Order BELONIFORMES ADRIANICHTHYIDAE
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Appendix 1. (Online Supplementary Material) Species, Gliding Strategies
Appendix 1. (Online Supplementary Material) Species, gliding strategies, species distributions, geographic range sizes, habitat, and egg buoyancy characteristics used for concentrated changes tests. Species Gliding strategy Species distribution (reference #) Geographic range size Habitat (reference #) Egg buoyancy (reference #) Cheilopogon abei (Parin, 1996) 4 wings Indian, Indo-Pacific (1) 2 or more ocean basins meroepipelagic (1) Buoyant (2) Cheilopogon atrisignis (Jenkins, 1903) 4 wings Indian, Pacific (1) 2 or more ocean basins meroepipelgic (3) Buoyant (4) Cheilopogon cyanopterus (Valenciennes, 1847) 4 wings Atlantic, Indo-Pacific (2) 2 or more ocean basins meroepipelgic (3) Non-Buoyant (5) Cheilopogon dorsomacula (Fowler, 1944) 4 wings Pacific (1) within 1 ocean basin holoepipelagic (1) Buoyant (2) Cheilopogon exsiliens (Linnaeus, 1771) 4 wings Atlantic (2) within 1 ocean basin holoepipelagic (3) Buoyant (2,5) Cheilopogon furcatus (Mitchill, 1815) 4 wings Atlantic, Indian, Pacific (6) 2 or more ocean basins holoepipelagic (3) Non-Buoyant (5) Cheilopogon melanurus (Valenciennes, 1847) 4 wings Atlantic (7) within 1 ocean basin meroepipelagic (7) Non-Buoyant (5,8) Cheilopogon pinnatibarbatus (californicus) (Cooper, 1863) 4 wings eastern tropical Pacific (9) within 1 ocean basin meroepipelgic (3) Non-Buoyant (10) Cheilopogon spilonotopterus (Bleeker, 1865) 4 wings Indian and Pacific (1) 2 or more ocean basins meroepipelgic (3) Buoyant (4) Cheilopogon xenopterus (Gilbert, 1890) 4 wings eastern tropical Pacific (11) within 1 ocean basin -
Sapodilla Cayes Management Plan 2011-2016
Sapodilla Cayes Marine Reserve Management Plan 2011 – 2016 A component of Belize’s World Heritage Site SEA Belize National Office Placencia Village Stann Creek District Belize, Central America Phone: 501-523-3377 Fax: 501-523-3395 [email protected] Sapodilla Cayes Marine Reserve We would like to thank the Board members, programme managers and staff of the Southern Environmental Association, and more specifically of the Sapodilla Cayes Marine Reserve, for their participation and input into this management plan. Special thanks also go Isaias Majil (Fisheries Department), and to all stakeholders who participated in the workshops and meetings of the management planning process – particularly the tour guides and fishermen of Punta Gorda, who provided important input into the planning. A number of other people also provided technical input outside of the planning meetings and forums – particular thanks go to Melanie McField, Rachel Graham, Burton Shank, Adele Catzim and Guiseppe di Carlo, Lee Jones, Bert Frenz, John Tschirky, Russel, Vincente, Mrs. Garbutt, Armando, ReefCI, Adele Catzim and Guiseppe di Carlo. We would also like to thank Jocelyn Rae Finch and Timothy Smith for all their assistance in the preparation of the management plan, to Adam Lloyd (GIS Officer, Wildtracks) for the mapping input, and to Hilary Lohmann (Wildtracks) for editing assistance. We also appreciate the input into the previous draft management plan by Jack Nightingale in 2004, which provided much of the historical perspective for this plan. Financial support towards this management planning process was provided by NOAA (National Oceanic and Atmospheric Administration) Prepared By: Wildtracks, Belize [email protected] Sapodilla Cayes Marine Reserve – Management Plan 2011-2016 Contents Introduction .................................................................................................................................... -
Micromorphological Observation of the Anterior Gut of Sulawesi Medaka Fish (Oryzias Celebensis)
