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Ancient Mitogenomes Shed Light on the Evolutionary History And
Ancient Mitogenomes Shed Light on the Evolutionary History and Biogeography of Sloths Frédéric Delsuc, Melanie Kuch, Gillian Gibb, Emil Karpinski, Dirk Hackenberger, Paul Szpak, Jorge Martinez, Jim Mead, H. Gregory Mcdonald, Ross Macphee, et al. To cite this version: Frédéric Delsuc, Melanie Kuch, Gillian Gibb, Emil Karpinski, Dirk Hackenberger, et al.. Ancient Mitogenomes Shed Light on the Evolutionary History and Biogeography of Sloths. Current Biology - CB, Elsevier, 2019. hal-02326384 HAL Id: hal-02326384 https://hal.archives-ouvertes.fr/hal-02326384 Submitted on 22 Oct 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Ancient Mitogenomes Shed Light on the Evolutionary 2 History and Biogeography of Sloths 3 Frédéric Delsuc,1,13,*, Melanie Kuch,2 Gillian C. Gibb,1,3, Emil Karpinski,2,4 Dirk 4 Hackenberger,2 Paul Szpak,5 Jorge G. Martínez,6 Jim I. Mead,7,8 H. Gregory 5 McDonald,9 Ross D. E. MacPhee,10 Guillaume Billet,11 Lionel Hautier,1,12 and 6 Hendrik N. Poinar2,* 7 Author list footnotes 8 1Institut des Sciences de l’Evolution de Montpellier -
Reveals That Glyptodonts Evolved from Eocene Armadillos
Molecular Ecology (2016) 25, 3499–3508 doi: 10.1111/mec.13695 Ancient DNA from the extinct South American giant glyptodont Doedicurus sp. (Xenarthra: Glyptodontidae) reveals that glyptodonts evolved from Eocene armadillos KIEREN J. MITCHELL,* AGUSTIN SCANFERLA,† ESTEBAN SOIBELZON,‡ RICARDO BONINI,‡ JAVIER OCHOA§ and ALAN COOPER* *Australian Centre for Ancient DNA, School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia, †CONICET-Instituto de Bio y Geociencias del NOA (IBIGEO), 9 de Julio No 14 (A4405BBB), Rosario de Lerma, Salta, Argentina, ‡Division Paleontologıa de Vertebrados, Facultad de Ciencias Naturales y Museo (UNLP), CONICET, Museo de La Plata, Paseo del Bosque, La Plata, Buenos Aires 1900, Argentina, §Museo Arqueologico e Historico Regional ‘Florentino Ameghino’, Int De Buono y San Pedro, Rıo Tercero, Cordoba X5850, Argentina Abstract Glyptodonts were giant (some of them up to ~2400 kg), heavily armoured relatives of living armadillos, which became extinct during the Late Pleistocene/early Holocene alongside much of the South American megafauna. Although glyptodonts were an important component of Cenozoic South American faunas, their early evolution and phylogenetic affinities within the order Cingulata (armoured New World placental mammals) remain controversial. In this study, we used hybridization enrichment and high-throughput sequencing to obtain a partial mitochondrial genome from Doedicurus sp., the largest (1.5 m tall, and 4 m long) and one of the last surviving glyptodonts. Our molecular phylogenetic analyses revealed that glyptodonts fall within the diver- sity of living armadillos. Reanalysis of morphological data using a molecular ‘back- bone constraint’ revealed several morphological characters that supported a close relationship between glyptodonts and the tiny extant fairy armadillos (Chlamyphori- nae). -
Oldest Known Dinosaurian Nesting Site and Reproductive Biology of the Early Jurassic Sauropodomorph Massospondylus
Oldest known dinosaurian nesting site and reproductive biology of the Early Jurassic sauropodomorph Massospondylus Robert R. Reisza,1, David C. Evansb, Eric M. Robertsc, Hans-Dieter Suesd, and Adam M. Yatese aDepartment of Biology, University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada; bRoyal Ontario Museum, Toronto, ON M5S 2C6, Canada; cSchool of Earth and Environmental Sciences, James Cook University, Townsville, 4811 QLD, Australia; dDepartment of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC 20013; and eBernard Price Institute for Palaeontological Research, University of the Witwatersrand, Wits 2050, Johannesburg, South Africa Edited by Steven M. Stanley, University of Hawaii, Honolulu, HI, and approved December 16, 2011 (received for review June 10, 2011) The extensive Early Jurassic continental strata of southern Africa clutches and recognition of the earliest known dinosaurian nesting have yielded an exceptional record of dinosaurs that includes complex at the Rooidraai locality. scores of partial to complete skeletons of the sauropodomorph Massospondylus, ranging from embryos to large adults. In 1976 an Results incomplete egg clutch including in ovo embryos of this dinosaur, Our work at the Rooidraai locality has yielded multiple in situ the oldest known example in the fossil record, was collected from clutches of eggs as well as fragmentary eggshell and bones, all from a road-cut talus, but its exact provenance was uncertain. An exca- a 2-m-thick interval of muddy siltstone 25 m from the top of the vation program at the site started in 2006 has yielded multiple in Lower Jurassic Upper Elliot Formation (“Stormberg Group,” situ egg clutches, documenting the oldest known dinosaurian Karoo Supergroup) (11). -
