Precambrian Research 249 (2014) 79–87
Contents lists available at ScienceDirect
Precambrian Research
jo urnal homepage: www.elsevier.com/locate/precamres
Three-dimensional microCT analysis of the Ediacara fossil Pteridinium
simplex sheds new light on its ecology and phylogenetic affinity
a,∗ b c c d
Mike Meyer , David Elliott , Andrew D. Wood , Nicholas F. Polys , Matthew Colbert ,
d b b e
Jessica A. Maisano , Patricia Vickers-Rich , Michael Hall , Karl H. Hoffman ,
e a
Gabi Schneider , Shuhai Xiao
a
Department of Geosciences, Virginia Tech, Blacksburg, VA 24061, USA
b
School of Geosciences, Monash University, Clayton, Victoria 3800, Australia
c
Advanced Research Computing, Virginia Tech, Blacksburg, VA 24061, USA
d
Jackson School of Geosciences, The University of Texas, Austin, TX 78712, USA
e
Geological Survey of Namibia, Windhoek, Namibia
a r t i c l e i n f o a b s t r a c t
Article history: Ediacara fossils often exhibit enigmatic taphonomy that complicates morphological characterization and
Received 12 September 2013
ecological and phylogenetic interpretation; such is the case with Pteridinium simplex from the late Edi-
Received in revised form 15 April 2014
acaran Aar Member in southern Namibia. P. simplex is often preserved as three-dimensional (3D) casts
Accepted 21 April 2014
and molds in coarse-grained quartzites, making detailed morphological characterization difficult. In addi-
Available online 2 May 2014
tion, P. simplex is often transported, distorted, and embedded in gutter fills or channel deposits, further
obscuring its morphologies. By utilizing microfocus X-ray computed tomography (microCT) techniques,
Keywords:
we are able to trace individual specimens and their vanes in order to digitally restore the 3D morphol-
Pteridinium
MicroCT ogy of this enigmatic fossil. Our analysis shows that P. simplex has a very flexible integument that can
Taphonomy be bent, folded, twisted, stretched, and torn, indicating a certain degree of elasticity. In the analyzed
Namibia specimens, we find no evidence for vane identity change or penetrative growth that were previously
Ediacaran used as evidence to support a fully endobenthic lifestyle of P. simplex; instead, evidence is consistent
Aar Member with the traditional interpretation of a semi-endobenthic or epibenthic lifestyle. This interpretation
needs to be further tested through microCT analysis of P. simplex specimens preserved in situ rather
than transported ones. The elastic integument of P. simplex is inconsistent with a phylogenetic affinity
with xenophyophore protists; instead, its physical property is consistent with the presence of colla-
gen, chitin, and cellulose, an inference that would provide constraints on the phylogenetic affinity of
P. simplex.
© 2014 Elsevier B.V. All rights reserved.
1. Introduction 2009), but understanding their phylogenetic placement has been
impeded by their unusual taphonomy (Cai et al., 2012; Gehling,
Ediacara-type fossils (580–541 Ma) represent the earliest- 1999; Laflamme et al., 2011; Schiffbauer and Laflamme, 2012) and
known complex multicellular organisms in the fossil record the lack of morphological analogs among extant taxa (Laflamme
(Laflamme et al., 2013; Narbonne, 2005; Xiao and Laflamme, et al., 2013; Seilacher et al., 2003). Among all Ediacara fossils, the
genus Pteridinium (Gürich, 1930), first described from the Nama
Group in southern Namibia (Fig. 1A), best encapsulates these
∗ two confounding factors (Fedonkin et al., 2007). Pteridinium has
Corresponding author at: Department of Geology, Bucknell University, Lewis-
a unique body plan (Fig. 1B), consisting of three vanes which are
burg, PA 17837, USA. Tel.: +1 8479515610.
E-mail addresses: [email protected], [email protected], connected along an axis known as the ‘seam’. Each vane is made
[email protected] (M. Meyer), [email protected] (D. Elliott),
of a single row (or possibly two overlapping rows) of segments
[email protected] (A.D. Wood), [email protected] (N.F. Polys), [email protected]
that are attached to the seam (Jenkins, 1992). Pteridinium can
(M. Colbert), [email protected] (J.A. Maisano), [email protected]
be preserved two-dimensionally on bedding surfaces or three-
(P. Vickers-Rich), [email protected] (M. Hall), [email protected]
(K.H. Hoffman), [email protected] (G. Schneider), [email protected] (S. Xiao). dimensionally within massive quartzite, resulting in multiple
http://dx.doi.org/10.1016/j.precamres.2014.04.013
0301-9268/© 2014 Elsevier B.V. All rights reserved.
80 M. Meyer et al. / Precambrian Research 249 (2014) 79–87
Fig. 1. Geological map, stratigraphic column, and construction of Pteridinium simplex. (A) Geological map and stratigraphic column showing the location and horizon from
which the hand sample in this study was collected (in the Aar Member, Dabis Formation, Kuibis subgroup). Radiometric dates from Schmitz (2012). (B) Morphological and
ecological reconstruction and descriptive terms of P. simplex.
