Ultrastructure of Selenidium Pendula, the Type Species Of
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An Aerobic Eukaryotic Parasite with Functional Mitochondria That Likely
An aerobic eukaryotic parasite with functional mitochondria that likely lacks a mitochondrial genome Uwe John, Yameng Lu, Sylke Wohlrab, Marco Groth, Jan Janouškovec, Gurjeet Kohli, Felix Mark, Ulf Bickmeyer, Sarah Farhat, Marius Felder, et al. To cite this version: Uwe John, Yameng Lu, Sylke Wohlrab, Marco Groth, Jan Janouškovec, et al.. An aerobic eukaryotic parasite with functional mitochondria that likely lacks a mitochondrial genome. Science Advances , American Association for the Advancement of Science (AAAS), 2019, 5 (4), pp.eaav1110. 10.1126/sci- adv.aav1110. hal-02372304 HAL Id: hal-02372304 https://hal.archives-ouvertes.fr/hal-02372304 Submitted on 25 Nov 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. SCIENCE ADVANCES | RESEARCH ARTICLE EVOLUTIONARY BIOLOGY Copyright © 2019 The Authors, some rights reserved; An aerobic eukaryotic parasite with functional exclusive licensee American Association mitochondria that likely lacks a mitochondrial genome for the Advancement Uwe John1,2*, Yameng Lu1,3, Sylke Wohlrab1,2, Marco Groth4, Jan Janouškovec5, Gurjeet S. Kohli1,6, of Science. No claim to 1 1 7 4 1,8 original U.S. Government Felix C. Mark , Ulf Bickmeyer , Sarah Farhat , Marius Felder , Stephan Frickenhaus , Works. -
Basal Body Structure and Composition in the Apicomplexans Toxoplasma and Plasmodium Maria E
Francia et al. Cilia (2016) 5:3 DOI 10.1186/s13630-016-0025-5 Cilia REVIEW Open Access Basal body structure and composition in the apicomplexans Toxoplasma and Plasmodium Maria E. Francia1* , Jean‑Francois Dubremetz2 and Naomi S. Morrissette3 Abstract The phylum Apicomplexa encompasses numerous important human and animal disease-causing parasites, includ‑ ing the Plasmodium species, and Toxoplasma gondii, causative agents of malaria and toxoplasmosis, respectively. Apicomplexans proliferate by asexual replication and can also undergo sexual recombination. Most life cycle stages of the parasite lack flagella; these structures only appear on male gametes. Although male gametes (microgametes) assemble a typical 9 2 axoneme, the structure of the templating basal body is poorly defined. Moreover, the rela‑ tionship between asexual+ stage centrioles and microgamete basal bodies remains unclear. While asexual stages of Plasmodium lack defined centriole structures, the asexual stages of Toxoplasma and closely related coccidian api‑ complexans contain centrioles that consist of nine singlet microtubules and a central tubule. There are relatively few ultra-structural images of Toxoplasma microgametes, which only develop in cat intestinal epithelium. Only a subset of these include sections through the basal body: to date, none have unambiguously captured organization of the basal body structure. Moreover, it is unclear whether this basal body is derived from pre-existing asexual stage centrioles or is synthesized de novo. Basal bodies in Plasmodium microgametes are thought to be synthesized de novo, and their assembly remains ill-defined. Apicomplexan genomes harbor genes encoding δ- and ε-tubulin homologs, potentially enabling these parasites to assemble a typical triplet basal body structure. -
Molecular Data and the Evolutionary History of Dinoflagellates by Juan Fernando Saldarriaga Echavarria Diplom, Ruprecht-Karls-Un
Molecular data and the evolutionary history of dinoflagellates by Juan Fernando Saldarriaga Echavarria Diplom, Ruprecht-Karls-Universitat Heidelberg, 1993 A THESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE STUDIES Department of Botany We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA November 2003 © Juan Fernando Saldarriaga Echavarria, 2003 ABSTRACT New sequences of ribosomal and protein genes were combined with available morphological and paleontological data to produce a phylogenetic framework for dinoflagellates. The evolutionary history of some of the major morphological features of the group was then investigated in the light of that framework. Phylogenetic trees of dinoflagellates based on the small subunit ribosomal RNA gene (SSU) are generally poorly resolved but include many well- supported clades, and while combined analyses of SSU and LSU (large subunit ribosomal RNA) improve the support for several nodes, they are still generally unsatisfactory. Protein-gene based trees lack the degree of species representation necessary for meaningful in-group phylogenetic analyses, but do provide important insights to the phylogenetic position of dinoflagellates as a whole and on the identity of their close relatives. Molecular data agree with paleontology in suggesting an early evolutionary radiation of the group, but whereas paleontological data include only taxa with fossilizable cysts, the new data examined here establish that this radiation event included all dinokaryotic lineages, including athecate forms. Plastids were lost and replaced many times in dinoflagellates, a situation entirely unique for this group. Histones could well have been lost earlier in the lineage than previously assumed. -
