Automatic Synthesis of Parallel Unix Commands and Pipelines with Kumquat
Total Page:16
File Type:pdf, Size:1020Kb
Load more
										Recommended publications
									
								- 
												  Software Developement Tools Introduction to Software BuildingSoftware Developement Tools Introduction to software building SED & friends Outline 1. an example 2. what is software building? 3. tools 4. about CMake SED & friends – Introduction to software building 2 1 an example SED & friends – Introduction to software building 3 - non-portability: works only on a Unix systems, with mpicc shortcut and MPI libraries and headers installed in standard directories - every build, we compile all files - 0 level: hit the following line: mpicc -Wall -o heat par heat par.c heat.c mat utils.c -lm - 0.1 level: write a script (bash, csh, Zsh, ...) • drawbacks: Example • we want to build the parallel program solving heat equation: SED & friends – Introduction to software building 4 - non-portability: works only on a Unix systems, with mpicc shortcut and MPI libraries and headers installed in standard directories - every build, we compile all files - 0.1 level: write a script (bash, csh, Zsh, ...) • drawbacks: Example • we want to build the parallel program solving heat equation: - 0 level: hit the following line: mpicc -Wall -o heat par heat par.c heat.c mat utils.c -lm SED & friends – Introduction to software building 4 - non-portability: works only on a Unix systems, with mpicc shortcut and MPI libraries and headers installed in standard directories - every build, we compile all files • drawbacks: Example • we want to build the parallel program solving heat equation: - 0 level: hit the following line: mpicc -Wall -o heat par heat par.c heat.c mat utils.c -lm - 0.1 level: write a script (bash, csh, Zsh, ...) SED
- 
												  Linux Commands Cheat SheetLINUX COMMANDS CHEAT SHEET System File Permission uname => Displays Linux system information chmod octal filename => Change file permissions of the file to octal uname -r => Displays kernel release information Example uptime => Displays how long the system has been running including chmod 777 /data/test.c => Set rwx permissions to owner, group and everyone (every- load average one else who has access to the server) hostname => Shows the system hostname chmod 755 /data/test.c => Set rwx to the owner and r_x to group and everyone hostname -i => Displays the IP address of the system chmod 766 /data/test.c => Sets rwx for owner, rw for group and everyone last reboot => Shows system reboot history chown owner user-file => Change ownership of the file date => Displays current system date and time chown owner-user: owner-group => Change owner and group owner of the file timedatectl => Query and change the System clock file_name chown owner-user:owner-group- => Change owner and group owner of the directory cal => Displays the current calendar month and day directory w => Displays currently logged in users in the system whoami => Displays who you are logged in as Network finger username => Displays information about the user ip addr show => Displays IP addresses and all the network interfaces Hardware ip address add => Assigns IP address 192.168.0.1 to interface eth0 192.168.0.1/24 dev eth0 dmesg => Displays bootup messages ifconfig => Displays IP addresses of all network interfaces cat /proc/cpuinfo => Displays more information about CPU e.g model, model name, cores, vendor id ping host => ping command sends an ICMP echo request to establish a connection to server / PC cat /proc/meminfo => Displays more information about hardware memory e.g.
