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Morphological Characterization and Dna
MORPHOLOGICAL CHARACTERIZATION AND DNA FINGERPRINTING OF A PRASINOPHYTE FLAGELLATE ISOLATED FROM KERLA COAST BY KANCHAN SHASHIKANT NASARE DIVISION OF BIOCHEMICAL SCIENCES NATIONAL CHEMICAL LABORATORY PUNE-411008, INDIA 2002 MORPHOLOGICAL CHARACTERIZATION AND DNA FINGERPRINTING OF A PRASINOPHYTE FLAGELLATE ISOLATED FROM KERALA COAST A THESIS SUBMITTED TO THE UNIVERSITY OF PUNE FOR THE DEGREE OF DOCTOR OF PHILOSOPHY (IN BOTANY) BY KANCHAN SHASHIKANT NASARE DIVISION OF BIOCHEMICAL SCIENCES NATIONAL CHEMICAL LABORATORY PUNE-411008, INDIA. October 20002 DEDICATED TO MY FAMILY TABLE OF CONTENTS Page No. Declaration I Acknowledgement II Abbreviations III Abstract IV-VIII Chapter 1: General Introduction 1-19 Chapter2: Morphological characterization of a prasinophyte 20-43 flagellate isolated from Kochi backwaters Abstract 21 Introduction 21 Materials and Methods 23 Materials 23 Methods 23 Growth medium 23 Optimization of culture conditions 25 Pigment analysis 26 Light and electron microscopy 26 Results and Discussion Culture conditions 28 Pigment analysis 31 Light microscopy 32 Scanning electron microscopy 35 Transmission electron microscopy 36 Chapter 3: Phylogenetic placement of the Kochi isolate 44-67 among prasinophytes and other green algae using 18S ribosomal DNA sequences Abstract 45 Introduction 45 Materials and Methods 47 Materials 47 Methods 47 DNA isolation 47 Amplification of 18S rDNA 48 Sequencing of 18S rDNA 48 Sequence analysis 49 Results and Discussion 50 Chapter 4: DNA fingerprinting of the prasinophyte 68-101 flagellate isolated -
(12) Patent Application Publication (10) Pub. No.: US 2010/0081177 A1 Schatz Et Al
US 20100081177A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2010/0081177 A1 Schatz et al. (43) Pub. Date: Apr. 1, 2010 (54) DECREASING RUBISCO CONTENT OF Publication Classification ALGAE AND CYANOBACTERIA (51) Int. Cl CULTIVATED IN HIGH CARBON DOXDE CI2P 7/64 (2006.01) (75) Inventors: Daniella Schatz, Givataim (IL); CI2P I/04 (2006.01) Jonathan Gressel, Rehovot (IL); CI2P I/00 (2006.01) Doron Eisenstadt, Haifa (IL); Shai CI2N I/2 (2006.01) Ufaz, Givat Ada (IL) CI2N 15/74 (2006.01) Correspondence Address: CI2N I/3 (2006.01) DODDS & ASSOCATES 1707 NSTREET NW (52) U.S. Cl. ........ 435/134:435/170; 435/41; 435/252.3: WASHINGTON, DC 20036 (US) 435/471; 435/257.2 (73) Assignee: TransAlgae Ltd, Rehovot (IL) (21) Appl. No.: 12/584,571 (57) ABSTRACT (22) Filed: Sep. 8, 2009 Algae and cyanobacteria are genetically engineered to have Related U.S. Application Data lower RUBISCO (ribulose-1,5-bisphosphate carboxylase/ oxygenase) content in order to grow more efficiently at (60) Provisional application No. 61/191,169, filed on Sep. elevated carbon dioxide levels while recycling industrial CO, 5, 2008, provisional application No. 61/191,453, filed emissions back to products, and so as not to be able to grow on Sep. 9, 2008. outside of cultivation. 38:8 3xxx. :33.33. 3:38 :::::::::: Patent Application Publication Apr. 1, 2010 Sheet 1 of 2 US 2010/0081177 A1 *:::::::: Patent Application Publication Apr. 1, 2010 Sheet 2 of 2 US 2010/0081177 A1 | 8 psi-rics AS s s 8:33:3:$33:38 US 2010/0081177 A1 Apr. -
Improved Protocol for the Preparation of Tetraselmis Suecica Axenic
36 The Open Biotechnology Journal, 2010, 4, 36-46 Open Access Improved Protocol for the Preparation of Tetraselmis suecica Axenic Culture and Adaptation to Heterotrophic Cultivation Mojtaba Azma1, Rosfarizan Mohamad1, Raha Abdul Rahim2 and Arbakariya B. Ariff*,1 1Department of Bioprocess Technology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia 2Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia Abstract: The effectiveness of various physical and chemical methods for the removal of contaminants from the microal- gae, Tetraselmis suecica, culture was investigated. The information obtained was used as the basis for the development of improved protocol for the preparation of axenic culture to be adapted to heterotrophic cultivation. Repeated centrifugation and rinsing effectively removed the free bacterial contaminants from the microalgae culture while sonication helped to loosen up the tightly attached