Improved Protocol for the Preparation of Tetraselmis Suecica Axenic
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Establish Axenic Cultures of Armored and Unarmored Marine
www.nature.com/scientificreports OPEN Establish axenic cultures of armored and unarmored marine dinofagellate species using density separation, antibacterial treatments and stepwise dilution selection Thomas Chun‑Hung Lee1, Ping‑Lung Chan1, Nora Fung‑Yee Tam2, Steven Jing‑Liang Xu1 & Fred Wang‑Fat Lee1* Academic research on dinofagellate, the primary causative agent of harmful algal blooms (HABs), is often hindered by the coexistence with bacteria in laboratory cultures. The development of axenic dinofagellate cultures is challenging and no universally accepted method suit for diferent algal species. In this study, we demonstrated a promising approach combined density gradient centrifugation, antibiotic treatment, and serial dilution to generate axenic cultures of Karenia mikimotoi (KMHK). Density gradient centrifugation and antibiotic treatments reduced the bacterial population from 5.79 ± 0.22 log10 CFU/mL to 1.13 ± 0.07 log10 CFU/mL. The treated KMHK cells were rendered axenic through serial dilution, and algal cells in diferent dilutions with the absence of unculturable bacteria were isolated. Axenicity was verifed through bacterial (16S) and fungal internal transcribed spacer (ITS) sequencing and DAPI epifuorescence microscopy. Axenic KMHK culture regrew from 1000 to 9408 cells/mL in 7 days, comparable with a normal culture. The established methodology was validated with other dinofagellate, Alexandrium tamarense (AT6) and successfully obtained the axenic culture. The axenic status of both cultures was maintained more than 30 generations without antibiotics. This efcient, straightforward and inexpensive approach suits for both armored and unarmored dinofagellate species. Te frequency of harmful algal blooms (HABs) has been increasing worldwide over the past decades, which have major economic efects on fsh farming, the shellfsh industry, as well as human health 1,2. -
Culture Under Normoxic Conditions and Enhanced Virulence of Phase II Coxiella
bioRxiv preprint doi: https://doi.org/10.1101/747220; this version posted August 28, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Culture under normoxic conditions and enhanced virulence of phase II Coxiella 2 burnetii transformed with a RSF1010-based shuttle vector 3 4 Shengdong Luo1,2#, Zemin He2#, Zhihui Sun2, Yonghui Yu2, Yongqiang Jiang2, Yigang 5 Tong1*, Lihua Song1* 6 7 1Beijing Advanced Innovation Center for Soft Matter Science and Engineering, 8 Beijing University of Chemical Technology, Beijing, 100029, China; 2State Key 9 Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and 10 Epidemiology, Beijing 100071, China 11 12 #These authors contributed equally. 13 *Corresponding author. Lihua Song ([email protected]); Yigang Tong 14 ([email protected]) 15 16 Keywords: Coxiella burnetii, microaerobic, normoxia, hypoxia, splenomegaly 17 18 Running title: Normoxic growth of Coxiella burnetii 19 bioRxiv preprint doi: https://doi.org/10.1101/747220; this version posted August 28, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 20 Abstract 21 Coxiella burnetii is a Gram-negative, facultative intracellular microorganism that can 22 cause acute or chronic Q fever in human. It was recognized as an obligate intracellular 23 organism until the revolutionary design of an axenic cystine culture medium (ACCM). -
Gc – Ms) Analysis
Academic Sciences International Journal of Pharmacy and Pharmaceutical Sciences ISSN- 0975-1491 Vol 5, Issue 3, 2013 Research Article EVALUATION OF ANTIMICROBIAL METABOLITES FROM MARINE MICROALGAE TETRASELMIS SUECICA USING GAS CHROMATOGRAPHY – MASS SPECTROMETRY (GC – MS) ANALYSIS V. DOOSLIN MERCY BAI1 AND S. KRISHNAKUMAR2* 1Department of Biomedical Engineering Rajiv Gandhi College of Enginnering and Technology.Puducherry 607402, India, 2Department of Biomedical Engineering, Sathyabama University, Chennai 600119, Tamil Nadu, India. Email: [email protected] Received: 15 Mar 2013, Revised and Accepted: 23 Apr 2013 ABSTRACT Objective: Marine natural products have been considered as one of the most promising sources of antimicrobial compounds in recent years. Marine microalgae Tetraselmis suecica (Kylin) was selected for the present antimicrobial investigation. Methods: The effects of pH, temperature and salinity were tested for the growth of microalgae. The antibacterial effect of different solvent extracts of