taphomorphs. When preserved in 3D, Pteridinium specimens are 2. Geological and stratigraphic background
often jumbled within mass flow deposits, with their morphology
strongly modified and difficult to interpret (Elliott et al., 2011; The analyzed hand sample was collected from the Aar Mem-
Grazhdankin and Seilacher, 2002). ber of the Dabis Formation, Kuibis Subgroup, located at Aar Farm
The unusual morphology and non-actualistic (without modern in the Aus region of southern Namibia (Fig. 1A) (Hall et al., 2013;
analog) taphonomy of Pteridinium have led to various ecologi- Vickers-Rich et al., 2013). Available radiometric and chemostrati-
cal and phylogenetic interpretations. It has been interpreted as a graphic data constrain the Kuibis Subgroup to be older than
frondose epibenthic organism similar to Charniodiscus (Glaessner 547.32 ± 0.65 Ma but likely younger than 551.09 ± 1.02 Ma (Condon
and Daily, 1959), a semi-endobenthic organism similar to Erni- et al., 2005; Grotzinger et al., 1995; Narbonne et al., 2012; Schmitz,
etta (Fedonkin et al., 2007), or a fully endobenthic organism that 2012). The Aar Member consists mainly of interbedded sandstones
lived entirely within sediments (Grazhdankin and Seilacher, 2002). (1–2 m thick) and shales with a few limestone beds. It was likely
The phylogenetic affinity of Pteridinium has also been a matter deposited in an extensive, sandy, braided fluvial to shallow marine
of intense debate; it has been interpreted as a colonial organism system, partly reworked into vast inter-tidal sand flats along a low
(Pflug, 1994), a giant single-celled protist similar to modern xeno- gradient coastal plain (Elliott et al., 2011; Hall et al., 2013; Saylor
phyophores (Seilacher et al., 2003), a lichen (Retallack, 1994), or an et al., 1995). Individual sandstone beds were likely deposited during
animal (Glaessner, 1984). sheet flood events, which brought sandy sediments over mud-
Central to the current debate on the ecology and phylogenetic dominated inter-tidal to sub-tidal sediments. P. simplex fossils are
affinity of Pteridinium is a better understanding of its taphonomy found in these sandstone beds, particularly in the lower part of the
and morphology. For example, the fully endobenthic interpreta- Aar Member (Hall et al., 2013). The Aar Member is directly over-
tion rests on convoluted Pteridinium simplex specimens with their lain by bedded limestones of the Mooifontein Member, suggesting
vanes growing in sediments, penetrating each other, and switch- a major marine transgression in the area (Gresse and Germs, 1993).
ing identities (e.g., lateral vane changing to medial vane when
organism is twisted) (Grazhdankin and Seilacher, 2002). However, 3. Materials and methods
these features are difficult to resolve without a three-dimensional
understanding of the fossils, and it is thus difficult to rule out the The analyzed hand sample (V-8-2009; Fig. 2) contains multiple
possibility that some of these features may result from taphonomic P. simplex specimens. The fossils are preserved as casts or molds in
alteration. Thus, to better characterize the three-dimensional mor- massive quartzite, with their vanes probably replicated by pyrite
phology of P. simplex and to shed light on its taphonomy, ecology, but represented by stylolitic surfaces, void spaces, or secondary cal-
and phylogenetic affinity, we examined a single hand sample with cite formed during diagenesis or weathering (Meyer et al., 2014).
multiple P. simplex specimens using microfocus X-ray computed The segments in each vane are seen as parallel lines or ridges ema-
tomography (microCT). nating perpendicularly from the seam. These ridges fade away and
M. Meyer et al. / Precambrian Research 249 (2014) 79–87 81
Fig. 2. Light photographs of hand sample V-8-2009, shown in different views. Colored arrows point to correspondingly colored P. simplex specimens in Figs. 3–4. Asterisks,
triangles, and stars mark landmark locations in all views. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this
article.)
grade into a smooth surface farther away from the seam (Crimes tools available in Seg3D (CIBC, 2013), an image processing and seg-
and Fedonkin, 1996; Elliott et al., 2011; Grazhdankin and Seilacher, mentation application built on ITK (Yoo et al., 2002). The segment
2002; Jenkins, 1992). The hand sample was cut into three slabs per- masks of interest (individual specimens, vanes) were then exported
pendicular to the main axis/seam of the largest and most prominent as image stacks, resized using ImageJ to a useable 258 × 258 × 258
P. simplex specimen. The slabs are labeled 1–3 and cut lines are voxels for real-time rendering, and converted to NRRD using UNU.
marked by i–ii in Fig. 3A. Slab 1 was used for petrographic analyses Finally, the NRRD segments were composited and rendered using
(Meyer et al., 2014) while slabs 2 and 3 were used in this study. H3D (Sensegraphics, 2013); an X3D browser with strong support
Slabs 2 and 3 were cut so that they can fit in the microCT scanner. for NRRD and the volume rendering styles provided by the X3D 3.3
The two slabs were scanned separately using the ultra-high- standard (Brutzman and Daly, 2007; Consortium, 2012). Each seg-
resolution subsystem of the ACTIS scanner at the University of ment was represented as an isosurface and uniquely false-colored
Texas High-Resolution X-ray CT Facility. A FeinFocus microfocal X- for easy visualization. Using H3D, the two slabs were then scaled
ray source operating at 200 kV and 0.24 mA with no X-ray prefilter and “stitched” to restore their original pre-cut configuration. The
was employed. An empty container wedge was used. Slice thick- original microCT data, reslicings, and derivative animations are
ness corresponds to one line in a CCD image intensifier imaging available at www.digimorph.org/specimens/Pteridinium simplex.
system, with a source-to-object distance of 275 mm for slab 2 and
330 mm for slab 3, resulting in 0.096 mm and 0.115 mm interslice 4. Results
spacing, respectively. For each 1024 × 1024 pixel slice, 1400 views
◦
were acquired with three samples per view over 360 of rotation. A comparison of light photographs and corresponding microCT
The field of reconstruction was 91 mm for slab 2 and 107 mm for renderings, shown at two different perspectives, is presented in
slab 3, resulting in 0.089 mm and 0.104 mm in-plane resolution, Fig. 3. MicroCT reveals five P. simplex specimens embedded in the
respectively. scanned blocks (labeled 1–5 in Fig. 4). These specimens do not have
The scan data were processed to reduce ring and beam- a consistent orientation; for example, specimens 1 and 3 are ori-
◦
hardening artifacts, and 16 bit TIFF image stacks were reconstructed ented at 90 from each other. Four of the five specimens are partially
(1312 and 1083 slices for slabs 2 and 3, respectively). While useful exposed, with the exposed vanes marked by colored arrows match-
on their own, these image stacks did not allow for easy 3D visual- ing the color of segmented specimens in Fig. 3. Three specimens (1,
ization of the fossils within the slabs. Thus, the data were further 2 and 4) have some part of all three vanes present while the other
processed using open-source image processing, segmentation, and two specimens have at least one preserved vane (Figs. 3–5).