Int.J.Curr.Microbiol.App.Sci (2018) 7(2): 2942-2946 International Journal of Current Microbiology and Applied Sciences ISSN: 2319-7706 Volume 7 Number 02 (2018) Journal homepage: http://www.ijcmas.com Original Research Article https://doi.org/10.20546/ijcmas.2018.702.357 Micromorphological Observation of the Anterior Gut of Sulawesi Medaka Fish (Oryzias celebensis) Dwi Kesuma Sari1*, Irma Andriani2 and Khusnul Yaqin3 1Study Program of Veterinary Medicine, Faculty of Medicine, Hasanuddin University, Jl. Perintis kemerdekaan Km. 10, Makassar, South Sulawesi, Indonesia 2Pstudy Program of Biology, Faculty of Mathematics and Natural Sciences, Hasanuddin University, Indonesia 3Faculty of Marine Sciences and Fisheries, Hasanuddin University, Indonesia *Corresponding author ABSTRACT K e yw or ds The use of medaka fish as a candidate animal model has been started which has similarities Sulawesi medaka with the Zebra fish that was developed as an animal model. Sulawesi medaka fish (Oryzias fish, Anterior gut, celebensis) is a type of medaka fish that are endemic in the region of South Sulawesi. This Buccal cavity, research aims to observe the histology of anterior gut of Sulawesi medaka fish. Oesophagus Histological study on the anterior gut of Sulawesi medaka fish using buccal cavity and oesophagus organs. Histological observation showed that the mouth and buccal cavity are Article Info shared by the respiratory and digestive systems. Also in Sulawesi medaka fish we found Accepted: the lining of the buccal cavity consists of mucoid epithelium on a thick basement 26 January 2018 membrane with numerous goblet cells. In general the structure of the anterior gut system in Available Online: Sulawesi medaka fish similar with Zebra fish as well as other Teleostei fish. -
Early Stages of Fishes in the Western North Atlantic Ocean Volume
ISBN 0-9689167-4-x Early Stages of Fishes in the Western North Atlantic Ocean (Davis Strait, Southern Greenland and Flemish Cap to Cape Hatteras) Volume One Acipenseriformes through Syngnathiformes Michael P. Fahay ii Early Stages of Fishes in the Western North Atlantic Ocean iii Dedication This monograph is dedicated to those highly skilled larval fish illustrators whose talents and efforts have greatly facilitated the study of fish ontogeny. The works of many of those fine illustrators grace these pages. iv Early Stages of Fishes in the Western North Atlantic Ocean v Preface The contents of this monograph are a revision and update of an earlier atlas describing the eggs and larvae of western Atlantic marine fishes occurring between the Scotian Shelf and Cape Hatteras, North Carolina (Fahay, 1983). The three-fold increase in the total num- ber of species covered in the current compilation is the result of both a larger study area and a recent increase in published ontogenetic studies of fishes by many authors and students of the morphology of early stages of marine fishes. It is a tribute to the efforts of those authors that the ontogeny of greater than 70% of species known from the western North Atlantic Ocean is now well described. Michael Fahay 241 Sabino Road West Bath, Maine 04530 U.S.A. vi Acknowledgements I greatly appreciate the help provided by a number of very knowledgeable friends and colleagues dur- ing the preparation of this monograph. Jon Hare undertook a painstakingly critical review of the entire monograph, corrected omissions, inconsistencies, and errors of fact, and made suggestions which markedly improved its organization and presentation. -
Belonidae Bonaparte 1832 Needlefishes