marine microalgae Tetraselmis suecica against selected human pathogens such as Vibrio cholerae, Klebsiella pneumoniae, Escherichia coli, Pseudomonas aeruginosa, Salmonella sp, Proteus sp., Streptococcus pyogens, Staphylococcus aureus, Bacillus megaterium and Bacillus subtilis were investigated. The GC-MS analysis was done with standard specification to identify the active principle of bioactive compound. Results: The highest cell density was observed when the medium adjusted with 40ppt of salinity in pH of 9.0 at 250C during 9th day of incubation period. Methanol + chloroform (1:1) crude extract of Tetraselmis suecica was confirmed considerable activity against gram negative bacteria than gram positive human pathogen. GC-MS analysis revealed the presence of unique chemical compounds like 1-ethyl butyl 3-hexyl hydroperoxide (MW: 100) and methyl heptanate (MW: 186) respectively for the crude extract of Tetraselmis suecica. -
Microbiota Alter Metabolism and Mediate Neurodevelopmental Toxicity of 17Β-Estradiol Received: 19 October 2018 Tara R
www.nature.com/scientificreports OPEN Microbiota alter metabolism and mediate neurodevelopmental toxicity of 17β-estradiol Received: 19 October 2018 Tara R. Catron1, Adam Swank2, Leah C. Wehmas 3, Drake Phelps1, Scott P. Keely4, Accepted: 18 April 2019 Nichole E. Brinkman4, James McCord1, Randolph Singh1, Jon Sobus5, Charles E. Wood3,6, Published: xx xx xxxx Mark Strynar5, Emily Wheaton4 & Tamara Tal 3 Estrogenic chemicals are widespread environmental contaminants associated with diverse health and ecological efects. During early vertebrate development, estrogen receptor signaling is critical for many diferent physiologic responses, including nervous system function. Recently, host-associated microbiota have been shown to infuence neurodevelopment. Here, we hypothesized that microbiota may biotransform exogenous 17-βestradiol (E2) and modify E2 efects on swimming behavior. Colonized zebrafsh were continuously exposed to non-teratogenic E2 concentrations from 1 to 10 days post-fertilization (dpf). Changes in microbial composition and predicted metagenomic function were evaluated. Locomotor activity was assessed in colonized and axenic (microbe-free) zebrafsh exposed to E2 using a standard light/dark behavioral assay. Zebrafsh tissue was collected for chemistry analyses. While E2 exposure did not alter microbial composition or putative function, colonized E2- exposed larvae showed reduced locomotor activity in the light, in contrast to axenic E2-exposed larvae, which exhibited normal behavior. Measured E2 concentrations were signifcantly higher in axenic relative to colonized zebrafsh. Integrated peak area for putative sulfonated and glucuronidated E2 metabolites showed a similar trend. These data demonstrate that E2 locomotor efects in the light phase are dependent on the presence of microbiota and suggest that microbiota infuence chemical E2 toxicokinetics. -
The Design and Construction of an Axenic System, and the Survival
THE DESIGN AND CONSTRUCTION OF AN AXENIC SYSTEM, AND THE SURVIVAL, GROWTH, AND BASELINE MICROBIAL LOAD OF THE REARING ENVIRONMENT, FOOD SOURCE AND INTERNAL MICROBIOTA OF A CICHLID FISH By Jeffry Tyler Hayes Undergraduate Honors Thesis Presented in partial fulfillment of the requirements for the degree of Bachelor of Science in Environment and Natural Resources with Honors Research Distinction in the School of Environment and Natural Resources, of The Ohio State University. The Ohio State University College of Food, Agricultural, and Environmental Sciences School of Environment and Natural Resources 2017 Thesis Committee: Dr. Konrad Dabrowski Dr. Richard Dick Dr. William Peterman “A self-denial, no less austere than the saint's, is demanded of the scholar. He must worship truth, and forgo all things for that, and choose defeat and pain, so that his treasure in thought is thereby augmented.” ~ Ralph Waldo Emerson Abstract A novel axenic apparatus was designed and constructed for use as a research platform in germ-free fish larvae culture and the development of antibiotic alternatives. The system contains many innovations to the systems most used in germ-free aquaculture research today. Using a cichlid (Synspilum) species and a cichlid hybrid (Synspilum x Amphilophus), the system was tested under holoxenic conditions to ensure that fish can survive in such an apparatus. The system has six chambers, of which three were stocked with Synspilum and three with the hybrid (n=15 each). Two control tanks were set up and one was stocked with the Synspilum and one with the hybrid (n=45 each). The experiment was run for a duration of 16 days. -