volume rendering tools to create 3D reconstructions of the features Specimen 1 is bent tightly and twisted slightly, but its three
of interest. Because of the large size of the original data volumes vanes are easily identifiable (colored individually in Fig. 5). It can
(2.6 and 2.2 Gb for slabs 2 and 3, respectively), the images were be seen in Fig. 5D that the blue medial vane is incompletely pre-
×
reduced to 512 512 pixels and 8 bit depth using ImageJ (Schneider served where the specimen is bent. As the fossil is bent over itself,
et al., 2012) to facilitate rendering. The resulting stack was saved the outer lateral vane is stretched (yellow vane in Fig. 5) and the
as a RAW file and then converted to NRRD format using the com- inner lateral vane is compressed (green vane in Fig. 5). Interest-
mand line utility UNU (2013) for initial rendering and import into ingly, the green lateral vane is also ruptured or torn along segment
segmentation software. boundaries (Fig. 5C and D), although the proximal part of the vane
The volumes were then segmented into individuals and vanes (the part closer to the central seam) is still intact (Fig. 5A). The
◦
using a combination of manual mask painting and semi-automated two torn pieces are oriented at ∼90 to each other; because of
82 M. Meyer et al. / Precambrian Research 249 (2014) 79–87
Fig. 3. Light photography and 3D reconstruction of Pteridinium simplex specimens within hand sample V-8-2009. (A and C) Light photographs from two different perspectives,
with (C) showing a view from the yellow arrow in (A). (B and D) MicroCT segmentations of P. simplex specimens, oriented at the same perspectives as (A) and (C), respectively,
with dashed lines representing the outline of the hand sample. Colored arrows point to specimens segmented in corresponding colors. Yellow arrows point to main specimen
(specimen 1) in this study. Numbers 1–3 denote the three slabs resulting from cuts represented by lines i and ii. Slabs 2 and 3 were microCT scanned. Asterisks mark the
same location on slab 1 near cutline i and can be used for orientation. Scale bar = 1 cm. (For interpretation of the references to color in this figure legend, the reader is referred
to the web version of this article.)
Fig. 4. Two different views of the five specimens of Pteridinium simplex. Specimens are colored and numbered. Asterisks mark the same location locations on slab 1 near
cutline i. Scale bar = 1 cm. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
M. Meyer et al. / Precambrian Research 249 (2014) 79–87 83
Fig. 5. Four different views of Pteridinium simplex specimen 1. Lateral vanes are yellow and green, and medial vane is blue. (A–C) Views including slabs 2 and 3. (D) View of
only slab 3. Asterisks and triangles mark the same two locations on slab 3 in all views. Scale bar = 1 cm. (For interpretation of the references to color in this figure legend and
the text, the reader is referred to the web version of this article.)
this, they could be easily mistaken for two different vanes, with but this specimen has the least preservational fidelity and is difficult
the dangling piece in Fig. 5C and D misidentified as a medial vane, to reconstruct. Despite the interactions among the five speci-
particularly when the real medial vane (blue color in Fig. 5B and mens in the analyzed sample, there is no evidence for penetrative
5D) is not well preserved. Thus, taphonomic alteration could lead growth.
to false interpretation of vane identity change.
Specimen 3 abuts against specimen 1, with their exposed vanes 5. Taphonomic and ecological interpretations
oriented at a right angle (Figs. 3A and C, 4A and 6A), giving an
impression of possible penetrative growth. However, rock mate- Our microCT analysis confirms the basic morphological archi-
rial at the exposed contact between the two specimens has been tecture of P. simplex, with three vanes attached to a single central
removed by weathering, making it impossible to determine the seam. The nature of vane preservation as void space or secondary
exact nature of the contact based on visual examination of the hand calcite, however, does not allow us to resolve whether each vane
sample. MicroCT allows a closer look at the nature of the contact is composed of a single row or two overlapping rows of segments
inside the hand sample, and the slice images show that (1) the vanes (Jenkins, 1992). Nonetheless, the microCT data do reveal several
of these two specimens do not crosscut each other, and (2) a vane of important aspects of P. simplex morphology, taphonomy, and pale-
specimen 3 is bent slightly at the distal edge when it comes in close oecology.
contact with one of the lateral vanes of specimen 1 (Fig. 6). The lat- First, the folding, bending, and twisting of P. simplex speci-
ter relationship is best seen in unexposed vanes where the effect mens, as well as the stretching, warping, and breakage of P. simplex
of weathering is minimal (e.g., compare the exposed and unex- vanes, are interpreted as taphonomic in origin. Such taphonomic
posed parts of the same vane marked by green arrows in Fig. 6B alteration is expected given the sedimentological inference that
and 6C, respectively). Thus, we have found no evidence for pene- these specimens were entrained and transported in mass flow
trative growth, even though the jumbled specimens seem to give deposits (Elliott et al., 2011). Entrainment in high-density mass
the impression of a penetrative relationship. flow deposits also better explains the lack of preferred orientation
The other three specimens also interact with specimen 1. One among tightly packed specimens. Indeed, different parts of a single
lateral vane of specimen 2 is also in contact with the distal ends of specimen can assume different orientations; for example, the bend-
the two lateral vanes of specimen 1 (Figs. 3D and 4B). Again, there is ing and twisting of specimen 1 resulted in different orientations of
no evidence for penetrative growth. Specimen 4 can be clearly seen the two ends of this fossil (Figs. 5C, D and 7).
as a curved space on the surface of the hand sample (Fig. 2B). How- Second, although P. simplex vanes are stretchable, they can
ever, only a small part of this specimen is preserved and one of its be torn, apparently along segment boundaries which may
vanes is in contact with the seam of specimen 1 (Fig. 4B). Specimen represent mechanical weakness. That the distal part of the vane
5 sits against one of the lateral vanes of specimen 1 (Figs. 3D and 4B), is torn whereas the proximal part is intact suggests that the former
84 M. Meyer et al. / Precambrian Research 249 (2014) 79–87
Fig. 6. Three-dimensional reconstruction and microCT slice images of Pteridinium simplex specimens 1 (yellow) and 3 (green). (A) View showing that the vanes of the two
specimens abruptly abut against each other. (B–C) MicroCT slice images, showing the relationship between the two specimens. Colored arrows point to vanes of specimens
segmented in corresponding colors. Note that the apparent vane termination of specimen 3 at specimen 1 is due to weathering on exposed surface (green arrows and green
dashed line in B) and that, when unexposed, the same vane is distally bent where it is compressed against specimen 1 (yellow arrows and yellow dashed line in C). Scale
bar = 1 cm. (For interpretation of the references to color in this figure legend and the text, the reader is referred to the web version of this article.)
