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Applications of Machine Learning to Solve Biological Puzzles
Iowa State University Capstones, Theses and Graduate Theses and Dissertations Dissertations 2019 Applications of machine learning to solve biological puzzles Carla M. Mann Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/etd Part of the Bioinformatics Commons, and the Computer Sciences Commons Recommended Citation Mann, Carla M., "Applications of machine learning to solve biological puzzles" (2019). Graduate Theses and Dissertations. 17508. https://lib.dr.iastate.edu/etd/17508 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Applications of machine learning to solve biological puzzles by Carla M. Mann A dissertation submitted to the graduate faculty in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Major: Bioinformatics and Computational Biology Program of Study Committee: Drena L. Dobbs, Co-major Professor Robert Jernigan, Co-major Professor Carolyn Lawrence-Dill Maura McGrail Kris De Brabanter The student author, whose presentation of the scholarship herein was approved by the program of study committee, is solely responsible for the content of this dissertation. The Graduate College will ensure this dissertation is globally accessible and will not permit alterations after a degree is conferred. Iowa State University Ames, Iowa 2019 Copyright © Carla M. Mann, 2019. All rights reserved. ii DEDICATION There were a number of people who did not participate in the research or writing or lab meetings, but without them this dissertation would not exist and I would be a very different person. -
Results Sporting Weimaraners 5 BB/G1 GCHS CH Simpatico Journey of Thrills
Colorado Springs Kennel Club Sunday, July 4, 2021 Group Results Sporting Weimaraners 5 BB/G1 GCHS CH Simpatico Journey Of Thrills. SS05569301 Vizslas 9 BB/G2 CH Derby's Finishing Touch By Kai JH. SS04465701 Setters (English) 7 BB/G3 GCHS CH Seamrog Spitfire. SR83127601 Brittanys 6 1/W/BB/BW/G4 Trio's Happiest Place On Earth. SS20150901 Hound Petit Basset Griffon Vendeens 6 BB/G1/RBIS GCHB CH Mirepoix's Dubble Bubble RN FDC BCAT CGCA HP55756801 Beagles (13 Inch) 5 BB/G2 GCHB CH Winston-Del Rey's C.C. Rider. HP57090906 Pharaoh Hounds 5 BB/G3 GCHS DC Bazinga Copernicus The Stargazer SC BCAT CGC. HP53625902 Otterhounds 5 BB/G4 GCHB CH Dekenchar's Howlaway's Leader Of The Pack. HP50839404 Working Samoyeds 27 BB/G1 GCHB CH Azteca's John Denver At Summit. WS60872203 Newfoundlands 9 BB/G2 GCHB CH Beecreeks Evenkeel You'Re Gonna Need A Bigger Boat RN CGC Standard Schnauzers 5 BB/G3 GCHS CH Sentry MoonShadow SonDance v Jordan BN RI PT RATN CGCA Great Danes 27 BB/G4 GCHG CH Whispering Pines Mdt King Of The Pride. WS55066301 Terrier Scottish Terriers 10 BB/G1/BIS GCHS CH Mcvan's Stardust. RN33259801 Miniature Bull Terriers 5 BB/G2 GCHG CH Menusha's Pancho Villa. RN29849506 Staffordshire Bull Terriers 15 BB/G3 GCHS CH Juggernaut's Chart A Course Sulu. RN29075103 Border Terriers 11 BB/G4 GCH CH Ranthorn Rarely Still. RN31447901 Toy Pomeranians 27 BB/G1 GCHS CH Tova's Fast And Furious Flash. TS40992701 Manchester Terriers (Toy) 5 BB/G2 GCHS CH Passport Sunkissed It's A Yes From Me Bonchien. -
INTRODUCTION Located on the Western Edge of the Nile Valley
chapter one INTRODUCTION We’re trackers and what we seek are fragments of papyri in ancient Greek. We’ve lled a few crates full already this week. Here are treasures crated, waiting to be shipped from Egypt back to Oxford where we work out each script. First we dig, then we decipher, then we must deduce all the letters that have mouldered into dust. – Beginning of Grenfell’s Monologue, ll. 1–7, Trackers of Oxyrhynchus1 Located on the western edge of the Nile Valley, some 180km south of Cairo on the bank of the Bahr Y¯usuf(Joseph’s Canal),2 lies the modern village ˙ of al-Bahnasa, the ancient site of Oxyrhynchus or city of the Sharp-Nosed Fish.3 Though relatively little is known about this ancient city and its admin- istrative district (nome) prior to the era of direct Roman rule in Egypt in 30bce,4 from this point until the Muslim conquest of Egypt in the seventh century the city is exceptionally well documented. During this period the city became a prosperous centre that came to be regularly described by its 1 Tony Harrison, The Trackers of Oxyrhynchus (Contemporary Classics V) (London: Faber and Faber, 2004), 27–28. 