A Phylogeny and Timescale for Marsupial Evolution Based on Sequences for Five Nuclear Genes
J Mammal Evol DOI 10.1007/s10914-007-9062-6 ORIGINAL PAPER A Phylogeny and Timescale for Marsupial Evolution Based on Sequences for Five Nuclear Genes Robert W. Meredith & Michael Westerman & Judd A. Case & Mark S. Springer # Springer Science + Business Media, LLC 2007 Abstract Even though marsupials are taxonomically less diverse than placentals, they exhibit comparable morphological and ecological diversity. However, much of their fossil record is thought to be missing, particularly for the Australasian groups. The more than 330 living species of marsupials are grouped into three American (Didelphimorphia, Microbiotheria, and Paucituberculata) and four Australasian (Dasyuromorphia, Diprotodontia, Notoryctemorphia, and Peramelemorphia) orders. Interordinal relationships have been investigated using a wide range of methods that have often yielded contradictory results. Much of the controversy has focused on the placement of Dromiciops gliroides (Microbiotheria). Studies either support a sister-taxon relationship to a monophyletic Australasian clade or a nested position within the Australasian radiation. Familial relationships within the Diprotodontia have also proved difficult to resolve. Here, we examine higher-level marsupial relationships using a nuclear multigene molecular data set representing all living orders. Protein-coding portions of ApoB, BRCA1, IRBP, Rag1, and vWF were analyzed using maximum parsimony, maximum likelihood, and Bayesian methods. Two different Bayesian relaxed molecular clock methods were employed to construct a timescale for marsupial evolution and estimate the unrepresented basal branch length (UBBL). Maximum likelihood and Bayesian results suggest that the root of the marsupial tree is between Didelphimorphia and all other marsupials. All methods provide strong support for the monophyly of Australidelphia. Within Australidelphia, Dromiciops is the sister-taxon to a monophyletic Australasian clade. -
Distinguishing Quaternary Glyptodontine Cingulates in South America: How Informative Are Juvenile Specimens?
Distinguishing Quaternary glyptodontine cingulates in South America: How informative are juvenile specimens? CARLOS A. LUNA, IGNACIO A. CERDA, ALFREDO E. ZURITA, ROMINA GONZALEZ, M. CECILIA PRIETO, DIMILA MOTHÉ, and LEONARDO S. AVILLA Luna, C.A., Cerda, I.A., Zurita, A.E., Gonzalez, R., Prieto, M.C., Mothé, D., and Avilla, L.S. 2018. Distinguishing Quaternary glyptodontine cingulates in South America: How informative are juvenile specimens? Acta Palaeontologica Polonica 63 (1): 159–170. The subfamily Glyptodontinae (Xenarthra, Cingulata) comprises one of the most frequently recorded glyptodontids in South America. Recently, the North American genus Glyptotherium was recorded in South America, in addition to the genus Glyptodon. It has been shown that both genera shared the same geographic distribution in central-north and eastern areas of South America (Venezuela and Brazil, respectively). Although some characters allow differentiation between adult specimens of both genera, the morphological distinction between these two genera is rather difficult in juvenile specimens. In this contribution, a detailed morphological, morphometric and histological survey of a juvenile specimen of Glyptodontinae recovered from the Late Pleistocene of northern Brazil is performed. The relative lower osteoderms thickness, the particular morphology of the annular and radial sulci and the distal osseous projections of the caudal osteoderms suggest that the specimen belongs to the genus Glyptotherium. In addition, the validity of some statistical tools to distinguish between different ontogenetic stages and in some cases between genera is verified. The osteoderm microstructure of this juvenile individual is characterized by being composed of a cancellous internal core surrounded by a compact bone cortex. Primary bone tissue mostly consists of highly vascularized, woven-fibered bone tissue. -