bacterial contaminants on the microalgae cells. Removal of bacterial spores was accom- plished using a mixture of two antibiotics, 5 mg/mL vancomycine and 10 mg/mL neomycine. Walne medium formulation with natural seawater was preferred for the enhancement of growth of T. suecica. Adaptation of growth from photoautot- rophic to heterotrophic conditions was achieved by the repeated cultivation of photoautotrophic culture with sequential reduction in illumination time, and finally the culture was inoculated into the medium containing 10 g/L glucose, incu- bated in total darkness to obtain heterotrophic cells. Changes in the morphology and composition of T. suecica cells dur- ing the adaptation from photoautotrophic to heterotrophic condition, as examined under Transmission Electron Micro- scope, were also reported. -
"Phycology". In: Encyclopedia of Life Science
Phycology Introductory article Ralph A Lewin, University of California, La Jolla, California, USA Article Contents Michael A Borowitzka, Murdoch University, Perth, Australia . General Features . Uses The study of algae is generally called ‘phycology’, from the Greek word phykos meaning . Noxious Algae ‘seaweed’. Just what algae are is difficult to define, because they belong to many different . Classification and unrelated classes including both prokaryotic and eukaryotic representatives. Broadly . Evolution speaking, the algae comprise all, mainly aquatic, plants that can use light energy to fix carbon from atmospheric CO2 and evolve oxygen, but which are not specialized land doi: 10.1038/npg.els.0004234 plants like mosses, ferns, coniferous trees and flowering plants. This is a negative definition, but it serves its purpose. General Features Algae range in size from microscopic unicells less than 1 mm several species are also of economic importance. Some in diameter to kelps as long as 60 m. They can be found in kinds are consumed as food by humans. These include almost all aqueous or moist habitats; in marine and fresh- the red alga Porphyra (also known as nori or laver), an water environments they are the main photosynthetic or- important ingredient of Japanese foods such as sushi. ganisms. They are also common in soils, salt lakes and hot Other algae commonly eaten in the Orient are the brown springs, and some can grow in snow and on rocks and the algae Laminaria and Undaria and the green algae Caulerpa bark of trees. Most algae normally require light, but some and Monostroma. The new science of molecular biology species can also grow in the dark if a suitable organic carbon has depended largely on the use of algal polysaccharides, source is available for nutrition. -
Proceedings of National Seminar on Biodiversity And
BIODIVERSITY AND CONSERVATION OF COASTAL AND MARINE ECOSYSTEMS OF INDIA (2012) --------------------------------------------------------------------------------------------------------------------------------------------------------- Patrons: 1. Hindi VidyaPracharSamiti, Ghatkopar, Mumbai 2. Bombay Natural History Society (BNHS) 3. Association of Teachers in Biological Sciences (ATBS) 4. International Union for Conservation of Nature and Natural Resources (IUCN) 5. Mangroves for the Future (MFF) Advisory Committee for the Conference 1. Dr. S. M. Karmarkar, President, ATBS and Hon. Dir., C B Patel Research Institute, Mumbai 2. Dr. Sharad Chaphekar, Prof. Emeritus, Univ. of Mumbai 3. Dr. Asad Rehmani, Director, BNHS, Mumbi 4. Dr. A. M. Bhagwat, Director, C B Patel Research Centre, Mumbai 5. Dr. Naresh Chandra, Pro-V. C., University of Mumbai 6. Dr. R. S. Hande. Director, BCUD, University of Mumbai 7. Dr. Madhuri Pejaver, Dean, Faculty of Science, University of Mumbai 8. Dr. Vinay Deshmukh, Sr. Scientist, CMFRI, Mumbai 9. Dr. Vinayak Dalvie, Chairman, BoS in Zoology, University of Mumbai 10. Dr. Sasikumar Menon, Dy. Dir., Therapeutic Drug Monitoring Centre, Mumbai 11. Dr, Sanjay Deshmukh, Head, Dept. of Life Sciences, University of Mumbai 12. Dr. S. T. Ingale, Vice-Principal, R. J. College, Ghatkopar 13. Dr. Rekha Vartak, Head, Biology Cell, HBCSE, Mumbai 14. Dr. S. S. Barve, Head, Dept. of Botany, Vaze College, Mumbai 15. Dr. Satish Bhalerao, Head, Dept. of Botany, Wilson College Organizing Committee 1. Convenor- Dr. Usha Mukundan, Principal, R. J. College 2. Co-convenor- Deepak Apte, Dy. Director, BNHS 3. Organizing Secretary- Dr. Purushottam Kale, Head, Dept. of Zoology, R. J. College 4. Treasurer- Prof. Pravin Nayak 5. Members- Dr. S. T. Ingale Dr. Himanshu Dawda Dr. Mrinalini Date Dr. -
