Phytotoxins Produced by Fungi Associated with Grapevine Trunk Diseases
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Botryosphaeria Infections in New Zealand Grapevine Nurseries: Sources of Inoculum and Infection Pathways
Lincoln University Digital Thesis Copyright Statement The digital copy of this thesis is protected by the Copyright Act 1994 (New Zealand). This thesis may be consulted by you, provided you comply with the provisions of the Act and the following conditions of use: you will use the copy only for the purposes of research or private study you will recognise the author's right to be identified as the author of the thesis and due acknowledgement will be made to the author where appropriate you will obtain the author's permission before publishing any material from the thesis. Botryosphaeria infections in New Zealand grapevine nurseries: Sources of inoculum and infection pathways A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy in Plant Pathology by Regina Billones-Baaijens Lincoln University 2011 Abstract of a thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy in Plant Pathology Abstract Botryosphaeria infections in New Zealand grapevine nurseries: Inoculum sources and infection pathways by Regina Billones-Baaijens The botryosphaeriaceous fungi can cause decline, dieback and death of grapevines. Anecdotal evidence has indicated that these pathogens might be present in the young vines sold by propagation nurseries, so this study investigated their role in spread of this disease. Sampling of grapevine nurseries across New Zealand showed that botryosphaeriaceous infections were present in eight out of nine nurseries with infection incidence ranging from 5 to 63%. Of the 311 propagation materials and plants received, 23% were positive for botryosphaeriaceous infection, with a total of 120 isolates recovered. -
New Ascomycetes Associated with Grapevine Dieback in Algeria
Jordan Journal of Agricultural Sciences, Volume 11, No.2 2015 New Ascomycetes Associated with Grapevine Dieback in Algeria Faiza Ammad1,2, Messaoud Benchabane2 and Mohamed Toumi1 ABSTRACT This study was conducted during spring 2012 to detect the causal organism (s) responsible for a new grapevine dieback disease in Algeria. Samples of grapevine wood were collected from 10 grapevine fields located in two regions (Medea and Tipaza). Several fungi were isolated from the margin between healthy and diseased tissues. Botryosphaeria spp, were identified based on the morphological characteristics of the culture and confirmed by Beta tubulin (ß-tubulin) region. The sequences submitted to the GenBank (NCBI) under accession numbers (KC960991)( HQ660477)( AY236931), revealed 99-100% homology. Other fungal species Entoleuca mammata and Rosellinia merrilli. were also isolated at low frequency. Inoculation In vitro of grapevine plantlets, with the two Botryosphaeriaceae species, produced smallest necrosis after five-week incubation; Botryosphaeria obtsusa (Diplodia seriata) were virulent compared with B. dothidea. The species tested were re-isolated from necrosis symptoms on infected plantlets . Keywords: Algeria, grapevine dieback, Phylogenetic analysis, Pathogenicity test. INTRODUCTION Eutypa. lata, and longitudinal brown streakings along the affected tissues (Castillo-Pando et al., 2001; Taylor et al., Black dead arm (BDA) is a frequent trunk disease of 2005). BDA foliar symptoms reported by Larignon and grapevine occurring in vineyards all over the world that Dubos (2001), include an early red or yellow-orange patchy leads to a slow decline and the death of the plant. However, discoloration of the leaves (in red- and white-berried grape it is the cause of fatal decline in vine producing countries. -
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
<I>Botryosphaeriales</I>
Persoonia 33, 2014: 155–168 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X684780 Confronting the constraints of morphological taxonomy in the Botryosphaeriales B. Slippers1, J. Roux2, M.J. Wingfield1, F.J.J. van der Walt2, F. Jami2, J.W.M. Mehl2, G.J. Marais3 Key words Abstract Identification of fungi and the International Code of Nomenclature underpinning this process, rests strongly on the characterisation of morphological structures. Yet, the value of these characters to define species in Botryosphaeriales many groups has become questionable or even superfluous. This has emerged as DNA-based techniques have morphotaxa increasingly revealed cryptic species and species complexes. This problem is vividly illustrated in the present phylogeny study where 105 isolates of the Botryosphaeriales were recovered from both healthy and diseased woody tissues taxonomy of native Acacia spp. in Namibia and South Africa. Thirteen phylogenetically distinct groups were identified based tree health on Internal Transcribed Spacer (ITS) rDNA PCR-RFLP and translation elongation factor 1-α (TEF1-α) sequence data, two loci that are known to be reliable markers to distinguish species in the Botryosphaeriales. Four of these groups could be linked reliably to sequence data for formerly described species, including Botryosphaeria dothidea, Dothiorella dulcispinae, Lasiodiplodia pseudotheobromae and Spencermartinsia viticola. Nine groups, however, could not be linked to any other species known from culture and for which sequence data are available. These groups are, therefore, described as Aplosporella africana, A. papillata, Botryosphaeria auasmontanum, Dothiorella capri-amissi, Do. oblonga, Lasiodiplodia pyriformis, Spencermartinsia rosulata, Sphaeropsis variabilis and an un- described Neofusicoccum sp. -
