Wild and Cultured Edible Tunicates: a Review
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Bacteria Associated with Tunicate, Polycarpa Aurata, from Lease Sea, Maluku, Indonesia Exhibiting Anti-Multidrug Resistant Bacteria
BIODIVERSITAS ISSN: 1412-033X Volume 20, Number 4, April 2019 E-ISSN: 2085-4722 Pages: 956-964 DOI: 10.13057/biodiv/d200404 Bacteria associated with tunicate, Polycarpa aurata, from Lease Sea, Maluku, Indonesia exhibiting anti-multidrug resistant bacteria DIAH AYUNINGRUM1,5, RHESI KRISTIANA1, AYUNDA AINUN NISA2, SEPTHY KUSUMA RADJASA2, SAKTI IMAM MUCHLISSIN2,4, OCKY KARNA RADJASA2,3, AGUS SABDONO2, AGUS TRIANTO2, 1Department of Coastal Resource Management, Faculty of Fisheries and Marine Science, Universitas Diponegoro. Jl. Prof. Soedharto SH, Semarang 50275, Central Java, Indonesia 2Department of Marine Science, Faculty of Fisheries and Marine Science, Universitas Diponegoro. Jl. Prof. Soedarto, SH, Tembalang, Semarang 50275, Central Java, Indonesia. Tel.: +62-24-7474698, Fax.: +62-24-7474698, email: [email protected]. 3Directorate of Research and Community Services, Ministry of Research, Technology and Higher Education. D Building, Jl. Jenderal Sudirman Pintu Satu, Senayan, Jakarta Pusat 10279, Indonesia 4Tropical Marine Biotechnology Laboratory, Universitas Diponegoro Jl. Lingkar Utara Undip, Semarang 50275, Central Java, Indonesia 1Department of Aquatic Resource Management, Faculty of Fisheries and Marine Science, Universitas Diponegoro. Jl. Prof. Soedharto SH, Semarang 50275, Central Java, Indonesia Manuscript received: 30 January 2019. Revision accepted: 10 March 2019. Abstract. Ayuningrum D, Kristiana R, Nisa AA, Radjasa SK, Muchlissin SI, Radjasa OK, Sabdono A, Trianto A. 2019. Bacteria associated with tunicate, Polycarpa aurata, from Lease Sea, Maluku, Indonesia exhibiting anti-multidrug resistant bacteria. Biodiversitas 20: 956-964. Tunicate is a rich secondary metabolites producer with various biological activities whether as an original producer or produced by the associated microorganisms. In this study, a total of 11 tunicate specimens were identified as Polycarpa aurata with four color variations based on morphological characteristic and COI gene identification and BLAST analysis. -
Ascidian Cannibalism Correlates with Larval Behavior and Adult Distribution
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1988 Elsevier Ltd. The final published version of this manuscript is available at http://www.sciencedirect.com/science/journal/00220981 and may be cited as: Young, C. M. (1988). Ascidian cannibalism correlates with larval behavior and adult distribution. Journal of Experimental Marine Biology and Ecology, 117(1), 9-26. doi:10.1016/0022-0981(88)90068-8 J. Exp. Mar. Bioi. £Col., 1988, Vol. 117, pp. 9-26 9 Elsevier JEM 01042 Ascidian cannibalism correlates with larval behavior and adult distribution Craig M. Young Department ofLarval Ecology. Harbor Branch Oceanographic Institution, Fort Pierce, Florida. U.S.A. (Received 24 March 1987; revision received 9 December 1987; accepted 22 December 1987) Abstract: In the San Juan Islands, Washington, solitary ascidians .that occur in dense monospecific aggregations demonstrate gregarious settlement as larvae, whereas species that occur as isolated individuals do not. All gregarious species reject their own eggs and larvae as food, but nongregarious species consume conspecific eggs and larvae. Moreover, the rejection mechanism is species-specific in some cases. Correla tion analysis suggests that species specificity of the rejection response has a basis in siphon diameter, egg density, and larval size, but not in number of oral tentacles, or tentacle branching. One strongly cannibalistic species, Corella inflata Huntsman, avoids consuming its own eggs and newly released tadpoles by a unique brooding mechanism that involves floating eggs, negative geotaxis after hatching, and adult orientation. Key words: Ascidian; Cannibalism; Distribution; Larva; Settlement behavior INTRODUCTION Many sessile marine invertebrates, including filter-feeders such as mussels, oysters, barnacles and ascidians, occur in discrete, dense aggregations. -
