Common Polymorphisms in C3, Factor B, and Factor H Collaborate to Determine Systemic Complement Activity and Disease Risk
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												WO 2016/147053 Al 22 September 2016 (22.09.2016) P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2016/147053 Al 22 September 2016 (22.09.2016) P O P C T (51) International Patent Classification: (71) Applicant: RESVERLOGIX CORP. [CA/CA]; 300, A61K 31/551 (2006.01) A61P 37/02 (2006.01) 4820 Richard Road Sw, Calgary, AB, T3E 6L1 (CA). A61K 31/517 (2006.01) C07D 239/91 (2006.01) (72) Inventors: WASIAK, Sylwia; 431 Whispering Water (21) International Application Number: Trail, Calgary, AB, T3Z 3V1 (CA). KULIKOWSKI, PCT/IB20 16/000443 Ewelina, B.; 31100 Swift Creek Terrace, Calgary, AB, T3Z 0B7 (CA). HALLIDAY, Christopher, R.A.; 403 (22) International Filing Date: 138-18th Avenue SE, Calgary, AB, T2G 5P9 (CA). GIL- 10 March 2016 (10.03.2016) HAM, Dean; 249 Scenic View Close NW, Calgary, AB, (25) Filing Language: English T3L 1Y5 (CA). (26) Publication Language: English (81) Designated States (unless otherwise indicated, for every kind of national protection available): AE, AG, AL, AM, (30) Priority Data: AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, 62/132,572 13 March 2015 (13.03.2015) US BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, 62/264,768 8 December 2015 (08. 12.2015) US DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, [Continued on nextpage] (54) Title: COMPOSITIONS AND THERAPEUTIC METHODS FOR THE TREATMENT OF COMPLEMENT-ASSOCIATED DISEASES (57) Abstract: The invention comprises methods of modulating the complement cascade in a mammal and for treating and/or preventing diseases and disorders as sociated with the complement pathway by administering a compound of Formula I or Formula II, such as, for example, 2-(4-(2-hydroxyethoxy)-3,5-dimethylphenyl)- 5,7-dimethoxyquinazolin-4(3H)-one or a pharmaceutically acceptable salt thereof. - 
												
												Clinical Study High Complement Factor I Activity in the Plasma of Children with Autism Spectrum Disorders
Hindawi Publishing Corporation Autism Research and Treatment Volume 2012, Article ID 868576, 6 pages doi:10.1155/2012/868576 Clinical Study High Complement Factor I Activity in the Plasma of Children with Autism Spectrum Disorders Naghi Momeni,1 Lars Brudin,2 Fatemeh Behnia,3 Berit Nordstrom,¨ 4 Ali Yosefi-Oudarji,5 Bengt Sivberg,4 Mohammad T. Joghataei,5 and Bengt L. Persson1 1 School of Natural Sciences, Linnaeus University, 39182 Kalmar, Sweden 2 Department of Clinical Physiology, Kalmar County Hospital, 39185 Kalmar, Sweden 3 Department of Occupational Therapy, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran 4 Department of Health Sciences, Autism Research, Faculty of Medicine, Lund University, Box 157, 22100 Lund, Sweden 5 Cellular and Molecular Research Centre, Tehran University of Medical Sciences (TUMS), Tehran, Iran Correspondence should be addressed to Bengt Sivberg, [email protected] Received 17 June 2011; Revised 22 August 2011; Accepted 22 August 2011 Academic Editor: Judy Van de Water Copyright © 2012 Naghi Momeni et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Autism spectrum disorders (ASDs) are neurodevelopmental and behavioural syndromes affecting social orientation, behaviour, and communication that can be classified as developmental disorders. ASD is also associated with immune system abnormality. Im- mune system abnormalities may be caused partly by complement system factor I deficiency. Complement factor I is a serine pro- tease present in human plasma that is involved in the degradation of complement protein C3b, which is a major opsonin of the complement system. - 
												
