Collecting to the Core: Evolution for Everyone Anne Doherty CHOICE/ACRL, [email protected]
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Alfred Romer – Wikipedia
Alfred Romer – Wikipedia https://de.wikipedia.org/wiki/Alfred_Romer aus Wikipedia, der freien Enzyklopädie Alfred Sherwood Romer (* 28. Dezember 1894 in White Plains, New York; † 5. November 1973) war ein US-amerikanischer Paläontologe. Sein Fachgebiet war die Evolution der Wirbeltiere. Inhaltsverzeichnis 1 Leben 2 Romer-Lücke 3 Auszeichnungen und Ehrungen 4 Schriften 5 Weblinks 6 Einzelnachweise Leben Alfred Sherwood Romer wurde in White Plains, New York geboren, wo er seinen High-School-Abschluss machte. Danach arbeitete er ein Jahr lang als Angestellter bei der Eisenbahn und entschloss sich dann doch für den Besuch eines College. Mit Hilfe eines Stipendiums vom Amherst College konnte er dort Geschichte und deutsche Literatur studieren. Durch häufige Besuche des American Museum of Natural History entdeckte er seine Begeisterung für naturkundliche Fossilien. Bei Ausbruch des Ersten Weltkriegs meldete er sich als Freiwilliger zum Kriegsdienst und wurde sofort in Frankreich eingesetzt. 1919 kam er zurück nach New York und nahm das Studium der Biologie an der Columbia University auf, das er bereits zwei Jahre später mit der Promotion abschloss. Danach war er als wissenschaftliche Hilfskraft an der Bellevue Medical School der New York University beschäftigt und lehrte insbesondere Histologie, Embryologie und Allgemeine Anatomie. 1923 erhielt er einen Ruf von der Universität Chicago, wo er seine spätere Ehefrau Ruth kennenlernte, mit der er drei Kinder hatte. In Chicago fand er Bedingungen vor, die es ihm ermöglichten, sein Hauptinteresse zu intensivieren - die Paläontologie. So entstanden in den Jahren von 1925 bis 1935 37 Fachartikel, die sich mit diesem Thema befassten. 1934 wurde er zum Professor für Biologie an der Harvard University ernannt. -
Book Review: Jerry A. Coyne's Why Evolution Is True
A peer-reviewed electronic journal published by the Institute for Ethics and Emerging Technologies ISSN 1541-0099 20(1) – June 2009 Book review: Jerry A. Coyne’s Why Evolution Is True Russell Blackford, Monash University Editor-in-Chief, Journal of Evolution and Technology Journal of Evolution and Technology - Vol. 20 Issue 1 – June 2009 - pgs 61-66 http://jetpress.org/v20/blackford.htm Why Evolution Is True. By Jerry A. Coyne. Viking, New York, 2009. 282 pp., $27.95 (hardback). ISBN: 978 0 670 02053 9 (all page references to this edition) Jerry A. Coyne is a professor at the University of Chicago, where his research focuses on evolutionary genetics and speciation. In Why Evolution Is True, he presents a full-scale defence of modern evolutionary theory, which can, so he notes, be described in one long sentence: Life on earth evolved gradually beginning with one primitive species – perhaps a self-replicating molecule – that lived more than 3.5 billion years ago; it then branched out over time, throwing off many new and diverse species; and the mechanism for most (but not all) of evolutionary change is natural selection. (3.) This breaks down into six components: the fact of evolution, in the sense of genetic change over time; the idea of gradualism, of changes taking place over many generations (although sometimes they come about relatively quickly, depending on the evolutionary pressures operating); the phenomenon of speciation, whereby new species split off from existing lineages; the common ancestry of different species, since new species, -
Evolution Is a Short-Order Cook, Not a Watchmaker
NATURE|Vol 435|19 May 2005 CORRESPONDENCE When science meets religion in the classroom SIR – In the Editorial “Dealing with design” such a reconciliation impossible because faith scientific challenges to their faith should seek (Nature434,1053; 2005), Natureclaims that and science are two mutually exclusive ways guidance from a theologian, not a scientist. scientists have not dealt effectively with the of looking at the world. For such scientists, Scientists should never have to apologize for threat to evolutionary biology posed by Natureapparently prescribes hypocrisy. The teaching science. ‘intelligent design’ (ID) creationism. Rather real business of science teachers is to teach Jerry Coyne than ignoring, dismissing or attacking ID, science, not to help students shore up world- Department of