Implications of Habitat Restoration for Bumble Bee Population Dynamics, Foraging Ecology, and Epidemiology
IMPLICATIONS OF HABITAT RESTORATION FOR BUMBLE BEE POPULATION DYNAMICS, FORAGING ECOLOGY, AND EPIDEMIOLOGY By Knute Baldwin Gundersen A DISSERTATION Submitted to Michigan State University in partial fulfillment of the requirements for the degree of Entomology—Doctor of Philosophy Ecology, Evolutionary Biology and Behavior—Dual Major 2018 ABSTRACT IMPLICATIONS OF HABITAT RESTORATION FOR BUMBLE BEE POPULATION DYNAMICS, FORAGING ECOLOGY, AND EPIDEMIOLOGY By Knute Baldwin Gundersen Many insects provide valuable ecosystem services, including those that support our food supply. Beneficial insects such as pollinators fulfill part of this role by contributing to approximately one third of the global food crop production. Over the past few decades, pollinators have faced declining populations due to a variety of factors such as agricultural intensification, lack of floral and nesting resources, and disease. One method used in agricultural settings to help sustain pollinator populations is designating unfarmed habitat such as ditches and field margins for habitat enhancement in the form of hedgerows and wildflower strips. These floristically rich areas can be tailored to bloom both before and after crop bloom to help sustain pollinators during the time when crops are not in bloom. In turn, bee populations can benefit from the consistent availability of resources in these areas of habitat enhancement. This dissertation explores how habitat enhancement affects nesting density of a common wild pollinator, Bombus impatiens . Further, this research also aims to determine how foraging preferences change and how bumble bee disease transmission and prevalence respond to habitat enhancement. Research was conducted at 15 commercial highbush blueberry ( Vaccinium corymbosum ) fields in southwest Michigan containing either no restoration, a newly planted restoration, or a mature (5-8 year old) restoration in the field margin from 2015 to 2017. -
Parasitism of Photosynthetic Dinoflagellates in a Shallow Subestuary of Chesapeake Bay, USA
- AQUATIC MICROBIAL ECOLOGY Vol. 11: 1-9, 1996 Published August 29 Aquat Microb Ecol Parasitism of photosynthetic dinoflagellates in a shallow subestuary of Chesapeake Bay, USA D. W. Coats*,E. J. Adam, C. L. Gallegos, S. Hedrick Smithsonian Environmental Research Center, PO Box 28, Edgewater, Maryland 21037, USA ABSTRACT- Rhode Rlver (USA)populatlons of the red-tlde d~noflagellatesGyrnnodinium sanguineum Hlrasaka, 1922, Cyi-odinium uncatenum Hulburt, 1957, and Scnppsiella trochoidea (Steln) Loeblich 111, 1976, were commonly infected by thelr parasltlc relative Amoebophrya cei-atil Cachon, 1964, dunng the summer of 1992. Mean ~nfectionlevels were relatively low, wlth data for vertically Integrated sam- ples averaging 1.0, 1.9, and 6 5% for G. sangujneum, G. uncatenum, and S, trocho~dea,respectively However, epldemlc outbreaks of A. ceratii (20 to 80% hosts parasitized) occurred in G. uncatenum and S. trochoidea on several occasions, wlth peak levels of parasitism associated wlth decreases ~n host abundance. Estimates for paraslte Induced mortality indlcate that A, ceratil 1s capable of removlng a significant fraction of dinoflagellate blomass, with epldemics In the upper estuary cropplng up to 54% of the dominant bloom-forming species, G uncatenum, dally. However, epldemics were usually geo- graphically restncted and of short duration, with dally losses for the 3 host species due to parasitism averaging 1 to 3 % over the summer. Thus, A ceratli appears capable of exerting a controlling Influence on bloonl-form~ngdinoflagellates of the Rhode River only when conditions are suitable for production of epidemlc infections. Interestingly, epidemics falled to occur in multlple d~noflagellatetaxa sunulta- neously, even when alternate host specles were present at hlgh densities. -
University of Oklahoma
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D. -