may have been mechanically weaker than the latter. This inference of P. simplex (Fig. 1B) with its central seam buried in the sedi-
is consistent with previous interpretations that the seam of P. sim- ments but the distal part of the vanes remaining free in the water
plex seems to be the most rigid part of the organism, with the vanes column (Elliott et al., 2011; Meyer et al., 2014). The epibenthic
and segments quickly losing definition farther away from the seam or semi-endobenthic ecological interpretations can also account
and grading into a smooth surface (Elliott et al., 2011; Grazhdankin for Pteridinium specimens that are preserved more or less two-
and Seilacher, 2002; Jenkins, 1992). The taphonomic reorientation dimensionally on the bedding surface (Narbonne et al., 1997).
of broken vanes would also make it difficult to determine vane
identity, particularly when the medial vane is poorly preserved (as
commonly is the case), and when three-dimensional morphologi- 6. Discussion on biomaterial composition and phylogenetic
cal reconstructions are not available and thus the determination of affinity
vane identity has to be based on vane orientation.
Third, detailed microCT imaging of the interrelationship A major taphonomic problem for many Ediacara fossils (includ-
between tightly packed P. simplex specimens with sharply abutting ing P. simplex) is that, although they are ‘soft-bodied’, their
vanes shows no evidence for penetrative growth; instead, the distal integument seems to be rigid enough to survive transport, but also
edges of vanes are bent when compressed against other vanes. Pre- pliable enough to account for bent and twisted specimens (Dzik,
vious interpretation of penetrative growth in P. simplex was based 1999, 2003; Fedonkin et al., 2007; Gehling, 1999). The absence of
on hand sample observation of specimens with vanes abruptly preserved organic material in many Ediacara fossils, particularly
abutting against each other (Grazhdankin and Seilacher, 2002). those hosted in sandstones, has led some investigators to pur-
Such a relationship can be alternatively interpreted as taphonom- sue biomechanical studies using flume or flow tank experiments,
ically broken vanes jammed against other specimens. A positive in order to infer the biomechanical properties of their original
identification of penetrative growth requires microCT data to con- integument (Schopf and Baumiller, 1998; Singer et al., 2012). While
firm that vanes crosscut each other rather than just abut against this study was not set up to examine the biomechanics of P. sim-
each other. plex, biomechanical information can be indirectly inferred from the
Thus, some of the evidence previously used to infer a fully three-dimensional scan data. The degree of stiffness and elastic-
endobenthic lifestyle of P. simplex—convoluted specimens with ity exhibited by the vanes of P. simplex may help to constrain the
penetrative growth and vane identity change (Grazhdankin and biomechanical properties and possible biomaterial makeup of its
Seilacher, 2002)—needs to be reconsidered in light of the new integument. This information can then be used to indirectly infer
data presented here. Because the analyzed specimens have been the possible phylogenetic affinity of P. simplex. However, in order
transported, it is important to carry out microCT analysis of spec- to constrain the biomaterial makeup of P. simplex integument, we
imens preserved in life position to further test the endobenthic must first understand what stiff yet elastic biomaterials are present
hypothesis. Nonetheless, our data are consistent with an epiben- in extant (and extinct) organisms and how they may have affected
thic model, and they do not falsify a semi-endobenthic life mode the taphonomic behavior of P. simplex vanes.
M. Meyer et al. / Precambrian Research 249 (2014) 79–87 85
muscles, and unbound, as in mesoglea) are structurally elastic,
meaning that it can be stretched or compressed and still return to
its original form. Other potentially elastic biomaterials in extant
organisms are mostly structural polysaccharides, including chitin
and cellulose. Chitin is a nitrogen bearing polysaccharide that has
variable biomechanical properties depending on the inclusion
of additional materials such as sclerotin or calcium carbonate
(Bengtson and Conway Morris, 1992; Varki, 2009). Various forms
of chitin are present in the cell walls of fungal hyphae, the pro-
teinaceous matrix of arthropods (with high levels of sclerotin), and
the exoskeletons of crustaceans and calcified shells of molluscs
(Marin and Luquet, 2005; Schönitzer et al., 2011). Cellulose is the
main structural component in the cell walls of algae and plants
(Vogel, 2003), but it is also present in the tunic of tunicate animals
(Endean, 1961; Vogel, 2003). Cellulose fibers are highly flexible, as
can be observed in some algal fronds (Koehl, 1999; Martone, 2007;
Martone and Denny, 2008), but highly packed cellulose fibers can
be brittle due to the crystalline nature of cellulose (Vogel, 2003).
Pectin and pellicle are present in the cell walls of some eukary-
otes (Kirby, 1941). Pectins are complex polysaccharides in the
primary cell walls of non-woody terrestrial plants and bind the cells
together (Braconnot, 1825; Buchanan et al., 2000). Pellicle is a thin
layer of proteinaceous strips supporting the cell membrane in vari-
ous protozoa (Kirby, 1941). Both pectin and pellicle can be flexible,
elastic, or rigid, but these variable biomechanical characteristics are
only expressed on small scales (Kirby, 1941). Additionally, bacte-
rial cell walls have a mesh-like layer of peptidoglycan (murein) that
serves a structural role (increasing the strength of the cell wall) and
controls osmotic pressures (Demchick and Koch, 1996; van den Ent
et al., 2001). However, because we do not have any biomechanical
information of P. simplex at the cellular scale, the presence/absence
of pectin, pellicle, or peptidoglycan in P. simplex integument cannot
be tested using the currently available data.