												Advances in Hematology
ADVANCES IN HEMATOLOGY Current Developments in the Management of Hematologic Disorders Hematology Section Editor: Craig M. Kessler, MD Atypical Hemolytic Uremic Syndrome: The Role of Complement Pathway Gene Mutation Analysis Ilene C. Weitz, MD Associate Professor of Clinical Medicine Jane Anne Nohl Division of Hematology Keck School of Medicine of USC Los Angeles, California H&O What causes atypical hemolytic uremic H&O Which mutations in complement alternative syndrome (aHUS)? pathway genes are linked to aHUS? IW We think that most people with aHUS have problems IW Multiple genetic mutations have been linked to with regulation of complement. As a result of excess com- aHUS, especially those involved in the complement plement, endothelial and organ damage occur. We know alternative pathway. These include mutations in comple- that mutations in the genes of complement regulatory pro- ment factor H, complement factor I, membrane cofactor teins are associated with aHUS. In addition, factors other protein, complement factor B, and C3 nephritic factor. than underlying mutations may play a role in increasing Mutations may cause the protein to be normal but low in activation and the expression of the clinical syndrome. quantity, or normal in quantity but abnormal in function; the degree of the abnormality may depend on whether the H&O How is the complement system activated patient is heterozygous or homozygous. and regulated? In addition, other factors such as thrombomodulin have been described that work through other enzymes. IW The complement system is a part of the innate Thrombomodulin is involved in complement regulation immune system that is necessary for fighting infections by activating thrombin activatable fibrinolytic inhibitor and aberrant immunologic stimuli. - 
												
												Properdin Factor D: Effects on Thrombin-Induced Platelet Aggregation
Properdin factor D: effects on thrombin-induced platelet aggregation. A E Davis 3rd, D M Kenney J Clin Invest. 1979;64(3):721-728. https://doi.org/10.1172/JCI109515. Research Article Factor D, when preincubated with platelet suspensions, at concentrations as low as 1.2 micrograms/ml, inhibited thrombin-induced platelet aggregation. No inhibition of collagen or arachidonic acid-induced platelet aggregation was found. Inhibition occurred, but to a lesser extent, when thrombin and factor D were added to platelets at the same time. No inhibition occurred when factor D was added after thrombin. Thrombin was able to overcome inhibition by factor D by increasing its concentration. Diisopropyl-phosphorofluoridate-inactivated factor D also inhibited thrombin-induced platelet aggregation so that enzymatic activity of factor D was not required for inhibition. Factor D absorbed with hirudin coupled to Sepharose 6B showed no decrease in inhibitory capacity. 125I-Factor D bound to platelets in a manner suggesting an equilibrium reaction similar to thrombin. At low factor D input, binding was linear, whereas at higher input, binding began to approach saturation. Binding of 125I-labeled thrombin to platelets was inhibited by factor D. Analysis of these data show that factor D does not alter the total number of thrombin molecules which bind to the platelet surface at saturation. However, the dissociation constant for thrombin is altered from 2.78 to 6.90 nM in the presence of factor D (20 micrograms/ml). Factor D is thus a competitive inhibitor of thrombin binding, although the affinity of factor D for the platelet thrombin receptor is much less […] Find the latest version: https://jci.me/109515/pdf Properdin Factor D EFFECTS ON THROMBIN-INDUCED PLATELET AGGREGATION ALVIN E. - 
												
