A Stenohaline Medaka, Oryzias Woworae, Increases Expression of Gill Na+, K+-Atpase and Na+, K+, 2Cl– Cotransporter 1 to Tolerate Osmotic Stress
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
A Review of Salinity Problems of Organisms in United States Coastal Areas Subject to the Effects of Engineering Works
Gulf and Caribbean Research Volume 4 Issue 3 January 1974 A Review of Salinity Problems of Organisms in United States Coastal Areas Subject to the Effects of Engineering Works Gordon Gunter Gulf Coast Research Laboratory Buena S. Ballard Gulf Coast Research Laboratory A. Venkataramiah Gulf Coast Research Laboratory Follow this and additional works at: https://aquila.usm.edu/gcr Part of the Marine Biology Commons Recommended Citation Gunter, G., B. S. Ballard and A. Venkataramiah. 1974. A Review of Salinity Problems of Organisms in United States Coastal Areas Subject to the Effects of Engineering Works. Gulf Research Reports 4 (3): 380-475. Retrieved from https://aquila.usm.edu/gcr/vol4/iss3/5 DOI: https://doi.org/10.18785/grr.0403.05 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf and Caribbean Research by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. A REVIEW OF SALINITY PROBLEMS OF ORGANISMS IN UNITED STATES COASTAL AREAS SUBJECT TO THE EFFECTS OF ENGINEERING WORKS’ bY GORDON GUNTER, BUENA S. BALLARD and A. VENKATARAMIAH Gulf Coast Research Laboratory Ocean Springs, Mississippi ABSTRACT The nongaseous substances that normally move in and out of cells are metabolites, water and salts. The common salts in water determine its salinity, and the definition of sea water salinity and its composition are discussed. The relationships of salinity to all phyla of animals living in the coastal waters are reviewed, with emphasis on the estuaries of the Gulf and Atlantic coasts of the United States, which are particularly influenced by coastal engineering works and changes of salinity caused thereby. -
Online Dictionary of Invertebrate Zoology Parasitology, Harold W
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Armand R. Maggenti Online Dictionary of Invertebrate Zoology Parasitology, Harold W. Manter Laboratory of September 2005 Online Dictionary of Invertebrate Zoology: S Mary Ann Basinger Maggenti University of California-Davis Armand R. Maggenti University of California, Davis Scott Gardner University of Nebraska-Lincoln, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/onlinedictinvertzoology Part of the Zoology Commons Maggenti, Mary Ann Basinger; Maggenti, Armand R.; and Gardner, Scott, "Online Dictionary of Invertebrate Zoology: S" (2005). Armand R. Maggenti Online Dictionary of Invertebrate Zoology. 6. https://digitalcommons.unl.edu/onlinedictinvertzoology/6 This Article is brought to you for free and open access by the Parasitology, Harold W. Manter Laboratory of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Armand R. Maggenti Online Dictionary of Invertebrate Zoology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Online Dictionary of Invertebrate Zoology 800 sagittal triact (PORIF) A three-rayed megasclere spicule hav- S ing one ray very unlike others, generally T-shaped. sagittal triradiates (PORIF) Tetraxon spicules with two equal angles and one dissimilar angle. see triradiate(s). sagittate a. [L. sagitta, arrow] Having the shape of an arrow- sabulous, sabulose a. [L. sabulum, sand] Sandy, gritty. head; sagittiform. sac n. [L. saccus, bag] A bladder, pouch or bag-like structure. sagittocysts n. [L. sagitta, arrow; Gr. kystis, bladder] (PLATY: saccate a. [L. saccus, bag] Sac-shaped; gibbous or inflated at Turbellaria) Pointed vesicles with a protrusible rod or nee- one end. dle. saccharobiose n. -
Growth, Tolerance to Low Salinity, and Osmoregulation in Decapod Crustacean Larvae
Vol. 12: 249–260, 2011 AQUATIC BIOLOGY Published online June 1 doi: 10.3354/ab00341 Aquat Biol Growth, tolerance to low salinity, and osmoregulation in decapod crustacean larvae Gabriela Torres1, 2,*, Luis Giménez1, Klaus Anger2 1School of Ocean Sciences, Bangor University, Menai Bridge, LL59 5AB, UK 2Biologische Anstalt Helgoland, Foundation Alfred Wegener Institute for Polar and Marine Research, 27498 Helgoland, Germany ABSTRACT: Marine invertebrate larvae suffer high mortality due to abiotic and biotic stress. In planktotrophic larvae, mortality may be minimised if growth rates are maximised. In estuaries and coastal habitats however, larval growth may be limited by salinity stress, which is