Finally, some living organisms form an agglutinated test as their
“integument”. For example, some single-celled foraminifers are
well known for their agglutinated tests (Murray, 2006). Aggluti-
Fig. 7. Simplified diagram showing bending, twisting, and tearing in specimen 1
nated walls consist of sediment particles, sometimes bound with
(vane colors correspond to those in Fig. 5). (A) Pre-deformation morphology. (B–C)
organic material (Murray, 2006). Xenophyophoran foraminifers
Bending. (D) Twisting and tearing along segment boundaries. (For interpretation of
the references to color in this figure legend, the reader is referred to the web version can form agglutinated tests of macroscopic size, consisting of fine
of this article.)
sediment bound with fecal pellets (Murray, 2006; Seilacher et al.,
2003; Tendal, 1972, 1979). Structurally, however, their tests are
6.1. Extinct biomaterials very brittle and do not deform easily (Seilacher et al., 2003; Tendal,
1972).
Ediacara fossils were once placed in the extinct clade Vendo-
bionta and were noted for their distinct morphology, preservation, 6.3. Taphonomic constraint on phylogenetic affinity
and biocoenosis (Grazhdankin and Seilacher, 2002; Seilacher, 1989,
1992, 2007). The placement of P. simplex within the Vendobionta Any phylogenetic interpretations for P. simplex must also con-
opens up the possibility that its integument may have been com- sider its taphonomy. Since Pteridinium fossils are preserved as casts
posed of a distinct biomaterial that has since been lost along with or molds in massive quartzite, there is no original organic material
the extinction of Ediacara organisms. While we cannot exclude this or any carbonaceous material associated with the fossils. Preser-
possibility, it is very difficult to constrain, without the aid of mod- vation in coarse-grained siliciclastic rocks is common for Ediacara
ern analogs, the range of materials that accord with the inferred fossils (Gehling, 1999; Schiffbauer and Laflamme, 2012), with few
biomechanical properties of P. simplex integument. Even though of them being preserved through carbonaceous compression, the
the vendobionts may represent an extinct clade, they must be evo- main taphonomic mode of Burgess Shale-type fossils. One of the
lutionarily related to extant organisms. Thus, our search for the exceptions is the Ediacara fossil Eoandromeda, which is preserved
possible biomaterial makeup of P. simplex integument is necessarily both as casts/molds in sandstone and as carbonaceous compres-
based on extant analogs. sions in black shale (Zhu et al., 2008; Xiao et al., 2013). It is thus
inferred that P. simplex must have had an organic integument and
6.2. Extant biomaterials the lack of carbonaceous preservation is due to secondary loss.
Indeed, many Phanerozoic plant fossils, when preserved in coarse-
Collagen is exclusively found in animals and is most commonly grained sandstones, lack carbonaceous material as well (Driese
present in their integuments, muscles, and connective tissues et al., 1997; Sharon, 2010).
(Müller, 2003; Vogel, 2003). It is also present (in a more loosely The minor clay minerals found in association with P. simplex
packed form) in the mesoglea of diploblastic animals such as vanes (Meyer et al., 2014) may be important, because detrital and
cnidarians and ctenophores (Hernandez-Nicaise and Amsellem, authigenic clay minerals are thought to play a constructive role in
1982; Tucker et al., 2011). Collagen fibers (both bound, as in the preservation of soft tissues (Anderson et al., 2011; Butterfield,
86 M. Meyer et al. / Precambrian Research 249 (2014) 79–87
1990; Cai et al., 2012; Laflamme et al., 2011; Meyer et al., 2012; Orr 7. Conclusions
et al., 1998). Clay minerals have been known from Burgess Shale-
type biotas where carbonaceous material is preserved (Butterfield, MicroCT offers an effective approach to study P. simplex spec-
1990; Gaines et al., 2008; Orr et al., 1998; Xiao et al., 2002). Although imens preserved three-dimensionally within mass flow deposits.
detrital or authigenic clays may have played a constructive role in Our investigation confirms the basic morphology of P. simplex:
the preservation of Ediacaran fossils such as Aspidella (Laflamme three vanes attached at the seam. The vanes can be bent, folded,
et al., 2011), Conotubus (Cai et al., 2012), and Shaanxilithes (Meyer twisted, stretched, and torn, through taphonomic processes. Such
et al., 2012), the origin of clays in association with P. simplex vanes taphonomic alterations complicate morphological reconstruction
cannot yet be resolved with available data and they have been ten- of P. simplex, and can potentially lead to false interpretation of vane
tatively interpreted as weathering products (Meyer et al., 2014). identity change and penetrative growth, particularly when obser-
With the lack of carbonaceous material and the problematic origin vation is limited to the external surface of fossiliferous blocks. Our
of minor clay minerals in association with P. simplex (Meyer et al., microCT analysis reveals no evidence for vane identity change or
2014), our phylogenetic interpretation has to be indirectly based penetrative growth. Thus, this important basis for postulating an
on the integument biomaterials, which are in turn inferred from entirely endobenthic P. simplex should be treated with caution and
the taphonomic behavior and the elastic biomechanical property should be further tested with microCT analysis of specimens pre-
of the integument. served in life position. Nonetheless, the data presented here are
consistent with the traditional ecological interpretation of P. sim-
6.4. Phylogenetic discussion
plex as a semi-endobenthic or epibenthic organism because this life
style also accounts for specimens preserved two dimensionally on
Collagen, cellulose, and chitin have been the most commonly
bedding surfaces. The taphonomic deformation of P. simplex indi-
hypothesized biomaterials for P. simplex integument (Buss and
cates that it had an elastic integument, which is inconsistent with
Seilacher, 1994; Dzik, 1999; Elliott et al., 2011; Retallack, 1994,
a phylogenetic affinity with xenophyophores. Its integument may
2007; Seilacher, 1992), although agglutinated tests similar to extant
have been made of a collagenous, chitinous, and cellulose bioma-
xenophyophores have also been suggested as possible construc-
terial. Because collagen synthesis is a synapomorphy of the animal
tional biomaterials (Seilacher et al., 2003). The elastic behavior of
kingdom, P. simplex may be phylogenetically related to animals,
P. simplex vanes is consistent with the presence of collagen or chitin
likely representing a stem-group animal considering its unique
in its integument. Both of these materials can add to the elasticity
body plan.
and flexibility of the integument. However, the sharply torn edge
of P. simplex vanes also suggests a stiffness or rigidity that could be
Acknowledgments
attributed to the presence of cellulose fibers within the integument.
