Insights Into Aragonite to Calcite Transformation of Arctica Islandica
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Geoducks—A Compendium
34, NUMBER 1 VOLUME JOURNAL OF SHELLFISH RESEARCH APRIL 2015 JOURNAL OF SHELLFISH RESEARCH Vol. 34, No. 1 APRIL 2015 JOURNAL OF SHELLFISH RESEARCH CONTENTS VOLUME 34, NUMBER 1 APRIL 2015 Geoducks — A compendium ...................................................................... 1 Brent Vadopalas and Jonathan P. Davis .......................................................................................... 3 Paul E. Gribben and Kevin G. Heasman Developing fisheries and aquaculture industries for Panopea zelandica in New Zealand ............................... 5 Ignacio Leyva-Valencia, Pedro Cruz-Hernandez, Sergio T. Alvarez-Castaneda,~ Delia I. Rojas-Posadas, Miguel M. Correa-Ramırez, Brent Vadopalas and Daniel B. Lluch-Cota Phylogeny and phylogeography of the geoduck Panopea (Bivalvia: Hiatellidae) ..................................... 11 J. Jesus Bautista-Romero, Sergio Scarry Gonzalez-Pel aez, Enrique Morales-Bojorquez, Jose Angel Hidalgo-de-la-Toba and Daniel Bernardo Lluch-Cota Sinusoidal function modeling applied to age validation of geoducks Panopea generosa and Panopea globosa ................. 21 Brent Vadopalas, Jonathan P. Davis and Carolyn S. Friedman Maturation, spawning, and fecundity of the farmed Pacific geoduck Panopea generosa in Puget Sound, Washington ............ 31 Bianca Arney, Wenshan Liu, Ian Forster, R. Scott McKinley and Christopher M. Pearce Temperature and food-ration optimization in the hatchery culture of juveniles of the Pacific geoduck Panopea generosa ......... 39 Alejandra Ferreira-Arrieta, Zaul Garcıa-Esquivel, Marco A. Gonzalez-G omez and Enrique Valenzuela-Espinoza Growth, survival, and feeding rates for the geoduck Panopea globosa during larval development ......................... 55 Sandra Tapia-Morales, Zaul Garcıa-Esquivel, Brent Vadopalas and Jonathan Davis Growth and burrowing rates of juvenile geoducks Panopea generosa and Panopea globosa under laboratory conditions .......... 63 Fabiola G. Arcos-Ortega, Santiago J. Sanchez Leon–Hing, Carmen Rodriguez-Jaramillo, Mario A. -
Improving the NEFSC Clam Survey for Atlantic Surfclams and Ocean Quahogs
Northeast Fisheries Science Center Reference Document 19-06 Improving the NEFSC Clam Survey for Atlantic Surfclams and Ocean Quahogs by Larry Jacobson and Daniel Hennen May 2019 Northeast Fisheries Science Center Reference Document 19-06 Improving the NEFSC Clam Survey for Atlantic Surfclams and Ocean Quahogs by Larry Jacobson and Daniel Hennen NOAA Fisheries, Northeast Fisheries Science Center, 166 Water Street, Woods Hole, MA 02543 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service Northeast Fisheries Science Center Woods Hole, Massachusetts May 2019 Northeast Fisheries Science Center Reference Documents This series is a secondary scientific seriesdesigned to assure the long-term documentation and to enable the timely transmission of research results by Center and/or non-Center researchers, where such results bear upon the research mission of the Center (see the outside back cover for the mission statement). These documents receive internal scientific review, and most receive copy editing. The National Marine Fisheries Service does not endorse any proprietary material, process, or product mentioned in these documents. If you do not have Internet access, you may obtain a paper copy of a document by contacting the senior Center author of the desired document. Refer to the title page of the document for the senior Center author’s name and mailing address. If there is no Center author, or if there is corporate (i.e., non-individualized) authorship, then contact the Center’s Woods Hole Labora- tory Library (166 Water St., Woods Hole, MA 02543-1026). Information Quality Act Compliance: In accordance with section 515 of Public Law 106-554, the Northeast Fisheries Science Center completed both technical and policy reviews for this report. -
Ageing Research Reviews Revamping the Evolutionary