Better Off Alone? New Insights in the Symbiotic Relationship Between the Flatworm Symsagittifera Roscoffensis and the Microalgae Tetraselmis Convolutae
Symbiosis https://doi.org/10.1007/s13199-020-00691-y Better off alone? New insights in the symbiotic relationship between the flatworm Symsagittifera roscoffensis and the microalgae Tetraselmis convolutae Thibault Androuin1,2 & Christophe Six2 & François Bordeyne2 & Florian de Bettignies2 & Fanny Noisette1 & Dominique Davoult2 Received: 2 November 2019 /Accepted: 9 June 2020 # Springer Nature B.V. 2020 Abstract The acoel flatworm Symsagittifera roscoffensis lives in obligatory symbiosis with the microalgal chlorophyte Tetraselmis convolutae. Although this interaction has been studied for more than a century, little is known on the potential reciprocal benefits of both partners, a subject that is still controversial. In order to provide new insights into this question, we have compared the photophysiology of the free-living microalgae to the symbiotic form in the flatworm, both acclimated at different light irradi- ances. Photosynthesis – Irradiance curves showed that the free-living T. convolutae had greater photosynthetic performance (i.e., oxygen production rates, ability to harvest light) than their symbiotic form, regardless of the light acclimation. However, they were affected by photoinhibition under high irradiances, which did not happen for the symbiotic form. The resistance of symbiotic microalgae to photoinhibition were corroborated by pigment analyses, which evidenced the induction of photoprotective mechanisms such as xanthophyll cycle as well as lutein and β-carotene accumulation. These processes were induced even under low light acclimation and exacerbated upon high light acclimation, suggesting a global stress situation for the symbiotic microalgae. We hypothesize that the internal conditions in the sub-epidermal zone of the flatworm (e.g., osmotic and pH), as well as the phototaxis toward high light imposed by the worm in its environment, would be major reasons for this chronic stress situation. -
An Unrecognized Ancient Lineage of Green Plants Persists in Deep Marine Waters
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©2010 Phycological Society of America. This manuscript is an author version with the final publication available at http://www.wiley.com/WileyCDA/ and may be cited as: Zechman, F. W., Verbruggen, H., Leliaert, F., Ashworth, M., Buchheim, M. A., Fawley, M. W., Spalding, H., Pueschel, C. M., Buchheim, J. A., Verghese, B., & Hanisak, M. D. (2010). An unrecognized ancient lineage of green plants persists in deep marine waters. Journal of Phycology, 46(6), 1288‐1295. (Suppl. material). doi:10.1111/j.1529‐8817.2010.00900.x J. Phycol. 46, 1288–1295 (2010) Ó 2010 Phycological Society of America DOI: 10.1111/j.1529-8817.2010.00900.x AN UNRECOGNIZED ANCIENT LINEAGE OF GREEN PLANTS PERSISTS IN DEEP MARINE WATERS1 Frederick W. Zechman2,3 Department of Biology, California State University Fresno, 2555 East San Ramon Ave, Fresno, California 93740, USA Heroen Verbruggen,3 Frederik Leliaert Phycology Research Group, Ghent University, Krijgslaan 281 S8, 9000 Ghent, Belgium Matt Ashworth University Station MS A6700, 311 Biological Laboratories, University of Texas at Austin, Austin, Texas 78712, USA Mark A. Buchheim Department of Biological Science, University of Tulsa, Tulsa, Oklahoma 74104, USA Marvin W. Fawley School of Mathematical and Natural Sciences, University of Arkansas at Monticello, Monticello, Arkansas 71656, USA Department of Biological Sciences, North Dakota State University, Fargo, North Dakota 58105, USA Heather Spalding Botany Department, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA Curt M. Pueschel Department of Biological Sciences, State University of New York at Binghamton, Binghamton, New York 13901, USA Julie A. -
Collection of Marine Research Works, 2000, X: 173-182
The effects of certain ecological factors on the growth of Tetraselmis sp. in laboratory Item Type Journal Contribution Authors Ha, Le Thi Loc Download date 02/10/2021 15:58:25 Link to Item http://hdl.handle.net/1834/9281 Collection of Marine Research Works, 2000, X: 173-182 THE EFFECTS OF CERTAIN ECOLOGICAL FACTORS ON THE GROWTH OF TETRASELMIS SP. IN LABORATORY Ha Le Thi Loc Institute of Oceanography ABSTRACT The green alga, Tetraselmis sp., contain relatively large amounts of valuable lipids and are commonly used as food source for commercial application in aquaculture. In this study we evaluated the effect of certain ecological factors such as light intensity, temperature, salinity, initial density, phosphate and nitrogen concentration on the growth of Tetraselmis sp. which continuously grew under laboratory-controlled conditions, aimed to apply these results for mass-culture of Tetraselmis sp. in aquaculture hatcheries. Tetraselmis sp. tolerates to a broad range of salinity and prefers high salinity at 35-45 ppt. The best suitable initial density for algal growth was about 15-20 x 104 cells/ml. The best temperature for the Tetraselmis sp. growth was 28oC. The suitable fluorescent light intensities were from 150-200 mol s-1m-2. In F/ (Guillard 1975) medium, the critical 2 range of N concentration for growth of the algae was from 7.36 – 22.36 mg/l, the optimum phosphate concentration for growth were from 0.77 –3.27 mg/l. AÛNH HÖÔÛNG CUÛA MOÄT SOÁ YEÁU TOÁ SINH THAÙI LEÂN TAÊNG TRÖÔÛNG TAÛO TETRASELMIS SP. TRONG PHOØNG THÍ NGHIEÄM Haø Leâ Thò Loäc Vieän Haûi Döông Hoïc TOÙM TAÉT Tetraselmis sp. -
Oceanic Mixotrophic Flatworms*
MARINE ECOLOGY PROGRESS SERIES Vol. 58: 41-51, 1989 Published December 15 1 Mar. Ecol. Prog. Ser. Oceanic mixotrophic flatworms* ' Biology Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, USA Department of Marine Biology, University of Bergen, N-5065 Blomsterdalen, Norway Department of Zoology, University of Maine, Orono, Maine 04469, USA ABSTRACT Most reports of photosynthetic flatworms are from benthic or littoral habitats, but small (< 1 mm) acoel flatworms with algal endosymbionts are a widespread, though sporadic component of the open-ocean plankton in warm waters Among oceanic flatworms are specimens harbor~ng prasinophyte or less commonly, dinophyte endosymbionts Photosynthesis was measured by I4C uptake in flatworms from shelf/slope waters in the western north Atlantlc and from the Sargasso Sea Rates were as high as 27 ng C fixed ind -' h-' Assimilation ratios ranged from 0 9 to 1 3 ng C fixed (ng Chlorophyll a)-' h-' Although these acoels were photosynthetic, they were also predatory on other plankton Remains of crustaceans and radiolanan central capsules were observed in the guts or fecal material of some specimens These acoel-algal associations apparently depend on both autotrophic and heterotrophic nutrition and are thus mixotrophic Among the planktonic protozoa, mixotrophy is a common nutnbonal strategy, it also appears to be common strategy among certain taxa of open-ocean metazoa INTRODUCTION pelagica, C, schultzei, and Adenopea illardatus (Lohner & Micoletzky 1911, Dorjes 1970). Acoel -
Les Algues Vertes (Phylum Viridiplantae) Sont-Elles Vieilles De Deux Milliards D'années ?.- Carnets De Géologie, Brest, Livre 2006/01 (CG2006 B01), 162 P., 7 Tableaux
Bernard TEYSSÈDRE Les algues vertes (phylum Viridiplantae), sont-elles vieilles de deux milliards d'années ? ISBN 2-916733-00-0 "Dépôt légal à parution" Manuscrit en ligne depuis le 26 Septembre 2006 Carnets de Géologie (2006 : Livre 1 - Book 1) B. TEYSSÈDRE 10 rue Véronèse 75013 Paris (France) ISBN 2-916733-00-0 Dépôt légal à parution Manuscrit en ligne depuis le 26 Septembre 2006 Carnets de Géologie (2006 : Livre 1 - Book 1) Préface Bernard TEYSSÈDRE est professeur émérite, ancien directeur d'une unité CNRS/Université de Paris en Sciences Humaines et Sociales. Il a dirigé une École doctorale en Arts et Sciences de l'Art et l'Institut d'Esthétique des Arts contemporains. Docteur en Histoire et en Philosophie, son dessein profond est la quête des sources, celle de notre imaginaire avec ses ouvrages sur la Naissance du Diable et de l'Enfer, de Babylone aux grottes de la Mer Morte ou sur les Anges, les