High School Living Earth Evidence for Evolution Lessons Name: School: Teacher
DO NOT EDIT--Changes must be made through “File info” CorrectionKey=CA-B High School Living Earth Evidence for Evolution Lessons Name: School: Teacher: The Unit should take approximately 4 days complete. Read each section and complete the tasks. DO NOT EDIT--Changes must be made through “File info” CorrectionKey=CA-B FIGURE 1: This creosote ring in the Mojave Desert is estimated to be 11 700 years old . This makes it one of the oldest living organisms on Earth . The creosote bush is thought to be the most drought-tolerant plant in North America. It has a variety of adaptations to its desert environment, including its reproductive tendency to clone outward in rings rather than rely solely on seed production. The plant’s leaves are coated in a foul-tasting resin that protects it from water loss through evaporation and from grazing. It only opens its stomata in the morning to pull in carbon dioxide for photosynthesis from the more humid air and closes them as the day’s temperature increases. It also has a root system that consists of both an exceptionally long tap root and a vast network of shallow feeder roots. Creosote bushes exhibit two different shapes to fit different microclimates. In drier areas, the plant has a cone shape in which stems funnel rainwater into the taproot. In wetter areas, the bush has a more rounded shape that provides shade to its shallow feeder roots. PREDICT How do species change over time to adjust to varying conditions? DRIVING QUESTIONS As you move through the unit, gather evidence to help you answer the following questions. -
71St Annual Meeting Society of Vertebrate Paleontology Paris Las Vegas Las Vegas, Nevada, USA November 2 – 5, 2011 SESSION CONCURRENT SESSION CONCURRENT
ISSN 1937-2809 online Journal of Supplement to the November 2011 Vertebrate Paleontology Vertebrate Society of Vertebrate Paleontology Society of Vertebrate 71st Annual Meeting Paleontology Society of Vertebrate Las Vegas Paris Nevada, USA Las Vegas, November 2 – 5, 2011 Program and Abstracts Society of Vertebrate Paleontology 71st Annual Meeting Program and Abstracts COMMITTEE MEETING ROOM POSTER SESSION/ CONCURRENT CONCURRENT SESSION EXHIBITS SESSION COMMITTEE MEETING ROOMS AUCTION EVENT REGISTRATION, CONCURRENT MERCHANDISE SESSION LOUNGE, EDUCATION & OUTREACH SPEAKER READY COMMITTEE MEETING POSTER SESSION ROOM ROOM SOCIETY OF VERTEBRATE PALEONTOLOGY ABSTRACTS OF PAPERS SEVENTY-FIRST ANNUAL MEETING PARIS LAS VEGAS HOTEL LAS VEGAS, NV, USA NOVEMBER 2–5, 2011 HOST COMMITTEE Stephen Rowland, Co-Chair; Aubrey Bonde, Co-Chair; Joshua Bonde; David Elliott; Lee Hall; Jerry Harris; Andrew Milner; Eric Roberts EXECUTIVE COMMITTEE Philip Currie, President; Blaire Van Valkenburgh, Past President; Catherine Forster, Vice President; Christopher Bell, Secretary; Ted Vlamis, Treasurer; Julia Clarke, Member at Large; Kristina Curry Rogers, Member at Large; Lars Werdelin, Member at Large SYMPOSIUM CONVENORS Roger B.J. Benson, Richard J. Butler, Nadia B. Fröbisch, Hans C.E. Larsson, Mark A. Loewen, Philip D. Mannion, Jim I. Mead, Eric M. Roberts, Scott D. Sampson, Eric D. Scott, Kathleen Springer PROGRAM COMMITTEE Jonathan Bloch, Co-Chair; Anjali Goswami, Co-Chair; Jason Anderson; Paul Barrett; Brian Beatty; Kerin Claeson; Kristina Curry Rogers; Ted Daeschler; David Evans; David Fox; Nadia B. Fröbisch; Christian Kammerer; Johannes Müller; Emily Rayfield; William Sanders; Bruce Shockey; Mary Silcox; Michelle Stocker; Rebecca Terry November 2011—PROGRAM AND ABSTRACTS 1 Members and Friends of the Society of Vertebrate Paleontology, The Host Committee cordially welcomes you to the 71st Annual Meeting of the Society of Vertebrate Paleontology in Las Vegas. -
Extinct Mammal Used Its 'Sweet Spot' to Club Rivals 27 August 2009, by Lin Edwards