An Intestinal Gregarine of Nothria Conchylega (Polychaeta, Onuphidae)
Journal of Invertebrate Pathology 104 (2010) 172–179 Contents lists available at ScienceDirect Journal of Invertebrate Pathology journal homepage: www.elsevier.com/locate/jip Description of Trichotokara nothriae n. gen. et sp. (Apicomplexa, Lecudinidae) – An intestinal gregarine of Nothria conchylega (Polychaeta, Onuphidae) Sonja Rueckert *, Brian S. Leander Canadian Institute for Advanced Research, Program in Integrated Microbial Biodiversity, Departments of Botany and Zoology, University of British Columbia, #3529 – 6270 University Blvd., Vancouver, BC, Canada V6T 1Z4 article info abstract Article history: The trophozoites of a novel gregarine apicomplexan, Trichotokara nothriae n. gen. et sp., were isolated and Received 12 November 2009 characterized from the intestines of the onuphid tubeworm Nothria conchylega (Polychaeta), collected at Accepted 11 March 2010 20 m depth from the North-eastern Pacific Coast. The trophozoites were 50–155 lm long with a mid-cell Available online 23 March 2010 indentation that formed two prominent bulges (anterior bulge, 14–48 lm wide; posterior bulge, 15– 55 lm wide). Scanning electron microscopy (SEM) demonstrated that approximately 400 densely packed, Keywords: longitudinal epicytic folds (5 folds/lm) inscribe the surface of the trophozoites, and a prominently elon- Alveolata gated mucron (14–60 lm long and 6–12 lm wide) was covered with hair-like projections (mean length, Apicomplexa 1.97 m; mean width, 0.2 m at the base). Although a septum occurred at the junction between the cell Lecudinidae l l Lecudina proper and the mucron in most trophozoites, light microscopy (LM) demonstrated that the cell proper Parasite extended into the core of the mucron as a thin prolongation. -
Evidence for and Against Deformed Wing Virus Spillover from Honey Bees to Bumble Bees: a Reverse Genetic Analysis Olesya N
www.nature.com/scientificreports OPEN Evidence for and against deformed wing virus spillover from honey bees to bumble bees: a reverse genetic analysis Olesya N. Gusachenko1*, Luke Woodford1, Katharin Balbirnie‑Cumming1, Eugene V. Ryabov2 & David J. Evans1* Deformed wing virus (DWV) is a persistent pathogen of European honey bees and the major contributor to overwintering colony losses. The prevalence of DWV in honey bees has led to signifcant concerns about spillover of the virus to other pollinating species. Bumble bees are both a major group of wild and commercially‑reared pollinators. Several studies have reported pathogen spillover of DWV from honey bees to bumble bees, but evidence of a sustained viral infection characterized by virus replication and accumulation has yet to be demonstrated. Here we investigate the infectivity and transmission of DWV in bumble bees using the buf-tailed bumble bee Bombus terrestris as a model. We apply a reverse genetics approach combined with controlled laboratory conditions to detect and monitor DWV infection. A novel reverse genetics system for three representative DWV variants, including the two master variants of DWV—type A and B—was used. Our results directly confrm DWV replication in bumble bees but also demonstrate striking resistance to infection by certain transmission routes. Bumble bees may support DWV replication but it is not clear how infection could occur under natural environmental conditions. Deformed wing virus (DWV) is a widely established pathogen of the European honey bee, Apis mellifera. In synergistic action with its vector—the parasitic mite Varroa destructor—it has had a devastating impact on the health of honey bee colonies globally1,2. -
Supplementary Figure 1 Multicenter Randomised Control Trial 2746 Randomised
Supplementary Figure 1 Multicenter randomised control trial 2746 randomised 947 control 910 MNP without zinc 889 MNP with zinc 223 lost to follow up 219 lost to follow up 183 lost to follow up 34 refused 29 refused 37 refused 16 died 12 died 9 died 3 excluded 4 excluded 1 excluded 671 in follow-up 646 in follow-up 659 in follow-up at 24mo of age at 24mo of age at 24mo of age Selection for Microbiome sequencing 516 paired samples unavailable 469 paired samples unavailable 497 paired samples unavailable 69 antibiotic use 63 antibiotic use 67 antibiotic use 31 outside of WLZ criteria 37 outside of WLZ criteria 34 outside of WLZ criteria 6 diarrhea last 7 days 2 diarrhea last 7 days 7 diarrhea last 7 days 39 WLZ > -1 at 24 mo 10 WLZ < -2 at 24mo 58 WLZ > -1 at 24 mo 17 WLZ < -2 at 24mo 48 WLZ > -1 at 24 mo 8 WLZ < -2 at 24mo available for