												Complement Factor B Antibody Cat
Complement Factor B Antibody Cat. No.: 16-846 Complement Factor B Antibody Immunohistochemistry of paraffin-embedded human mammary cancer using Immunohistochemistry of paraffin-embedded mouse lung using Complement Factor B Complement Factor B antibody (16-846) at dilution of 1:200 (40x lens). antibody (16-846) at dilution of 1:200 (40x lens). Immunofluorescence analysis of Raw264.7 cells using Complement Factor B Polyclonal Antibody (16-846) at dilution of 1:100 (40x lens). Blue: DAPI for nuclear staining. September 29, 2021 1 https://www.prosci-inc.com/complement-factor-b-antibody-16-846.html Specifications HOST SPECIES: Rabbit SPECIES REACTIVITY: Human, Mouse, Rat Recombinant fusion protein containing a sequence corresponding to amino acids 80-420 IMMUNOGEN: of human Complement Factor B (NP_001701.2). TESTED APPLICATIONS: IF, IHC, IP, WB WB: ,1:500 - 1:2000 IHC: ,1:50 - 1:200 APPLICATIONS: IF: ,1:50 - 1:200 IP: ,1:20 - 1:50 POSITIVE CONTROL: 1) HT-29 2) K-562 3) 293T 4) A-549 5) HepG2 6) Mouse liver PREDICTED MOLECULAR Observed: 86kDa WEIGHT: Properties PURIFICATION: Affinity purification CLONALITY: Polyclonal ISOTYPE: IgG CONJUGATE: Unconjugated PHYSICAL STATE: Liquid BUFFER: PBS with 0.02% sodium azide, 50% glycerol, pH7.3. STORAGE CONDITIONS: Store at -20˚C. Avoid freeze / thaw cycles. Additional Info OFFICIAL SYMBOL: CFB September 29, 2021 2 https://www.prosci-inc.com/complement-factor-b-antibody-16-846.html Complement factor B, C3/C5 convertase, Glycine-rich beta glycoprotein, GBG, PBF2, ALTERNATE NAMES: Properdin factor B, Complement factor B Ba fragment, Complement factor B Bb fragment, CFB, BF, BFD GENE ID: 629 USER NOTE: Optimal dilutions for each application to be determined by the researcher. - 
												
												367.Full.Pdf
Human Complement Factor I Does Not Require Cofactors for Cleavage of Synthetic Substrates This information is current as Stefanos A. Tsiftsoglou and Robert B. Sim of October 2, 2021. J Immunol 2004; 173:367-375; ; doi: 10.4049/jimmunol.173.1.367 http://www.jimmunol.org/content/173/1/367 Downloaded from References This article cites 41 articles, 17 of which you can access for free at: http://www.jimmunol.org/content/173/1/367.full#ref-list-1 Why The JI? Submit online. http://www.jimmunol.org/ • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists • Fast Publication! 4 weeks from acceptance to publication *average by guest on October 2, 2021 Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2004 by The American Association of Immunologists All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal of Immunology Human Complement Factor I Does Not Require Cofactors for Cleavage of Synthetic Substrates1 Stefanos A. Tsiftsoglou2 and Robert B. Sim Complement factor I (fI) plays a major role in the regulation of the complement system. It circulates in an active form and has very restricted specificity, cleaving only C3b or C4b in the presence of a cofactor such as factor H (fH), complement receptor type 1, membrane cofactor protein, or C4-binding protein. - 
												
												Review Article Complement System and Age-Related Macular Degeneration: Implications of Gene-Environment Interaction for Preventive and Personalized Medicine
Hindawi BioMed Research International Volume 2018, Article ID 7532507, 13 pages https://doi.org/10.1155/2018/7532507 Review Article Complement System and Age-Related Macular Degeneration: Implications of Gene-Environment Interaction for Preventive and Personalized Medicine Andrea Maugeri ,1 Martina Barchitta ,1 Maria Grazia Mazzone,2 Francesco Giuliano,2 and Antonella Agodi 1 1 Department of Medical and Surgical Sciences and Advanced Technologies “GF Ingrassia”, University of Catania, Via S. Sofa 87, 95123 Catania, Italy 2SIFI SpA, Research and Development Department, Via Ercole Patti 36, 95025 Catania, Italy Correspondence should be addressed to Antonella Agodi; [email protected] Received 18 May 2018; Accepted 18 July 2018; Published 26 August 2018 Academic Editor: Sajib Chakraborty Copyright © 2018 Andrea Maugeri et al. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Age-related macular degeneration (AMD) is the most common cause of visual loss in developed countries, with a signifcant economic and social burden on public health. Although genome-wide and gene-candidate studies have been enabled to identify genetic variants in the complement system associated with AMD pathogenesis, the efect of gene-environment interaction is still under debate. In this review we provide an overview of the role of complement system and its genetic variants in AMD, summarizing the consequences of the interaction between genetic and environmental risk factors on AMD onset, progression, and therapeutic response. Finally, we discuss the perspectives of current evidence in the feld of genomics driven personalized medicine and public health. - 
												