Grebmeier, Jacqueline M., Lee W.Cooper, and Michael J
Limnol. Oceanogr., 35(S), 1990, 1 182-1195 0 1990, by the American Society of Limnology and Oceanography, Inc. Oxygen isotopic composition of bottom seawater and tunicate cellulose used as indicators of water masses in the northern Bering and Chukchi Seas Abstract -Oxygen isotopic composition of rivers, evaporated surface ocean waters, bottom seawater and tunicate cellulose were used melting glaciers, and melting sea ice can be as short-term and long-term indicators, respec- tively, of water-mass characteristics in the north- separated and water types characterized (e.g. ern Bering and Chukchi Seas. Oxygen isotopic Epstein and Mayeda 1953; Tan and Strain composition of northeastern Bering Sea waters is 1980; Bedard et al. 198 1). In contrast to the influenced by Yukon River inflows of IsO-de- variability in the surface ocean, average 180 : pleted continental water mixing with relatively 180-enriched waters contributed by the Anadyr 160 ratios for the deep (> 500 m) sea vary Current. Tunicate cellulose sampled under Alas- by < 1%~ when expressed in the conven- ka coastal water is more depleted in IsO than that tional 6 notation: collected under Bering shelf and Anadyr waters, which reflects the oxygen isotopic composition 6180 = (Rstd/R,mple- 1) X 1030/oo (1) of these waters. Tunicate cellulose collected un- der the mixed Bering shelf water displays inter- where R = 180 : l 6O and std is Standard Mean mediate 6180 values. Oxygen isotopic analyses of Ocean Water (SMOW). The low variability bottom seawater were used to determine the spa- in V80 values of waters in the deep sea has tial location and influence of continental and led to widespread use of oxygen isotopes as coastal-derived precipitation and of sea-ice for- mation on water-mass structure on the continen- a paleothermometric indicator. -
Phlebobranchia of CTAW
PHLEBOBRANCHIA PHLEBOBRANCHIA The suborder Phlebobranchia (order Enterogona) is characterised by having unpaired gonads present only on the same side of the body as the gut. As in Stolidobranchia, the body is not divided into different sections (such as thorax, abdomen and posterior abdomen) as the gut is folded up in the parietal body wall outside the pharynx and the large branchial sac occupies the whole length of the body. Usually the branchial sac (which is flat, without folds) has internal longitudinal vessels (although only vestiges remain in Agneziidae). Epicardial sacs do not persist in adults as they do in Aplousobranchia, although excretory vesicles (nephrocytes) embedded in the body wall over the gut are known to originate from the embryonic epicardium in Ascidiidae and Corellidae. Most phlebobranchs are solitary. However, Plurellidae Kott, 1973 includes both solitary and colonial forms, and Perophoridae Giard, 1872 are all colonial. Replication in Perophoridae is from ectodermal epithelium (rather than endodermal or mesodermal tissue the mesodermal tissue of the vascular stolon (rather than the endodermal tissue as in most as in Aplousobranchia). The process of replication has not been investigated in Plurellidae. Phlebobranch taxa occurring in Australia are documented in Kott (1985). Family level taxa are characterised principally by the size and form of the branchial sac including the number of branchial vessels and form of the stigmata; the form, size and position of the gonads; and the habit (colonial or solitary) of the taxon. Berrill (1950) has discussed problems in assessing the phylogeny of Perophoridae. References Berrill, N.J. (1950). The Tunicata. Ray Soc. Publs 133: 1–354 Giard, A.M. -
Temperature and Salinity Sensitivity of the Invasive Ascidian Microcosmus Exasperatus Heller, 1878
