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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
Bioluminescence of the Poecilostomatoid Copepod Oncaea Conifera
l MARINE ECOLOGY PROGRESS SERIES Published April 22 Mar. Ecol. Prog. Ser. Bioluminescence of the poecilostomatoid copepod Oncaea conifera Peter J. Herring1, M. I. ~atz~,N. J. ~annister~,E. A. widder4 ' Institute of Oceanographic Sciences, Deacon Laboratory, Brook Road Wormley, Surrey GU8 5UB, United Kingdom 'Marine Biology Research Division 0202, Scripps Institution of Oceanography, La Jolla, California 92093, USA School of Biological Sciences, University of Birmingham, Edgbaston. Birmingham B15 2TT, United Kingdom Harbor Branch Oceanographic Institution, 5600 Old Dixie Highway, Fort Pierce, Florida 34946, USA ABSTRACT: The small poecilostomatoid copepod Oncaea conifera Giesbrecht bears a large number of epidermal luminous glands, distributed primarily over the dorsal cephalosome and urosome. Bio- luminescence is produced in the form of short (80 to 200 ms duration) flashes from withrn each gland and there IS no visible secretory component. Nevertheless each gland opens to the exterior by a simple valved pore. Intact copepods can produce several hundred flashes before the luminescent system is exhausted. Individual flashes had a maximum measured flux of 7.5 X 10" quanta s ', and the flash rate follows the stimulus frequency up to 30 S" Video observations show that ind~vidualglands flash repeatedly and the flash propagates along their length. The gland gross morphology is highly variable although each gland appears to be unicellular. The cytoplasm contains an extensive endoplasmic reticulum. 0. conifera swims at Reynolds numbers of 10 to 50, and is normally associated with surfaces (e.g. marine snow). We suggest that the unique anatomical and physiological characteristics of the luminescent system arc related to the specialised ecological niche occupied by this species. -
Title CYCLOPOID COPEPODS of the FAMILY
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Kyoto University Research Information Repository CYCLOPOID COPEPODS OF THE FAMILY Title CHONDRACANTHIDAE PARASITIC ON NEW ZEALAND MARINE FISHES Author(s) Ho, Ju-Shey PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1975), 22(5): 303-319 Issue Date 1975-11-29 URL http://hdl.handle.net/2433/175898 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University CYCLOPOID COPEPODS OF THE FAMILY CHONDRACANTHIDAE PARASITIC ON NEW ZEALAND MARINE FISHES Ju-SHEY HO Department of Biology, California State University, Long Beach, California 90840 U.S.A. With Text-figures 1-10 Chondracanthidae is a family of highly transformed cyclopoid copepods that are found exclusively on marine demersal fish. Although a complete life history of this family of copepods is still unknown, it seems, judging from the available infor mation of their larval development, that the parasites do not require an intermediate host. Both adult and larva are found in the oral-branchial cavity of the fish, attaching to the host tissue by their powerful, hook-like second antenna. Although a few species are known to live in the nasal cavity, they have not been found on the body surface or fins of the fish. The male is characteristically dwarf and attaches to the genital area of the female throughout its life. In many species, the transformed female has a pair of small processes on the posteroventral surface of the trunk just in front of the genital segment. The pigmy male holds on to one of these two processes by its transformed hook-like second antennae. -
Data-Driven Identification of Potential Zika Virus Vectors Michelle V Evans1,2*, Tad a Dallas1,3, Barbara a Han4, Courtney C Murdock1,2,5,6,7,8, John M Drake1,2,8
RESEARCH ARTICLE Data-driven identification of potential Zika virus vectors Michelle V Evans1,2*, Tad A Dallas1,3, Barbara A Han4, Courtney C Murdock1,2,5,6,7,8, John M Drake1,2,8 1Odum School of Ecology, University of Georgia, Athens, United States; 2Center for the Ecology of Infectious Diseases, University of Georgia, Athens, United States; 3Department of Environmental Science and Policy, University of California-Davis, Davis, United States; 4Cary Institute of Ecosystem Studies, Millbrook, United States; 5Department of Infectious Disease, University of Georgia, Athens, United States; 6Center for Tropical Emerging Global Diseases, University of Georgia, Athens, United States; 7Center for Vaccines and Immunology, University of Georgia, Athens, United States; 8River Basin Center, University of Georgia, Athens, United States Abstract Zika is an emerging virus whose rapid spread is of great public health concern. Knowledge about transmission remains incomplete, especially concerning potential transmission in geographic areas