Ageing Research Reviews 55 (2019) 100947 Contents lists available at ScienceDirect Ageing Research Reviews journal homepage: www.elsevier.com/locate/arr Review Revamping the evolutionary theories of aging T ⁎ Adiv A. Johnsona, , Maxim N. Shokhirevb, Boris Shoshitaishvilic a Nikon Instruments, Melville, NY, United States b Razavi Newman Integrative Genomics and Bioinformatics Core, The Salk Institute for Biological Studies, La Jolla, CA, United States c Division of Literatures, Cultures, and Languages, Stanford University, Stanford, CA, United States ARTICLE INFO ABSTRACT Keywords: Radical lifespan disparities exist in the animal kingdom. While the ocean quahog can survive for half a mil- Evolution of aging lennium, the mayfly survives for less than 48 h. The evolutionary theories of aging seek to explain whysuchstark Mutation accumulation longevity differences exist and why a deleterious process like aging evolved. The classical mutation accumu- Antagonistic pleiotropy lation, antagonistic pleiotropy, and disposable soma theories predict that increased extrinsic mortality should Disposable soma select for the evolution of shorter lifespans and vice versa. Most experimental and comparative field studies Lifespan conform to this prediction. Indeed, animals with extreme longevity (e.g., Greenland shark, bowhead whale, giant Extrinsic mortality tortoise, vestimentiferan tubeworms) typically experience minimal predation. However, data from guppies, nematodes, and computational models show that increased extrinsic mortality can sometimes lead to longer evolved lifespans. The existence of theoretically immortal animals that experience extrinsic mortality – like planarian flatworms, panther worms, and hydra – further challenges classical assumptions. Octopuses pose another puzzle by exhibiting short lifespans and an uncanny intelligence, the latter of which is often associated with longevity and reduced extrinsic mortality. -
Growth O[ Juvenile Arctica Islandica Under Experimental Conditions
HELGOL*NI)ER MEERESUNTERSUCHUNGEN Helgol~inder Meeresunters. 51, 417-431 (1997) Growth o[ juvenile Arctica islandica under experimental conditions R. Witbaard*, R. Franken & B. Visser Netherlands Institute for Sea Research, PO Box 59 1790 AB Den Burg, The Netherlands ABSTRACT: In two laboratory experiments, the effects of temperature and food availability on the growth of 10- to 23-mm high specimens of the bivalve Arctica islrmdica were estimated. Each experimental set-up consisted of 5 treatments in which either the food supply or the temperature differed. It was demonslrated that Arctica is able to grow at temperatures as low as 1 ~ A tenfold incredse of shell growth was observed at temperatures between 1~ and 12 :C. The greatest change in growth rate took place between 1~ and 6 ~ Average instantaneous shell growth varies between 0.00t)3 at I ~ to 0.0032/day at 12 ~C'. The results suggest that temperature hardly alfects the time spent in filtration, whereas particle density strongly influences that response. Starved am- reals at 9 ~ have their siphons open durmg only 12% of the time, whereas the siphons ol opti- mally fed animals were open on average during 76% of the observations. Increased siphon activity corresponded to high shell and tissue growth. At 9 ~ average shell growth at the optimum cell density o[ 20xlO" cell/1 was 3 I mm corresponding to an instantaneous rate of 0.0026/day. An algal cell density (Lsochry.sis gulbanu, Dunuliella marina) ranging between 5 and 7x10" cell/l is just enough to keep shells alive at 9 ~ (.'arbon conversion efticiency at 9 ~ is estimated to vary between 11 and 14 %. -
The Effects of Environment on Arctica Islandica Shell Formation and Architecture
Biogeosciences, 14, 1577–1591, 2017 www.biogeosciences.net/14/1577/2017/ doi:10.5194/bg-14-1577-2017 © Author(s) 2017. CC Attribution 3.0 License. The effects of environment on Arctica islandica shell formation and architecture Stefania Milano1, Gernot Nehrke2, Alan D. Wanamaker Jr.3, Irene Ballesta-Artero4,5, Thomas Brey2, and Bernd R. Schöne1 1Institute of Geosciences, University of Mainz, Joh.-J.-Becherweg 21, 55128 Mainz, Germany 2Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570 Bremerhaven, Germany 3Department of Geological and Atmospheric Sciences, Iowa State University, Ames, Iowa 50011-3212, USA 4Royal Netherlands Institute for Sea Research and Utrecht University, P.O. Box 59, 1790 AB Den Burg, Texel, the Netherlands 5Department of Animal Ecology, VU University Amsterdam, Amsterdam, the Netherlands Correspondence to: Stefania Milano ([email protected]) Received: 27 October 2016 – Discussion started: 7 December 2016 Revised: 1 March 2017 – Accepted: 4 March 2017 – Published: 27 March 2017 Abstract. Mollusks record valuable information in their hard tribution, and (2) scanning electron microscopy (SEM) was parts that reflect ambient environmental conditions. For this used to detect changes in microstructural organization. Our reason, shells can serve as excellent archives to reconstruct results indicate that A. islandica microstructure is not sen- past climate and environmental variability. However, animal sitive to changes in the food source and, likely, shell pig- physiology and biomineralization, which are often poorly un- ment are not altered by diet. However, seawater temperature derstood, can make the decoding of environmental signals had a statistically significant effect on the orientation of the a challenging task. -
