Life History Strategies of Subarctic Copepods Neocalanus Flemingeriand N
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Calanus Helgolandicus Under Controlled Conditions
Helgol~inder wiss. Meeresunters. 20, 346-359 (1970) Cultivation of Calanus helgolandicus under controlled conditions G.-A. PAFFENH6FER Institute of Marine Resources, University of California, San Diego; La Jolla, California, USA KURZFASSUNG: Kultlvierung von Calanus helgolandicus unter kontrollierten Bedingungen. Der planktonische Copepode Calanus helgolandicus (Calanoida) wurde im Labor vom Ei bis zum Adultus in bewegten Kulturen bei 15.0 C aufgezogen. Die kettenbildenden Diatomeen Chaetoceros curvisetus, Skeletonema costatum und Lauderia borealis sowie der Dinoflagellat Gymnodinium splendens wurden als Nahrung angeboten. Die Nahrungskonzentrationen, die zum Tell den Phytoplanktonkonzentrationen im Pazifischen Ozean an der Ktiste Siidkalifor- niens entsprachen, lagen zwischen 28 ~g und 800 #g organischem C/I. In Abh~ingigkeit yon Nahrungsquallt~it und Nahrungskonzentration wurden folgende Ergebnisse erzielt: Die Mor- talit~it yon C. heIgolandicus w~.hrend der gesamten Entwicklung vom geschliipf~en Naupllus bis zum Adultus lag zwischen 2,3 °/0 und 58,2 o/0. Die Zeitspanne yore Schliipfen bis zum adul- ten Stadium wiihrte i8 bis 54 Tage. Das Geschlechterverh~imis in verschiedenen KuIturen im Labor aufgezogener Tiere schwankte erhebli&. Der h6chste Prozentsatz yon ~ (~ (ca. 25 %) wurde erhalten, als L. boreal# beziehungswelse G. splendens gef~ittert wurden. Die L~.nge der ~ stand in direktem Verh~ilmis zur angebotenen Nahrungsmenge und lag zwischen 3,03 mm und 3,84 ram. Im Labor aufgezogene mad befruchtete ~ legten durchschnittlich 1991 Eier pro ~ bei einer Schlilpfrate yon 84 °/0. Spermatophorentragende ~ aus dem Pazifischen Ozean legten durchschnittllch je 2267 Eier, die eine Schltipfrate yon 77 % aufwiesen. Die Er- gebnisse beweisen, dab es m/Sglich ist, Calanus helgolandicus ohne Schwierlgkeit im Labor auf- zuziehen. -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
A Systematic and Experimental Analysis of Their Genes, Genomes, Mrnas and Proteins; and Perspective to Next Generation Sequencing
Crustaceana 92 (10) 1169-1205 CRUSTACEAN VITELLOGENIN: A SYSTEMATIC AND EXPERIMENTAL ANALYSIS OF THEIR GENES, GENOMES, MRNAS AND PROTEINS; AND PERSPECTIVE TO NEXT GENERATION SEQUENCING BY STEPHANIE JIMENEZ-GUTIERREZ1), CRISTIAN E. CADENA-CABALLERO2), CARLOS BARRIOS-HERNANDEZ3), RAUL PEREZ-GONZALEZ1), FRANCISCO MARTINEZ-PEREZ2,3) and LAURA R. JIMENEZ-GUTIERREZ1,5) 1) Sea Science Faculty, Sinaloa Autonomous University, Mazatlan, Sinaloa, 82000, Mexico 2) Coelomate Genomic Laboratory, Microbiology and Genetics Group, Industrial University of Santander, Bucaramanga, 680007, Colombia 3) Advanced Computing and a Large Scale Group, Industrial University of Santander, Bucaramanga, 680007, Colombia 4) Catedra-CONACYT, National Council for Science and Technology, CDMX, 03940, Mexico ABSTRACT Crustacean vitellogenesis is a process that involves Vitellin, produced via endoproteolysis of its precursor, which is designated as Vitellogenin (Vtg). The Vtg gene, mRNA and protein regulation involve several environmental factors and physiological processes, including gonadal maturation and moult stages, among others. Once the Vtg gene, mRNAs and protein are obtained, it is possible to establish the relationship between the elements that participate in their regulation, which could either be species-specific, or tissue-specific. This work is a systematic analysis that compares the similarities and differences of Vtg genes, mRNA and Vtg between the crustacean species reported in databases with respect to that obtained from the transcriptome of Callinectes arcuatus, C. toxotes, Penaeus stylirostris and P. vannamei obtained with MiSeq sequencing technology from Illumina. Those analyses confirm that the Vtg obtained from selected species will serve to understand the process of vitellogenesis in crustaceans that is important for fisheries and aquaculture. RESUMEN La vitelogénesis de los crustáceos es un proceso que involucra la vitelina, producida a través de la endoproteólisis de su precursor llamado Vitelogenina (Vtg). -