Aquatic Invasions (2016) Volume 11, Issue 1: 33–43 DOI: http://dx.doi.org/10.3391/ai.2016.11.1.04 Open Access © 2016 The Author(s). Journal compilation © 2016 REABIC Research Article Temperature and salinity sensitivity of the invasive ascidian Microcosmus exasperatus Heller, 1878 1 1,2 Lilach Raijman Nagar and Noa Shenkar * 1Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv, 69978, Israel 2The Steinhardt Museum of Natural History and National Research Center, Tel Aviv University, Tel Aviv, Israel *Corresponding author E-mail: [email protected] Received: 5 May 2015 / Accepted: 24 November 2015 / Published online: 30 December 2015 Handling editor: Vadim Panov Abstract Environmental factors, such as temperature and salinity, are known to influence distribution patterns and invasion success in ascidians. The solitary ascidian Microcosmus exasperatus Heller, 1878 has a wide global distribution and can be found in both tropical and sub-tropical waters. In the Mediterranean Sea, it is considered to be an invasive species introduced through the Suez Canal, with a restricted distribution in the eastern Mediterranean. Despite its global distribution, the environmental tolerances of this species are poorly known. We examined the effect of varying temperature and salinity on the survival of adult individuals of M. exasperatus in a laboratory setting to partially determine its environmental tolerance range. In addition, it’s global and local distribution as well as the seasonal abundance in ‘Akko Bay (northern Mediterranean coast of Israel) were examined. Field observations and laboratory experiments show that M. exasperatus is able to tolerate a temperature range of 12–30 ºC, and salinity of 37–45, but it survived poorly in salinity of 33–35 and temperatures > 32 ºC. -
Life-History Strategies of a Native Marine Invertebrate Increasingly Exposed to Urbanisation and Invasion
Temporal Currency: Life-history strategies of a native marine invertebrate increasingly exposed to urbanisation and invasion A thesis submitted in partial fulfilment of the requirements for the degree of Master of Science in Zoology University of Canterbury New Zealand Jason Suwandy 2012 Contents List of Figures ......................................................................................................................................... iii List of Tables .......................................................................................................................................... vi Acknowledgements ............................................................................................................................... vii Abstract ................................................................................................................................................ viii CHAPTER ONE - General Introduction .................................................................................................... 1 1.1 Marine urbanisation and invasion ................................................................................................ 2 1.2 Successful invasion and establishment of populations ................................................................ 4 1.3 Ascidians ....................................................................................................................................... 7 1.4 Native ascidians as study organisms ............................................................................................ -
Halocynthia Roretzi
Sekigami et al. Zoological Letters (2017) 3:17 DOI 10.1186/s40851-017-0078-3 RESEARCH ARTICLE Open Access Hox gene cluster of the ascidian, Halocynthia roretzi, reveals multiple ancient steps of cluster disintegration during ascidian evolution Yuka Sekigami1, Takuya Kobayashi1, Ai Omi1, Koki Nishitsuji2, Tetsuro Ikuta1, Asao Fujiyama3, Noriyuki Satoh2 and Hidetoshi Saiga1* Abstract Background: Hox gene clusters with at least 13 paralog group (PG) members are common in vertebrate genomes and in that of amphioxus. Ascidians, which belong to the subphylum Tunicata (Urochordata), are phylogenetically positioned between vertebrates and amphioxus, and traditionally divided into two groups: the Pleurogona and the Enterogona. An enterogonan ascidian, Ciona intestinalis (Ci), possesses nine Hox genes localized on two chromosomes; thus, the Hox gene cluster is disintegrated. We investigated the Hox gene cluster of a pleurogonan