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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
"Lophophorates" Brachiopoda Echinodermata Asterozoa
Deuterostomes Bryozoa Phoronida "lophophorates" Brachiopoda Echinodermata Asterozoa Stelleroidea Asteroidea Ophiuroidea Echinozoa Holothuroidea Echinoidea Crinozoa Crinoidea Chaetognatha (arrow worms) Hemichordata (acorn worms) Chordata Urochordata (sea squirt) Cephalochordata (amphioxoius) Vertebrata PHYLUM CHAETOGNATHA (70 spp) Arrow worms Fossils from the Cambrium Carnivorous - link between small phytoplankton and larger zooplankton (1-15 cm long) Pharyngeal gill pores No notochord Peculiar origin for mesoderm (not strictly enterocoelous) Uncertain relationship with echinoderms PHYLUM HEMICHORDATA (120 spp) Acorn worms Pharyngeal gill pores No notochord (Stomochord cartilaginous and once thought homologous w/notochord) Tornaria larvae very similar to asteroidea Bipinnaria larvae CLASS ENTEROPNEUSTA (acorn worms) Marine, bottom dwellers CLASS PTEROBRANCHIA Colonial, sessile, filter feeding, tube dwellers Small (1-2 mm), "U" shaped gut, no gill slits PHYLUM CHORDATA Body segmented Axial notochord Dorsal hollow nerve chord Paired gill slits Post anal tail SUBPHYLUM UROCHORDATA Marine, sessile Body covered in a cellulose tunic ("Tunicates") Filter feeder (» 200 L/day) - perforated pharnx adapted for filtering & repiration Pharyngeal basket contractable - squirts water when exposed at low tide Hermaphrodites Tadpole larvae w/chordate characteristics (neoteny) CLASS ASCIDIACEA (sea squirt/tunicate - sessile) No excretory system Open circulatory system (can reverse blood flow) Endostyle - (homologous to thyroid of vertebrates) ciliated groove -
(12) United States Patent (10) Patent No.: US 6,395,889 B1 Robison (45) Date of Patent: May 28, 2002
USOO6395889B1 (12) United States Patent (10) Patent No.: US 6,395,889 B1 Robison (45) Date of Patent: May 28, 2002 (54) NUCLEIC ACID MOLECULES ENCODING WO WO-98/56804 A1 * 12/1998 ........... CO7H/21/02 HUMAN PROTEASE HOMOLOGS WO WO-99/0785.0 A1 * 2/1999 ... C12N/15/12 WO WO-99/37660 A1 * 7/1999 ........... CO7H/21/04 (75) Inventor: fish E. Robison, Wilmington, MA OTHER PUBLICATIONS Vazquez, F., et al., 1999, “METH-1, a human ortholog of (73) Assignee: Millennium Pharmaceuticals, Inc., ADAMTS-1, and METH-2 are members of a new family of Cambridge, MA (US) proteins with angio-inhibitory activity', The Journal of c: - 0 Biological Chemistry, vol. 274, No. 33, pp. 23349–23357.* (*) Notice: Subject to any disclaimer, the term of this Descriptors of Protease Classes in Prosite and Pfam Data patent is extended or adjusted under 35 bases. U.S.C. 154(b) by 0 days. * cited by examiner (21) Appl. No.: 09/392, 184 Primary Examiner Ponnathapu Achutamurthy (22) Filed: Sep. 9, 1999 ASSistant Examiner William W. Moore (51) Int. Cl." C12N 15/57; C12N 15/12; (74) Attorney, Agent, or Firm-Alston & Bird LLP C12N 9/64; C12N 15/79 (57) ABSTRACT (52) U.S. Cl. .................... 536/23.2; 536/23.5; 435/69.1; 435/252.3; 435/320.1 The invention relates to polynucleotides encoding newly (58) Field of Search ............................... 536,232,235. identified protease homologs. The invention also relates to 435/6, 226, 69.1, 252.3 the proteases. The invention further relates to methods using s s s/ - - -us the protease polypeptides and polynucleotides as a target for (56) References Cited diagnosis and treatment in protease-mediated disorders. -
Echinoidea: Clypeasteroida)
