Review Article the Main Aeromonas Pathogenic Factors
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University of Cincinnati
UNIVERSITY OF CINCINNATI Date: February 22, 2007 I, _ Samuel Lee Hayes________________________________________, hereby submit this work as part of the requirements for the degree of: Doctor of Philosophy in: Biological Sciences It is entitled: Response of Mammalian Models to Exposure of Bacteria from the Genus Aeromonas Evaluated using Transcriptional Analysis and Conjectures on Disease Mechanisms This work and its defense approved by: Chair: _Brian K. Kinkle _Dennis W. Grogan _Richard D. Karp _Mario Medvedovic _Stephen J. Vesper Response of Mammalian Models to Exposure of Bacteria from the Genus Aeromonas Evaluated using Transcriptional Analysis and Conjectures on Disease Mechanisms A dissertation submitted to the Division of Graduate Studies and Research of the University of Cincinnati in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in the Department of Biological Sciences of the College of Arts and Sciences 2007 by Samuel Lee Hayes B.S. Ohio University, 1978 M.S. University of Cincinnati, 1986 Committee Chair: Dr. Brian K. Kinkle Abstract The genus Aeromonas contains virulent bacteria implicated in waterborne disease, as well as avirulent strains. One of my research objectives was to identify and characterize host- pathogen relationships specific to Aeromonas spp. Aeromonas virulence was assessed using changes in host mRNA expression after infecting cell cultures and live animals. Messenger RNA extracts were hybridized to murine genomic microarrays. Initially, these model systems were infected with two virulent A. hydrophila strains, causing up-regulation of over 200 and 50 genes in animal and cell culture tissues, respectively. Twenty-six genes were common between the two model systems. The live animal model was used to define virulence for many Aeromonas spp. -
Identification of Pasteurella Species and Morphologically Similar Organisms
UK Standards for Microbiology Investigations Identification of Pasteurella species and Morphologically Similar Organisms Issued by the Standards Unit, Microbiology Services, PHE Bacteriology – Identification | ID 13 | Issue no: 3 | Issue date: 04.02.15 | Page: 1 of 28 © Crown copyright 2015 Identification of Pasteurella species and Morphologically Similar Organisms Acknowledgments UK Standards for Microbiology Investigations (SMIs) are developed under the auspices of Public Health England (PHE) working in partnership with the National Health Service (NHS), Public Health Wales and with the professional organisations whose logos are displayed below and listed on the website https://www.gov.uk/uk- standards-for-microbiology-investigations-smi-quality-and-consistency-in-clinical- laboratories. SMIs are developed, reviewed and revised by various working groups which are overseen by a steering committee (see https://www.gov.uk/government/groups/standards-for-microbiology-investigations- steering-committee). The contributions of many individuals in clinical, specialist and reference laboratories who have provided information and comments during the development of this document are acknowledged. We are grateful to the Medical Editors for editing the medical content. For further information please contact us at: Standards Unit Microbiology Services Public Health England 61 Colindale Avenue London NW9 5EQ E-mail: [email protected] Website: https://www.gov.uk/uk-standards-for-microbiology-investigations-smi-quality- and-consistency-in-clinical-laboratories UK Standards for Microbiology Investigations are produced in association with: Logos correct at time of publishing. Bacteriology – Identification | ID 13 | Issue no: 3 | Issue date: 04.02.15 | Page: 2 of 28 UK Standards for Microbiology Investigations | Issued by the Standards Unit, Public Health England Identification of Pasteurella species and Morphologically Similar Organisms Contents ACKNOWLEDGMENTS ......................................................................................................... -
Delineation of Aeromonas Hydrophila Pathotypes by Dectection of Putative Virulence Factors Using Polymerase Chain Reaction and N