in which it has not yet been introduced. To identify unknown vectors of Zika, we developed a data-driven model linking vector species and the Zika virus via vector-virus trait combinations that confer a propensity toward associations in an ecological network connecting flaviviruses and their mosquito vectors. Our model predicts that thirty-five species may be able to transmit the virus, seven of which are found in the continental United States, including Culex quinquefasciatus and Cx. pipiens. We suggest that empirical studies prioritize these species to confirm predictions of vector competence, enabling the correct identification of populations at risk for transmission within the United States. *For correspondence: mvevans@ DOI: 10.7554/eLife.22053.001 uga.edu Competing interests: The authors declare that no competing interests exist. -
First Molecular Data and Morphological Re-Description of Two
Journal of King Saud University – Science 33 (2021) 101290 Contents lists available at ScienceDirect Journal of King Saud University – Science journal homepage: www.sciencedirect.com Original article First molecular data and morphological re-description of two copepod species, Hatschekia sargi and Hatschekia leptoscari, as parasites on Parupeneus rubescens in the Arabian Gulf ⇑ Saleh Al-Quraishy a, , Mohamed A. Dkhil a,b, Nawal Al-Hoshani a, Wejdan Alhafidh a, Rewaida Abdel-Gaber a,c a Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia b Department of Zoology and Entomology, Faculty of Science, Helwan University, Cairo, Egypt c Zoology Department, Faculty of Science, Cairo University, Cairo, Egypt article info abstract Article history: Little information is available about the biodiversity of parasitic copepods in the Arabian Gulf. The pre- Received 6 September 2020 sent study aimed to provide new information about different parasitic copepods gathered from Revised 30 November 2020 Parupeneus rubescens caught in the Arabian Gulf (Saudi Arabia). Copepods collected from the infected fish Accepted 9 December 2020 were studied using light microscopy and scanning electron microscopy and then examined using stan- dard staining and measuring techniques. Phylogenetic analyses were conducted based on the partial 28S rRNA gene sequences from other copepod species retrieved from GenBank. Two copepod species, Keywords: Hatschekia sargi Brian, 1902 and Hatschekia leptoscari Yamaguti, 1939, were identified as naturally 28S rRNA gene infected the gills of fish. Here we present a phylogenetic analysis of the recovered copepod species to con- Arabian Gulf Hatschekiidae firm their taxonomic position in the Hatschekiidae family within Siphonostomatoida and suggest the Marine fish monophyletic origin this family. -
Copepod Distribution and Production in a Mid-Atlantic Ridge Archipelago
Anais da Academia Brasileira de Ciências (2014) 86(4): 1719-1733 (Annals of the Brazilian Academy of Sciences) Printed version ISSN 0001-3765 / Online version ISSN 1678-2690 http://dx.doi.org/10.1590/0001-3765201420130395 www.scielo.br/aabc Copepod distribution and production in a Mid-Atlantic Ridge archipelago PEDRO A.M.C. MELO1, MAURO DE MELO JÚNIOR2, SILVIO J. DE MACÊDO1, MOACYR ARAUJO1 and SIGRID NEUMANN-LEITÃO1 1Universidade Federal de Pernambuco, Departamento de Oceanografia, Av. Arquitetura, s/n, Cidade Universitária, 50670-901 Recife, PE, Brasil 2Universidade Federal Rural de Pernambuco, Unidade Acadêmica de Serra Talhada, Fazenda Saco, s/n, Zona Rural, 56903-970 Serra Talhada, PE, Brasil Manuscript received on October 3, 2013; accepted for publication on March 11, 2014 ABSTRACT The Saint Peter and Saint Paul Archipelago (SPSPA) are located close to the Equator in the Atlantic Ocean. The aim of this study was to assess the spatial variations in the copepod community abundance, and the biomass and production patterns of the three most abundant calanoid species in the SPSPA. Plankton samples were collected with a 300 µm mesh size net along four transects (north, east, south and west of the SPSPA), with four stations plotted in each transect. All transects exhibited a tendency toward a decrease in copepod density with increasing distance from the SPSPA, statistically proved in the North. Density varied from 3.33 to 182.18 ind.m-3, and differences were also found between the first perimeter (first circular distance band) and the others. The total biomass varied from 15.25 to 524.50 10-3 mg C m-3 and production from 1.19 to 22.04 10-3 mg C m-3d-1. -
DOUBLE VISION by Peter Campus (1971, 18 Min., B/W, Sound) by John Minkowsky