Diel and Ontogenetic Variations in Vertical Distributions of Large Grazing Copepods During the Spring Phytoplankton Title Bloom in the Oyashio Region
Diel and ontogenetic variations in vertical distributions of large grazing copepods during the spring phytoplankton Title bloom in the Oyashio region Author(s) Yamaguchi, Atsushi; Onishi, Yuka; Kawai, Momoka; Omata, Aya; Kaneda, Mariko; Ikeda, Tsutomu Deep Sea Research Part II: Topical Studies in Oceanography, 57(17-18), 1691-1702 Citation https://doi.org/10.1016/j.dsr2.2010.03.013 Issue Date 2010-09 Doc URL http://hdl.handle.net/2115/43807 Type article (author version) File Information DSR2-57-17-18_1691-1702.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP 1 Diel and ontogenetic variations in vertical distributions of large grazing copepods 2 during the spring phytoplankton bloom in the Oyashio region 3 Atsushi Yamaguchi*, Yuka Onishi, Momoka Kawai, Aya Omata, Mariko Kaneda, 4 Tsutomu Ikeda 5 Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1 Minato, Hakodate, 6 Hokkaido 041-8611, Japan 7 *Corresponding author. 8 Tel: +81-138-40-5543 9 Fax: +81-138-40-5542 10 E-mail: [email protected] 1 11 Abstract 12 Short-term changes in vertical distributions of copepods during the spring 13 phytoplankton bloom were analyzed based on day and night vertically stratified 14 sampling (9 strata between 0-1000 m) with a fine-mesh (60 µm) VMPS in the Oyashio 15 region on five occasions: 8 March, 5, 11, 23 and 29 April 2007. Responses to the 16 bloom were varied and species-specific. Eucalanus bungii C3-C6 were resting around 17 400 m on 8 March. They had aroused from rest by 5 April, more completely for C6F 18 than for C3-C4. -
Fractal Distribution of an Oceanic Copepod Neocalanus Cristatus in the Subarctic Pacific
Journal of Oceanography Vol. 51, pp. 261 to 266. 1995 Fractal Distribution of an Oceanic Copepod Neocalanus cristatus in the Subarctic Pacific ATSUSHI TSUDA Ocean Research Institute, University of Tokyo 1-15-1, Minamidai, Nakano, Tokyo 164, Japan (Received 13 April 1994; in revised form 28 June 1994; accepted 30 August 1994) Horizontal distribution of the copepod Neocalanus cristatus was shown to be fractal on the scale between tens of meters and over 100 km. The fractal dimensions ranged between 1.68–1.89, significantly higher than those of oceanic turbulence and phytoplankton distribution. 1. Introduction Heterogeneity in the horizontal distribution of zooplankton has been recognized for many years (e.g. Hardy, 1936). The phenomenon, however, has seldom been described precisely, although zooplankton patchiness is relevant to many aspects of biological oceanography. Recent studies reveal that copepod patches do not exhibit characteristic lengths (Mackas and Boyd, 1979; Tsuda et al., 1993) and that the patterns of copepod distribution are self-similar and independent of the scale of observation (Tsuda et al., 1993). These findings suggest that copepod distributions may be fractal. Mandelbrot (1967) introduced the concept of fractals for temporally or spatially irregular phenomena which show self-similarities over a wide range of scales. Many fractal objects have been found in nature (Mandelbrot, 1982), and the theory has been applied to some ecological studies (Morse et al., 1985; Pennycuick and Kline, 1986; Dicke and Burrough, 1988; Sugihara and May, 1990; McKinney and Frederick, 1992). In the oceans, environmental turbulence itself has fractal facets in many aspects (Mandelbrot, 1982; Sreenivasan and Meneveau, 1986). -