A Survey of Trunk Disease Pathogens Within Citrus Trees in Iran
plants Article A Survey of Trunk Disease Pathogens within Citrus Trees in Iran Nahid Espargham 1, Hamid Mohammadi 1,* and David Gramaje 2,* 1 Department of Plant Protection, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman 7616914111, Iran; [email protected] 2 Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas, Universidad de la Rioja, Gobierno de La Rioja, 26007 Logroño, Spain * Correspondence: [email protected] (H.M.); [email protected] (D.G.); Tel.: +98-34-3132-2682 (H.M.); +34-94-1899-4980 (D.G.) Received: 4 May 2020; Accepted: 12 June 2020; Published: 16 June 2020 Abstract: Citrus trees with cankers and dieback symptoms were observed in Bushehr (Bushehr province, Iran). Isolations were made from diseased cankers and branches. Recovered fungal isolates were identified using cultural and morphological characteristics, as well as comparisons of DNA sequence data of the nuclear ribosomal DNA-internal transcribed spacer region, translation elongation factor 1α, β-tubulin, and actin gene regions. Dothiorella viticola, Lasiodiplodia theobromae, Neoscytalidium hyalinum, Phaeoacremonium (P.) parasiticum, P. italicum, P. iranianum, P. rubrigenum, P. minimum, P. croatiense, P. fraxinopensylvanicum, Phaeoacremonium sp., Cadophora luteo-olivacea, Biscogniauxia (B.) mediterranea, Colletotrichum gloeosporioides, C. boninense, Peyronellaea (Pa.) pinodella, Stilbocrea (S.) walteri, and several isolates of Phoma, Pestalotiopsis, and Fusarium species were obtained from diseased trees. The pathogenicity tests were conducted by artificial inoculation of excised shoots of healthy acid lime trees (Citrus aurantifolia) under controlled conditions. Lasiodiplodia theobromae was the most virulent and caused the longest lesions within 40 days of inoculation. According to literature reviews, this is the first report of L. -
Three Species of Neofusicoccum (Botryosphaeriaceae, Botryosphaeriales) Associated with Woody Plants from Southern China
Mycosphere 8(2): 797–808 (2017) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/8/2/4 Copyright © Guizhou Academy of Agricultural Sciences Three species of Neofusicoccum (Botryosphaeriaceae, Botryosphaeriales) associated with woody plants from southern China Zhang M1,2, Lin S1,2, He W2, * and Zhang Y1, * 1Institute of Microbiology, P.O. Box 61, Beijing Forestry University, Beijing 100083, PR China. 2Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing 100083, PR China. Zhang M, Lin S, He W, Zhang Y 2017 – Three species of Neofusicoccum (Botryosphaeriaceae, Botryosphaeriales) associated with woody plants from Southern China. Mycosphere 8(2), 797–808, Doi 10.5943/mycosphere/8/2/4 Abstract Two new species, namely N. sinense and N. illicii, collected from Guizhou and Guangxi provinces in China, are described and illustrated. Phylogenetic analysis based on combined ITS, tef1-α and TUB loci supported their separation from other reported species of Neofusicoccum. Morphologically, the relatively large conidia of N. illicii, which become 1–3-septate and pale yellow when aged, can be distinguishable from all other reported species of Neofusicoccum. Phylogenetically, N. sinense is closely related to N. brasiliense, N. grevilleae and N. kwambonambiense. The smaller conidia of N. sinense, which have lower L/W ratio and become 1– 2-septate when aged, differ from the other three species. Neofusicoccum mangiferae was isolated from the dieback symptoms of mango in Guangdong Province. Key words – Asia – endophytes – Morphology– Taxonomy Introduction Neofusicoccum Crous, Slippers & A.J.L. Phillips was introduced by Crous et al. (2006) for species that are morphologically similar to, but phylogenetically distinct from Botryosphaeria species, which are commonly associated with numerous woody hosts world-wide (Arx 1987, Phillips et al. -
Apple Fruit Diseases Appearing at Harvest by John Hartman