												Crystal Structure of Prethrombin-1
Crystal structure of prethrombin-1 Zhiwei Chen, Leslie A. Pelc, and Enrico Di Cera1 Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, Saint Louis, MO 63104 Edited by Robert M. Stroud, University of California, San Francisco, CA, and approved September 24, 2010 (received for review July 14, 2010) Prothrombin is the zymogen precursor of the clotting enzyme thrombin, which is generated by two sequential cleavages at R271 and R320 by the prothrombinase complex. The structure of prothrombin is currently unknown. Prethrombin-1 differs from pro- thrombin for the absence of 155 residues in the N-terminal domain and is composed of a single polypeptide chain containing fragment 2 (residues 156–271), A chain (residues 272–320), and B chain (re- sidues 321–579). The X-ray crystal structure of prethrombin-1 solved at 2.2-Å resolution shows an overall conformation signifi- cantly different (rmsd ¼ 3.6 Å) from that of its active form meizo- thrombin desF1 carrying a cleavage at R320. Fragment 2 is rotated around the y axis by 29° and makes only few contacts with the B chain. In the B chain, the oxyanion hole is disrupted due to absence of the I16-D194 ion pair and the Naþ binding site and adjacent primary specificity pocket are highly perturbed. A remarkable feature of the structure is that the autolysis loop assumes a helical conformation enabling W148 and W215, located 17 Å apart in mei- zothrombin desF1, to come within 3.3 Å of each other and comple- tely occlude access to the active site. - 
												
												Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase - 
												
												Factor B, the Complement Alternative Pathway Serine Proteinase, Is a Major Constitutive Protein Synthesized and Secreted by Resident and Elicited Mouse Macrophages
FACTOR B, THE COMPLEMENT ALTERNATIVE PATHWAY SERINE PROTEINASE, IS A MAJOR CONSTITUTIVE PROTEIN SYNTHESIZED AND SECRETED BY RESIDENT AND ELICITED MOUSE MACROPHAGES BY JOHN S. SUNDSMO, JENNIE R. CHIN,* RUTH A. PAPIN, DARYL S. FAIR, AND ZENA WERB* From the Department of Molecular Immunology, Scripps Clinic and Research Foundation, La Jolla, California 92037; and the *Laboratory of Radiobiology and Environmental Health, and Department of Anatomy, University of California, San Francisco, California 94143 Mononuclear phagocytes have been increasingly recognized as a source of many of the complement proteins (1, 2). Activities constituting the intact com- plement alternative pathway in serum (factor B, factor D, C3, and properdin) (3-8), as well as the regulatory proteins, factors H and I (5, 8), are produced by mouse peritoneal macrophages and human peripheral blood monocytes. Factors C2 and C4 are also synthesized by mononuclear phagocytes (1, 2, 5, 9-11). Factor B, a glycoprotein of Mr ~0.3,000 that plays a central role in the alternative pathway of complement activation (12, 13), is closely associated with the immune response as a class III gene product of the major histocompatibility complex in mice (14, 15), guinea pigs (16), and humans (17). Activated factor B (Bb, Mr ~60,000) serves as a migration inhibiting factor (18), inducing macro- phage and monocyte spreading (19, 20) and possibly stimulating cytotoxic (21, 22) and bacteriocidai activities (23, 24) of monocytes in vitro. The hemolytic activity of factor B produced by resident mouse peritoneal macrophages (3, 6) increases linearly during 72-96 h in culture, and its synthesis is regulated by lipopolysaccharide (LPS) 1 (24). - 
												