Growth Response of Arctica Islandica to North Atlantic Oceanographic Conditions Since 1850
fmars-06-00483 August 2, 2019 Time: 17:16 # 1 ORIGINAL RESEARCH published: 06 August 2019 doi: 10.3389/fmars.2019.00483 Growth Response of Arctica Islandica to North Atlantic Oceanographic Conditions Since 1850 Pierre Poitevin1*, Julien Thébault1, Valentin Siebert1, Sébastien Donnet2, Philippe Archambault3, Justine Doré1, Laurent Chauvaud1 and Pascal Lazure4 1 Laboratoire des Sciences de l’Environnement Marin, Institut Universitaire Européen de la Mer, Université de Bretagne Occidentale, Plouzané, France, 2 Fisheries and Oceans Canada, Northwest Atlantic Fisheries Centre, Newfoundland, NL, Canada, 3 Département de Biologie, Québec-Océan, Université Laval, Québec, QC, Canada, 4 Ifremer, Laboratoire d’Océanographie Physique et Spatiale, Institut Universitaire Européen de la Mer, Plouzané, France The Northwest Atlantic is a key region with an essential role in global climate regulation, redistributing heat and influencing the carbon cycle. However, little is known about its evolution before 1950, mainly because of the lack of long-term instrumental measurements. The hard parts of long-lived marine biota hold the potential to extend instrumentally derived observation by several decades or centuries and enhance our understanding of global climate processes. Here, we investigate the effects of local, regional, and large-scale climate variability on the marine bivalve, Arctica islandica Edited by: (Linnaeus, 1767) from Saint-Pierre and Miquelon (SPM). This archipelago lies at the Paul E. Renaud, boundary zone between the cold Labrador Current in the north and the warm Gulf Akvaplan-niva, Norway Stream waters to the south, an excellent site to capture changes in North Atlantic Reviewed by: Nina Whitney, climate and oceanography. This study presents the northernmost, statistically robust Iowa State University, United States A. -
MOLLUSCS Species Names – for Consultation 1
MOLLUSCS species names – for consultation English name ‘Standard’ Gaelic name Gen Scientific name Notes Neologisms in italics der MOLLUSC moileasg m MOLLUSCS moileasgan SEASHELL slige mhara f SEASHELLS sligean mara SHELLFISH (singular) maorach m SHELLFISH (plural) maoraich UNIVALVE SHELLFISH aon-mhogalach m (singular) UNIVALVE SHELLFISH aon-mhogalaich (plural) BIVALVE SHELLFISH dà-mhogalach m (singular) BIVALVE SHELLFISH dà-mhogalaich (plural) LIMPET (general) bàirneach f LIMPETS bàirnich common limpet bàirneach chumanta f Patella vulgata ‘common limpet’ slit limpet bàirneach eagach f Emarginula fissura ‘notched limpet’ keyhole limpet bàirneach thollta f Diodora graeca ‘holed limpet’ china limpet bàirneach dhromanach f Patella ulyssiponensis ‘ridged limpet’ blue-rayed limpet copan Moire m Patella pellucida ‘The Virgin Mary’s cup’ tortoiseshell limpet bàirneach riabhach f Testudinalia ‘brindled limpet’ testudinalis white tortoiseshell bàirneach bhàn f Tectura virginea ‘fair limpet’ limpet TOP SHELL brùiteag f TOP SHELLS brùiteagan f painted top brùiteag dhotamain f Calliostoma ‘spinning top shell’ zizyphinum turban top brùiteag thurbain f Gibbula magus ‘turban top shell’ grey top brùiteag liath f Gibbula cineraria ‘grey top shell’ flat top brùiteag thollta f Gibbula umbilicalis ‘holed top shell’ pheasant shell slige easaig f Tricolia pullus ‘pheasant shell’ WINKLE (general) faochag f WINKLES faochagan f banded chink shell faochag chlaiseach bhannach f Lacuna vincta ‘banded grooved winkle’ common winkle faochag chumanta f Littorina littorea ‘common winkle’ rough winkle (group) faochag gharbh f Littorina spp. ‘rough winkle’ small winkle faochag bheag f Melarhaphe neritoides ‘small winkle’ flat winkle (2 species) faochag rèidh f Littorina mariae & L. ‘flat winkle’ 1 MOLLUSCS species names – for consultation littoralis mudsnail (group) seilcheag làthaich f Fam. -
Shelled Molluscs