University of Kentucky College of Agriculture, Food & Environment Extension Plant Pathology College of Agriculture, Food and Environment Cooperative Extension Service Plant Pathology Fact Sheet PPFS-FR-T-02 Fruit Diseases of Apple Nicole W. Gauthier Extension Plant Pathologist Importance Primary Fruit Rots Apple fruit diseases can cause significant losses in Bitter Rot (Colletotrichum acutatum complex, yield and quality. Often, these diseases go unnoticed C. gloeosporioides complex) until just prior to harvest, during harvest, or after Bitter rot infections produce sunken, circular brown fruit has been stored. Although there are no curative spots (Figure 1) that may be surrounded by a red halo. treatments for infected fruit, many diseases can be As lesions expand, spores (conidia) or spore-bearing prevented with cultural practices and (optional) structures (acervuli) appear in concentric circles fungicides. Accurate diagnosis, however, is critical (Figures 1 & 2). The most common forms of bitter to determine the best management practices and to rot (caused by species in the C. acutatum complex) prevent future losses. develop exuding spore masses that may take on a slight orange or pink color. Fruit decay extends from Following is an overview of the various fruit diseases the outer skin into the flesh to form a cone-shaped that occur on apple in Kentucky. Bitter rot, black rot, rot (Figure 3). Infections can occur as early as bloom and white rot cause the most serious damage, while or petal fall, but symptom development may be other diseases, such as apple scab, cedar-quince delayed until later in the season. In Kentucky, bitter rust, powdery mildew, and sooty blotch/flyspeck, are rot symptoms can occur as early as mid-June and as less frequent and less damaging. -
Botryosphaeria-Related Dieback and Control Investigated in Noncoastal California Grapevines
RESEARCH ARTICLE ▼ Botryosphaeria-related dieback and control investigated in noncoastal California grapevines by Lynn Epstein, Sukhwinder Kaur and Jean S. VanderGheynst Dieback, or “dead arm,” in noncoastal runk and cordon cankers that cause the ribosomal DNA (called ITS), was California grapevines is most com- vine dieback are serious economic routinely isolated from the margins of monly caused by Botryosphaeria spp. problemsT in vines 12 years and older. cankers in woody tissue in all parts of Using Koch’s postulates, we demon- Vines are infected, at least primarily, the vines. B. dothidea, B. stevensii and through pruning wounds. Historically, E. lata were also occasionally isolated. strated that isolates of B. obtusa are dieback in California vineyards was at- Except for a loss of vigor in shoots pathogenic on grapevines. We initi- tributed to the fungus Eutypa lata, but adjacent to cankered regions, the vines ated studies to investigate the life cy- many of the vines, particularly in the were relatively free of foliar symptoms. cle of B. obtusa and ways to control it Sacramento and San Joaquin valleys, Nonetheless, in springtime some vines are actually infected by fungi in the with multiple dead spurs had de- with cultural practices. Fungal spores genus Botryosphaeria (Urbez-Torres et al. formed, chlorotic (yellow) leaves consis- disseminated by rainstorms were 2006); cankers caused by Botryosphaeria tent with symptoms of Eutypa dieback. collected in traps in an Arbuckle vine- spp. are called “Bot canker.” In all 21 vines with foliar symptoms sampled, only B. obtusa was isolated yard from December 2006 through Signs of disease on grapevines from the margins of discolored woody spring 2007. -
Beta-Tubulin and Actin Gene Phylogeny Supports
A peer-reviewed open-access journal MycoKeys 41: 1–15 (2018) Beta-tubulin and Actin gene phylogeny supports... 1 doi: 10.3897/mycokeys.41.27536 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Beta-tubulin and Actin gene phylogeny supports Phaeoacremonium ovale as a new species from freshwater habitats in China Shi-Ke Huang1,2,3,7, Rajesh Jeewon4, Kevin D. Hyde2, D. Jayarama Bhat5,6, Putarak Chomnunti2,7, Ting-Chi Wen1 1 Engineering and Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang 550025, China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3 Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, Chi- na 4 Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius 5 Azad Housing Society, No. 128/1-J, Curca, P.O. Goa Velha 403108, India 6 Formerly, Department of Botany, Goa University, Goa, 403206, India 7 School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand Corresponding author: Ting-Chi Wen ([email protected]) Academic editor: Marc Stadler | Received 15 June 2018 | Accepted 10 September 2018 | Published 11 October 2018 Citation: Huang S-K, Jeewon R, Hyde KD, Bhat DJ, Chomnunti P, Wen T-C (2018) Beta-tubulin and Actin gene phylogeny supports Phaeoacremonium ovale as a new species from freshwater habitats in China. MycoKeys 41: 1–15. https://doi.org/10.3897/mycokeys.41.27536 Abstract A new species of Phaeoacremonium, P. -
Botryosphaeriaceae Species Overlap on Four Unrelated, Native South African Hosts