- 
												  Chapter 19 RECOVERING DIGITAL EVIDENCE from LINUX SYSTEMSChapter 19 RECOVERING DIGITAL EVIDENCE FROM LINUX SYSTEMS Philip Craiger Abstract As Linux-kernel-based operating systems proliferate there will be an in evitable increase in Linux systems that law enforcement agents must process in criminal investigations. The skills and expertise required to recover evidence from Microsoft-Windows-based systems do not neces sarily translate to Linux systems. This paper discusses digital forensic procedures for recovering evidence from Linux systems. In particular, it presents methods for identifying and recovering deleted files from disk and volatile memory, identifying notable and Trojan files, finding hidden files, and finding files with renamed extensions. All the procedures are accomplished using Linux command line utilities and require no special or commercial tools. Keywords: Digital evidence, Linux system forensics !• Introduction Linux systems will be increasingly encountered at crime scenes as Linux increases in popularity, particularly as the OS of choice for servers. The skills and expertise required to recover evidence from a Microsoft- Windows-based system, however, do not necessarily translate to the same tasks on a Linux system. For instance, the Microsoft NTFS, FAT, and Linux EXT2/3 file systems work differently enough that under standing one tells httle about how the other functions. In this paper we demonstrate digital forensics procedures for Linux systems using Linux command line utilities. The ability to gather evidence from a running system is particularly important as evidence in RAM may be lost if a forensics first responder does not prioritize the collection of live evidence. The forensic procedures discussed include methods for identifying and recovering deleted files from RAM and magnetic media, identifying no- 234 ADVANCES IN DIGITAL FORENSICS tables files and Trojans, and finding hidden files and renamed files (files with renamed extensions.
- 
												  “Linux at the Command Line” Don Johnson of BU IS&T We’Ll Start with a Sign in Sheet“Linux at the Command Line” Don Johnson of BU IS&T We’ll start with a sign in sheet. We’ll end with a class evaluation. We’ll cover as much as we can in the time allowed; if we don’t cover everything, you’ll pick it up as you continue working with Linux. This is a hands-on, lab class; ask questions at any time. Commands for you to type are in BOLD The Most Common O/S Used By BU Researchers When Working on a Server or Computer Cluster Linux is a Unix clone begun in 1991 and written from scratch by Linus Torvalds with assistance from a loosely-knit team of hackers across the Net. 64% of the world’s servers run some variant of Unix or Linux. The Android phone and the Kindle run Linux. a set of small Linux is an O/S core programs written by written by Linus Richard Stallman and Torvalds and others others. They are the AND GNU utilities. http://www.gnu.org/ Network: ssh, scp Shells: BASH, TCSH, clear, history, chsh, echo, set, setenv, xargs System Information: w, whoami, man, info, which, free, echo, date, cal, df, free Command Information: man, info Symbols: |, >, >>, <, ;, ~, ., .. Filters: grep, egrep, more, less, head, tail Hotkeys: <ctrl><c>, <ctrl><d> File System: ls, mkdir, cd, pwd, mv, touch, file, find, diff, cmp, du, chmod, find File Editors: gedit, nedit You need a “xterm” emulation – software that emulates an “X” terminal and that connects using the “SSH” Secure Shell protocol. ◦ Windows Use StarNet “X-Win32:” http://www.bu.edu/tech/support/desktop/ distribution/xwindows/xwin32/ ◦ Mac OS X “Terminal” is already installed Why? Darwin, the system on which Apple's Mac OS X is built, is a derivative of 4.4BSD-Lite2 and FreeBSD.
- 
												  Unix Tools 2Unix Tools 2 Jeff Freymueller Outline § Variables as a collec9on of words § Making basic output and input § A sampler of unix tools: remote login, text processing, slicing and dicing § ssh (secure shell – use a remote computer!) § grep (“get regular expression”) § awk (a text processing language) § sed (“stream editor”) § tr (translator) § A smorgasbord of examples Variables as a collec9on of words § The shell treats variables as a collec9on of words § set files = ( file1 file2 file3 ) § This sets the variable files to have 3 “words” § If you want the whole variable, access it with $files § If you want just the second word, use $files[2] § The shell doesn’t count characters, only words Basic output: echo and cat § echo string § Writes a line to standard output containing the text string. This can be one or more words, and can include references to variables. § echo “Opening files” § echo “working on week $week” § echo –n “no carriage return at the end of this” § cat file § Sends the contents of a file to standard output Input, Output, Pipes § Output to file, vs. append to file. § > filename creates or overwrites the file filename § >> filename appends output to file filename § Take input from file, or from “inline input” § < filename take all input from file filename § <<STRING take input from the current file, using all lines un9l you get to the label STRING (see next slide for example) § Use a pipe § date | awk '{print $1}' Example of “inline input” gpsdisp << END • Many programs, especially Okmok2002-2010.disp Okmok2002-2010.vec older ones, interac9vely y prompt you to enter input Okmok2002-2010.gmtvec • You can automate (or self- y Okmok2002-2010.newdisp document) this by using << Okmok2002_mod.stacov • Standard input is set to the 5 contents of this file 5 Okmok2010.stacov between << END and END 5 • You can use any label, not 5 just “END”.