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by DigitalCommons@Kennesaw State University Kennesaw State University DigitalCommons@Kennesaw State University Master of Science in Integrative Biology Theses Biology & Physics Summer 7-20-2015 Delineation of Aeromonas hydrophila Pathotypes by Dectection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay John Metz Kennesaw State University, [email protected] Follow this and additional works at: http://digitalcommons.kennesaw.edu/integrbiol_etd Part of the Integrative Biology Commons Recommended Citation Metz, John, "Delineation of Aeromonas hydrophila Pathotypes by Dectection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay" (2015). Master of Science in Integrative Biology Theses. Paper 7. This Thesis is brought to you for free and open access by the Biology & Physics at DigitalCommons@Kennesaw State University. It has been accepted for inclusion in Master of Science in Integrative Biology Theses by an authorized administrator of DigitalCommons@Kennesaw State University. For more information, please contact [email protected]. Delineation of Aeromonas hydrophila Pathotypes by Detection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay John Michael Metz Submitted in partial fulfillment of the requirements for the Master of Science Degree in Integrative Biology Thesis Advisor: Donald J. McGarey, Ph.D Department of Molecular and Cellular Biology Kennesaw State University ABSTRACT Aeromonas hydrophila is a Gram-negative, bacterial pathogen of humans and other vertebrates. Human diseases caused by A. hydrophila range from mild gastroenteritis to soft tissue infections including cellulitis and acute necrotizing fasciitis. When seen in fish it causes dermal ulcers and fatal septicemia, which are detrimental to aquaculture stocks and has major economic impact to the industry. -
Microbial Biofilms – Veronica Lazar and Eugenia Bezirtzoglou
MEDICAL SCIENCES – Microbial Biofilms – Veronica Lazar and Eugenia Bezirtzoglou MICROBIAL BIOFILMS Veronica Lazar University of Bucharest, Faculty of Biology, Dept. of Microbiology, 060101 Aleea Portocalelor No. 1-3, Sector 6, Bucharest, Romania; Eugenia Bezirtzoglou Democritus University of Thrace - Faculty of Agricultural Development, Dept. of Microbiology, Orestiada, Greece Keywords: Microbial adherence to cellular/inert substrata, Biofilms, Intercellular communication, Quorum Sensing (QS) mechanism, Dental plaque, Tolerance to antimicrobials, Anti-biofilm strategies, Ecological and biotechnological significance of biofilms Contents 1. Introduction 2. Definition 3. Microbial Adherence 4. Development, Architecture of a Mature Biofilm and Properties 5. Intercellular Communication: Intra-, Interspecific and Interkingdom Signaling, By QS Mechanism and Implications 6. Medical Significance of Microbial Biofilms Formed on Cellular Substrata and Medical Devices 6.1. Microbial Biofilms on Medical Devices 6.2. Microorganisms - Biomaterial Interactions 6.3. Phenotypical Resistance or Tolerance to Antimicrobials; Mechanisms of Tolerance 7. New Strategies for Prevention and Treatment of Biofilm Associated Infections 8. Ecological Significance 9. Biotechnological / Industrial Applications 10. Conclusion Acknowledgments Glossary Bibliography Biographical Sketches UNESCO – EOLSS Summary A biofilm is a sessileSAMPLE microbial community coCHAPTERSmposed of cells embedded in a matrix of exopolysaccharide matrix attached to a substratum or interface. Biofilms -
Supplementary Information for Microbial Electrochemical Systems Outperform Fixed-Bed Biofilters for Cleaning-Up Urban Wastewater
Electronic Supplementary Material (ESI) for Environmental Science: Water Research & Technology. This journal is © The Royal Society of Chemistry 2016 Supplementary information for Microbial Electrochemical Systems outperform fixed-bed biofilters for cleaning-up urban wastewater AUTHORS: Arantxa Aguirre-Sierraa, Tristano Bacchetti De Gregorisb, Antonio Berná, Juan José Salasc, Carlos Aragónc, Abraham Esteve-Núñezab* Fig.1S Total nitrogen (A), ammonia (B) and nitrate (C) influent and effluent average values of the coke and the gravel biofilters. Error bars represent 95% confidence interval. Fig. 2S Influent and effluent COD (A) and BOD5 (B) average values of the hybrid biofilter and the hybrid polarized biofilter. Error bars represent 95% confidence interval. Fig. 3S Redox potential measured in the coke and the gravel biofilters Fig. 4S Rarefaction curves calculated for each sample based on the OTU computations. Fig. 5S Correspondence analysis biplot of classes’ distribution from pyrosequencing analysis. Fig. 6S. Relative abundance of classes of the category ‘other’ at class level. Table 1S Influent pre-treated wastewater and effluents characteristics. Averages ± SD HRT (d) 4.0 3.4 1.7 0.8 0.5 Influent COD (mg L-1) 246 ± 114 330 ± 107 457 ± 92 318 ± 143 393 ± 101 -1 BOD5 (mg L ) 136 ± 86 235 ± 36 268 ± 81 176 ± 127 213 ± 112 TN (mg L-1) 45.0 ± 17.4 60.6 ± 7.5 57.7 ± 3.9 43.7 ± 16.5 54.8 ± 10.1 -1 NH4-N (mg L ) 32.7 ± 18.7 51.6 ± 6.5 49.0 ± 2.3 36.6 ± 15.9 47.0 ± 8.8 -1 NO3-N (mg L ) 2.3 ± 3.6 1.0 ± 1.6 0.8 ± 0.6 1.5 ± 2.0 0.9 ± 0.6 TP (mg -