Encyclopedia of Life Support Systems (EOLSS) Archimer http://www.ifremer.fr/docelec/ ©UNESCO-EOLSS Archive Institutionnelle de l’Ifremer Shelled Molluscs Berthou P.1, Poutiers J.M.2, Goulletquer P.1, Dao J.C.1 1 : Institut Français de Recherche pour l'Exploitation de la Mer, Plouzané, France 2 : Muséum National d’Histoire Naturelle, Paris, France Abstract: Shelled molluscs are comprised of bivalves and gastropods. They are settled mainly on the continental shelf as benthic and sedentary animals due to their heavy protective shell. They can stand a wide range of environmental conditions. They are found in the whole trophic chain and are particle feeders, herbivorous, carnivorous, and predators. Exploited mollusc species are numerous. The main groups of gastropods are the whelks, conchs, abalones, tops, and turbans; and those of bivalve species are oysters, mussels, scallops, and clams. They are mainly used for food, but also for ornamental purposes, in shellcraft industries and jewelery. Consumed species are produced by fisheries and aquaculture, the latter representing 75% of the total 11.4 millions metric tons landed worldwide in 1996. Aquaculture, which mainly concerns bivalves (oysters, scallops, and mussels) relies on the simple techniques of producing juveniles, natural spat collection, and hatchery, and the fact that many species are planktivores. Keywords: bivalves, gastropods, fisheries, aquaculture, biology, fishing gears, management To cite this chapter Berthou P., Poutiers J.M., Goulletquer P., Dao J.C., SHELLED MOLLUSCS, in FISHERIES AND AQUACULTURE, from Encyclopedia of Life Support Systems (EOLSS), Developed under the Auspices of the UNESCO, Eolss Publishers, Oxford ,UK, [http://www.eolss.net] 1 1. -
Growth Increment Periodicity in the Shell of the Razor Clam Ensis
EGU Journal Logos (RGB) Open Access Open Access Open Access Advances in Annales Nonlinear Processes Geosciences Geophysicae in Geophysics Open Access Open Access Natural Hazards Natural Hazards and Earth System and Earth System Sciences Sciences Discussions Open Access Open Access Atmospheric Atmospheric Chemistry Chemistry and Physics and Physics Discussions Open Access Open Access Atmospheric Atmospheric Measurement Measurement Techniques Techniques Discussions Open Access Biogeosciences, 10, 4741–4750, 2013 Open Access www.biogeosciences.net/10/4741/2013/ Biogeosciences doi:10.5194/bg-10-4741-2013 Biogeosciences Discussions © Author(s) 2013. CC Attribution 3.0 License. Open Access Open Access Climate Climate of the Past of the Past Discussions Growth increment periodicity in the shell of the razor clam Ensis Open Access Open Access directus using stable isotopes as a method to validateEarth age System Earth System Dynamics 1,2 1 1 1 Dynamics2,3 J. F. M. F. Cardoso , G. Nieuwland , R. Witbaard , H. W. van der Veer , and J. P. Machado Discussions 1NIOZ – Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB Den Burg Texel, the Netherlands 2CIIMAR/CIMAR – Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Rua dos Open Access Open Access Bragas 289, 4050-123 Porto, Portugal Geoscientific Geoscientific 3ICBAS – Instituto de Cienciasˆ Biomedicas´ Abel Salazar, Laboratorio de Fisiologia Aplicada,Instrumentation Universidade do Porto, Instrumentation Rua de Jorge Viterbo Ferreira 228, 4050-313 Porto, Portugal Methods and Methods and Correspondence to: J. F. M. F. Cardoso ([email protected]) Data Systems Data Systems Discussions Open Access Received: 18 February 2013 – Published in Biogeosciences Discuss.: 6 March 2013 Open Access Geoscientific Revised: 31 May 2013 – Accepted: 8 June 2013 – Published: 15 July 2013 Geoscientific Model Development Model Development Discussions Abstract. -
A Phylogenetic Backbone for Bivalvia: an RNA-Seq Approach
A phylogenetic backbone for Bivalvia: an RNA-seq approach The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation González, Vanessa L., Sónia C. S. Andrade, Rüdiger Bieler, Timothy M. Collins, Casey W. Dunn, Paula M. Mikkelsen, John D. Taylor, and Gonzalo Giribet. 2015. “A phylogenetic backbone for Bivalvia: an RNA-seq approach.” Proceedings of the Royal Society B: Biological Sciences 282 (1801): 20142332. doi:10.1098/rspb.2014.2332. http:// dx.doi.org/10.1098/rspb.2014.2332. Published Version doi:10.1098/rspb.2014.2332 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:14065405 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA A phylogenetic backbone for Bivalvia: an rspb.royalsocietypublishing.org RNA-seq approach Vanessa L. Gonza´lez1,†,So´nia C. S. Andrade1,‡,Ru¨diger Bieler2, Timothy M. Collins3, Casey W. Dunn4, Paula M. Mikkelsen5, Research John D. Taylor6 and Gonzalo Giribet1 1 Cite this article: Gonza´lez VL, Andrade SCS, Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA Bieler R, Collins TM, Dunn CW, Mikkelsen PM, 2Integrative Research Center, Field Museum of Natural History, Chicago, IL 60605, USA Taylor JD, Giribet G. 2015 A phylogenetic 3Department of Biological Sciences, Florida International University, Miami, FL 33199, USA backbone for Bivalvia: an RNA-seq approach. -
Pursuing the Quest for Better Understanding the Taxonomic Distribution of the System of Doubly Uniparental Inheritance of Mtdna
Pursuing the quest for better understanding the taxonomic distribution of the system of doubly uniparental inheritance of mtDNA Arthur Gusman1, Sophia Lecomte2, Donald T. Stewart3, Marco Passamonti4 and Sophie Breton1 1 Department of Biological Sciences, Université de Montréal, Montréal, Québec, Canada 2 Department of Biological Sciences, Université de Strasbourg, Strasbourg, France 3 Department of Biology, Acadia University, Wolfville, Nova Scotia, Canada 4 Department of Biological Geological and Environmental Sciences, University of Bologna, Bologna, Italy ABSTRACT There is only one exception to strict maternal inheritance of mitochondrial DNA (mtDNA) in the animal kingdom: a system named doubly uniparental inheritance (DUI), which is found in several bivalve species. Why and how such a radically different system of mitochondrial transmission evolved in bivalve remains obscure. Obtaining a more complete taxonomic distribution of DUI in the Bivalvia may help to better understand its origin and function. In this study we provide evidence for the presence of sex-linked heteroplasmy (thus the possible presence of DUI) in two bivalve species, i.e., the nuculanoid Yoldia hyperborea (Gould, 1841) and the veneroid Scrobicularia plana (Da Costa, 1778), increasing the number of families in which DUI has been found by two. An update on the taxonomic distribution of DUI in the Bivalvia is also presented. Subjects Biodiversity, Evolutionary Studies, Genetics, Marine Biology, Zoology Keywords Mitochondrial DNA, Doubly uniparental inheritance, Bivalvia, Mitochondrial inheritance, Yoldia hyperborea, Scrobicularia plana Submitted 4 September 2016 Accepted 5 November 2016 Published 13 December 2016 INTRODUCTION Corresponding author Sophie Breton, Strict maternal inheritance (SMI) is considered to be the paradigm for mitochondrial DNA [email protected] (mtDNA) transmission in animal species (Birky, 2001). -
Animal Size and Seawater Temperature, but Not Ph, Influence a Repeatable Startle Response Behaviour in a Wide-Ranging Marine Mollusc
Animal size and seawater temperature, but not pH, influence a repeatable startle response behaviour in a wide-ranging marine mollusc Jeff C. Clements1*, Kirti Ramesh2, Jacob Nysveen2,3, Sam Dupont2, Fredrik Jutfelt1 1 Department of Biology, Norwegian University of Science and Technology, Høgskoleringen 5, 7491 Trondheim, Norway 2 Department of Biological and Environmental Sciences, University of Gothenburg, Kristineberg Marine Research Centre, Kristineberg 566, 45178 Fiskebäckskil, Sweden 3 Havets Hus, Strandvägen 9, 45330 Lysekil, Sweden Abstract Startle response behaviours are important in predator avoidance and escape for a wide array of animals. For many marine invertebrates, however, startle response behaviours are understudied, and the effects of global change stressors on these responses are unknown. We exposed two size classes of blue mussels (Mytilus edulis × trossulus) to different combinations of temperature (15 and 19 °C) and pH (8.2 and 7.5 pHT) for three months and subsequently measured individual time to open following a tactile predator cue (i.e., startle response time) over a series of four consecutive trials. Time to open was highly repeatable on the short- term and decreased linearly across the four trials. Individuals from the larger size class had a shorter time to open than their smaller-sized counterparts. High temperature increased time to open compared to low temperature, while pH had no effect. These results suggest that bivalve time to open is repeatable, related to relative vulnerability to predation, and affected by temperature. Given that increased closure times impact feeding and respiration, the effect of temperature on closure duration may play a role in the sensitivity to ocean warming in this species and contribute to ecosystem-level effects.