- 
												  The Linux Command LineThe Linux Command Line Fifth Internet Edition William Shotts A LinuxCommand.org Book Copyright ©2008-2019, William E. Shotts, Jr. This work is licensed under the Creative Commons Attribution-Noncommercial-No De- rivative Works 3.0 United States License. To view a copy of this license, visit the link above or send a letter to Creative Commons, PO Box 1866, Mountain View, CA 94042. A version of this book is also available in printed form, published by No Starch Press. Copies may be purchased wherever fine books are sold. No Starch Press also offers elec- tronic formats for popular e-readers. They can be reached at: https://www.nostarch.com. Linux® is the registered trademark of Linus Torvalds. All other trademarks belong to their respective owners. This book is part of the LinuxCommand.org project, a site for Linux education and advo- cacy devoted to helping users of legacy operating systems migrate into the future. You may contact the LinuxCommand.org project at http://linuxcommand.org. Release History Version Date Description 19.01A January 28, 2019 Fifth Internet Edition (Corrected TOC) 19.01 January 17, 2019 Fifth Internet Edition. 17.10 October 19, 2017 Fourth Internet Edition. 16.07 July 28, 2016 Third Internet Edition. 13.07 July 6, 2013 Second Internet Edition. 09.12 December 14, 2009 First Internet Edition. Table of Contents Introduction....................................................................................................xvi Why Use the Command Line?......................................................................................xvi
- 
												  Useful Commands in Linux and Other Tools for Quality ControlUseful commands in Linux and other tools for quality control Ignacio Aguilar INIA Uruguay 05-2018 Unix Basic Commands pwd show working directory ls list files in working directory ll as before but with more information mkdir d make a directory d cd d change to directory d Copy and moving commands To copy file cp /home/user/is . To copy file directory cp –r /home/folder . to move file aa into bb in folder test mv aa ./test/bb To delete rm yy delete the file yy rm –r xx delete the folder xx Redirections & pipe Redirection useful to read/write from file !! aa < bb program aa reads from file bb blupf90 < in aa > bb program aa write in file bb blupf90 < in > log Redirections & pipe “|” similar to redirection but instead to write to a file, passes content as input to other command tee copy standard input to standard output and save in a file echo copy stream to standard output Example: program blupf90 reads name of parameter file and writes output in terminal and in file log echo par.b90 | blupf90 | tee blup.log Other popular commands head file print first 10 lines list file page-by-page tail file print last 10 lines less file list file line-by-line or page-by-page wc –l file count lines grep text file find lines that contains text cat file1 fiel2 concatenate files sort sort file cut cuts specific columns join join lines of two files on specific columns paste paste lines of two file expand replace TAB with spaces uniq retain unique lines on a sorted file head / tail $ head pedigree.txt 1 0 0 2 0 0 3 0 0 4 0 0 5 0 0 6 0 0 7 0 0 8 0 0 9 0 0 10
- 
												  Basic Plotting Codes in RThe Basics of R for Windows We will use the data set timetrial.repeated.dat to learn some basic code in R for Windows. Commands will be shown in a different font, e.g., read.table, after the command line prompt, shown here as >. After you open R, type your commands after the prompt in what is called the Console window. Do not type the prompt, just the command. R stores the variables you create in a working directory. From the File menu, you need to first change the working directory to the directory where your data are stored. 1. Reading in data files Download the data file from www.biostat.umn.edu/~lynn/correlated.html to your local disk directory, go to File -> Change Directory to select that directory, and then read the data in: > contact = read.table(file="timetrial.repeated.dat", header=T) Note: if the first row of the data file had data instead of variable names, you would need to use header=F in the read.table command. Now you have named the data set contact, which you can then see in R just by typing its name: > contact or you can look at, for example, just the first 10 rows of the data set: > contact[1:10,] time sex age shape trial subj 1 2.68 M 31 Box 1 1 2 4.14 M 31 Box 2 1 3 7.22 M 31 Box 3 1 4 8.00 M 31 Box 4 1 5 7.09 M 30 Box 1 2 6 8.55 M 30 Box 2 2 7 8.79 M 30 Box 3 2 8 9.68 M 30 Box 4 2 9 6.05 M 30 Box 1 3 10 6.25 M 30 Box 2 3 This data set has 6 variables, one each in a column, where sex and shape are character valued.