ISSN 1545-150X California Academy of Sciences A N N O T A T E D C H E C K L I S T S O F F I S H E S Number 16 September 2003 Family Belonidae Bonaparte 1832 needlefishes By Bruce B. Collette National Marine Fisheries Service Systematics Laboratory National Museum of Natural History, Washington, DC 20560–0153, U.S.A. email: [email protected] Needlefishes are a relatively small family of beloniform fishes (Rosen and Parenti 1981 [ref. 5538], Collette et al. 1984 [ref. 11422]) that differ from other members of the order in having both the upper and the lower jaws extended into long beaks filled with sharp teeth (except in the neotenic Belonion), the third pair of upper pharyngeal bones separate, scales on the body relatively small, and no finlets following the dorsal and anal fins. The nostrils lie in a pit anterior to the eyes. There are no spines in the fins. The dorsal fin, with 11–43 rays, and anal fin, with 12–39 rays, are posterior in position; the pelvic fins, with 6 soft rays, are located in an abdominal position; and the pectoral fins are short, with 5–15 rays. The lateral line runs down from the pectoral fin origin and then along the ventral margin of the body. The scales are small, cycloid, and easily detached. Precaudal vertebrae number 33–65, caudal vertebrae 19–41, and total verte- brae 52–97. Some freshwater needlefishes reach only 6 or 7 cm (2.5 or 2.75 in) in total length while some marine species may attain 2 m (6.5 ft). -
Tennessee Fish Species
The Angler’s Guide To TennesseeIncluding Aquatic Nuisance SpeciesFish Published by the Tennessee Wildlife Resources Agency Cover photograph Paul Shaw Graphics Designer Raleigh Holtam Thanks to the TWRA Fisheries Staff for their review and contributions to this publication. Special thanks to those that provided pictures for use in this publication. Partial funding of this publication was provided by a grant from the United States Fish & Wildlife Service through the Aquatic Nuisance Species Task Force. Tennessee Wildlife Resources Agency Authorization No. 328898, 58,500 copies, January, 2012. This public document was promulgated at a cost of $.42 per copy. Equal opportunity to participate in and benefit from programs of the Tennessee Wildlife Resources Agency is available to all persons without regard to their race, color, national origin, sex, age, dis- ability, or military service. TWRA is also an equal opportunity/equal access employer. Questions should be directed to TWRA, Human Resources Office, P.O. Box 40747, Nashville, TN 37204, (615) 781-6594 (TDD 781-6691), or to the U.S. Fish and Wildlife Service, Office for Human Resources, 4401 N. Fairfax Dr., Arlington, VA 22203. Contents Introduction ...............................................................................1 About Fish ..................................................................................2 Black Bass ...................................................................................3 Crappie ........................................................................................7 -
Collection of Freshwater and Coastal Fishes from Sulawesi Tenggara, Indonesia [Koleksi Ikan-Ikan Air Tawar Dan Pantai Di Sulawesi Tenggara] Lynne R
Jurnal Iktiologi Indonesia, 14(1):1-19 Collection of freshwater and coastal fishes from Sulawesi Tenggara, Indonesia [Koleksi ikan-ikan air tawar dan pantai di Sulawesi Tenggara] Lynne R. Parenti1,, Renny K. Hadiaty2, Daniel N. Lumbantobing1,3 1National Museum of Natural History, Smithsonian Institution PO Box 37012, NHB MRC 159, Washington, D.C. 20013-7012 USA 2Museum Zoologicum Bogoriense, Division of Zoology, Research Center for Biology Indonesian Institute of Sciences (LIPI) Jln. Raya Jakarta-Bogor Km 46, Cibinong 16911, Indonesia 3Florida Museum of Natural History Museum Road and Newell Drive, Gainesville, FL 32611-7800. Received: October 9, 2013; Accepted: January 21, 2014 Abstract We report 69 fish species in 34 teleost families nearly all collected during a preliminary survey of the Sungai Pohara and coastal localities in Sulawesi Tenggara, including Muna Island, in June 2010. Of these species, nine are introduced or exotic and another is questionably native. The family Gobiidae is the most diverse taxon, represented by 14 native species. Atherinomorph fishes of the family Adrianichthyidae are represented in the province by four endemic species and two others that are widespread, all in the genus Oryzias. This fish fauna contrasts sharply with the riverine ichthyo- fauna of the adjacent Sulawesi Tenggara islands of Buton and Kabaena in which there are reportedly no ricefishes and few endemics. New species are being described by the field team and collaborators. Our ultimate goal is to discover, describe, highlight, understand and encourage the conservation of the native freshwater and coastal fish biota of Sula- wesi. Keywords: endemic fishes, introduced species, Oryzias, Sungai Pohara Abstrak Kami melaporkan hasil survei pendahuluan di Sungai Pohara dan perairan pantai di Sulawesi Tenggara, termasuk Pulau Muna. -