Associations Between North Pacific Right Whales and Their Zooplanktonic Prey in the Southeastern Bering Sea
Vol. 490: 267–284, 2013 MARINE ECOLOGY PROGRESS SERIES Published September 17 doi: 10.3354/meps10457 Mar Ecol Prog Ser FREEREE ACCESSCCESS Associations between North Pacific right whales and their zooplanktonic prey in the southeastern Bering Sea Mark F. Baumgartner1,*, Nadine S. J. Lysiak1, H. Carter Esch1, Alexandre N. Zerbini2, Catherine L. Berchok2, Phillip J. Clapham2 1Biology Department, Woods Hole Oceanographic Institution, 266 Woods Hole Road, MS #33, Woods Hole, Massachusetts 02543, USA 2National Marine Mammal Laboratory, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, Washington 98115, USA ABSTRACT: Due to the seriously endangered status of North Pacific right whales Eubalaena japonica, an improved understanding of the environmental factors that influence the species’ distribution and occurrence is needed to better assess the effects of climate change and industrial activities on the population. Associations among right whales, zooplankton, and the physical envi- ronment were examined in the southeastern Bering Sea during the summers of 2008 and 2009. Sampling with nets, an optical plankton counter, and a video plankton recorder in proximity to whales as well as along cross-isobath surveys indicated that the copepod Calanus marshallae is the primary prey of right whales in this region. Acoustic detections of right whales from sonobuoys deployed during the cross-isobath surveys were strongly associated with C. marshallae abun- dance, and peak abundance estimates of C. marshallae in 2.5 m depth strata near a tagged right whale ranged as high as 106 copepods m−3. The smaller Pseudocalanus spp. was higher in abun- dance than C. marshallae in proximity to right whales, but significantly lower in biomass. -
Seasonal Growth and Lipid Storage of the Circumgiobal, Subantarctic Copepod, Neocalanus Tonsus (Brady)
Deep-Sea Research, Vol. 36, No. 9, pp, 1309-1326, 1989. 0198-0149/89$3.00 + 0.00 Printed in Great Britain. ~) 1989 PergamonPress pie. Seasonal growth and lipid storage of the circumgiobal, subantarctic copepod, Neocalanus tonsus (Brady) MARK D. OHMAN,* JANET M. BRADFORDt and JOHN B. JILLETr~ (Received 20 January 1988; in revised form 14 April 1989; accepted 24 April 1989) Abstraet--Neocalanus tonsus (Brady) was sampled between October 1984 and September 1985 in the upper 1000 m of the water column off southeastern New Zealand. The apparent spring growth increment of copepodid stage V (CV) differed depending upon the constituent con- sidered: dry mass increased 208 Ixg, carbon 162 Ixg, wax esters 143 Itg, but nitrogen only 5 ltg. Sterols and phospholipids remained relatively constant over this interval. Wax esters were consistently the dominant lipid class present in CV's, increasing seasonally from 57 to 90% of total lipids. From spring to winter, total lipid content of CV's increased from 22 to 49% of dry mass. Nitrogen declined from 10.9 to 5.4% of CV dry mass as storage compounds (wax esters) increased in importance relative to structural compounds. Egg lipids were 66% phospholipids. Upon first appearance of males and females in deep water in winter, lipid content and composition did not differ from co-occurring CV's, confirming the importance of lipids rather than particulate food as an energy source for deep winter reproduction of this species. Despite contrasting life histories, N. tonsus and subarctic Pacific Neocalanus plumchrus CV's share high lipid content, a predominance of wax esters over triacylglycerols as storage lipids, and similar wax ester fatty acid and fatty alcohol composition. -