Extinct Mammal Used its 'Sweet Spot' to Club Rivals 27 August 2009, by Lin Edwards Blanco and his colleagues Washington W. Jones, and Andres Rinderknecht, decided to use the same methods as the sports studies to determine the location of the sweet spot on the tails of the glyptodonts. They studied fossilized remains of glyptodonts in the collections of three South American museums, and found that in many species of glyptodonts, such as Doedicurus clavicaudatus, the ball of bony plates at the end of Artistic reconstruction of Doedicurus clavicaudatus, with the tail was located at the center of percussion. a human for scale. The distal rigid caudal sheath and the mobile free rings are shown. Adapted from Ubilla et al. The plates were fused, turning the tail into a rigid (2008) (fig. 13.3, with permission of Perea, D. ed. 2008). weapon that concentrated the force onto the sweet spot in the tail's club, which is believed to have been covered in large horny spikes. The scientists likened the flexible part of the glyptodont's tail to a (PhysOrg.com) -- Scientists in Uruguay studying tennis player's arm, and the rigid club at the end of extinct mammals called glyptodonts have the tail to the tennis racket, with the sweet spot discovered they used a "sweet spot" in their tails, under the largest spikes. just like baseball players use the center of percussion (CP), or sweet spot, in their bats to hit Having the sweet spot in the position of the largest the ball with maximum power and minimum chance spikes meant the glyptodont tail clubs must have of injury. -
Mammalia, Cingulata, Glyptodontia)
Journal of South American Earth Sciences 66 (2016) 32e40 Contents lists available at ScienceDirect Journal of South American Earth Sciences journal homepage: www.elsevier.com/locate/jsames A reassessment of the taxonomic status of Paraglyptodon Castellanos, 1932 (Mammalia, Cingulata, Glyptodontia) * Laura E. Cruz a, , Juan C. Fernicola a, b, Matias Taglioretti c, Nestor Toledo d a CONICET, Consejo Nacional de Investigaciones Científicas y Tecnicas-Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”,Av.Angel Gallardo 470, Capital Federal, C1405DJR, Argentina b Departamento de Ciencias Basicas, Universidad Nacional de Lujan, Ruta 5 y Avenida Constitucion, 6700, Lujan, Buenos Aires, Argentina c CONICET-Instituto de Geología de Costas y del Cuaternario, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Mar del Plata, Dean Funes 3350, B7602AYL, Mar del Plata, Buenos Aires, Argentina d CONICET-Division Paleontología Vertebrados, Unidades de Investigacion Anexo Museo FCNyM-UNLP, Avenida 60 y 122, B1900FWA, La Plata, Argentina article info abstract Article history: Castellanos described and published about new genera of glyptodonts, according to a phylogenetic Received 21 September 2015 scheme mainly based on the evolution of the external surface of the dorsal carapace. Among these new Received in revised form genera, Castellanos proposed Paraglyptodon as the predecessor of Glyptodon, and included within Par- 4 November 2015 aglyptodon all known species of Glyptodontinae recovered from “horizontes pre-Ensenadenses”, and Accepted 20 November 2015 within Glyptodon all known species from “Horizontes pampeanos”, restricting the latter to the Quaternary. Available online 25 November 2015 All the species that belong to Paraglyptodon, that is Paraglyptodon chapalmalensis, Paraglyptodon uquiensis, Paraglyptodon dubius, and Paraglyptodon paranensis were established based on one, two or few Keywords: Osteoderm osteoderms, mostly from the dorsal carapace. -
(Dasypus) in North America Based on Ancient Mitochondrial DNA
bs_bs_banner A revised evolutionary history of armadillos (Dasypus) in North America based on ancient mitochondrial DNA BETH SHAPIRO, RUSSELL W. GRAHAM AND BRANDON LETTS Shapiro, B. Graham, R. W. & Letts, B.: A revised evolutionary history of armadillos (Dasypus) in North America based on ancient mitochondrial DNA. Boreas. 10.1111/bor.12094. ISSN 0300-9483. The large, beautiful armadillo, Dasypus bellus, first appeared in North America about 2.5 million years ago, and was extinct across its southeastern US range by 11 thousand years ago (ka). Within the last 150 years, the much smaller nine-banded armadillo, D. novemcinctus, has expanded rapidly out of Mexico and colonized much of the former range of the beautiful armadillo. The high degree of morphological similarity between these two species has led to speculation that they might be a single, highly adaptable species with phenotypical responses and geographical range fluctuations resulting from environmental changes. If this is correct, then the biology and tolerance limits for D. novemcinctus could be directly applied to the Pleistocene species, D. bellus. To investigate this, we isolated ancient mitochondrial DNA from late Pleistocene-age specimens of Dasypus from Missouri and Florida. We identified two genetically distinct mitochondrial lineages, which most likely correspond to D. bellus (Missouri) and D. novemcinctus (Florida). Surprisingly, both lineages were isolated from large specimens that were identified previously as D. bellus. Our results suggest that D. novemcinctus, which is currently classified as an invasive species, was already present in central Florida around 10 ka, significantly earlier than previously believed. Beth Shapiro ([email protected]), Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA; Russell W. -