Zootaxa 3857 (4): 501–526 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3857.4.3 http://zoobank.org/urn:lsid:zoobank.org:pub:76021E0C-7542-455B-82F4-C670A3DC8806 Phylogenetic re-evaluation of fossil and extant micro-echinoids with revision of Tridium, Cyamidia, and Lenicyamidia (Echinoidea: Clypeasteroida) RICH MOOI1, ANDREAS KROH2,4 & DINESH K. SRIVASTAVA3 1Department of Invertebrate Zoology and Geology, California Academy of Sciences, 55 Music Concourse Drive, San Francisco, California 94118, USA. E-mail: [email protected] 2Naturhistorisches Museum Wien, Burgring 7, 1010 Vienna, Austria. E-mail: [email protected] 3Centre of Advanced Study in Geology, University of Lucknow, Lucknow 226 007, India. E-mail: [email protected] 4Corresponding author Abstract Tridium kieri Tandon & Srivastava, 1980, a clypeasteroid micro-echinoid from the Middle Eocene of Kachchh, India, has an apical system with just 3 gonopores. This condition is otherwise almost unknown among clypeasteroids, yet the mor- phology of Tridium is very similar to that of extant Fibularia, including members of another relatively poorly known ge- nus from the Indian subcontinent and Western Australia, Cyamidia Lambert & Thiéry, 1914. Re-examination of the type and additional material of T. kieri and Cyamidia paucipora Brunnschweiler, 1962, along with specimens identified as C. nummulitica nummulitica (Duncan & Sladen, 1884), allows for redescription of these forms. For the first time, maps of coronal plate architecture of Tridium and Cyamidia are developed, and SEM images of test surface details of the former are provided. -
First Record of the Irregular Sea Urchin Lovenia Cordiformis (Echinodermata: Spatangoida: Loveniidae) in Colombia C
Muñoz and Londoño-Cruz Marine Biodiversity Records (2016) 9:67 DOI 10.1186/s41200-016-0022-9 RECORD Open Access First record of the irregular sea urchin Lovenia cordiformis (Echinodermata: Spatangoida: Loveniidae) in Colombia C. G. Muñoz1* and E. Londoño-Cruz1,2 Abstract Background: A first record of occurrence of the irregular sea urchin Lovenia cordiformis in the Colombian Pacific is herein reported. Results: We collected one specimen of Lovenia cordiformis at Gorgona Island (Colombia) in a shallow sandy bottom next to a coral reef. Basic morphological data and images of the collected specimen are presented. The specimen now lies at the Echinoderm Collection of the Marine Biology Section at Universidad del Valle (Cali, Colombia; Tag Code UNIVALLE: CRBMeq-UV: 2014–001). Conclusions: This report fills a gap in and completes the distribution of the species along the entire coast of the Panamic Province in the Tropical Eastern Pacific, updating the echinoderm richness for Colombia to 384 species. Keywords: Lovenia cordiformis, Loveniidae, Sea porcupine, Heart urchin, Gorgona Island Background continental shelf of the Pacific coast of Colombia, filling Heart shape-bodied sea urchins also known as sea por- in a gap of its coastal distribution in the Tropical Eastern cupines (family Loveniidae), are irregular echinoids char- Pacific (TEP). acterized by its secondary bilateral symmetry. Unlike most sea urchins, features of the Loveniidae provide dif- Materials and methods ferent anterior-posterior ends, with mouth and anus lo- One Lovenia cordiformis specimen was collected on cated ventrally and distally on an oval-shaped horizontal October 19, 2012 by snorkeling during low tide at ap- plane. -
Cei'itre for Newfoundi.Ano Studies