Foraging Radii and Energetics of Least Auklets (Aethia Pusilla) Breeding on Three Bering Sea Islands
647 Foraging Radii and Energetics of Least Auklets (Aethia pusilla) Breeding on Three Bering Sea Islands Bryan S. Obst1·* Robert W. Russell2·t 2 George L. Hunt, Jr. ·; Zoe A. Eppler·§ Nancy M. Harrison2·ll 1Departmem of Biology, University of California, Los Angeles, California 90024; 2Depanment of Ecology and Evolutionary Biology, University of California, Irvine, California 92717 Accepted 11/18/94 Abstract We studied the relationship between the foraging radius and energy economy of least auklets (Aethia pusilla) breeding in colonies on three islands in the Bering Sea (St. Lawrence, St. Matthew, and St. George Islands). The distan:ce to which auklets commuted on foraging trips varied by more than an order of magnitude (5-56 km), but mean field metabolic rate (FMR) did not vary significantly among birds from the three islands. These observations indicate that allocation to various compartments of time and energy budgets is flexible and suggest that least auklets may have a preferred level ofdaily energy expenditure that is simi lar across colonies. We modeled the partitioning of energy to various activities and hypothesize that the added cost of commuting incurred by auktets from St. Lawrence Island (foraging radius, 56 km) was offiet by reduced energy costs while foraging at sea. Data on bird diets and prey abundances indicated that aukletsfrom St. Lawrence Island fed on larger, more energy-rich copepods than did aukletsfrom St. Matthew island (foraging radius, 5 km) but that depth-aver aged prey density did not differ significantly between the birds' principal forag ing areas. However, previous studies have indicated that zooplankton abun dance is vertically compressed into near-surface layers in stratified waters off St. -
A Comparison of Copepoda (Order: Calanoida, Cyclopoida, Poecilostomatoida) Density in the Florida Current Off Fort Lauderdale, Florida
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 6-1-2010 A Comparison of Copepoda (Order: Calanoida, Cyclopoida, Poecilostomatoida) Density in the Florida Current Off orF t Lauderdale, Florida Jessica L. Bostock Nova Southeastern University, [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Jessica L. Bostock. 2010. A Comparison of Copepoda (Order: Calanoida, Cyclopoida, Poecilostomatoida) Density in the Florida Current Off Fort Lauderdale, Florida. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, Oceanographic Center. (92) https://nsuworks.nova.edu/occ_stuetd/92. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Nova Southeastern University Oceanographic Center A Comparison of Copepoda (Order: Calanoida, Cyclopoida, Poecilostomatoida) Density in the Florida Current off Fort Lauderdale, Florida By Jessica L. Bostock Submitted to the Faculty of Nova Southeastern University Oceanographic Center in partial fulfillment of the requirements for the degree of Master of Science with a specialty in: Marine Biology Nova Southeastern University June 2010 1 Thesis of Jessica L. Bostock Submitted in Partial Fulfillment of the Requirements for the Degree of Masters of Science: Marine Biology Nova Southeastern University Oceanographic Center June 2010 Approved: Thesis Committee Major Professor :______________________________ Amy C. Hirons, Ph.D. Committee Member :___________________________ Alexander Soloviev, Ph.D. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Life Cycle and Distribution of Calanus Finmarchicus in Deep Basins on the Nova Scotia Shelf and Seasonal Changes in Calanus Spp
MARINE ECOLOGY PROGRESS SERIES Vol. 66: 225-237, 1990 Published September 6 Mar. Ecol. Prog. Ser. Life cycle and distribution of Calanus finmarchicus in deep basins on the Nova Scotia shelf and seasonal changes in Calanus spp. ' Biological Sciences Branch, Department of Fisheries and Oceans. Bedford Institute of Oceanography, PO Box 1006, Dartmouth, Nova Scotia, Canada B2Y 4A2 Physical/Chemical Sciences Branch, Department of Fisheries and Oceans. Bedford Institute of Oceanography, PO Box 1006, Dartmouth. Nova Scotia. Canada B2Y 4A2 ABSTRACT: The deep basins on the Nova Scotia shelf contain high concentrations of Calanus finmarchicus, C. glacialis, and C. hyperboreus at depths below 200 m. From May to late fall these were as high as 20 000 m-3. The dominant specles by numbers was C. finmarchicus; however, its biomass was equalled or exceeded by C. hyperboreus. The life cycle of C. finmarchicus in the region of 2 of the largest basins showed that breeding started late in winter with a peak in April. High concentrations of Calanus suggested that the basins had higher levels of C. finmarchicus production than the adjacent shelf with mean depths less than 100 m. All 3 species of Calanus started to accumulate below 200 m in May as Stages CIV and CV C. glacialisand C. hyperboreusdid not reproduce in significant numbers on the NW half of the shelf but did accumulate in the basins as they were advected from the NE shelf region. Resting stages of Calanus resided at depths below 200 m in water at between 8.5 and 11 "C for an estimated 7 to 8 mo. -
Bioscien Ceslibr Aryunive Rsityof Alaskaf Airbank S
Early life history of Metridia pacifica brodsky (Copepoda: Calanoida) from the southeastern Bering Sea and Gulf of Alaska Item Type Thesis Authors Pinchuk, Alexei I. Download date 07/10/2021 06:44:04 Link to Item http://hdl.handle.net/11122/5039 EARLY LIFE HISTORY OF METRIDIA PACIFICA BRODSKY, (COPEPODA: CALONIDA) FORM THE SOUTHEASTERN BERING SEA AND GULF OF ALASKA By: Alexei I. Pincuck BIOSCIENCES LIBRARYUNIVERSITY OF ALASKA FAIRBANKS EARLY LIFE HISTORY OF METRIDIA PACIFICA BRODSKY, (COPEPODA: CALANOIDA) FROM THE SOUTHEASTERN BERING SEA AND GULF OF ALASKA By Alexei I. Pinchuk RECOMMENDED: SjLiSitr Advisory Committee Chair /JjrUlsiA*- C i Program Head APPPROVED: Dean, School of Fisheries and Ocean Sciences Dean of the Graduate School Date EARLY LIFE HISTORY OF METRIDIA PACIFICA BRODSKY, (COPEPODA CALANOIDA) FROM THE SOUTHEASTERN BERING SEA AND GULF OF ALASKA A THESIS Presented to the Faculty of the University of Alaska Fairbanks in Partial Fulfillment of the Requirements for the'Degree of MASTER OF SCIENCE By Alexei I, Pinchuk Fairbanks, Alaska BIOSCI August 1997 QL 444 €72 P56 1997 BIOSCIENCES LIBRARY 3 ABSTRACT The ontogenetic morphological changes of naupliar stages of Metrldia pacifica, an important prey taxon for larval walleye pollock, were described to facilitate their identification from field samples and to clarify some uncertainties in existing descriptions of co-occurring genera. Clutch sizes and sperm storage potential were determined for females captured from the southeastern Bering Sea and Gulf of Alaska. None of the females produced more than one egg clutch in captivity. The mean clutch size was 12-13 eggs.d-1 for females from both sites and there was no relationship between body size and number of eggs per clutch or egg diameter, Intermolt periods for the egg through N IV stages were 4 9-120 hours for animals reared at 3°C, 33-69 hours at 6°C and 27-74 hours at 9°C.