												Differential and Altered Spatial Distribution of Complement Expression in Age-Related Macular Degeneration
Physiology and Pharmacology Differential and Altered Spatial Distribution of Complement Expression in Age-Related Macular Degeneration John T. Demirs, Junzheng Yang, Maura A. Crowley, Michael Twarog, Omar Delgado, Yubin Qiu, Stephen Poor, Dennis S. Rice, Thaddeus P. Dryja,* Karen Anderson,** and Sha-Mei Liao Department of Ophthalmology, Novartis Institutes for Biomedical Research, Cambridge, Massachusetts, United States Correspondence: Sha-Mei Liao, 22 PURPOSE. Dysregulation of the alternative complement pathway is a major pathogenic Windsor Street, Cambridge, MA mechanism in age-related macular degeneration. We investigated whether locally synthe- 02139, USA; sized complement components contribute to AMD by profiling complement expression [email protected]. in postmortem eyes with and without AMD. Current affiliation: *Cogan Eye METHODS. AMD severity grade 1 to 4 was determined by analysis of postmortem acquired Pathology Laboratory, Massachusetts fundus images and hematoxylin and eosin stained histological sections. TaqMan (donor Eye and Ear, Boston, Massachusetts, eyes n = 39) and RNAscope/in situ hybridization (n = 10) were performed to detect United States. = ** Biogen, Cambridge, complement mRNA. Meso scale discovery assay and Western blot (n 31) were used to Massachusetts, United States. measure complement protein levels. Received: September 2, 2020 RESULTS. The levels of complement mRNA and protein expression were approximately Accepted: May 19, 2021 15- to 100-fold (P < 0.0001–0.001) higher in macular retinal pigment epithelium Published: June 23, 2021 (RPE)/choroid tissue than in neural retina, regardless of AMD grade status. Complement Citation: Demirs JT, Yang J, Crowley mRNA and protein levels were modestly elevated in vitreous and the macular neural MA, et al. - 
												
												Steffensen Et Al. Supplement 2A
Liver Wild-type Knockout 1 2 4 1 2 4 1 1 1 C C C C C C W W W K K K IMAGE:640919 expressed sequence AA960558 IMAGE:523974 RIKEN cDNA 1810004N01 gene IMAGE:1211217 eukaryotic translation initiation factor 4E binding protein 2 IMAGE:314741 beta-site APP cleaving enzyme IMAGE:1038420 silica-induced gene 41 IMAGE:1229655 soc-2 suppressor of clear homolog C. elegans IMAGE:1150065 Unknown IMAGE:1038486 RIKEN cDNA 2700038M07 gene IMAGE:524351 amyloid beta A4 precursor protein IMAGE:819912 thymus expressed acidic protein IMAGE:779426 RIKEN cDNA 5230400G24 gene IMAGE:945643 ESTs IMAGE:850544 Mpv17 transgene, kidney disease mutant IMAGE:537568 expressed sequence AA675315 IMAGE:1107584 yes-associated protein, 65 kDa IMAGE:961363 expressed sequence AU015422 IMAGE:775218 expressed sequence AI265322 IMAGE:792656 protein phosphatase 1B, magnesium dependent, beta isoform IMAGE:1038592 ESTs, Weakly similar to A43932 mucin 2 precursor, intestinal [H.sapiens] IMAGE:1224917 huntingtin interacting protein 2 IMAGE:751186 ESTs IMAGE:865151 Trk-fused gene IMAGE:523016 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 IMAGE:765039 FBJ osteosarcoma oncogene B IMAGE:1003995 expressed sequence AI844632 IMAGE:903863 RIKEN cDNA 1300006L01 gene IMAGE:934094 ESTs IMAGE:988962 expressed sequence C77245 IMAGE:1023308 ESTs, Weakly similar to S71512 hypothetical protein T2 - mouse [M.musculus] IMAGE:865317 eukaryotic translation initiation factor 3 IMAGE:720445 ribosomal protein S6 IMAGE:1005417 expressed sequence AU024550