selection available for selection available for selection available for selection available for selection1 available for selection1 14 selected 10 selected 15 selected 14 selected 20 selected1 7 selected1 1 Two subjects (one in the reference WLZ group and one undernourished) had, at 12 months, no diarrhea within 1 day of stool collection but reported diarrhea within 7 days prior. Length, cm kg Weight, Supplementary Figure 2. Length (left) and weight (right) z-scores of children recruited into clinical trial NCT00705445 during the first 24 months of life. Median and quantile values are shown, with medians for participants profiled in current study indicated by red (undernourished) and black (reference WLZ) lines. -
Why the –Omic Future of Apicomplexa Should Include Gregarines Julie Boisard, Isabelle Florent
Why the –omic future of Apicomplexa should include Gregarines Julie Boisard, Isabelle Florent To cite this version: Julie Boisard, Isabelle Florent. Why the –omic future of Apicomplexa should include Gregarines. Biology of the Cell, Wiley, 2020, 10.1111/boc.202000006. hal-02553206 HAL Id: hal-02553206 https://hal.archives-ouvertes.fr/hal-02553206 Submitted on 24 Apr 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Article title: Why the –omic future of Apicomplexa should include Gregarines. Names of authors: Julie BOISARD1,2 and Isabelle FLORENT1 Authors affiliations: 1. Molécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245), Département Adaptations du Vivant (AVIV), Muséum National d’Histoire Naturelle, CNRS, CP52, 57 rue Cuvier 75231 Paris Cedex 05, France. 2. Structure et instabilité des génomes (STRING UMR 7196 CNRS / INSERM U1154), Département Adaptations du vivant (AVIV), Muséum National d'Histoire Naturelle, CP 26, 57 rue Cuvier 75231 Paris Cedex 05, France. Short Title: Gregarines –omics for Apicomplexa studies -
The Revised Classification of Eukaryotes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/231610049 The Revised Classification of Eukaryotes Article in Journal of Eukaryotic Microbiology · September 2012 DOI: 10.1111/j.1550-7408.2012.00644.x · Source: PubMed CITATIONS READS 961 2,825 25 authors, including: Sina M Adl Alastair Simpson University of Saskatchewan Dalhousie University 118 PUBLICATIONS 8,522 CITATIONS 264 PUBLICATIONS 10,739 CITATIONS SEE PROFILE SEE PROFILE Christopher E Lane David Bass University of Rhode Island Natural History Museum, London 82 PUBLICATIONS 6,233 CITATIONS 464 PUBLICATIONS 7,765 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Biodiversity and ecology of soil taste amoeba View project Predator control of diversity View project All content following this page was uploaded by Smirnov Alexey on 25 October 2017. The user has requested enhancement of the downloaded file. The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D. -
An Abstract of the Thesis Of
AN ABSTRACT OF THE THESIS OF Sarah A. Maxfield-Taylor for the degree of Master of Science in Entomology presented on March 26, 2014. Title: Natural Enemies of Native Bumble Bees (Hymenoptera: Apidae) in Western Oregon Abstract approved: _____________________________________________ Sujaya U. Rao Bumble bees (Hymenoptera: Apidae) are important native pollinators in wild and agricultural systems, and are one of the few groups of native bees commercially bred for use in the pollination of a range of crops. In recent years, declines in bumble bees have been reported globally. One factor implicated in these declines, believed to affect bumble bee colonies in the wild and during rearing, is natural enemies. A diversity of fungi, protozoa, nematodes, and parasitoids has been reported to affect bumble bees, to varying extents, in different parts of the world. In contrast to reports of decline elsewhere, bumble bees have been thriving in Oregon on the West Coast of the U.S.A.. In particular, the agriculturally rich Willamette Valley in the western part of the state appears to be fostering several species. Little is known, however, about the natural enemies of bumble bees in this region. The objectives of this thesis were to: (1) identify pathogens and parasites in (a) bumble bees from the wild, and (b) bumble bees reared in captivity and (2) examine the effects of disease on bee hosts. Bumble bee queens and workers were collected from diverse locations in the Willamette Valley, in spring and summer. Bombus mixtus, Bombus nevadensis, and Bombus vosnesenskii collected from the wild were dissected and examined for pathogens and parasites, and these organisms were identified using morphological and molecular characteristics.