"Phycology". In: Encyclopedia of Life Science
Phycology Introductory article Ralph A Lewin, University of California, La Jolla, California, USA Article Contents Michael A Borowitzka, Murdoch University, Perth, Australia . General Features . Uses The study of algae is generally called ‘phycology’, from the Greek word phykos meaning . Noxious Algae ‘seaweed’. Just what algae are is difficult to define, because they belong to many different . Classification and unrelated classes including both prokaryotic and eukaryotic representatives. Broadly . Evolution speaking, the algae comprise all, mainly aquatic, plants that can use light energy to fix carbon from atmospheric CO2 and evolve oxygen, but which are not specialized land doi: 10.1038/npg.els.0004234 plants like mosses, ferns, coniferous trees and flowering plants. This is a negative definition, but it serves its purpose. General Features Algae range in size from microscopic unicells less than 1 mm several species are also of economic importance. Some in diameter to kelps as long as 60 m. They can be found in kinds are consumed as food by humans. These include almost all aqueous or moist habitats; in marine and fresh- the red alga Porphyra (also known as nori or laver), an water environments they are the main photosynthetic or- important ingredient of Japanese foods such as sushi. ganisms. They are also common in soils, salt lakes and hot Other algae commonly eaten in the Orient are the brown springs, and some can grow in snow and on rocks and the algae Laminaria and Undaria and the green algae Caulerpa bark of trees. Most algae normally require light, but some and Monostroma. The new science of molecular biology species can also grow in the dark if a suitable organic carbon has depended largely on the use of algal polysaccharides, source is available for nutrition. -
Influence of Bacteria on Cell Size Development and Morphology Of
Erschienen in: Phycological Research ; 62 (2014), 4. - S. 269-281 Influence of bacteria on cell size development and morphology of cultivated diatoms Miriam Windler,1* Dariia Bova,1 Anastasiia Kryvenda,2 Dietmar Straile,3 Ansgar Gruber1 and Peter G. Kroth1 1Pflanzliche Ökophysiologie, Fachbereich Biologie, Universität Konstanz, Konstanz, 2Abteilung Experimentelle Phykologie und Sammlung von Algenkulturen (EPSAG), Göttingen, and 3Limnologisches Institut, Universität Konstanz, Konstanz, Germany other daughter cell is smaller (Chepurnov et al. 2004). SUMMARY This effect, known as the MacDonald–Pfitzer rule (MacDonald 1869; Pfitzer 1871) causes a gradual Vegetative cell division in diatoms often results in a reduction of the median cell size of a culture, with a few decreased cell size of one of the daughter cells, which known exceptions: Eunotia minus (Kützing) Grunow during long-term cultivation may lead to a gradual (Geitler 1932), Adlafia minuscula var. muralis (Grunow) decrease of the mean cell size of the culture. To restore Lange-Bertalot (Locker 1950), Nitzschia paleacea the initial cell size, sexual reproduction is required, Grunow, Nitzschia palea var. debilis (Kützing) Grunow however, in many diatom cultures sexual reproduction (Wiedling 1948) and Phaeodactylum tricornutum does not occur. Such diatom cultures may lose their Bohlin (Lewin et al. 1958; Martino et al. 2007). Recov- viability once the average size of the cells falls below a ery of the maximal (or initial) cell size takes place via critical size. Cell size reduction therefore seriously auxospore formation, a process that mainly occurs after restrains the long-term stability of many diatom cultures. sexual reproduction (Chepurnov et al. 2004; Mann In order to study the bacterial influence on the size 2011). -
Wheat Seed Embryo Excision Enables the Creation Of
