1 The complete mitochondrial genome sequence of the spider Habronattus oregonensis reveals 2 rearranged and extremely truncated tRNAs 3 4 5 Susan E. Masta 6 Jeffrey L. Boore 7 8 9 10 11 DOE Joint Genome Institute 12 Department of Evolutionary Genomics 13 2800 Mitchell Drive 14 Walnut Creek, CA 94598 15 16 Corresponding author: 17 Susan E. Masta 18 Department of Biology 19 P.O. Box 751 20 Portland State University 21 Portland, Oregon 97207 22 email:
[email protected] 23 telephone: (503) 725-8505 24 fax: (503) 725-3888 25 26 27 Key words: mitochondrial genome, truncated tRNAs, aminoacyl acceptor stem, gene 28 rearrangement, genome size, Habronattus oregonensis 29 30 31 Running head: mitochondrial genome of a spider 32 33 1 34 We sequenced the entire mitochondrial genome of the jumping spider Habronattus oregonensis 35 of the arachnid order Araneae (Arthropoda: Chelicerata). A number of unusual features 36 distinguish this genome from other chelicerate and arthropod mitochondrial genomes. Most of 37 the transfer RNA gene sequences are greatly reduced in size and cannot be folded into typical 38 cloverleaf-shaped secondary structures. At least nine of the tRNA sequences lack the potential to 39 form TYC arm stem pairings, and instead are inferred to have TV-replacement loops. 40 Furthermore, sequences that could encode the 3' aminoacyl acceptor stems in at least 10 tRNAs 41 appear to be lacking, because fully paired acceptor stems are not possible and because the 42 downstream sequences instead encode adjacent genes. Hence, these appear to be among the 43 smallest known tRNA genes.