a key factor select- ing for particular physiological adaptations such as osmoregulation. These mechanisms may be ener- getically costly, leading to reductions in growth. Alternatively, the metabolic costs of osmoregulation may be offset by the capacity maintaining high growth at low salinities. Here we attempted identify general response patterns in larval growth at reduced salinities by comparing 12 species of decapod crustaceans with differing levels of tolerance to low salinity and differing osmoregulatory capability, from osmoconformers to strong osmoregulators. Larvae possessing tolerance to a wider range in salinity were only weakly affected by low salinity levels. Larvae with a narrower tolerance range, by contrast, generally showed reductions in growth at low salinity. The negative effect of low salinity on growth decreased with increasing osmoregulatory capacity. Therefore, the ability to osmoregulate allows for stable growth. In euryhaline larval decapods, the capacity to maintain high growth rates in physically variable environments such as estuaries appears thus to be largely unaffected by the energetic costs of osmoregulation. -
Evolution of Different Y Chromosomes in Two Medaka Species, Oryzias Dancena and O
Copyright Ó 2007 by the Genetics Society of America DOI: 10.1534/genetics.106.068247 Evolution of Different Y Chromosomes in Two Medaka Species, Oryzias dancena and O. latipes Yusuke Takehana,*,1,2 Diana Demiyah,*,1 Kiyoshi Naruse,† Satoshi Hamaguchi* and Mitsuru Sakaizumi* *Graduate School of Science and Technology, Niigata University, Ikarashi, Niigata 950-2181, Japan and †Department of Biological Science, School of Science, University of Tokyo, Bunkyo-ku, Tokyo, 113-0033, Japan Manuscript received November 14, 2006 Accepted for publication December 19, 2006 ABSTRACT Although the sex-determining gene DMY has been identified on the Y chromosome in the medaka (Oryzias latipes), this gene is absent in most Oryzias species, suggesting that closely related species have different sex-determining genes. Here, we investigated the sex-determination mechanism in O. dancena, which does not possess the DMY gene. Since heteromorphic sex chromosomes have not been reported in this species, a progeny test of sex-reversed individuals produced by hormone treatment was performed. Sex-reversed males yielded all-female progeny, indicating that O. dancena has an XX/XY sex-determination system. To uncover the cryptic sex chromosomes, sex-linked DNA markers were screened using expressed sequence tags (ESTs) established in O. latipes. Linkage analysis of isolated sex-linked ESTs showed a conserved synteny between the sex chromosomes in O. dancena and an autosome in O. latipes. Fluorescence in situ hybridization (FISH) analysis of these markers confirmed that sex chromosomes of these species are not homologous. These findings strongly suggest an independent origin of sex chromosomes in O. dancena and O. latipes. -
Marine Science Virtual Lesson Biological Oceanography Photo Credit: Getty Images
Marine Science Virtual Lesson Biological Oceanography Photo credit: Getty Images • The study of how plants and animals interact with What is each other and their marine environment. • How organisms affect and are affected by chemical, Biological physical, and geological oceanography Oceanography? • Studies life in the ocean from tiny algae to giant blue whales Marine Environment Photo credit: Getty Images Biological Pump Some CO2 is • Carbon sink is part of the released through biological pump respiration • The pump includes upwelling that brings nutrient back up the water column • Releasing some CO2 through respiration Upwelling of nutrients Photosynthesis • Sunlight and CO2 is used to make sugar and oxygen • Can be used as fuel for an organism's movement and biological processes • Such as: circulatory system, digestive system, and respiration Where Can You Find Life in the Ocean • Plants and algae are found in the euphotic zone of the ocean • Where light reaches • Animals are found at all depths of the ocean • Most live-in the euphotic zone where there is more prey • 90% of species live and rely in euphotic zones • the littoral (close to shore) and sublittoral (coastal areas) zones Photo credit: libretexts.org Photo credit: Christian Sardet/CNRS/Tara Expéditions Plankton • Drifting animals • Follow the ocean currents (don’t swim) • Holoplankton • Spend entire lives in water column • Meroplankton • Temporary residents of plankton community • Larvae of benthic organisms Plankton 2.0 • Phytoplankton • Autotrophic (photosynthetic) Photo -
Fish Fauna of the Sikao Creek Mangrove Estuary, Trang, Thailand
FISHERIES SCIENCE 2002; 68: 10–17 Original Article Fish fauna of the Sikao Creek mangrove estuary, Trang, Thailand Prasert TONGNUNUI,1 Kou IKEJIMA,2–4* Takeshi YAMANE,4 Masahiro HORINOUCHI,4 Tomon MEDEJ,1 Mitsuhiko SANO,4 Hisashi KUROKURA4 AND Toru TANIUCHI2a 1Faculty of Science and Fisheries Technology, Rajamangala Institute of Technology, Sikao, Trang 92150, Thailand, 2Department of Aquatic Bioscience, Graduate School of Agricultural and Life Sciences, 3Asian Natural Environmental Science Center and 4Department of Global Agricultural Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo, Tokyo 113-8657, Japan ABSTRACT: Between September 1996 and March 1999, a total of 135 fish species in 43 families were recorded from the mangrove estuary of Sikao Creek, Trang Province, Thailand, using two sizes of beach seine and a bag net. A checklist of the species is given, with preliminary descriptions of their assemblage structure. In terms of the number of species per family, Gobiidae was the most diverse (28 species), followed by Leiognathidae (11 species) and Engraulidae (10 species). In terms of individual numbers, Engraulidae, Leiognathidae and Ambassidae were the most dominant, whereby the 20 most abundant species comprised 88.5% of the total number of individuals collected. The fish assemblage structure was compared with published accounts of other tropical Indo-West Pacific mangrove estuaries, and found to be similar to those of tropical Australia. Although a grater number of species were recorded from Sikao Creek than in comparable studies in other geographic regions, all of the studies were similar in that they have relatively few species that are clearly dominant in abundance. -
Effect of Diuron on Embryo-Larval Development of Javanese Medaka (Oryzias Javanicus, Bleeker 1854)
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 13 September 2020 doi:10.20944/preprints202009.0290.v1 Article Effect of diuron on embryo-larval development of Javanese medaka (Oryzias javanicus, Bleeker 1854) Musa Adamu Ibrahim1, 2, Syaizwan Zahmir Zulkifli1,3 *, Mohammad Noor Amal Azmai1,5, Ferdaus Mohamat-Yusuff3,4, Ahmad Ismail1 1 Department of Biology, Faculty of Science, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia; [email protected] (M.A.I.); [email protected] (S.Z.Z.); [email protected] (M.N.A.A.); [email protected] (A.I.) 2 Department of Biological Sciences, Faculty of Science, University of Maiduguri, P.M.B. 1069, Maiduguri, Nigeria; [email protected] (M.A.I.) 3 International Institute of Aquaculture and Aquatic Sciences (i-AQUAS), Universiti Putra Malaysia, Batu 7, Jalan Kemang 6, Teluk Kemang 71050 Si Rusa, Port Dickson, Negeri Sembilan, Malaysia; [email protected] (S.Z.Z.); [email protected] (F.M.Y.) 4 Department of Environmental Sciences, Faculty of Environmental Studies, Universiti Putra Malaysia, 43400, UPM Serdang, Selangor, Malaysia; [email protected] (F.M.Y.) 5 Institute of Bioscience, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia; [email protected] (M.N.A.A.) * Correspondence: [email protected]; Tel.: +60-13-3975787 (S.Z.Z.) Abstract: Some herbicides exert hormetic or biphasic non-monotonic dose-response (NMDR), which is one of the major challenges for ecological risk assessment (ERA) of pesticides pollution. In this study, fish embryo toxicity test (FET) with Javanese medaka (Oryzias javanicus) to sublethal concentration of diuron was determined. -
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Journal ofThreatened JoTT TaxaBuilding evidence for conservation globally 10.11609/jott.2020.12.10.16195-16406 www.threatenedtaxa.org 26 July 2020 (Online & Print) Vol. 12 | No. 10 | Pages: 16195–16406 ISSN 0974-7907 (Online) | ISSN 0974-7893 (Print) PLATINUM OPEN ACCESS Dedicated to Dr. P. Lakshminarasimhan ISSN 0974-7907 (Online); ISSN 0974-7893 (Print) Publisher Host Wildlife Information Liaison Development Society Zoo Outreach Organization www.wild.zooreach.org www.zooreach.org No. 12, Thiruvannamalai Nagar, Saravanampatti - Kalapatti Road, Saravanampatti, Coimbatore, Tamil Nadu 641035, India Ph: +91 9385339863 | www.threatenedtaxa.org Email: [email protected] EDITORS English Editors Mrs. Mira Bhojwani, Pune, India Founder & Chief Editor Dr. Fred Pluthero, Toronto, Canada Dr. Sanjay Molur Mr. P. Ilangovan, Chennai, India Wildlife Information Liaison Development (WILD) Society & Zoo Outreach Organization (ZOO), 12 Thiruvannamalai Nagar, Saravanampatti, Coimbatore, Tamil Nadu 641035, Web Development India Mrs. Latha G. Ravikumar, ZOO/WILD, Coimbatore, India Deputy Chief Editor Typesetting Dr. Neelesh Dahanukar Indian Institute of Science Education and Research (IISER), Pune, Maharashtra, India Mr. Arul Jagadish, ZOO, Coimbatore, India Mrs. Radhika, ZOO, Coimbatore, India Managing Editor Mrs. Geetha, ZOO, Coimbatore India Mr. B. Ravichandran, WILD/ZOO, Coimbatore, India Mr. Ravindran, ZOO, Coimbatore India Associate Editors Fundraising/Communications Dr. B.A. Daniel, ZOO/WILD, Coimbatore, Tamil Nadu 641035, India Mrs. Payal B. Molur, Coimbatore, India Dr. Mandar Paingankar, Department of Zoology, Government Science College Gadchiroli, Chamorshi Road, Gadchiroli, Maharashtra 442605, India Dr. Ulrike Streicher, Wildlife Veterinarian, Eugene, Oregon, USA Editors/Reviewers Ms. Priyanka Iyer, ZOO/WILD, Coimbatore, Tamil Nadu 641035, India Subject Editors 2016–2018 Fungi Editorial Board Ms. -
Chapter 12 Lecture
ChapterChapter 1 12 Clickers Lecture Essentials of Oceanography Eleventh Edition Marine Life and the Marine Environment Alan P. Trujillo Harold V. Thurman © 2014 Pearson Education, Inc. Chapter Overview • Living organisms, including marine species, are classified by characteristics. • Marine organisms are adapted to the ocean’s physical properties. • The marine environment has distinct divisions. © 2014 Pearson Education, Inc. Classification of Life • Classification based on physical characteristics • DNA sequencing allows genetic comparison. © 2014 Pearson Education, Inc. Classification of Life • Living and nonliving things made of atoms • Life consumes energy from environment. • NASA’s definition encompasses potential for extraterrestrial life. © 2014 Pearson Education, Inc. Classification of Life • Working definition of life • Living things can – Capture, store, and transmit energy – Reproduce – Adapt to environment – Change over time © 2014 Pearson Education, Inc. Classification of Life • Three domains or superkingdoms • Bacteria – simple life forms without nuclei • Archaea – simple, microscopic creatures • Eukarya – complex, multicellular organisms – Plants and animals – DNA in discrete nucleus © 2014 Pearson Education, Inc. Classification of Living Organisms • Five kingdoms – Monera – Protoctista – Fungi – Plantae – Animalia © 2014 Pearson Education, Inc. Five Kingdoms of Organisms • Monera – Simplest organisms, single-celled – Cyanobacteria, heterotrophic bacteria, archaea • Protoctista – Single- and multicelled with nucleus – -
Osmoregulation in Pisces Osmoregulation Is a Type of Homeostasis Which Controls Both the Volume of Water and the Concentration of Electrolytes
Osmoregulation in Pisces Osmoregulation is a type of homeostasis which controls both the volume of water and the concentration of electrolytes. It is the active regulation of the osmotic pressure of an organism’s body fluids, detected by osmoreceptors. Organisms in aquatic and terrestrial environments must maintain the right concentration of solutes and amount of water in their body fluids. The nature of osmoregulatory problem is quite different in various groups of fishes in different environments. There is always a difference between the salinity of a fish’s environment and the inside of its body, whether the fish is fresh water or marine. Regardless of the salinity of their external environment, fish use osmoregulation to fight the process of diffusion and osmosis and maintain the internal balance of salt and water essential to their efficiency and survival. Kidneys do play a role in osmoregulation but overall extra-renal mechanisms are equally more important sites for maintaining osmotic homeostasis. Extra-renal sites include the gill tissue, skin, the alimentary tract, the rectal gland and the urinary bladder. 1. Stenohaline and Euryhaline Fishes: Stenohaline (steno=narrow, haline=salt): Most of the species live either in fresh water or marine water and can survive only small changes in salinity. These fishes have a limited salinity tolerance and are called stenohaline. e.g., Goldfish Euryhaline (eury=wide, haline=salt): Some species can tolerate wide salinity changes and inhabit both fresh water and sea water. They are called euryhaline. e.g., Salmon . 2. Osmotic challenges Osmoconformers, are isosmotic with their surrounding and do not maintain their osmolarity.