www.nature.com/scientificreports OPEN Wheat seed embryo excision enables the creation of axenic seedlings and Koch’s postulates Received: 27 January 2016 Accepted: 20 April 2016 testing of putative bacterial Published: 06 May 2016 endophytes Rebekah J. Robinson1, Bart A. Fraaije1, Ian M. Clark1, Robert W. Jackson2, Penny R. Hirsch1 & Tim H. Mauchline1 Early establishment of endophytes can play a role in pathogen suppression and improve seedling development. One route for establishment of endophytes in seedlings is transmission of bacteria from the parent plant to the seedling via the seed. In wheat seeds, it is not clear whether this transmission route exists, and the identities and location of bacteria within wheat seeds are unknown. We identified bacteria in the wheat (Triticum aestivum) cv. Hereward seed environment using embryo excision to determine the location of the bacterial load. Axenic wheat seedlings obtained with this method were subsequently used to screen a putative endophyte bacterial isolate library for endophytic competency. This absence of bacteria recovered from seeds indicated low bacterial abundance and/or the presence of inhibitors. Diversity of readily culturable bacteria in seeds was low with 8 genera identified, dominated by Erwinia and Paenibacillus. We propose that anatomical restrictions in wheat limit embryo associated vertical transmission, and that bacterial load is carried in the seed coat, crease tissue and endosperm. This finding facilitates the creation of axenic wheat plants to test competency of putative endophytes and also provides a platform for endophyte competition, plant growth, and gene expression studies without an indigenous bacterial background. Endophytic bacteria reside in the internal tissue of living plants without causing symptoms of disease1,2. -
Peculiar Morphology of Some Micro- Organisms Accompanying Diatomaceae Preliminary Report
J. Gen.V Appl. Microbiol. ol. 8. No. 3, 1962. PECULIAR MORPHOLOGY OF SOME MICRO- ORGANISMS ACCOMPANYING DIATOMACEAE PRELIMINARY REPORT PAVEL NEMEC and VOJTECH BYSTRICKY Chair for Technical Microbiology and Biochemistry, Slovak Technical University Laboratory for Electron Microscopy, Bratislava, Czechoslovakia Receivedfor publication,Feb. 23rd.1962 INTRODUCTION Problems connected with the study of the coexistence of diatomaceae (Bacillariophyceae, Diatomaceae) and bacteria arose at the end of the last century, when BEIJERINCK(1) introduced a method suitable for studying uni- cellular algae by bacteriological techniques, which made the cultivation and maintaining of single species of algae possible. Another problem was the cultivation of absolutely pure culture of algae free from contamination by other microorganisms such as bacteria or lower fungi. Although PRINGSx- EIM(2) maintained that the presence of bacteria does not interfere with mor- phological studies of algae, the situation is obviously more complicated in the studies of biochemical processes taking place in non-axenic cultures. Before the advent of antibiotic substances, bacteriological techniques such as diluting, spreading, etc. were used for the elimination of bacterial contamin- ation (3, 4, 5, 6). We know that some algae are capable of giving off organic compounds, mainly sugars and possibly also amino acids, into the nutrient medium (7, 8, ,9). These compounds can be metabolized by soil heterotrophs, especially bacteria ; motile species are possibly even chemotactically attracted to form more or less dense populations. Some papers suggest a possible symbiotic relation between algae and bacteria in the soil (10), others presume the exi- stence of antagonistic relations (11,12) due to antibiotics produced by either side of the microorganisms. -
Proceedings of National Seminar on Biodiversity And
BIODIVERSITY AND CONSERVATION OF COASTAL AND MARINE ECOSYSTEMS OF INDIA (2012) --------------------------------------------------------------------------------------------------------------------------------------------------------- Patrons: 1. Hindi VidyaPracharSamiti, Ghatkopar, Mumbai 2. Bombay Natural History Society (BNHS) 3. Association of Teachers in Biological Sciences (ATBS) 4. International Union for Conservation of Nature and Natural Resources (IUCN) 5. Mangroves for the Future (MFF) Advisory Committee for the Conference 1. Dr. S. M. Karmarkar, President, ATBS and Hon. Dir., C B Patel Research Institute, Mumbai 2. Dr. Sharad Chaphekar, Prof. Emeritus, Univ. of Mumbai 3. Dr. Asad Rehmani, Director, BNHS, Mumbi 4. Dr. A. M. Bhagwat, Director, C B Patel Research Centre, Mumbai 5. Dr. Naresh Chandra, Pro-V. C., University of Mumbai 6. Dr. R. S. Hande. Director, BCUD, University of Mumbai 7. Dr. Madhuri Pejaver, Dean, Faculty of Science, University of Mumbai 8. Dr. Vinay Deshmukh, Sr. Scientist, CMFRI, Mumbai 9. Dr. Vinayak Dalvie, Chairman, BoS in Zoology, University of Mumbai 10. Dr. Sasikumar Menon, Dy. Dir., Therapeutic Drug Monitoring Centre, Mumbai 11. Dr, Sanjay Deshmukh, Head, Dept. of Life Sciences, University of Mumbai 12. Dr. S. T. Ingale, Vice-Principal, R. J. College, Ghatkopar 13. Dr. Rekha Vartak, Head, Biology Cell, HBCSE, Mumbai 14. Dr. S. S. Barve, Head, Dept. of Botany, Vaze College, Mumbai 15. Dr. Satish Bhalerao, Head, Dept. of Botany, Wilson College Organizing Committee 1. Convenor- Dr. Usha Mukundan, Principal, R. J. College 2. Co-convenor- Deepak Apte, Dy. Director, BNHS 3. Organizing Secretary- Dr. Purushottam Kale, Head, Dept. of Zoology, R. J. College 4. Treasurer- Prof. Pravin Nayak 5. Members- Dr. S. T. Ingale Dr. Himanshu Dawda Dr. Mrinalini Date Dr. -