2 As a branch of the Nile Joseph’s Canal runs north and empties into the Fayum oasis and Lake Moeris. 3 The city was named after a species of the mormyrus sh (Elephant-snout sh) that was found in abundance in both the Nile and the Bahr Y¯usufand was subsequently worshipped by the residents of the city. -
Logchips195906.Pdf
THE PERIODICAL L ,/--\ r- r H J p c OF RECENT PUBLICATION ·( _____ )\_) (_ . 1 _) MARITri.m HISTORY ---~ -------. ---- - - ·-- ------·----:------- VOLUHlJl FOUR, NUHB:Bm __SEVEN _____ '?_L_ - --··---- - ----~ - --- - ----ti!JJ;fE 19~5~9 __ SAILIHG BECOlmS TO SAN FRANCISCO than for April. Closely related to the histor,r .of the Projected against this background the early intercoastal trade is the topic of individual record runs to San Franci~co -· ~,iling vessel time between East end \vest teke- on new significance. The :following . j oast s. Traditionally the westbound voy- table gives :first the average time (as · com sge, since it was the greater revenue pro-PUted· a:fter Cutler), then the name 'of-the ·d.ucer and since it involved the beat to ship making the :fastest kn'own arrival for nindward around Cape Horn, has received the month, the year, the number df days in more emphasis, and the time from Boston or the record, and :finally the difference in Hew York to San Francisco was the yard- days between the record: for the month and stick by which American sailing vessel the average: performances wer-e compared. Jan 131 FLY!NG FISH (1853) 92 39 We have shown elsewhere (American Nep- Feb 123 SWORDFISH · (1852) 91 - 32 tune, 1943, p.56) that average times for Mar 122 .WDREW JACKSON(l860) 90 32 this voyage were 136 days in 1880 and 147 Apr 120 FLYING CLOUD (1854) 89 31. in 1900. 1fe showed also (ibid., 1948, n. May 126 SWEEPSTAKES (1856) ' 95 31 151) that both the size and the I!lodel of a June 127 FLYING CLOUD and vessel had a good deal to do with her RED ROVER (1855) 106 21 speed on this voyage, the larger vessels July 127 SEA WITCH (1850) 97 30 having a definite adv~ntage. -
Sphinx Sphinx
SPHINX SPHINX History of a Monument CHRISTIANE ZIVIE-COCHE translated from the French by DAVID LORTON Cornell University Press Ithaca & London Original French edition, Sphinx! Le Pen la Terreur: Histoire d'une Statue, copyright © 1997 by Editions Noesis, Paris. All Rights Reserved. English translation copyright © 2002 by Cornell University All rights reserved. Except for brief quotations in a review, this book, or parts thereof, must not be reproduced in any form without permission in writing from the publisher. For information, address Cornell University Press, Sage House, 512 East State Street, Ithaca, New York 14850. First published 2002 by Cornell University Press Printed in the United States of America Library of Congress Cataloging-in-Publication Data Zivie-Coche, Christiane. Sphinx : history of a moument / Christiane Zivie-Coche ; translated from the French By David Lorton. p. cm. Includes bibliographical references and index. ISBN 0-8014-3962-0 (cloth : alk. paper) 1. Great Sphinx (Egypt)—History. I.Tide. DT62.S7 Z58 2002 932—dc2i 2002005494 Cornell University Press strives to use environmentally responsible suppliers and materials to the fullest extent possible in the publishing of its books. Such materi als include vegetable-based, low-VOC inks and acid-free papers that are recycled, totally chlorine-free, or partly composed of nonwood fibers. For further informa tion, visit our website at www.cornellpress.cornell.edu. Cloth printing 10 987654321 TO YOU PIEDRA en la piedra, el hombre, donde estuvo? —Canto general, Pablo Neruda Contents Acknowledgments ix Translator's Note xi Chronology xiii Introduction I 1. Sphinx—Sphinxes 4 The Hybrid Nature of the Sphinx The Word Sphinx 2. -
Unclaimed Property for County: PITT 7/16/2019
Unclaimed Property for County: PITT 7/16/2019 OWNER NAME ADDRESS CITY ZIP PROP ID ORIGINAL HOLDER ADDRESS CITY ST ZIP JARRELL MARY VON S 2616 BROOKRIDGE CR GREENVILLE 27858 15395542 EDUCATIONAL TESTING SERVICE ROSEDALE ROAD PRINCETON NJ 08541 1526 S CHARLES BLVD LLC 1526 CHARLES BLVD. GREENVILLE 27858 15054283 PITT COUNTY CSC 100 WEST THIRD ST PO BOX 6067 GREENVILLE NC 27835 1628 DIXIE TRAIL LLC 521 COTANCHE ST GREENVILLE 27858 15807614 BRANCH BANKING & TRUST PO BOX 1489 LUMBERTON NC 28359 5TH STREET FOOD COMPANY LLC 123 E 5TH ST GREENVILLE 27858 15807620 BRANCH BANKING & TRUST PO BOX 1489 LUMBERTON NC 28359 623 CTMG CTMG INC. - KRISTINA CREECH 1800 GREENVILLE 27834 16026837 FIRST COVENANT BANK 1731 NORTH ELM STREET COMMERCE GA 30529 NORTH GREENE ST. SUITE B 9TH WARD INVESTMENTS 2910 SATTERFIELD DR GREENVILLE 27834 15192654 DUKE ENERGY CORP 400 S TRYON ST ST04A CHARLOTTE NC 28202 A AND J FRAMING OF NC INC 2313B SADLER DR WINTERVILLE 28590-9868 15137105 BANK OF AMERICA - NORTH CAROLINA PO BOX 17270 DE5-022-03-11 WILMINGTON DE 19885-7270 A B WHITLEY INC P O BOX 2005 GREENVILLE 27834 15374127 CARTERET CRAVEN EMC P O BOX 1490 NEWPORT NC 28570 A WIRELESS 1290 E ARLINGTON BLVD STE 10 GREENVILLE 27858-7854 15973861 WASTE MANAGEMENT HOLDINGS INC 1001 FANNIN, STE 4000 HOUSTON TX 77002 A&B SUPERMARKET 211 S JARVIS ST GREENVILLE 27858-2052 15386284 PAYMENT ALLIANCE INTERNATIONAL INC 25101 HIGH WICKHAM PL, STE 101 LOUISVILLE KY 40245 A&B SUPERMARKET 211 S JARVIS ST GREENVILLE 27858-2052 15386285 PAYMENT ALLIANCE INTERNATIONAL INC 25101 HIGH WICKHAM -
Early Hydraulic Civilization in Egypt Oi.Uchicago.Edu
oi.uchicago.edu Early Hydraulic Civilization in Egypt oi.uchicago.edu PREHISTORIC ARCHEOLOGY AND ECOLOGY A Series Edited by Karl W. Butzer and Leslie G. Freeman oi.uchicago.edu Karl W.Butzer Early Hydraulic Civilization in Egypt A Study in Cultural Ecology Internet publication of this work was made possible with the generous support of Misty and Lewis Gruber The University of Chicago Press Chicago and London oi.uchicago.edu Karl Butzer is professor of anthropology and geography at the University of Chicago. He is a member of Chicago's Committee on African Studies and Committee on Evolutionary Biology. He also is editor of the Prehistoric Archeology and Ecology series and the author of numerous publications, including Environment and Archeology, Quaternary Stratigraphy and Climate in the Near East, Desert and River in Nubia, and Geomorphology from the Earth. The University of Chicago Press, Chicago 60637 The University of Chicago Press, Ltd., London ® 1976 by The University of Chicago All rights reserved. Published 1976 Printed in the United States of America 80 79 78 77 76 987654321 Library of Congress Cataloging in Publication Data Butzer, Karl W. Early hydraulic civilization in Egypt. (Prehistoric archeology and ecology) Bibliography: p. 1. Egypt--Civilization--To 332 B. C. 2. Human ecology--Egypt. 3. Irrigation=-Egypt--History. I. Title. II. Series. DT61.B97 333.9'13'0932 75-36398 ISBN 0-226-08634-8 ISBN 0-226-08635-6 pbk. iv oi.uchicago.edu For INA oi.uchicago.edu oi.uchicago.edu CONTENTS List of Illustrations Viii List of Tables ix Foreword xi Preface xiii 1. -
2008 ARRL November Phone Sweepstakes Results Steve London, N2IC
2008 ARRL November Phone Sweepstakes Results Steve London, N2IC "75th Anniversary Edition Brings Out the Crowds" The 75th anniversary edition of the ARRL Phone Sweepstakes was a record breaker in so many ways – increased activity, numerous records broken in all categories, challenging multipliers, and some of the closest races in recent memory. While the sunspot cycle remained stuck at the bottom, showing few signs of new solar Cycle 24, conditions were indeed improved over the 2007 running. In 2007, many participants bemoaned the long skip conditions on 75 meters, resulting in 0-point contacts with Europeans, while at the same time making contacts within 500 miles was a difficult undertaking. Figure 1-Here is the ebb and flow of Sweepstakes, showing the number of QSOs made on each band during each hour. This year, 75 meters was much better behaved, with nearby contacts being easy to complete, and strong signals from coast-to-coast. Even 15 meters was improved this year, especially if you were fortunate enough to be on the East or West Coasts, Hawaii, or in the Caribbean ARRL sections. 20 meters took the brunt of activity during the daytime hours, resulting, expectedly, in very crowded conditions. Figure 1 shows where the contesters were throughout the contest. To the surprise of many, the 2008 Phone Sweepstakes smashed the old record for the number of entries submitted – 1872 entries. Every year, more and more hams discover how much fun contesting is! This year, there were 38 new Section records, and 13 new Division records as seen in the table. -
Borzoi Club of America 2018 National Specialty
BORZOI CLUB OF AMERICA 2018 NATIONAL SPECIALTY May 22-26, 2018 Richland, Washington JUDGES All Regular & Non-Regular Classes: Ms. Shirley McFadden Sweepstakes: Ms. Tami Marshall Futurity: Ms. Karen Dumke Obedience & Rally: Ms. Mary Jane Shervais Junior Showmanship: Ms. Stacey Davis Dual Champion Stakes Judge: Katie Campbell Generation Class Judge: Katie Campbell Best of Breed / Best Veteran / 1st 7-10 Veteran Bitch GCHS. SYLVAN SILVER SPRINGBOK 4/11/10. Breeders: Christopher and Patti Neale By Ch. Steppelands Final Mikhail of Abidjan – GCh. Sylvan Vitrina Finian’s Rainbow, JC. Owners: Christopher and Patti Neale PAGE 2 - 2018 NATIONAL SPECIALTY CONFORMATION Best of Opposite Sex CH. ELANCE SUMMERLANE TIGERWING 8/2/13. Breeders: Anne Quinn and Cherie Hunchak. By GCh. Elance Black Swan – Ch. Sylvan Pewter Gazelle. Owner: Anne Quinn Best of Winners / Winners Bitch / 1st Open Bitch ELANCE MOONSHIMMER 3/2/16. Breeder: Cherie Hunchak. By GCh. Konza-Plum Creek Bugatti at Elance – FC Wind ’n Satin Dragons Maiden, SC. Owner: Cherie Hunchak CONFORMATION 2018 NATIONAL SPECIALTY - PAGE 3 Select Dog GCH. JUSTART’S RIOT ACT 1/24/15. Breeders: S. McGraw, J. Spiers and K. Staudt-Cartabona. By Ch. Taugo’s Ulric – Ch. Majenkir Hunter’s Dawn. Owner: Ken Cook Select Bitch GCH. ZOOROPA ADRIENNE SHE MOVES EYES FOLLOW 6/27/14. Breeders: Patty Anderson and Jan Leikam. By GCh. Aashtoria Wildhunt Hidden Agenda, CGC – GCh. Zooropa Laureate Adrienne Picture This. Owners: Patty Anderson and Monica Barry PAGE 4 - 2018 NATIONAL SPECIALTY CONFORMATION Award of Merit GCHB. DC GLADKII VETER RAVENS WOOD, SC 5/31/13. Breeders: Roy Silguero and Curtis Judd. -
An Anthology of Maritime Reading Experiences
An Anthology of Maritime Reading Experiences A book that has been read at sea has a near claim on our friendship, and is a thing one is loath to part with, or change, even for a better book. But the well-tried friend of many voyages is, oh, so hard to part with at sea. A resting-place in the solemn sea of sameness—in the trackless ocean, marked only by imaginary lines and circles—is a cheerless spot to look to; yet, how many have treasures there! (Voyage of the Liberdade, by Joshua Slocum. Boston, Robinson & Stephenson, 1890. p. 30) Allen, Everett S. Children of the Light: The Rise and Fall of New Bedford Whaling and the Death of the Arctic Fleet. Boston: Little, Brown, 1973. A somewhat elegiac tale of the decline of whaling and New Bedford, contrasted with descriptions of the life of the Inuit, before and after the coming of the whalers to the Beaufort Sea area. Main focus at end is on the disastrous season at Pt. Barrow of the whaling fleet which abandoned over 25 ships, but managed to rescue over 1200 whalemen. p. 89: When a library was donated to New Bedford by the Friends Society in 1813, a committee of members went over the list of books and discarded many, such as several foremost English poets and Shakespeare's works, as unfit for young people to read. This opposition to certain aspects of culture and the arts, implemented by the influential Quaker leadership, was dominant in the New Bedford area for many years. -
Early Sailing
Shattemuc Yacht Club History Early Sailing at Ossining 1 was a master builder, constructing and The boats were all sailed by their sailing many vessels, commanding respective owners, and the prizes were Published Articles several at different times. Capt. Henry awarded by Henry L Butler and John Harris was also a prominent merchant Haff, the appointed judges, as follows: of and sloop captain as well, and for nearly Early Sailing fifty years lived in Sing Sing, Latterly a Hester Ann, first prize …………..$22.50 popular Justice of the Peace. The sloops Nameless, second prize……….. …16.00 at Bolivar, Favorite, Paris, Providence, Eliza, third prize………………….. .9.00 Return, and others, would each have Swallow, fourth prize…………….. .8.50 Quaker, fifth prize …………………8.00 Ossining, NY. their place at the dock, and on Tuesdays Imp, sixth prize……………….……7.50 and Saturdays, the scene was a busy ~ ----------o---------- one. Throngs of farmers with their teams would crowd all about, and the 09.16.1858 1836 funny old lumbering market wagons, Postponement. The Regatta of the Sing with their long white canvas tops Sing Yacht Club, which was to have The Republican puckered round over the front, would taken place today, has been postponed 08.10.1886 rattle through Main street down the until Saturday next, in consequence of by Roscoe Edgett steep hill to the wharf to deposit their the severe storm. The names of the Sing Sing Fifty Years Ago. Means of load of butter, cheese and the like. One boats to be entered for the race are the transportation were simple, few and of these marketmen, Mr. -
The Courier-Gazette Thursday
Issued Thursday Tuesday Thursday Issue Saturday The Courier-gazette By The Ceurier-Guette., 465 Main St. THREE CENTS A COPY Established January, 1846. Entered aa Second Glut Mail Matter. Rockland, Maine, Saturday, February 28, 1925. Volume 80............... Number 26. largest of American sailing ships. TO BOOST MAINE The Courier-Gazette the next justice MEMORIES OF AN ACTIVE LIFE He kept the tug alongside so that, “NEXT THING TO A GOOD DOCTOR” I could see the mates choose sailors _ , , , . A 1 J T C An Old Family That's What They Say About THREE-TIMES-A-WEEK Will It Be Farrington, Emery ’ for their watches, which they did al- Kockland Is Asked I O CO- Doctor's Favorite ternately one by one. On the deck Qperate Jn ALL THE HOME NEWS Or Pattangall?-Another Men and Shl«* and Seal,n8 Wax “Story of k Publicity Cam- Prescription. Ballard’s Golden 03 immediately in front of the cabin, Thomaston Boy Who Made Good. A time-tried Family Emerg Subscription $3.00 per year payable In ad- Vacancy Soon. j the top of which served as a bridge, paign. ency Remedy, best for Coughs, i vanee; single copies three cents. , the first mate's watch lined up on Advertising rates based upon circulation the starboard, and the second Colds, Colic, Cramps, Croup and and very reasonable. Who is to be the next judge of the ■ Mayor Snow has received (he fol all sudden attacks. A Foe to NEWSPAPER FIISTORY (By Charles R. Flint) i mate’s watch on the port side. As Supreme Court of Maine to fill the ' lowing communication from Gov.