- 
												  PS TEXT EDIT Reference Manual Is Designed to Give You a Complete Is About Overview of TEDITInformation Management Technology Library PS TEXT EDIT™ Reference Manual Abstract This manual describes PS TEXT EDIT, a multi-screen block mode text editor. It provides a complete overview of the product and instructions for using each command. Part Number 058059 Tandem Computers Incorporated Document History Edition Part Number Product Version OS Version Date First Edition 82550 A00 TEDIT B20 GUARDIAN 90 B20 October 1985 (Preliminary) Second Edition 82550 B00 TEDIT B30 GUARDIAN 90 B30 April 1986 Update 1 82242 TEDIT C00 GUARDIAN 90 C00 November 1987 Third Edition 058059 TEDIT C00 GUARDIAN 90 C00 July 1991 Note The second edition of this manual was reformatted in July 1991; no changes were made to the manual’s content at that time. New editions incorporate any updates issued since the previous edition. Copyright All rights reserved. No part of this document may be reproduced in any form, including photocopying or translation to another language, without the prior written consent of Tandem Computers Incorporated. Copyright 1991 Tandem Computers Incorporated. Contents What This Book Is About xvii Who Should Use This Book xvii How to Use This Book xvii Where to Go for More Information xix What’s New in This Update xx Section 1 Introduction to TEDIT What Is PS TEXT EDIT? 1-1 TEDIT Features 1-1 TEDIT Commands 1-2 Using TEDIT Commands 1-3 Terminals and TEDIT 1-3 Starting TEDIT 1-4 Section 2 TEDIT Topics Overview 2-1 Understanding Syntax 2-2 Note About the Examples in This Book 2-3 BALANCED-EXPRESSION 2-5 CHARACTER 2-9 058059 Tandem Computers
- 
												  Attitudes Toward DisabilitySchool of Psychological Science Attitudes Toward Disability: The Relationship Between Attitudes Toward Disability and Frequency of Interaction with People with Disabilities (PWD) # Jennifer Kim, Taylor Locke, Emily Reed, Jackie Yates, Nicholas Zike, Mariah Es?ll, BridgeBe Graham, Erika Frandrup, Kathleen Bogart, PhD, Sam Logan, PhD, Chris?na Hospodar Introduc)on Methods Con)nued Conclusion The social and medical models of disability are sets of underlying assump?ons explaining Parcipants Connued Suppor?ng our hypothesis, the medical and social models par?ally mediated the people's beliefs about the causes and implicaons of disability. • 7.9% iden?fied as Hispanic/Lano & 91.5% did not iden?fy as Hispanic/Lano relaonship between contact and atudes towards PWD. • 2.6% iden?fied as Black/African American, 1.7% iden?fied as American Indian or Alaska • Compared to the social model, the medical model was more strongly associated • The medical model is the predominant model in the United States that is associated Nave, 23.3% iden?fied as Asian, 2.2% iden?fied as Nave Hawaiian or Pacific Islander, with contact and atudes. with the belief that disability is an undesirable status that needs to be cured (Darling & 76.7% iden?fied as White, & 2.1% iden?fied as Other • This suggests that more contact with PWD can help decrease medical model beliefs Heckert, 2010). This model focuses on the diagnosis, treatment and curave efforts • Average frequency of contact was about once a month in general, but may be slightly less effec?ve at promo?ng the social model beliefs. related to disability.