Botryosphaeriaceae species overlap on four unrelated, native South African hosts Fahimeh JAMI1*, Bernard SLIPPERS2, Michael J. WINGFIELD1, Marieka GRYZENHOUT3 1 Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa 2Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa 3Department of Plant Sciences, University of the Free State, Bloemfontein, South Africa, * Corresponding author. Tel.: +27124205819; Fax:0027 124203960. E-mail address: [email protected] ABSTRACT The Botryosphaeriaceae represents an important and diverse family of latent fungal pathogens of woody plants. While some species appear to have wide host ranges, others are reported only from single hosts. It is, however, not clear whether apparently narrow host ranges reflect specificity or if this is an artifact of sampling. We address this question by sampling leaves and branches of native South African trees from four different families, including Acacia karroo (Fabaceae), Celtis africana (Cannabaceae), Searsia lancea (Anacardiaceae) and Gymnosporia buxifolia (Celastraceae). As part of this process, two new species of the Botryosphaeriaceae, namely Tiarosporella africana sp. nov. and Aplosporella javeedii sp. nov., emerged from sequence comparisons based on the ITS rDNA, TEF-1α, β-tubulin and LSU rDNA gene regions. An additional five known species were identified including Neofusicoccum parvum, N. kwambonambiense, Spencermartinsia viticola, Diplodia pseudoseriata and Botryosphaeria dothidea. Despite extensive sampling of the trees, some of these species were not isolated on many of the hosts as was expected. For example, B. dothidea, which is known to have a broad host range but was found only on A. -
Grapevine Botryosphaeria Dieback Fungi Have Specific Aggressiveness
Grapevine Botryosphaeria dieback fungi have specific aggressiveness factor repertory involved in wood decay and stilbene metabolization Elodie Stempien, Mary-Lorène Goddard, Kim Wilhelm, Céline Tarnus, Christophe Bertsch, Julie Chong To cite this version: Elodie Stempien, Mary-Lorène Goddard, Kim Wilhelm, Céline Tarnus, Christophe Bertsch, et al.. Grapevine Botryosphaeria dieback fungi have specific aggressiveness factor repertory involved in wood decay and stilbene metabolization. PLoS ONE, Public Library of Science, 2017, 12 (12), pp.e0188766. 10.1371/journal.pone.0188766. hal-02106555 HAL Id: hal-02106555 https://hal.archives-ouvertes.fr/hal-02106555 Submitted on 23 Apr 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. RESEARCH ARTICLE Grapevine Botryosphaeria dieback fungi have specific aggressiveness factor repertory involved in wood decay and stilbene metabolization Elodie Stempien1☯, Mary-Lorène Goddard1,2☯, Kim Wilhelm1,2, CeÂline Tarnus2, Christophe Bertsch1, Julie Chong1* a1111111111 1 Universite de Haute-Alsace, Laboratoire Vigne, Biotechnologies et Environnement, Colmar, France, 2 Universite de Haute-Alsace, Laboratoire de Chimie Organique et Bioorganique, Mulhouse, France a1111111111 a1111111111 ☯ These authors contributed equally to this work. a1111111111 * [email protected] a1111111111 Abstract Grapevine trunk diseases: Eutypa dieback, esca and Botryosphaeria dieback, which inci- OPEN ACCESS dence has increased recently, are associated with several symptoms finally leading to the Citation: Stempien E, Goddard M-L, Wilhelm K, plant death. -
What If Esca Disease of Grapevine Were Not a Fungal Disease?
Fungal Diversity (2012) 54:51–67 DOI 10.1007/s13225-012-0171-z What if esca disease of grapevine were not a fungal disease? Valérie Hofstetter & Bart Buyck & Daniel Croll & Olivier Viret & Arnaud Couloux & Katia Gindro Received: 20 March 2012 /Accepted: 1 April 2012 /Published online: 24 April 2012 # The Author(s) 2012. This article is published with open access at Springerlink.com Abstract Esca disease, which attacks the wood of grape- healthy and diseased adult plants and presumed esca patho- vine, has become increasingly devastating during the past gens were widespread and occurred in similar frequencies in three decades and represents today a major concern in all both plant types. Pioneer esca-associated fungi are not trans- wine-producing countries. This disease is attributed to a mitted from adult to nursery plants through the grafting group of systematically diverse fungi that are considered process. Consequently the presumed esca-associated fungal to be latent pathogens, however, this has not been conclu- pathogens are most likely saprobes decaying already senes- sively established. This study presents the first in-depth cent or dead wood resulting from intensive pruning, frost or comparison between the mycota of healthy and diseased other mecanical injuries as grafting. The cause of esca plants taken from the same vineyard to determine which disease therefore remains elusive and requires well execu- fungi become invasive when foliar symptoms of esca ap- tive scientific study. These results question the assumed pear. An unprecedented high fungal diversity, 158 species, pathogenicity of fungi in other diseases of plants or animals is here reported exclusively from grapevine wood in a single where identical mycota are retrieved from both diseased and Swiss vineyard plot.