CEI'ITRE FOR NEWFOUNDI.ANO STUDIES TOTAL OF 10 PACES ONLY MAY BE XEROXED (W1thout Author·• Pt-rminton) PURIFICATION AND CHARACTERIZATION OF MAJOR GELATIN CLEAVAGE ACTIVITIES IN THE APICALLY LOCATED EXTRACELLULAR MATRIX OF THE SEA URCHIN EMBRYO by Lavanya Ranganathan A Thesis Submitted to the School of Graduate Studies in Partial Fulfillment of the Requirements for the Degree of Master of Science Department of Biochemistry Memorial University of Newfoundland and Labrador May, 2004 St.John's Newfoundland and Labrador Canada Library and Bibliotheque et 1+1 Archives Canada Archives Canada Published Heritage Direction du Branch Patrimoine de !'edition 395 Wellington Street 395, rue Wellington Ottawa ON K1A ON4 Ottawa ON K1A ON4 Canada Canada Your file Votre reference ISBN: 0-612-99107-5 Our file Notre reference ISBN: 0-612-99107-5 NOTICE: AVIS: The author has granted a non L'auteur a accorde une licence non exclusive exclusive license allowing Library permettant a Ia Bibliotheque et Archives and Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par telecommunication ou par I' Internet, preter, telecommunication or on the Internet, distribuer et vendre des theses partout dans loan, distribute and sell theses le monde, a des fins commerciales ou autres, worldwide, for commercial or non sur support microforme, papier, electronique commercial purposes, in microform, et/ou autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve Ia propriete du droit d'auteur ownership and moral rights in et des droits moraux qui protege cette these. -
PUBLICATIONS by JAMES SPRINKLE 1965 -- Sprinkle, James
PUBLICATIONS BY JAMES SPRINKLE 1965 -- Sprinkle, James. 1965. Stratigraphy and sedimentary petrology of the lower Lodgepole Formation of southwestern Montana. M.I.T. Department of Geology and Geophysics, unpublished Senior Thesis, 29 p. (see #56 and 66 below) 1966 1. Sprinkle, James and Gutschick, R. C. 1966. Blastoids from the Sappington Formation of southwest Montana (Abst.). Geological Society of America Special Paper 87:163-164. 1967 2. Sprinkle, James and Gutschick, R. C. 1967. Costatoblastus, a channel fill blastoid from the Sappington Formation of Montana. Journal of Paleon- tology, 41(2):385-402. 1968 3. Sprinkle, James. 1968. The "arms" of Caryocrinites, a Silurian rhombiferan cystoid (Abst.). Geological Society of America Special Paper 115:210. 1969 4. Sprinkle, James. 1969. The early evolution of crinozoan and blastozoan echinoderms (Abst.). Geological Society of America Special Paper 121:287-288. 5. Robison, R. A. and Sprinkle, James. 1969. A new echinoderm from the Middle Cambrian of Utah (Abst.). Geological Society of America Abstracts with Programs, 1(5):69. 6. Robison, R. A. and Sprinkle, James. 1969. Ctenocystoidea: new class of primitive echinoderms. Science, 166(3912):1512-1514. 1970 -- Sprinkle, James. 1970. Morphology and Evolution of Blastozoan Echino- derms. Harvard University Department of Geological Sciences, unpublished Ph.D. Thesis, 433 p. (see #8 below) 1971 7. Sprinkle, James. 1971. Stratigraphic distribution of echinoderm plates in the Antelope Valley Limestone of Nevada and California. U.S. Geological Survey Professional Paper 750-D (Geological Survey Research 1971):D89-D98. 1973 8. Sprinkle, James. 1973. Morphology and Evolution of Blastozoan Echino- derms. Harvard University, Museum of Comparative Zoology Special Publication, 283 p. -
The Panamic Biota: Some Observations Prior to a Sea-Level Canal
Bulletin of the Biological Society of Washington No. 2 THE PANAMIC BIOTA: SOME OBSERVATIONS PRIOR TO A SEA-LEVEL CANAL A Symposium Sponsored by The Biological Society of Washington The Conservation Foundation The National Museum of Natural History The Smithsonian Institution MEREDITH L. JONES, Editor September 28, 1972 CONTENTS Foreword The Editor - - - - - - - - - - Introduction Meredith L. Jones ____________ vi A Tribute to Waldo Lasalle Schmitt George A. Llano 1 Background for a New, Sea-Level, Panama Canal David Challinor - - - - - - - - - - - Observations on the Ecology of the Caribbean and Pacific Coasts of Panama - - - - Peter W. Glynn _ 13 Physical Characteristics of the Proposed Sea-Level Isthmian Canal John P. Sheffey - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 31 Exchange of Water through the Proposed Sea-Level Canal at Panama Donald R. F. Harleman - - - - - - - - - - - - - - - - - - - - - - - - - - - 41 Biological Results of the University of Miami Deep-Sea Expeditions. 