Agglutinated tests, however, can be excluded as they do not have
Financial support for this study was provided by the
the degree of flexibility as observed in the taphonomic analysis of
U.S. National Science Foundation (EAR-0844235, EAR-0948842,
P. simplex. Thus, a phylogenetic affinity with xenophyophores can
EAR-1124062, EAR-1250800), International Geosciences Program
also be excluded. As stated above, the presence/absence of pectin,
Projects 493 and 587, and National Geographic Society, and both
pellicle, or peptidoglycan in P. simplex integument cannot be tested
the international and national committees of the International Geo-
because of the lack of cellular scale behavior of P. simplex integu-
science Programme (IGCP). We would like to thank the anonymous
ment.
reviewers for constructive comments and the owners of Farm Aar,
The possible presence of collagen, cellulose, and chitin in the
B. Boehm-Erni and the late B. Boehm, for granting access to the
integument of P. simplex can be used to constrain the phylogenetic
fossils site and their hospitality.
affinity of this enigmatic Ediacara fossil. Collagen is found exclu-
sively in animals. Extant animals use collagen in a diverse array of
functions (e.g., collagen in muscles and connective tissues can assist Appendix A. Supplementary data
locomotion), but these functions may have been derived character-
istics that evolved after the origin of collagen. With a few exceptions Supplementary data associated with this article can be found,
(Ivanstov, 2009, 2011; Ivanstov and Malakhovskaya, 2002), most in the online version, at http://dx.doi.org/10.1016/j.precamres.
Ediacara fossils including P. simplex were probably immobile orga- 2014.04.013.
nisms. Thus, the presence of collagen P. simplex integument may
not be related to mobility. Chitin and cellulose have broader phylo- References
genetic distribution than collagen, but both are present in modern
animals (e.g., chitin in arthropods and cellulose in tunicates). Thus, Anderson, E., Schiffbauer, J.D., Xiao, S., 2011. Taphonomic study of organic-walled
microfossils confirms the importance of clay minerals and pyrite in Burgess
the presence of chitin and cellulose in P. simplex does not discrim-
Shale-type preservation. Geology 39, 643–646.
inate against a phylogenetic relationship with animals.
Bengtson, S., Conway Morris, S., 1992. Early radiation of biomineralizing phyla. In:
If collagen was indeed present in P. simplex integument, then Lipps, J.H., Signor, P.W. (Eds.), Origin and Early Evolution of the Metazoa. Plenum,
New York, United States, pp. 447–481.
this enigmatic Ediacara fossil may be more closely related to
Braconnot, H., 1825. Recherches sur un nouvel acide universellement répandu dans
living animals than any other living clades because collagen is
tous les vegetaux. Ann. Chim. Phys. 28, 173–178.
exclusively present in the animal kingdom. On the other hand, Brutzman, D., Daly, L., 2007. X3D: Extensible 3D Graphics for Web Authors. Morgan
because P. simplex does not seem to share its body plan with Kaufmann Publishers Inc., San Francisco, CA.
Buchanan, B.B., Gruissem, W., Jones, R.L., 2000. Biochemistry and Molecular Biology
any other living animals, we surmise that it is likely a stem-
of Plants. American Society of Plant Biologists, Rockville, MD, USA.
group animal. Because the animal kingdom and its living sister
Buss, L.W., Seilacher, A., 1994. The Phylum vendobionta: a sister group of the
group—the choanoflagellates—are separated by significant mor- Eumetazoa? Paleobiology 20, 1–4.
Butterfield, N.J., 1990. Organic preservation of non-mineralizing organisms and the
phological gaps, it is expected that stem-group animals share one
taphonomy of the Burgess Shale. Paleobiology 16, 272–286.
or a few features (collagen in the case of P. simplex) collectively
Cai, Y., Schiffbauer, J.D., Hua, H., Xiao, S., 2012. Preservational modes in the Ediacaran
defining the living animal clade, and it is also expected that these Gaojiashan Lagerstätte: pyritization, aluminosilicification, and carbonaceous
compression. Palaeogeogr. Palaeoclimatol. Palaeoecol. 326–328, 109–117.
extinct stem-group animals may have evolved their own autapo-
CIBC, 2013. Volumetric image segmentation and visualization. In: University of Utah
morphies (three-vaned body architecture in the case of P. simplex)
Scientific Computing and Imaging Institute (Ed.), Seg3D. University of Utah Sci-
that make them drastically different from crown-group animals. entific Computing and Imaging Institute.
M. Meyer et al. / Precambrian Research 249 (2014) 79–87 87
Condon, D., Zhu, M., Bowring, S., Wang, W., Yang, A., Jin, Y., 2005. U-Pb ages from Meyer, M., Schiffbauer, J.D., Xiao, S., Cai, Y., Hua, H., 2012. Taphonomy of the upper
the Neoproterozoic Doushantuo Formation, China. Science 308, 95–98. Ediacaran enigmatic ribbonlike fossil Shaanxilithes. Palaios 27, 354–372.
Consortium, W.D., 2012. Extensible 3D (X3D) specifications: ISO/IEC 19775-1 Müller, W.E.G., 2003. The origin of metazoan complexity: porifera as integrated
(Abstract Spec), ISO/IEC 19775-2 (SAI), ISO/IEC 19776-1 (XML Encoding), ISO/IEC animals. Integr. Comp. Biol. 43, 3–10.