- 
												  Configuration and Administration of Networking for Fedora 23Fedora 23 Networking Guide Configuration and Administration of Networking for Fedora 23 Stephen Wadeley Networking Guide Draft Fedora 23 Networking Guide Configuration and Administration of Networking for Fedora 23 Edition 1.0 Author Stephen Wadeley [email protected] Copyright © 2015 Red Hat, Inc. and others. The text of and illustrations in this document are licensed by Red Hat under a Creative Commons Attribution–Share Alike 3.0 Unported license ("CC-BY-SA"). An explanation of CC-BY-SA is available at http://creativecommons.org/licenses/by-sa/3.0/. The original authors of this document, and Red Hat, designate the Fedora Project as the "Attribution Party" for purposes of CC-BY-SA. In accordance with CC-BY-SA, if you distribute this document or an adaptation of it, you must provide the URL for the original version. Red Hat, as the licensor of this document, waives the right to enforce, and agrees not to assert, Section 4d of CC-BY-SA to the fullest extent permitted by applicable law. Red Hat, Red Hat Enterprise Linux, the Shadowman logo, JBoss, MetaMatrix, Fedora, the Infinity Logo, and RHCE are trademarks of Red Hat, Inc., registered in the United States and other countries. For guidelines on the permitted uses of the Fedora trademarks, refer to https://fedoraproject.org/wiki/ Legal:Trademark_guidelines. Linux® is the registered trademark of Linus Torvalds in the United States and other countries. Java® is a registered trademark of Oracle and/or its affiliates. XFS® is a trademark of Silicon Graphics International Corp. or its subsidiaries in the United States and/or other countries.
- 
												![Arxiv:1802.08979V2 [Cs.CL] 2 Mar 2018 Parsing Benchmarks (Dahl Et Al., 1994; Popescu Et Al., 2003)](https://docslib.b-cdn.net/cover/1364/arxiv-1802-08979v2-cs-cl-2-mar-2018-parsing-benchmarks-dahl-et-al-1994-popescu-et-al-2003-1021364.webp)  Arxiv:1802.08979V2 [Cs.CL] 2 Mar 2018 Parsing Benchmarks (Dahl Et Al., 1994; Popescu Et Al., 2003)NL2Bash: A Corpus and Semantic Parser for Natural Language Interface to the Linux Operating System Xi Victoria Lin*, Chenglong Wang, Luke Zettlemoyer, Michael D. Ernst Salesforce Research, University of Washington, University of Washington, University of Washington [email protected], fclwang,lsz,[email protected] Abstract We present new data and semantic parsing methods for the problem of mapping English sentences to Bash commands (NL2Bash). Our long-term goal is to enable any user to perform operations such as file manipulation, search, and application-specific scripting by simply stating their goals in English. We take a first step in this domain, by providing a new dataset of challenging but commonly used Bash commands and expert-written English descriptions, along with baseline methods to establish performance levels on this task. Keywords: Natural Language Programming, Natural Language Interface, Semantic Parsing 1. Introduction We constructed the NL2Bash corpus with frequently used The dream of using English or any other natural language Bash commands scraped from websites such as question- to program computers has existed for almost as long as answering forums, tutorials, tech blogs, and course materi- the task of programming itself (Sammet, 1966). Although als. We gathered a set of high-quality descriptions of the significantly less precise than a formal language (Dijkstra, commands from Bash programmers. Table 1 shows several 1978), natural language as a programming medium would examples. After careful quality control, we were able to be universally accessible and would support the automation gather over 9,000 English-command pairs, covering over of highly repetitive tasks such as file manipulation, search, 100 unique Bash utilities.