ascidian, Halocynthia roretzi (Hr) to investigate whether Hox gene cluster disintegration is common among ascidians, and if so, how such disintegration occurred during ascidian or tunicate evolution. Results: Our phylogenetic analysis reveals that the Hr Hox gene complement comprises nine members, including one with a relatively divergent Hox homeodomain sequence. Eight of nine Hr Hox genes were orthologous to Ci-Hox1, 2, 3, 4, 5, 10, 12 and 13. Following the phylogenetic classification into 13 PGs, we designated Hr Hox genes as Hox1, 2, 3, 4, 5, 10, 11/12/13.a, 11/12/13.b and HoxX. To address the chromosomal arrangement of the nine Hox genes, we performed two-color chromosomal fluorescent in situ hybridization, which revealed that the nine Hox genes are localized on a single chromosome in Hr, distinct from their arrangement in Ci. -
1471-2148-9-187.Pdf
BMC Evolutionary Biology BioMed Central Research article Open Access An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models Georgia Tsagkogeorga1,2, Xavier Turon3, Russell R Hopcroft4, Marie- Ka Tilak1,2, Tamar Feldstein5, Noa Shenkar5,6, Yossi Loya5, Dorothée Huchon5, Emmanuel JP Douzery1,2 and Frédéric Delsuc*1,2 Address: 1Université Montpellier 2, Institut des Sciences de l'Evolution (UMR 5554), CC064, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France, 2CNRS, Institut des Sciences de l'Evolution (UMR 5554), CC064, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France, 3Centre d'Estudis Avançats de Blanes (CEAB, CSIC), Accés Cala S. Francesc 14, 17300 Blanes (Girona), Spain, 4Institute of Marine Science, University of Alaska Fairbanks, Fairbanks, Alaska, USA, 5Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, 69978, Israel and 6Department of Biology, University of Washington, Seattle WA 98195, USA Email: Georgia Tsagkogeorga - [email protected]; Xavier Turon - [email protected]; Russell R Hopcroft - [email protected]; Marie-Ka Tilak - [email protected]; Tamar Feldstein - [email protected]; Noa Shenkar - [email protected]; Yossi Loya - [email protected]; Dorothée Huchon - [email protected]; Emmanuel JP Douzery - [email protected]; Frédéric Delsuc* - [email protected] * Corresponding author Published: 5 August 2009 Received: 16 October 2008 Accepted: 5 August 2009 BMC Evolutionary Biology 2009, 9:187 doi:10.1186/1471-2148-9-187 This article is available from: http://www.biomedcentral.com/1471-2148/9/187 © 2009 Tsagkogeorga et al; licensee BioMed Central Ltd. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Tsmm.Pdf 5.573 Mb
ANÀLISI DELS DESCARTAMENTS EFECTUATS PER LA FLOTA D’ARROSSEGAMENT EN EL GOLF DE LLEÓ Sandra MALLOL MARTÍNEZ ISBN: 84-689-4625-7 Dipòsit legal: GI-1170-2005 Anàlisi dels descartaments efectuats per la fl ota d’arrossegament en el Golf de Lleó Sandra Mallol i Martínez Memòria redactada per Sandra Mallol i Martínez, 2005 inscrita al programa de doctorat de Biologia Ambiental, del Departament de Ciències Ambientals, per optar al grau de Doctor en Biologia per la Universitat de Girona. Aquest treball s’ha realitzat a l’Àrea de Zoologia del Departament de Ciències Ambientals de la Universitat de Girona sota la direcció de la Dra. Margarida Casadevall Masó i el Dr. Emili García-Berthou. coberta_SMallol.indd 1 23/05/2005, 11:49 Tesi Doctoral Anàlisi dels descartaments efectuats per la flota d’arrossegament en el Golf de Lleó Memòria redactada per Sandra Mallol i Martínez, inscrita al programa de doctorat de Biologia Ambiental del Departament de Ciències Ambientals, per a optar al grau de Doctora en Biologia per la Universitat de Girona. El present treball s’ha realitzat a l’Àrea de Zoologia de la Universitat de Girona sota la codirecció de la Dra. Margarida Casadevall Masó i el Dr. Emili García-Berthou. Sandra Mallol i Martínez Vist-i-plau dels directors, Dra. Margarida Casadevall Masó Dr. Emili García-Berthou Professora titular Professor titular Àrea de Zoologia Àrea d’Ecologia Departament de Ciències Ambientals Departament de Ciències Ambientals Universitat de Girona Universitat de Girona Girona, 2005 Al meu avi Falet, per haver-me ensenyat a estimar tant la mar Agraïments Quan un arriba al final de l’odissea de la tesi es fa difícil escriure aquest apartat sobretot per la por a obliadar-te d’algú, perdoneu si es dóna el cas. -