Nine-Banded Armadillo (Dasypus Novemcinctus) Michael T
Nine-banded Armadillo (Dasypus novemcinctus) Michael T. Mengak Armadillos are present throughout much of Georgia and are considered an urban pest by many people. Armadillos are common in central and southern Georgia and can easily be found in most of Georgia’s 159 counties. They may be absent from the mountain counties but are found northward along the Interstate 75 corridor. They have poorly developed teeth and limited mobility. In fact, armadillos have small, peg-like teeth that are useful for grinding their food but of little value for capturing prey. No other mammal in Georgia has bony skin plates or a “shell”, which makes the armadillo easy to identify. Just like a turtle, the shell is called a carapace. Only one species of armadillo is found in Georgia and the southeastern U.S. However, 20 recognized species are found throughout Central and South America. These include the giant armadillo, which can weigh up to 130 pounds, and the pink fairy armadillo, which weighs less than 4 ounces. Taxonomy Order Cingulata – Armadillos Family Dasypodidae – Armadillo Nine-banded Armadillo – Dasypus novemcinctus The genus name Dasypus is thought to be derived from a Greek word for hare or rabbit. The armadillo is so named because the Aztec word for armadillo meant turtle-rabbit. The species name novemcinctus refers to the nine movable bands on the middle portion of their shell or carapace. Their common name, armadillo, is derived from a Spanish word meaning “little armored one.” Figure 1. Nine-banded Armadillo. Photo by author, 2014. Status Armadillos are considered both an exotic species and a pest. -
Pliocene), Falc6n State, Venezuela, Its Relationship with the Asterostemma Problem, and the Paleobiogeography of the Glyptodontinae ALFREDO A
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by RERO DOC Digital Library Pal&ontologische Zeitschrift 2008, Vol. 82•2, p. 139-152, 30-06-2008 New Glyptodont from the Codore Formation (Pliocene), Falc6n State, Venezuela, its relationship with the Asterostemma problem, and the paleobiogeography of the Glyptodontinae ALFREDO A. CARLINI, La Plata; ALFREDO E. ZURITA, La Plata; GUSTAVO J. SCILLATO-YANI~, La Plata; RODOLFO S,&,NCHEZ, Urumaco & ORANGEL A. AGUILERA, Coro with 3 figures CARLINI, A.A.; ZURITA,A.E.; SCILLATO-YANI~,G.J.; S.~NCHEZ,R. & AGUILERA,O.A. 2008. New Glyptodont from the Codore Formation (Pliocene), Falc6n State, Venezuela, its relationship with the Asterostemma problem, and the paleo- biogeography of the Glyptodontinae. - Palaontologische Zeitschrift 82 (2): 139-152, 3 figs., Stuttgart, 30. 6. 2008. Abstract: One of the basal Glyptodontidae groups is represented by the Propalaehoplophorinae (late Oligocene - mid- dle Miocene), whose genera (Propalaehoplophorus, Eucinepeltus, Metopotoxus, Cochlops, and Asterostemma) were initially recognized in Argentinian Patagonia. Among these, Asterostemma was characterized by its wide latitudinal distribution, ranging from southernmost (Patagonia) to northernmost (Colombia, Venezuela) South America. How- ever, the generic assignation of the Miocene species from Colombia and Venezuela (A.? acostae, A. gigantea, and A. venezolensis) was contested by some authors, who explicitly accepted the possibility that these species could corre- spond to a new genus, different from those recognized in southern areas. A new comparative study of taxa from Argen- tinian Patagonia, Colombia and Venezuela (together with the recognition of a new genus and species for the Pliocene of the latter country) indicates that the species in northern South America are not Propalaehoplophorinae, but represent the first stages in the cladogenesis of the Glyptodontinae glyptodontids, the history of which was heretofore restricted to the late Miocene - early Holocene of southernmost South America.