Table S4. Phylogenetic Distribution of Bacterial and Archaea Genomes in Groups A, B, C, D, and X
Table S4. Phylogenetic distribution of bacterial and archaea genomes in groups A, B, C, D, and X. Group A a: Total number of genomes in the taxon b: Number of group A genomes in the taxon c: Percentage of group A genomes in the taxon a b c cellular organisms 5007 2974 59.4 |__ Bacteria 4769 2935 61.5 | |__ Proteobacteria 1854 1570 84.7 | | |__ Gammaproteobacteria 711 631 88.7 | | | |__ Enterobacterales 112 97 86.6 | | | | |__ Enterobacteriaceae 41 32 78.0 | | | | | |__ unclassified Enterobacteriaceae 13 7 53.8 | | | | |__ Erwiniaceae 30 28 93.3 | | | | | |__ Erwinia 10 10 100.0 | | | | | |__ Buchnera 8 8 100.0 | | | | | | |__ Buchnera aphidicola 8 8 100.0 | | | | | |__ Pantoea 8 8 100.0 | | | | |__ Yersiniaceae 14 14 100.0 | | | | | |__ Serratia 8 8 100.0 | | | | |__ Morganellaceae 13 10 76.9 | | | | |__ Pectobacteriaceae 8 8 100.0 | | | |__ Alteromonadales 94 94 100.0 | | | | |__ Alteromonadaceae 34 34 100.0 | | | | | |__ Marinobacter 12 12 100.0 | | | | |__ Shewanellaceae 17 17 100.0 | | | | | |__ Shewanella 17 17 100.0 | | | | |__ Pseudoalteromonadaceae 16 16 100.0 | | | | | |__ Pseudoalteromonas 15 15 100.0 | | | | |__ Idiomarinaceae 9 9 100.0 | | | | | |__ Idiomarina 9 9 100.0 | | | | |__ Colwelliaceae 6 6 100.0 | | | |__ Pseudomonadales 81 81 100.0 | | | | |__ Moraxellaceae 41 41 100.0 | | | | | |__ Acinetobacter 25 25 100.0 | | | | | |__ Psychrobacter 8 8 100.0 | | | | | |__ Moraxella 6 6 100.0 | | | | |__ Pseudomonadaceae 40 40 100.0 | | | | | |__ Pseudomonas 38 38 100.0 | | | |__ Oceanospirillales 73 72 98.6 | | | | |__ Oceanospirillaceae -
Yopb and Yopd Constitute a Novel Class of Yersinia Yop Proteins
INFECTION AND IMMUNITY, Jan. 1993, p. 71-80 Vol. 61, No. 1 0019-9567/93/010071-10$02.00/0 Copyright © 1993, American Society for Microbiology YopB and YopD Constitute a Novel Class of Yersinia Yop Proteins SEBASTIAN HAKANSSON,1 THOMAS BERGMAN,1 JEAN-CLAUDE VANOOTEGHEM, 2 GUY CORNELIS,2 AND HANS WOLF-WATZ1* Department of Cell and Molecular Biology, University of Umed, S-901 87 Umed, Sweden,' and Microbial Pathogenesis Unit, Intemnational Institute of Cellular and Molecular Pathology and Faculte6 de Medecine, Universite Catholique de Louvain, B-1200 Brussels, Belgium2 Received 21 May 1992/Accepted 21 October 1992 Virulent Yersinia species harbor a common plasmid that encodes essential virulence determinants (Yersinia outer proteins [Yops]), which are regulated by the extracellular stimuli Ca2" and temperature. The V-antigen-encoding operon has been shown to be involved in the Ca2 -regulated negative pathway. The genetic organization of the V-antigen operon and the sequence of the krGVH genes were recently presented. The V-antigen operon was shown to be a polycistronic operon having the gene order kcrGVH-yopBD (T. Bergman, S. Hakansson, A. Forsberg, L. Norlander, A. Maceliaro, A. Backman, I. Bolin, and H. Wolf-Watz, J. Bacteriol. 173:1607-1616, 1991; S. B. Price, K. Y. Leung, S. S. Barve, and S. C. Straley, J. Bacteriol. 171:5646-5653, 1989). We present here the sequence of the distal part of the V-antigen operons of Yersinia pseudotuberculosis and Yersinia enterocolitica. The sequence information encompasses theyopB andyopD genes and a downstream region in both species. We conclude that the V-antigen operon ends with theyopD gene. -
Aeromonas Veronii Biovar Sobria Gastoenteritis: a Case Report