93. Comments Concerning the University of Miami's Marine Biological Survey Related to the Panamanian Sea-Level Canal Gilbert L. Voss - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 49 Museums as Environmental Data Banks: Curatorial Problems Posed by an Extensive Biological Survey Richard S. Cowan - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 59 A Review of the Marine Plants of Panama Sylvia A. Earle - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 69 Ecology and Species Diversity of -
Reinterpretation of the Enigmatic Ordovician Genus Bolboporites (Echinodermata)
Reinterpretation of the enigmatic Ordovician genus Bolboporites (Echinodermata). Emeric Gillet, Bertrand Lefebvre, Véronique Gardien, Emilie Steimetz, Christophe Durlet, Frédéric Marin To cite this version: Emeric Gillet, Bertrand Lefebvre, Véronique Gardien, Emilie Steimetz, Christophe Durlet, et al.. Reinterpretation of the enigmatic Ordovician genus Bolboporites (Echinodermata).. Zoosymposia, Magnolia Press, 2019, 15 (1), pp.44-70. 10.11646/zoosymposia.15.1.7. hal-02333918 HAL Id: hal-02333918 https://hal.archives-ouvertes.fr/hal-02333918 Submitted on 13 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Reinterpretation of the Enigmatic Ordovician Genus Bolboporites 2 (Echinodermata) 3 4 EMERIC GILLET1, BERTRAND LEFEBVRE1,3, VERONIQUE GARDIEN1, EMILIE 5 STEIMETZ2, CHRISTOPHE DURLET2 & FREDERIC MARIN2 6 7 1 Université de Lyon, UCBL, ENSL, CNRS, UMR 5276 LGL-TPE, 2 rue Raphaël Dubois, F- 8 69622 Villeurbanne, France 9 2 Université de Bourgogne - Franche Comté, CNRS, UMR 6282 Biogéosciences, 6 boulevard 10 Gabriel, F-2100 Dijon, France 11 3 Corresponding author, E-mail: [email protected] 12 13 Abstract 14 Bolboporites is an enigmatic Ordovician cone-shaped fossil, the precise nature and systematic affinities of 15 which have been controversial over almost two centuries. -
Echinodermata) and Their Permian-Triassic Origin
Molecular Phylogenetics and Evolution 66 (2013) 161-181 Contents lists available at SciVerse ScienceDirect FHYLÖGENETICS a. EVOLUTION Molecular Phylogenetics and Evolution ELSEVIER journal homepage:www.elsevier.com/locate/ympev Fixed, free, and fixed: The fickle phylogeny of extant Crinoidea (Echinodermata) and their Permian-Triassic origin Greg W. Rouse3*, Lars S. Jermiinb,c, Nerida G. Wilson d, Igor Eeckhaut0, Deborah Lanterbecq0, Tatsuo 0 jif, Craig M. Youngg, Teena Browning11, Paula Cisternas1, Lauren E. Helgen-1, Michelle Stuckeyb, Charles G. Messing k aScripps Institution of Oceanography, UCSD, 9500 Gilman Drive, La Jolla, CA 92093, USA b CSIRO Ecosystem Sciences, GPO Box 1700, Canberra, ACT 2601, Australia c School of Biological Sciences, The University of Sydney, NSW 2006, Australia dThe Australian Museum, 6 College Street, Sydney, NSW 2010, Australia e Laboratoire de Biologie des Organismes Marins et Biomimétisme, University of Mons, 6 Avenue du champ de Mars, Life Sciences Building, 7000 Mons, Belgium fNagoya University Museum, Nagoya University, Nagoya 464-8601, Japan s Oregon Institute of Marine Biology, PO Box 5389, Charleston, OR 97420, USA h Department of Climate Change, PO Box 854, Canberra, ACT 2601, Australia 1Schools of Biological and Medical Sciences, FI 3, The University of Sydney, NSW 2006, Sydney, Australia * Department of Entomology, NHB E513, MRC105, Smithsonian Institution, NMNH, P.O. Box 37012, Washington, DC 20013-7012, USA k Oceanographic Center, Nova Southeastern University, 8000 North Ocean Drive, Dania Beach, FL 33004, USA ARTICLE INFO ABSTRACT Añicle history: Although the status of Crinoidea (sea lilies and featherstars) as sister group to all other living echino- Received 6 April 2012 derms is well-established, relationships among crinoids, particularly extant forms, are debated. -