19776-2 (utf-8 Encoding, ISO/IEC), 19776-3 (Binary Encoding). X3D Spec. Murray, J.W., 2006. Ecology and Applications of Benthic Foraminifera. Cambridge
Crimes, T.P., Fedonkin, M.A., 1996. Biotic changes in platform communities across University Press, New York.
the Precambrian–Phanerozoic boundary. Riv. Ital. Paleontol. Strat. 102, 317–332. Narbonne, G.M., 2005. The Ediacara biota: neoproterozoic origin of animals and their
Demchick, P., Koch, A.L., 1996. The permeability of the wall fabric of Escherichia coli ecosystems. Annu. Rev. Earth Planet Sci. 33, 421–442.
and Bacillus subtilis. J. Bacteriol. 178, 768–773. Narbonne, G.M., Saylor, B.Z., Grotzinger, J.P., 1997. The youngest Ediacaran fossils
Driese, S., Mora, C., Elick, J., 1997. Morphology and taphonomy of root and stump from southern Africa. J. Paleontol. 71, 953–967.
casts of the earliest trees (Middle to Late Devonian), Pennsylvania and New York, Narbonne, G.M., Xiao, S., Shields, G.A., 2012. The Ediacaran period. In: Gradstein,
U.S.A. Palaios 12, 524–537. F.M., Ogg, J.G., Schmitz, M.D., Ogg, G. (Eds.), Geological Time Scale 2012. Elsevier,
Dzik, J., 1999. Organic membranous skeleton of the Precambrian metazoans from Oxford, pp. 413–435.
Namibia. Geology 27, 519–522. Orr, P.J., Briggs, D.E.G., Kearns, S.L., 1998. Cambrian Burgess Shale animals replicated
Dzik, J., 2003. Anatomical information content in the Ediacaran fossils and their in clay minerals. Science 281, 1173–1180.
possible zoological affinities. Integr. Comp. Biol. 43, 114–126. Pflug, H.D., 1994. Role of size increase in Precambrian organismic evolution. Neues
Elliott, D.A., Vickers-Rich, P., Trusler, P., Hall, M., 2011. New evidence on the Jahrb. Geol. Palaeontol. Abhandlungen 193, 245–286.
taphonomic context of the Ediacaran Pteridinium. Acta Palaeontol. Pol. 56, Retallack, G.J., 1994. Were the Ediacaran fossils lichens? Paleobiology 20, 523–544.
641–650. Retallack, G.J., 2007. Growth, decay and burial compaction of Dickinsonia, an iconic
Endean, R., 1961. The test of the ascidian, Phallusia mammillata. Q. J. Microsc. Sci. Ediacaran fossil. Alcheringa 31, 215–240.
102, 107–117. Saylor, B.Z., Kaufman, A.J., Grotzinger, J.P., Urban, F., 1995. Sequence stratigraphy
Fedonkin, M.A., Gehling, J.G., Grey, K., Narbonne, G.M., Vickers-Rich, P., 2007. The and sedimentology of the Neoproterozoic Kuibis and Schwarzrand Subgroups
Rise of Animals: Evolution and Diversification of the Kingdom Animalia. Johns (Nama Group), southwestern Namibia. Precamb. Res. 73, 153–171.
Hopkins University Press, Baltimore. Schiffbauer, J.D., Laflamme, M., 2012. Lagerstätten through time. A collection of
Gaines, R.R., Briggs, D.E.G., Zhao, Y.L., 2008. Cambrian Burgess Shale-type deposits exceptional preservational pathways from the terminal Neoproterozoic through
share a common mode of fossilization. Geology 36, 755–758. today. Palaios 27, 275–278.
Gehling, J.G., 1999. Microbial mats in terminal Proterozoic siliciclastics: Ediacaran Schmitz, M.D., 2012. Appendix 2—Radiometric ages used in GTS2012. In: Grad-
death masks. Palaios 14, 40–57. stein, F.M., Ogg, J.G., Schmitz, M.D., Ogg, G. (Eds.), The Geologic Time Scale 2012.
Glaessner, M.F., 1984. The Dawn of Animal Life: A Biohistorical Study. Cambridge Elsevier, Boston, pp. 1045–1050.
Univ. Press, Cambridge, UK. Schneider, C.A., Rasband, W.S., Eliceiri, K.W., 2012. NIH Image to ImageJ: 25 years of
Glaessner, M.F., Daily, B., 1959. The geology and Late Precambrian fauna of the image analysis. Nat. Methods 9, 671–675.
Ediacaran fossil reserve. Rec. S. Aust. Mus. 13, 369–401. Schönitzer, V., Eichner, N., Clausen-Schaumann, H., Weiss, I.M., 2011. Transmem-
Grazhdankin, D., Seilacher, A., 2002. Underground Vendobionta from Namibia. brane myosin chitin synthase involved in mollusc shell formation produced in
Palaeontology 45, 57–78. Dictyostelium is active. Biochem. Biophys. Res. Commun. 415, 586–590.
Gresse, P.G., Germs, G.J.B., 1993. The Nama foreland basin: sedimentation, major Schopf, K.M., Baumiller, T.K., 1998. A biomechanical approach to Ediacaran hypothe-
unconformity bounded sequences and multisided active margin advance. Pre- ses: how to weed the Garden of Ediacara. Lethaia 31, 89–97.
camb. Res. 63, 247–272. Seilacher, A., 1989. Vendozoa: organismic construction in the Precambrian bio-
Grotzinger, J.P., Bowring, S.A., Saylor, B.Z., Kaufman, A.J., 1995. Biostratigraphic sphere. Lethaia 22, 229–239.
and geochronologic constraints on early animal evolution. Science 270, Seilache, A., 1992. Vendobionta and Psammocorallia: lost constructions of Precam-
598–604. brian evolution. J. Geol. Soc. (Lond.) 149, 607–613.
Gürich, G., 1930. Die bislang ältesten Spuren von Organismen in Südafrika. Int. Geol. Seilacher, A., 2007. The nature of vendobionts. In: Vickers-Rich, P., Komarower, P.
Congr. S. Afr. XV (2), 670–680. (Eds.), The Rise and Fall of the Ediacaran Biota. Geological Society of London
Hall, M., Kaufman, A.J., Vickers-Rich, P., Ivanstov, A.Y., Trusler, P., Linnemann, U., Special Publications, 286, pp. 387–397.