iMedPub Journals 2011 ARCHIVES OF CLINICAL MICROBIOLOGY Vol. 2 No. 5:3 This article is available from: http://www.acmicrob.com doi: 10:3823/240 Aeromonas veronii biovar sobria gastoenteritis: a case report Afreenish Hassan*, Javaid Usman, Fatima Kaleem, National University of Sciences and Technology, Islamabad, Pakistan Maria Omair, Ali Khalid, Muhammad Iqbal * Corresponding author: Dr Afreenish Hassan Abstract E-mail: [email protected] Aeromonas veronii biovar sobria is associated with various infections in humans. Isola- tion of Aeromonas sobria in patients with gastroenteritis is not unusual. We describe a case of Aeromonas veronii biovar sobria gastroenteritis in a young patient. This is the first documented case reported from Pakistan. Introduction were collected for laboratory investigation. He was shifted to the medical ward and was started on Inj. Ciprofloxacin 200mg The genus Aeromonas include many species but the most twice daily, infusion Metronidazole 500mg three times a day, common ones associated with human infections are Aeromo- injection Maxolon 10 mg three times a day. He was rehydrated nas veronii, Aeromons hydrophila, Aeromonas jandaei, Aeromo- with infusion Normal saline 1000ml once daily. He was advised nas caviae and Aeromonas schubertii [1]. The diseases caused to take orally Oral Rehydration salt (ORS). His blood complete by Aeromonas include gastroenteritis, ear and wound infec- picture and urine routine examination was unremarkable ex- tions, cellulitis, urinary tract infections and septicemia [2]. We cept mildly raised neutrophil count in blood (73%) (Table 1,2,3). describe here a case of Aeromonas veronii biovar sobria gastro- On gross examination, his stool sample was of green in colour, enteritis in a young patient. -
The Occurrence of Aeromonas in Drinking Water, Tap Water and the Porsuk River
Brazilian Journal of Microbiology (2011) 42: 126-131 ISSN 1517-8382 THE OCCURRENCE OF AEROMONAS IN DRINKING WATER, TAP WATER AND THE PORSUK RIVER Merih Kivanc1, Meral Yilmaz1*, Filiz Demir1 Anadolu University, Faculty of Science, Department of Biology, Eskiehir, Turkey. Submitted: April 01, 2010; Returned to authors for corrections: May 11, 2010; Approved: June 21, 2010. ABSTRACT The occurrence of Aeromonas spp. in the Porsuk River, public drinking water and tap water in the City of Eskisehir (Turkey) was monitored. Fresh water samples were collected from several sampling sites during a period of one year. Total 102 typical colonies of Aeromonas spp. were submitted to biochemical tests for species differentiation and of 60 isolates were confirmed by biochemical tests. Further identifications of isolates were carried out first with the VITEK system (BioMe˜rieux) and then selected isolates from different phenotypes (VITEK types) were identified using the DuPont Qualicon RiboPrinter® system. Aeromonas spp. was detected only in the samples from the Porsuk River. According to the results obtained with the VITEK system, our isolates were 13% Aeromonas hydrophila, 37% Aeromonas caviae, 35% Pseudomonas putida, and 15% Pseudomonas acidovorans. In addition Pseudomonas sp., Pseudomonas maltophila, Aeromonas salmonicida, Aeromonas hydrophila, and Aeromonas media species were determined using the RiboPrinter® system. The samples taken from the Porsuk River were found to contain very diverse Aeromonas populations that can pose a risk for the residents of the city. On the other hand, drinking water and tap water of the City are free from Aeromonas pathogens and seem to be reliable water sources for the community. -
A Review of Fish Vaccine Development Strategies: Conventional Methods and Modern Biotechnological Approaches
microorganisms Review A Review of Fish Vaccine Development Strategies: Conventional Methods and Modern Biotechnological Approaches Jie Ma 1,2 , Timothy J. Bruce 1,2 , Evan M. Jones 1,2 and Kenneth D. Cain 1,2,* 1 Department of Fish and Wildlife Sciences, College of Natural Resources, University of Idaho, Moscow, ID 83844, USA; [email protected] (J.M.); [email protected] (T.J.B.); [email protected] (E.M.J.) 2 Aquaculture Research Institute, University of Idaho, Moscow, ID 83844, USA * Correspondence: [email protected] Received: 25 October 2019; Accepted: 14 November 2019; Published: 16 November 2019 Abstract: Fish immunization has been carried out for over 50 years and is generally accepted as an effective method for preventing a wide range of bacterial and viral diseases. Vaccination efforts contribute to environmental, social, and economic sustainability in global aquaculture. Most licensed fish vaccines have traditionally been inactivated microorganisms that were formulated with adjuvants and delivered through immersion or injection routes. Live vaccines