMORPH REPTILE FROM THE EARLY TRIASSIC OF POLAND SUSAN E. EVANS and MAGDALENA BORSUK−BIAŁYNICKA Evans, S.E. and Borsuk−Białynicka, M. 2009. A small lepidosauromorph reptile from the Early Triassic of Poland. Palaeontologia Polonica 65, 179–202. The Early Triassic karst deposits of Czatkowice quarry near Kraków, southern Poland, has yielded a diversity of fish, amphibians and small reptiles. Two of these reptiles are lepido− sauromorphs, a group otherwise very poorly represented in the Triassic record. The smaller of them, Sophineta cracoviensis gen. et sp. n., is described here. In Sophineta the unspecial− ised vertebral column is associated with the fairly derived skull structure, including the tall facial process of the maxilla, reduced lacrimal, and pleurodonty, that all resemble those of early crown−group lepidosaurs rather then stem−taxa. Cladistic analysis places this new ge− nus as the sister group of Lepidosauria, displacing the relictual Middle Jurassic genus Marmoretta and bringing the origins of Lepidosauria closer to a realistic time frame. Key words: Reptilia, Lepidosauria, Triassic, phylogeny, Czatkowice, Poland. Susan E. Evans [[email protected]], Department of Cell and Developmental Biology, Uni− versity College London, Gower Street, London, WC1E 6BT, UK. Magdalena Borsuk−Białynicka [[email protected]], Institut Paleobiologii PAN, Twarda 51/55, PL−00−818 Warszawa, Poland. Received 8 March 2006, accepted 9 January 2007 180 SUSAN E. EVANS and MAGDALENA BORSUK−BIAŁYNICKA INTRODUCTION Amongst living reptiles, lepidosaurs (snakes, lizards, amphisbaenians, and tuatara) form the largest and most successful group with more than 7 000 widely distributed species. The two main lepidosaurian clades are Rhynchocephalia (the living Sphenodon and its extinct relatives) and Squamata (lizards, snakes and amphisbaenians). -
Reproductive Biology of Sympterygia Bonapartii (Chondrichthyes: Rajiformes: Arhynchobatidae) in San Matías Gulf, Patagonia, Argentina
Neotropical Ichthyology, 15(1): e160022, 2017 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20160022 Published online: 03 April 2017 (ISSN 1982-0224) Printed: 31 March 2017 (ISSN 1679-6225) Reproductive biology of Sympterygia bonapartii (Chondrichthyes: Rajiformes: Arhynchobatidae) in San Matías Gulf, Patagonia, Argentina María L. Estalles1, María R. Perier2 and Edgardo E. Di Giácomo2 This study estimates and analyses the reproductive parameters and cycle of Sympterygia bonapartii in San Matías Gulf, northern Patagonia, Argentina. A total of 827 males and 1,299 females were analysed. Males ranged from 185 to 687 mm of total length (TL) and females from 180 to 742 mm TL. Sexual dimorphism was detected; females were larger, heavier, exhibited heavier livers, wider discs and matured at lager sizes than males. Immature females ranged from 180 to 625 mm TL, maturing females from 408 to 720 mm TL, mature ones from 514 to 742 mm TL and females with egg capsules from 580 to 730 mm TL. Immature males ranged from 185 to 545 mm TL, maturing ones from 410 to 620 mm TL and mature males from 505 to 687 mm TL. Size at which 50% of the skates reached maturity was estimated to be 545 mm TL for males and 594 mm TL for females. According to the reproductive indexes analysed, S. bonapartii exhibited a seasonal reproductive pattern. Mating may occur during winter-early spring and the egg-laying season, during spring and summer. Keywords: Elasmobranchii, Reproduction, Skate, South Western Atlantic Ocean. El presente estudio estima y analiza los parámetros reproductivos y el ciclo reproductivo de Sympterygia bonapartii en el Golfo San Matías, Patagonia norte, Argentina. -
Egg Capsules of the Filetail Fanskate Sympterygia Lima
Ichthyol Res (2013) 60:203–208 DOI 10.1007/s10228-012-0333-8 FULL PAPER Egg capsules of the Filetail fanskate Sympterygia lima (Poeppig 1835) (Rajiformes, Arhynchobatidae) from the southeastern Pacific Ocean, with observations on captive egg-laying Francisco Concha • Naitı´ Morales • Javiera Larraguibel Received: 31 October 2012 / Revised: 13 December 2012 / Accepted: 13 December 2012 / Published online: 6 February 2013 Ó The Ichthyological Society of Japan 2013 Abstract A total of 42 egg capsules of Sympterygia lima the Bignose fanskate, Sympterygia acuta (Garman 1877), are examined in this study. Freshly laid egg capsules are occurring exclusively from Brazil to Argentina; the pale yellow-brownish in color and turn to dark brown over Smallnose fanskate, Sympterygia bonapartii (Mu¨ller and time in sea water. Dorsal and ventral surfaces are soft and Henle 1841), ranging from the southwestern Atlantic to the slightly striated. Anterior horns are shorter than posterior Magellan Strait; the Shorttail fanskate, Sympterygia brev- and are arranged in parallel. Posterior horns transition into icaudata (Cope 1877) and the Filetail fanskate, Symptery- long coiled tendrils, which are the first to emerge through gia lima (Poeppig 1835), both restricted to Chilean coasts the cloaca during egg-laying. Notes on oviposition rates are (McEachran and Miyake 1990b; Pequen˜o and Lamilla discussed; these were shown to vary from 4 to 20 days, 1996; Pequen˜o 1997). Phylogenetic interrelationships and with two eggs being deposited each time. The presence of zoogeography within Sympterygia and its sister group, tendril-like posterior horns is not common in rajids. They Psammobatis Gu¨nther 1870 have been investigated by seem to occur only within the genus Sympterygia, McEachran and Miyake (1990a, b) and McEachran and becoming a useful character for distinguishing them from Dunn (1998).