Hofmann, M., Elliott, D.A., Cui, H., Fedonkin, M.A., HoffmanF K., Wilson, S.A., Seilacher, A., Grazhdankin, D., Legouta, A., 2003. Ediacaran biota: the dawn of animal
Schneider, G., Smith, J., 2013. Stratigraphy, palaeontology and geochemistry of life in the shadow of giant protists. Paleontol. Res. 7, 43–54.
the late Neoproterozoic Aar Member, southwest Namibia: reflecting environ- Sensegraphics, 2013. Open source haptics – H3D.org. In: Sensegraphics. H3D.
mental controls on Ediacara fossil preservation during the terminal Proterozoic Sharon, M., 2010. A survey of fossils and geology of Red Rock Canyon Open Space,
in African Gondwana. Precamb. Res. 238, 214–232. Colorado Springs, Colorado. Mt. Geol. 47, 1–14.
Hernandez-Nicaise, M.L., Amsellem, J., 1982. Ultrastructure of the giant smooth Singer, A., Plotnick, R.E., Laflamme, M., 2012. Experimental fluid mechanics of an
muscle fiber of the ctenophore Beroe ovata. J. Ultrastruct. Res. 72, Ediacaran frond. Palaeontol. Electron. 15, 1–14.
151–168. Tendal, O.S., 1972. A monograph of the Xenophyophoria (Rhizopodea, Protozoa).
Ivanstov, A.Y., 2009. New reconstruction of Kimberella, problematic Vendian meta- Galathea Rep. 12, 7–99.
zoan. Paleontol. J. 43, 601–611. Tendal, O.S., 1979. Aspects of the biology of Komokiacea and Xenophyophoria. Sarsia
Ivanstov, A.Y., 2011. Feeding traces of proarticulata—the Vendian metazoa. Paleon- 64, 13–17.
tol. J. 45, 237–248. Tucker, R.P., Shibata, B., Blankenship, T.N., 2011. Ultrastructure of the mesoglea of the
Ivanstov, A.Y., Malakhovskaya, Y.E., 2002. Giant traces of Vendian animals. Doklady sea anemone Nematostella vectensis (Edwardsiidae). Invertebr. Biol. 130, 11–24.
Akademii Nauk 385, 382–386. UNU, 2013. Teem Tools to Process and Visualize Scientific Data and Images. UNU.
Jenkins, R.J.F., 1992. Functional and ecological aspects of Ediacaran assemblages. In: van den Ent, F., Amos, L., Lowe, J., 2001. Prokaryotic origin of the actin cytoskeleton.
Lipps, J.H., Signor, P.W. (Eds.), Origin and Early Evolution of Metazoa. Plenum Nature 413, 39–44.
Press, New York, pp. 131–176. Varki, A., 2009. Essentials of Glycobiology, 2nd ed. Cold Spring Harbor Laboratory
Kirby, H., 1941. Organisms living on and in protozoa. In: Calkins, G., Summers, F. Press, Cold Spring Harbor, NY, USA.
(Eds.), Protozoa in Biological Research. Columbia University Press, Morningside Vickers-Rich, P., Ivanov, A.V., Trusler, P., Narbonne, G.M., Hall, M., Wilson, S.I.,
Heights, New York, pp. 1009–1010. Greentree, C., Fedonkin, M.A., Elliott, D.A., Hoffmann, K.H., Schneider, G.I.C.,
Koehl, M.A.R., 1999. Ecological biomechanics of benthic organisms: life history, 2013. Reconstructing Rangea: new discoveries from the Ediacaran of southern
mechanical design and temporal patterns of mechanical stress. J. Exp. Biol. 202, Namibia. J. Paleontol. 87, 1–15.
3469–3470. Vogel, S., 2003. Comparative Biomechanics: Lifes Physical World. Princetion Univer-
Laflamme, M., Darroch, S.A.F., Tweedt, S.M., Peterson, K.J., Erwin, D., 2013. The end of sity Press, New Jersey, USA.
the Ediacara biota: extinction, biotic replacement, or Cheshire Cat? Gondwana Xiao, S., Laflamme, M., 2009. On the eve of animal radiation: phylogeny, ecology and
Res. 23, 558–573. evolution of the Ediacara biota. Trends Ecol. Evol. 24, 31–40.
Laflamme, M., Schiffbauer, J.D., Narbonne, G.M., Briggs, D.G., 2011. Microbial biofilms Xiao, S., Yuan, X., Steiner, M., Knoll, A.H., 2002. Macroscopic carbonaceous compres-
and the preservation of the Ediacara biota. Lethaia 44, 203–213. sions in a terminal Proterozoic shale: a systematic reassessment of the Miaohe
Marin, F., Luquet, G., 2005. Molluscan biomineralization: the proteinaceous shell biota, South China. J. Paleontol. 76, 347–376.
constituents of Pinna nobilis L. Mater. Sci. Eng. C 25, 105–111. Xiao, S., Droser, M., Gehling, J.G., Hughes, I.V., Wan, B., Chen, Z., Yuan, X., 2013.
Martone, P.T., 2007. Kelp versus Coralline: cellular basis for mechanical strength in Affirming life aquatic for the Ediacara biota in China and Australia. Geology 41,
the wave-swept seaweed calliarthron (Corallinaceae, Rhodophyta). J. Phycol. 43, 1095–1098.
882–891. Yoo, T.S., Ackerman, M.J., Lorensen, W.E., Schroeder, W., Chalana, V., Aylward, S.,
Martone, P.T., Denny, M.W., 2008. To bend a coralline: effect of joint morphology Metaxas, D., Whitaker, R., 2002. Engineering and algorithm design for an image
on flexibility and stress amplification in an articulated calcified seaweed. J. Exp. processing API: a technical report on ITK – The Insight Toolkit. In: Westwood, J.
Biol. 211, 3421–3430. (Ed.), Proceedings of Medicine Meets Virtual Reality. IOS Press, Amsterdam, pp.
Meyer, M., Elliott, D.A., Schiffbauer, J.D., Vickers-Rich, P., Xiao, S., Hoffmann, K.H., 586–592.
Hall, M., Schiender, G., 2014. Taphonomy of the Ediacaran fossil Pteridinium sim- Zhu, M., Gehling, J.G., Xiao, S., Zhao, Y.-L., Droser, M., 2008. Eight-armed Ediacara
plex preserved three-dimensionally in mass flow deposits in the Nama group of fossil preserved in contrasting taphonomic windows from China and Australia.
Namibia. J. Paleontol. 88, 240–252. Geology 36, 867–870.