© Iccat, 2007
A5 By-catch Species APPENDIX 5: BY-CATCH SPECIES A.5 By-catch species By-catch is the unintentional/incidental capture of non-target species during fishing operations. Different types of fisheries have different types and levels of by-catch, depending on the gear used, the time, area and depth fished, etc. Article IV of the Convention states: "the Commission shall be responsible for the study of the population of tuna and tuna-like fishes (the Scombriformes with the exception of Trichiuridae and Gempylidae and the genus Scomber) and such other species of fishes exploited in tuna fishing in the Convention area as are not under investigation by another international fishery organization". The following is a list of by-catch species recorded as being ever caught by any major tuna fishery in the Atlantic/Mediterranean. Note that the lists are qualitative and are not indicative of quantity or mortality. Thus, the presence of a species in the lists does not imply that it is caught in significant quantities, or that individuals that are caught necessarily die. Skates and rays Scientific names Common name Code LL GILL PS BB HARP TRAP OTHER Dasyatis centroura Roughtail stingray RDC X Dasyatis violacea Pelagic stingray PLS X X X X Manta birostris Manta ray RMB X X X Mobula hypostoma RMH X Mobula lucasana X Mobula mobular Devil ray RMM X X X X X Myliobatis aquila Common eagle ray MYL X X Pteuromylaeus bovinus Bull ray MPO X X Raja fullonica Shagreen ray RJF X Raja straeleni Spotted skate RFL X Rhinoptera spp Cownose ray X Torpedo nobiliana Torpedo -
Evolution of Different Y Chromosomes in Two Medaka Species, Oryzias Dancena and O
Copyright Ó 2007 by the Genetics Society of America DOI: 10.1534/genetics.106.068247 Evolution of Different Y Chromosomes in Two Medaka Species, Oryzias dancena and O. latipes Yusuke Takehana,*,1,2 Diana Demiyah,*,1 Kiyoshi Naruse,† Satoshi Hamaguchi* and Mitsuru Sakaizumi* *Graduate School of Science and Technology, Niigata University, Ikarashi, Niigata 950-2181, Japan and †Department of Biological Science, School of Science, University of Tokyo, Bunkyo-ku, Tokyo, 113-0033, Japan Manuscript received November 14, 2006 Accepted for publication December 19, 2006 ABSTRACT Although the sex-determining gene DMY has been identified on the Y chromosome in the medaka (Oryzias latipes), this gene is absent in most Oryzias species, suggesting that closely related species have different sex-determining genes. Here, we investigated the sex-determination mechanism in O. dancena, which does not possess the DMY gene. Since heteromorphic sex chromosomes have not been reported in this species, a progeny test of sex-reversed individuals produced by hormone treatment was performed. Sex-reversed males yielded all-female progeny, indicating that O. dancena has an XX/XY sex-determination system. To uncover the cryptic sex chromosomes, sex-linked DNA markers were screened using expressed sequence tags (ESTs) established in O. latipes. Linkage analysis of isolated sex-linked ESTs showed a conserved synteny between the sex chromosomes in O. dancena and an autosome in O. latipes. Fluorescence in situ hybridization (FISH) analysis of these markers confirmed that sex chromosomes of these species are not homologous. These findings strongly suggest an independent origin of sex chromosomes in O. dancena and O. latipes. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences.