Synthesis and Structure of a Substituted Pyridazine Kiranmai Byrichetti Western Kentucky University, [email protected]
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[1,2,5]Thiadiazolo[3,4-D]Pyridazine As an Internal Acceptor in the DA-Π-A
Article [1,2,5]Thiadiazolo[3,4-d]Pyridazine as an Internal Acceptor in the D-A-π-A Organic Sensitizers for Dye- Sensitized Solar Cells Timofey N. Chmovzh 1, Ekaterina A. Knyazeva 1,2, Ellie Tanaka 3, Vadim V. Popov 2, Ludmila V. Mikhalchenko 1, Neil Robertson 3,* and Oleg A. Rakitin 1,2,* 1 N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 119991 Moscow, Russia; [email protected] (O.A.R.); [email protected] (T.N.C.); [email protected] (E.A.K.); [email protected] (L.V.M.) 2 Nanotechnology Education and Research Center, South Ural State University, 454080 Chelyabinsk, Russia; [email protected] 3 EaStCHEM School of Chemistry, University of Edinburgh, Edinburgh EH9 3FJ, UK; [email protected] * Correspondence: Correspondence: [email protected] (N.R.); [email protected] (O.A.R.); Tel.: +44-131-650-4755 (N.R.); +7-499-135-5327(O.A.R.) Academic Editor: Panayiotis A. Koutentis Received: 4 April 2019; Accepted: 19 April 2019; Published: 22 April 2019 Abstract: Four new D-A-π-A metal-free organic sensitizers for dye-sensitized solar cells (DSSCs), with [1,2,5]thiadiazolo[3 ,4-d]pyridazine as internal acceptor, thiophene unit as π-spacer and cyanoacrylate as anchoring electron acceptor, have been synthesized. The donor moiety was introduced into [1,2,5]thiadiazolo[3,4-d]pyridazine by nucleophilic aromatic substitution and Suzuki cross-coupling reactions, allowing design of D-A-π-A sensitizers with the donor attached to the internal heterocyclic acceptor not only by the carbon atom, as it is in a majority of DSSCs, but by the nitrogen atom also. -
Structure-Based Discovery and Synthesis of Potential Transketolase Inhibitors
Supplementary Materials Structure-Based Discovery and Synthesis of Potential Transketolase Inhibitors Jingqian Huo 1,†, Bin Zhao 2,†, Zhe Zhang 1, Jihong Xing 3, Jinlin Zhang 1,*, Jingao Dong 1,3,* and Zhijin Fan 2,4,* 1 College of Plant Protection, Agricultural University of Hebei, Baoding 071001, China; [email protected] (J.H.); [email protected] (Z.Z.) 2 State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin 300071, P. R. China; [email protected] 3 College of life science, Agricultural University of Hebei, Baoding 071000, China; [email protected] 4 Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Nankai University, Tianjin 300071, China * Correspondence: [email protected] (J.Z.); [email protected] (J.D.); [email protected] (Z.F.) † These authors contributed equally to this work. Table of Contents Table S1. The docking affinity of the compounds with transketolase. Figure S1. The binding mode between the small molecules and transketolase. Figure S2. Molecular structure of compound 4b. The appearance, yields, melting points and spectral data of the synthesized compounds. Table S1. The docking affinity of the compounds with transketolase ZINC Affinity ZINC Affinity ZINC Affinity ZINC Affinity ZINC Affinity Compd. (kcal/mol) Compd. (kcal/mol) Compd. (kcal/mol) Compd. (kcal/mol) Compd. (kcal/mol) 12007063 -9.1 05776152 -8.7 12929396 -8.6 67603588 -8.5 41585313 -8.5 19961402 -9 72020240 -8.7 95353804 -8.6 72472311 -8.5 46127235 -8.5 12126699 -9 16283531 -8.7 95353805 -8.6 72472321 -8.5 49169766 -8.5 23186631 -8.8 08654961 -8.6 95381421 -8.6 72472332 -8.5 05175849 -8.5 12130512 -8.8 58191888 -8.6 12130884 -8.6 21941633 -8.5 19706239 -8.5 Molecules 2018, 23, 2116; doi:10.3390/molecules23092116 www.mdpi.com/journal/molecules Molecules 2018, 23, 2116 2 of 11 a b c d e f Figure S1. -
Benzofuran Synthesis Through Iodocyclization Reactions: Recent Advances
MOJ Bioorganic & Organic Chemistry Mini Review Open Access Benzofuran synthesis through iodocyclization reactions: recent advances Abstract Volume 1 Issue 7 - 2017 Recent advancements (2014-17) in the benzofuran synthesis through iodocyclization Saurabh Mehta have been summarized. The successful use of various iodinating agents, bases, additives Department of Applied Chemistry, Delhi Technological etc. make iodocyclization a versatile and efficient methodology. The methodology has University, India been applied for the synthesis of more complex benzofuran derivatives, and may open interesting avenues in the area of heterocyclic chemistry (Figure 1). Correspondence: Saurabh Mehta, Department of Applied O-LG Chemistry, Delhi Technological University, Bawana Road, Delhi, + O R1 I 1 2 110042 India, Tel +9188 0066 5868, R R Email [email protected], [email protected] R2 I Received: December 17, 2017 | Published: December 29, 2017 LG = H, Me or other Protecting group 1 R = H, Me, OMe, I, CO2Me, etc. R2 = H, aryl, alkyl, alkenyl, etc. Figure 1 Keywords: annulations, alkyne, benzofuran, iodocyclization, heterocycle Introduction derivatives were obtained in high yields (84%−100%) under mild conditions. The authors demonstrated that the choice of bis(2,4,6- Benzo[b]furan is a privileged heterocyclic scaffold. Several collidine)iodonium hexafluorophosphate [I(coll)2PF6] as the compounds containing this scaffold have interesting biological iodinating agent was necessary for the success of the reaction. Also, 1 activities, such as anti-cancer, anti-viral, anti-inflammatory, etc. Few the ethoxyethyl ether group acted as a protecting group as well as a 2 derivatives are even used as commercial drugs, such as Amiodarone, good leaving group. -
A SCF MO Treatment of Some Tropone Derivatives* M
CROATICA CHEMICA ACTA 42 (1 97 0) 1 <CCA-565 539.19:547.5 Original Scientific Paper A SCF MO Treatment of Some Tropone Derivatives* M. J. S. Dewar and N. Trinajstić** Department of Chemistry, The University of Texas, Austin, Texas 78712, U.S.A. R e c e iv e d A u g u s t 9, 1969 Recent work in these laboratories has led to the development of a semiempirical SCF MO treatment which seems to give extremely good results for ground States of conjugated molecules of ali kinds composed of carbon, hydrogen, nitrogen and oxygen. We have now applied this treatment to a problem of current interest, namely the structures of tropolone and tropone deri vatives. The calculations lead to the conclusion that neither of these ring systems is in itself aromatic, while tropone is now re- cognized to be polyenoid, tropolone still seems to be generally regarded as aromatic. This belief, however, arose from the behavior of tropolone derivatives in strong acid solution, where they exist as hydroxy tropylium derivatives, or in alkali where they form mesomeric anions. Calculated heats of formation, resonance ener- gies, and bond lengths are reported. INTRODU CTION Some time ago one of us1 concluded on the basis of available Chemical <evidence that stipitatic acid and colchicine must contain a novel aromatic system, tropolone (I), containing a seven-membered ring. Subsequent work not only confirmed this conclusion but also led to the synthesis of tropolone2 itself, and of the related tropone3 (II); both these compounds seemed to show stability characteristics of typical aromatic systems, and it was quickly realized that this might be due to the fact that both I and II can be regarded as deri vatives of the tropylium ion, C7H7+, which Hiickel4 in 1931 had predicted to be aromatic, a prediction which has been fully confirmed.5 However although an enormous amount of experimental work has been carried out since then on the synthesis and properties of numerous tropone and tropolone derivatives, very few theoretical studies seem as yet to have been reported. -
Heterocyclic Compounds with Biological Meaning
Heterocyclic compounds with biological meaning 1 Heterocyclic compounds Cyclic, organic compounds which besides carbon atoms have one or more heteroatom (other elements than C). Heterocyclic atoms: – nitrogen, N – sulphur, S – oxygen, O – phosphorus, P – barium, Ba – zinc, Zn – silicon, Si. 2 Heterocyclic compounds From the biological point of view, the most important are heterocyclic compounds with 5- and 6-membered rings, containing: S, N, O. Most of the heterocyclic compounds have their common names. Substituent’s position in the ring is described by : – number – position of heteroatom – no. 1 – Greek letter – describes carbon atom the closest to heteroatom as a, then β and γ, respectively. 3 Heterocyclic compounds Heterocyclic compounds are: • widespread in nature • biologically active • some of them are toxic (e.g. coniine, coumarin and derivatives). Occurrence in: • natural dyes - heme, chlorophyll • alkaloids – atropine and nicotine • amino acids such as tryptophan and histidine • enzymes, nucleoproteins, antibiotics • vitamins • many synthetic pharmaceuticals. 4 Heterocyclic compounds Aromatic character of heteroatom-containing ring comes from aromatic sextet which consists of: • „not bound” electron pairs of heteroatoms • four electrons π from carbon atoms Pyrrole Furane Thiophen 5 5- membered ring heterocyclic compounds with one heteroatom 5-membered rings: • contain mostly oxygen, sulphur and nitrogen • are flat • are aromatic 6 5- membered ring heterocyclic compounds with two heteroatoms oxazole imidazole thiazole pyrazole 7 5- membered ring heterocyclic compounds With one heteroatom With two heteroatoms Condensation products with benzene 8 Pyrrole and derivatives • Pyrrole derivatives: • pyrroline • pyrrolidone • proline, • Hydroksyproline. • Condensation’s products of pyrrole with benzene: – indole, – tryptophan, – serotonin. • Condensation’s products of pyrrole with formaldehyde: – heme – hemoglobin – billirubin – porphyrins – Biliverdin. -
Heterocyclic Compounds
Gábor Krajsovszky Heterocyclic compounds ISBN: 978-615-5722-01-1 © Gábor Krajsovszky Responsible editor: Gábor Krajsovszky Publisher’s reader: István Mándity Translated by Péter Tétényi Department of Organic Chemistry Pharmaceutical Faculty Semmelweis University Budapest, 2018 Acknowledgements The editor wants to express many thanks to Dr. István Mándity, who is Associate Professor and Director of Department of Organic Chemistry, for the careful proofreading service of the current manuscript, as well as to Dr. Péter Tétényi, who is Assistant Professor, for the translation to English language. Moreover, the editor renders many thanks to Mrs. Ferenc Juhász and Ms. Nikoletta Zlatzky laboratory assistants for drawing material of the figures. Dr. Gábor Krajsovszky Associate Professor Department of Organic Chemistry Literature used Alan R. Katritzky, Charles W. Rees: Comprehensive Heterocyclic Chemistry Parts 2-3, 4-6, 7 Pergamon Press 1984 Oxford • New York • Toronto • Sydney • Paris • Frankfurt T. Eicher, S. Hauptmann, A. Speicher: The Chemistry of Heterocycles Structure, Reactions, Syntheses, and Applications Wiley-VCH GmbH 2003 Weinheim E. Breitmaier, G. Jung: Organische Chemie Grundlagen, Stoffklassen, Reaktionen, Konzepte, Molekülstruktur Georg Thieme Verlag 1978, 2005 Stuttgart • New York Clauder Ottó: Szerves kémia II/2. Egyetemi jegyzet Semmelweis OTE Budapest, 1980 Bruckner Győző: Szerves kémia III−1. Tankönyvkiadó, Budapest, 1964 Természettudományi Lexikon − Harmadik kötet Clauder Ottó: 'Heterociklusos vegyületek' címszó, 155-161. -
Heterocycles 2 Daniel Palleros
Heterocycles 2 Daniel Palleros Heterocycles 1. Structures 2. Aromaticity and Basicity 2.1 Pyrrole 2.2 Imidazole 2.3 Pyridine 2.4 Pyrimidine 2.5 Purine 3. Π-excessive and Π-deficient Heterocycles 4. Electrophilic Aromatic Substitution 5. Oxidation-Reduction 6. DNA and RNA Bases 7. Tautomers 8. H-bond Formation 9. Absorption of UV Radiation 10. Reactions and Mutations Heterocycles 3 Daniel Palleros Heterocycles Heterocycles are cyclic compounds in which one or more atoms of the ring are heteroatoms: O, N, S, P, etc. They are present in many biologically important molecules such as amino acids, nucleic acids and hormones. They are also indispensable components of pharmaceuticals and therapeutic drugs. Caffeine, sildenafil (the active ingredient in Viagra), acyclovir (an antiviral agent), clopidogrel (an antiplatelet agent) and nicotine, they all have heterocyclic systems. O CH3 N HN O O N O CH 3 N H3C N N HN N OH O S O H N N N 2 N O N N O CH3 N CH3 caffeine sildenafil acyclovir Cl S N CH3 N N H COOCH3 nicotine (S)-clopidogrel Here we will discuss the chemistry of this important group of compounds beginning with the simplest rings and continuing to more complex systems such as those present in nucleic acids. Heterocycles 4 Daniel Palleros 1. Structures Some of the most important heterocycles are shown below. Note that they have five or six-membered rings such as pyrrole and pyridine or polycyclic ring systems such as quinoline and purine. Imidazole, pyrimidine and purine play a very important role in the chemistry of nucleic acids and are highlighted. -
An Update on Natural Occurrence and Biological Activity of Benzofurans
Acta Scientific MEDICAL SCIENCES (ISSN: 2582-0931) Volume 4 Issue 10 October 2020 Review Article An Update on Natural Occurrence and Biological Activity of Benzofurans Kavita Khatana* and Anjali Gupta Received: June 28, 2020 Department of Chemistry, School of Basic and Applied Sciences, Galgotias Published: September 21, 2020 University, Greater Noida, UP, India © All rights are reserved by Kavita Khatana. *Corresponding Author: Kavita Khatana, Department of Chemistry, School of Basic and Applied Sciences, Galgotias University, Greater Noida, UP, India. Graphical Abstract Figure a Abstract Benzofuran and its derivatives are the major group amongst the natural collection of biologically active heterocyclic compounds. Their wide range of pharmacological activities and imaginable applications in medicinal and pharmaceutical chemistry have at- tracted various research scholars, medicinal chemists and pharmacologists. This review emphasizes the progress and development . ofKeywords: benzofuran Benzofuran; derivatives Antioxidant; in various biological Antiviral; activities Antimicrobial; with an Anticancer update of current research findings during a decade Introduction physiological and industrial world. In reference to pharmaceutical Heterocyclic ring systems have emerged as powerful scaf- industry, over 60% of the top retailing drugs contain at least one folds for many biological evaluations. Heterocyclic compounds heterocyclic motif as a part of overall topography of the compound. Benzofurans and its derivatives are important class of heterocyclic have significant role in medicinal and pharmacological chemistry, Citation: Kavita Khatana and Anjali Gupta. “An Update on Natural Occurrence and Biological Activity of Benzofurans”. Acta Scientific Medical Sciences 4.10 (2020): 114-123. An Update on Natural Occurrence and Biological Activity of Benzofurans 115 compounds, which are known to possess various biological proper- 3-(hydroxymethyl)-7-methoxy-2,3-dihydrobenzo furan-5-yl) ties. -
How Ingredients Influence Furan and Aroma Generation in Sponge Cake Mayela Cepeda-Vázquez, Barbara Rega, Nicolas Descharles, Valérie Camel
How ingredients influence furan and aroma generation in sponge cake Mayela Cepeda-Vázquez, Barbara Rega, Nicolas Descharles, Valérie Camel To cite this version: Mayela Cepeda-Vázquez, Barbara Rega, Nicolas Descharles, Valérie Camel. How ingredients influence furan and aroma generation in sponge cake. Food Chemistry, Elsevier, 2018, 245, pp.1025 - 1033. 10.1016/j.foodchem.2017.11.069. hal-01868629 HAL Id: hal-01868629 https://hal-agroparistech.archives-ouvertes.fr/hal-01868629 Submitted on 5 Oct 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. How ingredients influence furan and aroma generation in sponge cake AUTHORS Mayela Cepeda-Vázquez, Barbara Rega, Nicolas Descharles, Valérie Camel* UMR Ingénierie Procédés Aliments, AgroParisTech, Inra, Université Paris-Saclay, 91300 Massy, France * Corresponding author. AgroParisTech, 16 rue Claude Bernard, F-75231, Paris Cedex 05, France Tel. +33 (0) 1 44 08 17 25 email addresses: [email protected]; [email protected]; [email protected]; [email protected] * ABSTRACT A wide range of compounds can be formed during thermal processing of food, some of which are relevant for aroma (e.g. furfural), while others are of great health-concern (e.g. -
Construction of Unusual Indole-Based Heterocycles from Tetrahydro-1H-Pyridazino[3,4-B]Indoles
molecules Article Construction of Unusual Indole-Based Heterocycles from Tetrahydro-1H-pyridazino[3,4-b]indoles Cecilia Ciccolini, Lucia De Crescentini, Fabio Mantellini, Giacomo Mari, Stefania Santeusanio and Gianfranco Favi * Department of Biomolecular Sciences, Section of Chemistry and Pharmaceutical Technologies, University of Urbino “Carlo Bo”, Via I Maggetti 24, 61029 Urbino, Italy; [email protected] (C.C.); [email protected] (L.D.C.); [email protected] (F.M.); [email protected] (G.M.); [email protected] (S.S.) * Correspondence: [email protected]; Tel.: +39-0722-303444 Academic Editor: Pascale Moreau Received: 27 August 2020; Accepted: 7 September 2020; Published: 9 September 2020 Abstract: Herein, we report the successful syntheses of scarcely represented indole-based heterocycles which have a structural connection with biologically active natural-like molecules. The selective oxidation of indoline nucleus to indole, hydrolysis of ester and carbamoyl residues followed by decarboxylation with concomitant aromatization of the pyridazine ring starting from tetrahydro-1H-pyridazino[3,4-b]indole derivatives lead to fused indole-pyridazine compounds. On the other hand, non-fused indole-pyrazol-5-one scaffolds are easily prepared by subjecting the same C2,C3-fused indoline tetrahydropyridazines to treatment with trifluoroacetic acid (TFA). These methods feature mild conditions, easy operation, high yields in most cases avoiding the chromatographic purification, and broad substrate scope. Interestingly, the formation of indole linked pyrazol-5-one system serves as a good example of the application of the umpolung strategy in the synthesis of C3-alkylated indoles. Keywords: indole-based heterocycles; C2-C3 indole oxidation; aromatization; ring-opening/ring-closing; umpolung 1. -
Substituent Effect on the Aromaticity of 1,3-Azole Systems
Heterocycl. Commun., Vol. 18(1), pp. 11–16, 2012 • Copyright © by Walter de Gruyter • Berlin • Boston. DOI 10.1515/hc-2011-0050 Substituent effect on the aromaticity of 1,3-azole systems Sel ç uk G ü m ü s¸ 1, * and Lemi T ü rker 2 shift (NICS) (Schleyer et al. , 1996 ), which is the computed 1 Department of Chemistry , Faculty of Sciences, value of the negative magnetic shielding at some selected Yuzuncu Yil University, 65080, Kamp ü s, Van , Turkey points in space, generally, in a ring or a cage center. Negative 2 Department of Chemistry , Faculty of Arts and Sciences, NICS values denote aromaticity (-11.5 for benzene, -11.4 for Middle East Technical University, 06531, Ankara , Turkey naphthalene) and positive NICS values denote antiaromaticity (28.8 for cyclobutadiene), whereas small NICS values indi- * Corresponding author cate non-aromaticity (-3.1 for 1,3-cyclopentadiene). NICS e-mail: [email protected] may be a useful indicator of aromaticity that usually corre- lates well with the other energetic, structural and magnetic criteria for aromaticity (Jiao and Schleyer , 1998 ; Schleyer Abstract et al. , 2000 ; Patchkovskii and Thiel , 2002 ; Quinonero et al. , 2002 ). Resonance energies and magnetic susceptibilities are The effects of substituent type and position on the aromaticity measures of the overall aromaticity of a polycyclic molecule, of certain derivatives of oxazole, imidazole and thiazole have but do not provide information about the individual rings. been theoretically investigated by using density functional However, NICS is an effective probe for local aromaticity of theory at the levels of B3LYP/6-31G(d,p) and B3LYP/6- individual rings of polycyclic systems. -
Tetrazinebox: a Structurally Transformative Toolbox Qing-Hui Guo, Jiawang Zhou, Haochuan Mao, Yunyan Qiu, Minh T
pubs.acs.org/JACS Article TetrazineBox: A Structurally Transformative Toolbox Qing-Hui Guo, Jiawang Zhou, Haochuan Mao, Yunyan Qiu, Minh T. Nguyen, Yuanning Feng, Jiaqi Liang, Dengke Shen, Penghao Li, Zhichang Liu, Michael R. Wasielewski, and J. Fraser Stoddart* Cite This: J. Am. Chem. Soc. 2020, 142, 5419−5428 Read Online ACCESS Metrics & More Article Recommendations *sı Supporting Information ABSTRACT: Synthetic macrocycles capable of undergoing allosteric regulation by responding to versatile external stimuli are the subject of increasing attention in supramolecular science. Herein, we report a structurally transformative tetracationic cyclophane containing two 3,6-bis(4-pyridyl)-l,2,4,5-tetrazine (4-bptz) units, which are linked together by two p-xylylene bridges. The cyclophane, which possesses modular redox states and structural post-modifications, can undergo two reversibly consecutive two-electron reductions, affording first its bisradical dicationic counterpart, and then subsequently the fully reduced species. Furthermore, one single-parent cyclophane can afford effectively three other new analogs through box- to-box cascade transformations, taking advantage of either reductions or an inverse electron-demand Diels−Alder (IEDDA) reaction. While all four new tetracationic cyclophanes adopt rigid and symmetric box-like conformations, their geometries in relation to size, shape, electronic properties, and binding affinities toward polycyclic aromatic hydrocarbons can be readily regulated. This structurally transformative tetracationic cyclophane performs a variety of new tasks as a result of structural post-modifications, thus serving as a toolbox for probing the radical properties and generating rapidly a range of structurally diverse cyclophanes by efficient divergent syntheses. This research lays a solid foundation for the introduction of the structurally transformative tetracationic cyclophane into the realm of mechanically interlocked molecules and will provide a toolbox to construct and operate intelligent molecular machines.