DOUBLE VISION by Peter Campus (1971, 18 min., b/w, sound) By John Minkowsky The following was originally issued as a Program Note to accompany the touring showcase, “The Moving Image State-wide: 13 Tapes by 8 Videomakers,” sponsored by the University-wide Committee on the Arts of the State University of New York system in September 1978, and curated by John Minkowsky, Video/Electronic Arts Programmer at Media Study/Buffalo. To human beings, the most familiar two-eyed or binocular visual system is that of human eyesight. As we observe a scene – a set of entities arranged in space – each eye acts like a camera, focusing a two-dimensional image on its retina or innermost surface. The difference in location of the eyes results in each retina perceiving a slightly different aspect of the same scene. In the processing of both retinal images at higher levels of the visual system – ultimately, the visual cortex of the brain – there emerges a single view of the scene, including the perception of depth or distance relationships. Tri-dimensional or stereoscopic vision is a distinctive characteristic of human binocularity. To refer to the human visual system as the most “familiar” binocular model, as I have done, is an understatement, for it is the system through which we directly experience the world and to which all our considerations of binocular vision must refer. It is also an overstatement because very few are aware of its workings. There are other two-eyed systems that exist in nature or can be imagined as conceptual constructs that do not necessarily result in the stereoscopic perception of depth. -
ACTA ICHTHYOLOGICA ET PISCATORIA Jadwiga GRABDA
ACTA ICHTHYOLOGICA ET PISCATORIA Vol. V, Faac. 1 Szczecin, 197 5 Jadwiga GRABDA,lhrahimAbdel Fattah Mahmoud SOLIMAN Parultolcgy COPEPODS - PARASITES OF THE GENUS MERLUCCIUS FROM THE ATLANTIC OCEAN AND MEDITERRANEAN SEA PASOZYTNICZE WIDl:.ONOGI RYB RODZAJU MERLUCCIUS Z OCEANU ATLANTYCKIEGO I MORZA SRODZIEMNEGO Institute of Ichthyology 3 species of parasitic copepods were found on Atlantic hakes caught off the western coasts of Europe, Africa, the Medi terranean Sea (off Alexandria), and North America. The species are: Chondracanthus fnerluccii, Brachiel/a merluccii and Parabrachiella australis. The parasites importance as indicators of the affinities between hakes is discussed. Various hypotheses concerning the origin of the genus Merluccius are presented. INTRODUCTION Studies on parasites as biological indicators of their host's population status, affinities, migrations, origin and zoogeographic distribution are a valuable method to explain many problems of biology of fish. The parasitic species of a narrow specificity are particularly interesting as indicators. The parasitic copepods of the genera Chondracanthus, Brachiella and Parabrachiellaappear to play such a role in hake. During the investigations on species variability within the genus Merluccius from the Atlantic and Mediterranean Sea (Soliman, 1973), the parasitic copepods were collected in order to utilize them as possible indicators of specific affiliations and affinities between the hakes investigated. MATERIALS AND METHOD The parasites were collected in 1971 � 1973 from mouth and gill cavities of the fishes exami1ied. 32 Jadwiga Grabda, Ibrahim Abdel Fattah Mahmoud Soliman Table 1 and the chart enclosed (Fig. 1) summarize number of fishesexamined, fishing grounds and catching time of particular hake stocks. 45' "1' tJt�H m-����;-��������-f-������������-"<t--==,__���11,' o' ,s· 45' Fig. -
Have Chondracanthid Copepods Co-Speciated with Their Teleost Hosts?
Systematic Parasitology 44: 79–85, 1999. 79 © 1999 Kluwer Academic Publishers. Printed in the Netherlands. Have chondracanthid copepods co-speciated with their teleost hosts? Adrian M. Paterson1 & Robert Poulin2 1Ecology and Entomology Group, Lincoln University, PO Box 84, Lincoln, New Zealand 2Department of Zoology, University of Otago, PO Box 56, Dunedin, New Zealand Accepted for publication 26th October, 1998 Abstract Chondracanthid copepods parasitise many teleost species and have a mobile larval stage. It has been suggested that copepod parasites, with free-living infective stages that infect hosts by attaching to their external surfaces, will have co-evolved with their hosts. We examined copepods from the genus Chondracanthus and their teleost hosts for evidence of a close co-evolutionary association by comparing host and parasite phylogenies using TreeMap analysis. In general, significant co-speciation was observed and instances of host switching were rare. The preva- lence of intra-host speciation events was high relative to other such studies and may relate to the large geographical distances over which hosts are spread. Introduction known from the Pacific, and 17 species from the Atlantic (2 species occur in both oceans; none are About one-third of known copepod species are par- reported from the Indian Ocean). asitic on invertebrates or fish (Humes, 1994). The Parasites with direct life-cycles, as well as para- general biology of copepods parasitic on fish is much sites with free-living infective stages that infect hosts better known than that of copepods parasitic on in- by attaching to their external surfaces, are often said to vertebrates (Kabata, 1981). -
Taxonomy, Biology and Phylogeny of Miraciidae (Copepoda: Harpacticoida)
TAXONOMY, BIOLOGY AND PHYLOGENY OF MIRACIIDAE (COPEPODA: HARPACTICOIDA) Rony Huys & Ruth Böttger-Schnack SARSIA Huys, Rony & Ruth Böttger-Schnack 1994 12 30. Taxonomy, biology and phytogeny of Miraciidae (Copepoda: Harpacticoida). - Sarsia 79:207-283. Bergen. ISSN 0036-4827. The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, verti cal and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria {Trichodesmium). Rony Huys, Department of Zoology, The Natural History Museum, Cromwell Road, Lon don SW7 5BD, England. - Ruth Böttger-Schnack, Institut für Meereskunde, Düsternbroo- ker Weg 20, D-24105 Kiel, Germany. CONTENTS Introduction.............. .. 207 Genus Distioculus pacticoids can be carried into the open ocean by Material and methods ... .. 208 gen. nov.................. 243 algal rafting. Truly planktonic species which perma Systematics and Distioculus minor nently reside in the water column, however, form morphology .......... -
Taxonomic Resolutions Based on 18S Rrna Genes: a Case Study of Subclass Copepoda
RESEARCH ARTICLE Taxonomic Resolutions Based on 18S rRNA Genes: A Case Study of Subclass Copepoda Shu Wu1,2, Jie Xiong1, Yuhe Yu1* 1 Key Laboratory of Aquatic Biodiversity and Conservation of Chinese Academy of Sciences, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China, 2 University of Chinese Academy of Sciences, Beijing, China * [email protected] Abstract Biodiversity studies are commonly conducted using 18S rRNA genes. In this study, we com- pared the inter-species divergence of variable regions (V1–9) within the copepod 18S rRNA gene, and tested their taxonomic resolutions at different taxonomic levels. Our results indi- cate that the 18S rRNA gene is a good molecular marker for the study of copepod biodiver- sity, and our conclusions are as follows: 1) 18S rRNA genes are highly conserved intra- species (intra-species similarities are close to 100%); and could aid in species-level analy- ses, but with some limitations; 2) nearly-whole-length sequences and some partial regions OPEN ACCESS (around V2, V4, and V9) of the 18S rRNA gene can be used to discriminate between sam- Citation: Wu S, Xiong J, Yu Y (2015) Taxonomic ples at both the family and order levels (with a success rate of about 80%); 3) compared Resolutions Based on 18S rRNA Genes: A Case with other regions, V9 has a higher resolution at the genus level (with an identification suc- Study of Subclass Copepoda. PLoS ONE 10(6): e0131498. doi:10.1371/journal.pone.0131498 cess rate of about 80%); and 4) V7 is most divergent in length, and would be a good candi- date marker for the phylogenetic study of Acartia species. -
Subclase Copepoda (Crustacea: Maxillopoda)
Rev. Biol. Trop. 49. Supl. 2: 115-133, 2001 www.rtb.ac.cr, www.ucr.ac.cr Biodiversidad marina de Costa Rica, los microcrustáceos: Subclase Copepoda (Crustacea: Maxillopoda) 1-2-3 Alvaro Morales-Ramírez 1Centro de Investigación en Ciencias del May y Limnología (CIMAR), Universidad de Costa Rica, 2060 San José, Costa Rica. Fax (506) 207 3280. 2Escuela de Biología. Universidad de Costa Rica, 2060 San José, Costa Rica. 3Sede del Pacífico, Universidad de Costa Rica, Costa Rica. Correo electrónico: [email protected] (Recibido 01-II-2000. Corregido 31-VIII-2000. Aceptado 07-II-2001) Abstract : This report is part of a series that summarizes the species and localities of Costa Rican marine taxa. A review of the literature on copepods, both pelagic and benthic for the Pacific and Caribbean coast of Costa Rica, includes eigthy species. Sixty seven pelagic species have been found, distributed between sixteen calanoid, one cyclopoid, three harparticoid and four poecilostomatoid families. Moreover, thirteen benthonic species distributed into six families, all harparticoids, are reported. Among the pelagic families, Pontellidae has six species, while Paracalanidae and Eucalanidae had five each. Other families, like Calanidae, Pseudodiaptomidae and Acartiidae had four species and most families only one. Forty five species are reported only for the Pacific coast, thirteen for the Caribbean coast, only nine species occurred in both coasts; being a direct consequence of the more intensive research effort in the Pacific. Pelagic copepod biodiversity reflects different oceanographic conditions in both coasts.Typical estuarine species were found in the lower region of the Gulf of Nicoya, while a mixture of estuarine and oceanic species were found in Golfo Dulce.