Astres et les Cieux, comme celle des débuts de toute forme de vie. Avec une surprenante fiction politico-romanesque autour du sulfureux tableau de COURBET l'Origine du Monde, pensait-il déjà à l'enquête qu'il allait mener sur les temps où la vie se cachait, "La vie invisible" où il passe de l'archéologie de nos croyances à la quête scientifique de nos origines ? Passionné depuis toujours par les Sciences de l’Évolution, il possède sur les fossiles et leur descendants des connaissances quasi- encyclopédiques que bien des spécialistes peuvent lui envier. L'étude des trois premiers milliards d'années de l’histoire de la vie est récente et en pleine évolution. -
Saline Microalgae for Biofuels: Outdoor Culture from Small-Scale to Pilot Scale
SALINE MICROALGAE FOR BIOFUELS: OUTDOOR CULTURE FROM SMALL-SCALE TO PILOT SCALE Andreas Isdepsky DIPL.-ING. (BIOTECH) This thesis is presented for the degree of Doctor of Philosophy of Murdoch University, Western Australia 2015 DECLARATION I declare that this thesis is my own account of my research and contains as its main content work which has not previously been submitted for a degree at any tertiary education institution. Andreas Isdepsky ii “Do not go where the path may lead, go instead where there is no path and leave a trail.” Ralph Waldo Emerson iii ABSTRACT Three local isolates of the green alga Tetraselmis sp. identified as the most promising microalgae species for outdoor mass cultivation with high potential for biodiesel production due to high amounts of total lipids and high lipid productivity were employed in this study. The aim of the study was to compare three halophilic Tetraselmis strains (Tetraselmis MUR-167, MUR-230 and MUR-233) grown in open raceway ponds over long periods with respect to their specific growth rate and lipid productivity without additional CO2 and with CO2 addition regulated at pH 7.5 by using a pH-stat system. Attention also was given to the overall culture condition including contaminating organisms, biofilm development due to cell adhesion and cell clump formation. All tested Tetraselmis strains in this study were successfully grown outdoors in open raceway ponds in hypersaline fertilised medium at 7 % w/v NaCl over a period of more than two years. A marked effect of CO2 addition on growth and productivities was observed at high solar irradiance and temperatures between 15 – 33 oC. -
Lab-On-A-Chip for Chlorophyll Analysis and Identification of Phytoplankton Taxonomic Groups
Lab-on-a-chip for chlorophyll analysis and identification of phytoplankton taxonomic groups Denise A. M. Carvalho1, Vânia C. Pinto1, Paulo J. Sousa1, Emilio Fernández2, Luís M. Gonçalves1, Graça Minas1 1 MEMS-UMinho Research Unit, DEI, University of Minho, Campus de Azurém, 4800-058 Guimarães, Portugal 2 Grupo de Oceanografía Biolóxica, Faculty of Marine Science, 36310 Universidade de Vigo, Spain Introduction This work presents the optical properties (absorbance, dispersion and fluorescence) of several phytoplankton species, towards the development of a portable and low-cost lab-on-a-chip able to quantify and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that promotes better identification of phytoplankton is also presented. A proof-of-concept device was fabricated, with LED light excitation at 450 nm and detected at 680 nm by a photodiode, for quantifying the concentration of phytoplankton chlorophyll. A lock-in amplifier was developed and integrated in a portable and low-cost circuit sensor, featuring continuous, autonomous and in-situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll, in a range above 300 µg/L, with a linear response. Materials and methods Single cell analysis • Six laboratory cultures of non-toxic phytoplankton, representing five Figure shows the results of the size versus complexity obtained with the divisions, were selected for this study. flow cytometer for each of the selected phytoplankton species. The forward • The optical properties of the selected species were obtained with scatter (FS in y-axis of figure) represents the size of cell and the side commercial equipment, namely absorption, fluorescence, and single-cell scatter (SS in y-axis) the regards the granularity and complexity of the cell.