are more efficacious, as they mimic natural pathogen infection and generate a strong antibody response, thus having a greater potential to be administered via oral or immersion routes. Modern vaccine technology has targeted specific pathogen components, and vaccines developed using such approaches may include subunit, or recombinant, DNA/RNA particle vaccines. These advanced technologies have been developed globally and appear to induce greater levels of immunity than traditional fish vaccines. Advanced technologies have shown great promise for the future of aquaculture vaccines and will provide health benefits and enhanced economic potential for producers. This review describes the use of conventional aquaculture vaccines and provides an overview of current molecular approaches and strategies that are promising for new aquaculture vaccine development. -
An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity
microorganisms Review An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity Ana Fernández-Bravo and Maria José Figueras * Unit of Microbiology, Department of Basic Health Sciences, Faculty of Medicine and Health Sciences, IISPV, University Rovira i Virgili, 43201 Reus, Spain; [email protected] * Correspondence: mariajose.fi[email protected]; Tel.: +34-97-775-9321; Fax: +34-97-775-9322 Received: 31 October 2019; Accepted: 14 January 2020; Published: 17 January 2020 Abstract: The genus Aeromonas belongs to the Aeromonadaceae family and comprises a group of Gram-negative bacteria widely distributed in aquatic environments, with some species able to cause disease in humans, fish, and other aquatic animals. However, bacteria of this genus are isolated from many other habitats, environments, and food products. The taxonomy of this genus is complex when phenotypic identification methods are used because such methods might not correctly identify all the species. On the other hand, molecular methods have proven very reliable, such as using the sequences of concatenated housekeeping genes like gyrB and rpoD or comparing the genomes with the type strains using a genomic index, such as the average nucleotide identity (ANI) or in silico DNA–DNA hybridization (isDDH). So far, 36 species have been described in the genus Aeromonas of which at least 19 are considered emerging pathogens to humans, causing a broad spectrum of infections. Having said that, when classifying 1852 strains that have been reported in various recent clinical cases, 95.4% were identified as only four species: Aeromonas caviae (37.26%), Aeromonas dhakensis (23.49%), Aeromonas veronii (21.54%), and Aeromonas hydrophila (13.07%). -
Aeromonas Hydrophila
P.O. Box 131375, Bryanston, 2074 Ground Floor, Block 5 Bryanston Gate, Main Road Bryanston, Johannesburg, South Africa www.thistle.co.za Tel: +27 (011) 463-3260 Fax: +27 (011) 463-3036 OR + 27 (0) 86-538-4484 e-mail : [email protected] Please read this section first The HPCSA and the Med Tech Society have confirmed that this clinical case study, plus your routine review of your EQA reports from Thistle QA, should be documented as a “Journal Club” activity. This means that you must record those attending for CEU purposes. Thistle will not issue a certificate to cover these activities, nor send out “correct” answers to the CEU questions at the end of this case study. The Thistle QA CEU No is: MT00025. Each attendee should claim THREE CEU points for completing this Quality Control Journal Club exercise, and retain a copy of the relevant Thistle QA Participation Certificate as proof of registration on a Thistle QA EQA. MICROBIOLOGY LEGEND CYCLE 28 – ORGANISM 3 Aeromonas hydrophila Aeromonas hydrophila is a heterotrophic, gram-negative, rod shaped bacterium, mainly found in areas with a warm climate. This bacterium can also be found in fresh, salt, marine, estuarine, chlorinated, and un-chlorinated water. Aeromonas hydrophila can survive in aerobic and anaerobic environments. This bacterium can digest materials such as gelatin, and hemoglobin. This bacterium is the most well known of the six species of Aeromonas. It is also highly resistant to multiple medications. Aeromonas hydrophila is resistant to chlorine, refrigeration and cold temperatures. Structure Aeromonas hydrophila are Gram-negative straight rods with rounded ends (bacilli to coccibacilli shape) usually from 0.3 to 1 µm in width, and 1 to 3 µm in length.