New Perspectives on the Evolution of Protochordate Sensory and Locomotory Systems, and the Origin of Brains and Heads*
doi 10.1098/rstb.2001.0974 New perspectives on the evolution of protochordate sensory and locomotory systems, and the origin of brains and heads* Thurston C. Lacalli Biology Department, University of Saskatchewan, Saskatoon, Saskatchewan, Canada, S7N 5E2 ([email protected]) Cladistic analyses generally place tunicates close to the base of the chordate lineage, consistent with the assumption that the tunicate tail is primitively simple, not secondarily reduced from a segmented trunk. Cephalochordates (i.e. amphioxus) are segmented and resemble vertebrates in having two distinct loco- motory modes, slow for distance swimming and fast for escape, that depend on separate sets of motor neurons and muscle cells. The sense organs of both amphioxus and tunicate larvae serve essentially as navigational aids and, despite some uncertainty as to homologies, current molecular and ultrastructural data imply a close relationship between them. There are far fewer signs of modi¢cation and reduction in the amphioxus central nervous system (CNS), however, so it is arguably the closer to the ancestral condi- tion. Similarities between amphioxus and tunicate sense organs are then most easily explained if distance swimming evolved before and escape behaviour after the two lineages diverged, leaving tunicates to adopt more passive means of avoiding predation. Neither group has the kind of sense organs or sensory integration centres an organism would need to monitor predators, yet mobile predators with eyes were probably important in the early Palaeozoic. For a predator, improvements in vision and locomotion are mutually reinforcing. Both features probably evolved rapidly and together, in an `arms race'of eyes, brains and segments that left protochordates behind, and ultimately produced the vertebrate head. -
Ascidia Ceratodes (Huntsman, 1912) (Tunicata: Ascidiidae) Off the Northern Chilean Coast: New Record
Latin American Journal of Aquatic Research, 47(1): Ascidia184-189 ,ceratodes 2019 in the northern Chilean coast 1 DOI: 10.3856/vol47-issue1-fulltext-21 Short Communication Ascidia ceratodes (Huntsman, 1912) (Tunicata: Ascidiidae) off the northern Chilean coast: new record 1 2 3 Juan I. Cañete , José L. López & Erika Mutschke 1Departamento de Ciencias y Recursos Naturales, Facultad de Ciencias Universidad de Magallanes, Punta Arenas, Chile 2Departamento de Biología, Escuela de Medicina, Facultad de Ciencias de la Salud Universidad de Tarapacá, Arica, Chile 3Laboratorio Hidrobiología, Instituto de la Patagonia, Universidad de Magallanes, Punta Arenas, Chile Corresponding author: Juan I. Cañete ([email protected]) ABSTRACT. The ascidian fauna of northern Chile (18º to 25ºS) is poorly known. A member of the family Ascidiidae, Ascidia ceratodes (Huntsman, 1912), is reported in this study. We collected samples of A. ceratodes under intertidal boulders off the northern Chilean coast between Arica (18°S) and Iquique (20°S) (17 to 20°C; intertidal pool; <0.5 m depth; August, 2016). This finding verified a questionable record established by Van Name (1945) from Tocopilla (22ºS), northern Chile. This record extends the confirmed geographical distribution of A. ceratodes along of the eastern Pacific coast from British Columbia, Canada, to northern Chile. Keywords: Ascidia; warm temperate benthos; intertidal rocky shore; biodiversity; Southeastern Pacific The ascidian fauna of the Chilean coast comprises Recent surveys of ascidians biodiversity on the around 72 species. Over the last decade, our knowledge northern Chilean coast (Clarke & Castilla, 2000; about this taxon and its distribution in the Chilean coast Schories et al., 2015; Turon et al., 2016a, 2016b) did has improved (Clarke & Castilla, 2000; Sanamyan & not make any reference to members of the genus Schories, 2003; Lagger et al., 2009; Sanamyan et al., Ascidia.