Zoogeography of Tropical Western Atlantic Crinoidea (Echinodermata) David L
Nova Southeastern University NSUWorks Oceanography Faculty Articles Department of Marine and Environmental Sciences 7-1-1978 Zoogeography of Tropical Western Atlantic Crinoidea (Echinodermata) David L. Meyer University of Cincinnati - Main Campus Charles G. Messing University of Miami, [email protected] Donald B. Macurda Jr. University of Michigan - Ann Arbor Find out more information about Nova Southeastern University and the Oceanographic Center. Follow this and additional works at: http://nsuworks.nova.edu/occ_facarticles Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Recommended Citation Meyer, David L., Charles G. Messing, and Donald B. Macurda Jr. "Biological results of the University of Miami deep-sea expeditions. 129. Zoogeography of tropical western Atlantic Crinoidea (Echinodermata)." Bulletin of Marine Science 28, no. 3 (1978): 412-441. This Article is brought to you for free and open access by the Department of Marine and Environmental Sciences at NSUWorks. It has been accepted for inclusion in Oceanography Faculty Articles by an authorized administrator of NSUWorks. For more information, please contact [email protected]. BULLETIN OF MARINE SCIENCE, 28(3): 412-441, 1978 BIOLOGICAL RESULTS OF THE UNIVERSITY OF MTAMI DEEP-SEA EXPEDITIONS. 129. ZOOGEOGRAPHY OF TROPICAL WESTERN ATLANTIC CRINOIDEA (ECHINODERMATA) David L. Meyer, Charles G. Messing, and Donald B. Macurda, Jr. ABSTRACT Recent collcctions of crinoids from the intertidal zone to ],650 m in the tropical western Atlantic have provided significant range extensions for more than half of the 44 comatulid and stalked species known from the region. Of the 34 comatulid species, over 60% are endemic to the region; of the 10 stalked species, 90% are endemic. -
Isocrinid Crinoids from the Late Cenozoic of Jamaica
A tlantic G eology 195 Isocrinid crinoids from the late Cenozoic of Jamaica Stephen K. Donovan Department of Geology, University of the West Indies, Mona, Kingston 7, Jamaica Date Received April 8, 1994 Date A ccepted A ugust 26, 1994 Eight species of isocrinines have been documented from the Lower Cretaceous to Pleistocene of Jamaica. New finds include a second specimen of a Miocene species from central north Jamaica, previously regarded as Diplocrinus sp. but reclassified as Teliocrinus? sp. herein. Extant Teliocrinus is limited to the Indian Ocean, although Miocene specimens have been recorded from Japan, indicating a wider distribution during the Neogene. One locality in the early Pleistocene Manchioneal Formation of eastern Jamaica has yielded three species of isocrinine, Cenocrirtus asterius (Linne), Diplocrinus maclearanus (Thomson) and Neocrinus decorus Thomson. These occur in association with the bourgueticrinine Democrinus sp. or Monachocrinus sp. These taxa are all extant and suggest a minimum depositional depth for the Manchioneal Formation at this locality of about 180 m. This early Pleistocene fauna represents the most diverse assemblage of fossil crinoids docu mented from the Antillean region. Huit especes d’isocrinines de la periode du Cretace inferieur au Pleistocene de la Jamai'que ont ete documentees. Les nouvelles decouvertes comprennent un deuxieme specimen d’une espece du Miocene du nord central de la Jamai'que, auparavant consideree comme l’espece Diplocrinus, mais reclassifiee en tant que Teliocrinus? aux presentes. Le Teliocrinus existant est limite a l’ocean Indien, meme si on a releve des specimens du Miocene au Japon, ce qui est revelateur d’une distribution plus repandue au cours du Neogene.