Host Cell-Free Growth of the Q Fever Bacterium Coxiella Burnetii
Host cell-free growth of the Q fever bacterium Coxiella burnetii Anders Omslanda, Diane C. Cockrella, Dale Howea, Elizabeth R. Fischerb, Kimmo Virtanevac, Daniel E. Sturdevantc, Stephen F. Porcellac, and Robert A. Heinzena,1 aCoxiella Pathogenesis Section, Laboratory of Intracellular Parasites, bElectron Microscopy Unit, and cGenomics Unit, Research Technology Section, Research Technology Branch, Rocky Mountain Laboratories, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840 Edited by Emil C. Gotschlich, The Rockefeller University, New York, NY, and approved January 22, 2009 (received for review November 26, 2008) The inability to propagate obligate intracellular pathogens under tified a potential nutritional deficiency of this medium. More- axenic (host cell-free) culture conditions imposes severe experi- over, using genomic reconstruction and metabolite typing, we mental constraints that have negatively impacted progress in defined C. burnetii as a microaerophile. These data allowed understanding pathogen virulence and disease mechanisms. Cox- development of a medium that supports axenic growth of iella burnetii, the causative agent of human Q (Query) fever, is an infectious C. burnetii under microaerobic conditions. obligate intracellular bacterial pathogen that replicates exclusively in an acidified, lysosome-like vacuole. To define conditions that Results support C. burnetii growth, we systematically evaluated the or- C. burnetii Exhibits Reduced Ribosomal Gene Expression in CCM. As an ganism’s metabolic requirements using expression microarrays, initial step to identify nutritional deficiencies of CCM that could genomic reconstruction, and metabolite typing. This led to devel- preclude C. burnetii cell division, a comparison of genome wide opment of a complex nutrient medium that supported substantial transcript profiles between organisms replicating in Vero cells growth (approximately 3 log10)ofC. -
Better Off Alone? New Insights in the Symbiotic Relationship Between the Flatworm Symsagittifera Roscoffensis and the Microalgae Tetraselmis Convolutae
Symbiosis https://doi.org/10.1007/s13199-020-00691-y Better off alone? New insights in the symbiotic relationship between the flatworm Symsagittifera roscoffensis and the microalgae Tetraselmis convolutae Thibault Androuin1,2 & Christophe Six2 & François Bordeyne2 & Florian de Bettignies2 & Fanny Noisette1 & Dominique Davoult2 Received: 2 November 2019 /Accepted: 9 June 2020 # Springer Nature B.V. 2020 Abstract The acoel flatworm Symsagittifera roscoffensis lives in obligatory symbiosis with the microalgal chlorophyte Tetraselmis convolutae. Although this interaction has been studied for more than a century, little is known on the potential reciprocal benefits of both partners, a subject that is still controversial. In order to provide new insights into this question, we have compared the photophysiology of the free-living microalgae to the symbiotic form in the flatworm, both acclimated at different light irradi- ances. Photosynthesis – Irradiance curves showed that the free-living T. convolutae had greater photosynthetic performance (i.e., oxygen production rates, ability to harvest light) than their symbiotic form, regardless of the light acclimation. However, they were affected by photoinhibition under high irradiances, which did not happen for the symbiotic form. The resistance of symbiotic microalgae to photoinhibition were corroborated by pigment analyses, which evidenced the induction of photoprotective mechanisms such as xanthophyll cycle as well as lutein and β-carotene accumulation. These processes were induced even under low light acclimation and exacerbated upon high light acclimation, suggesting a global stress situation for the symbiotic microalgae. We hypothesize that the internal conditions in the sub-epidermal zone of the flatworm (e.g., osmotic and pH), as well as the phototaxis toward high light imposed by the worm in its environment, would be major reasons for this chronic stress situation.