Ecology and Evolution, University scientists should, the editors suggest, learn views that crumble when they learn science. of Chicago, Chicago, Illinois 60637, USA how religious people can come to terms And ID creationism is not science, despite Peter AtkinsLincoln College, University of Oxford with science, and teach these methods of the editors’ suggestion that ID “tries to use Colin BlakemoreMedical Research Council, London accommodation in the classroom. The goal scientific methods to find evidence of God in Richard DawkinsOxford University Museum, University of Oxford of science education should thus be “to point nature”. Rather, advocates of ID pretend to use Steve JonesGalton Laboratories, University College London to options other than ID for reconciling scientific methods to support their religious Richard LewontinMuseum of Comparative Zoology, Harvard University science and belief ”. In this way, students’ faith preconceptions. It has no more place in the John Maddox 9 Pitt Street, London W8 4NX will not be challenged by scientific truth, and biology classroom than geocentrism has in Paul NurseThe Rockefeller University, New York evolution will triumph. -
Molecular Evolution
An Introduction to Bioinformatics Algorithms www.bioalgorithms.info Molecular Evolution An Introduction to Bioinformatics Algorithms www.bioalgorithms.info Outline • Evolutionary Tree Reconstruction • “Out of Africa” hypothesis • Did we evolve from Neanderthals? • Distance Based Phylogeny • Neighbor Joining Algorithm • Additive Phylogeny • Least Squares Distance Phylogeny • UPGMA • Character Based Phylogeny • Small Parsimony Problem • Fitch and Sankoff Algorithms • Large Parsimony Problem • Evolution of Wings • HIV Evolution • Evolution of Human Repeats An Introduction to Bioinformatics Algorithms www.bioalgorithms.info Early Evolutionary Studies • Anatomical features were the dominant criteria used to derive evolutionary relationships between species since Darwin till early 1960s • The evolutionary relationships derived from these relatively subjective observations were often inconclusive. Some of them were later proved incorrect An Introduction to Bioinformatics Algorithms www.bioalgorithms.info Evolution and DNA Analysis: the Giant Panda Riddle • For roughly 100 years scientists were unable to figure out which family the giant panda belongs to • Giant pandas look like bears but have features that are unusual for bears and typical for raccoons, e.g., they do not hibernate • In 1985, Steven O’Brien and colleagues solved the giant panda classification problem using DNA sequences and algorithms An Introduction to Bioinformatics Algorithms www.bioalgorithms.info Evolutionary Tree of Bears and Raccoons An Introduction to Bioinformatics Algorithms www.bioalgorithms.info Evolutionary Trees: DNA-based Approach • 40 years ago: Emile Zuckerkandl and Linus Pauling brought reconstructing evolutionary relationships with DNA into the spotlight • In the first few years after Zuckerkandl and Pauling proposed using DNA for evolutionary studies, the possibility of reconstructing evolutionary trees by DNA analysis was hotly debated • Now it is a dominant approach to study evolution. -
Concentration-Affinity Equivalence in Gene Regulation: Convergence Of
Proc. Nad. Acad. Sci. USA Vol. 85, pp. 4784-4788, July 1988 Evolution Concentration-affinity equivalence in gene regulation: Convergence of genetic and environmental effects (phenocopies/parallel evolution/genetic assimilation/expressivity/penetrance) EMILE ZUCKERKANDL* AND RUXTON VILLETt *Linus Pauling Institute of Science and Medicine, 440 Page Mill Road, Palo Alto, CA 94306; and tU.S. Department of Agriculture, Agricultural Research Services, National Program Staff, Building 05S, BARC-West, Beltsville, MD 20705 Communicated by Francisco J. Ayala, March 21, 1988 ABSTRACT It is proposed that equivalent phenotypic affinity can also be altered by a reversible structural change effects can be obtained by either structural changes in macro- in the protein, resulting in a modification of specific fit molecules involved in gene regulation or changes in activity of between macromolecules and brought about by a combina- the structurally unaltered macromolecules. This equivalence tion with, or by the release of, an effector. An important between changes in activity (concentration) and changes in variant of the latter process is a reversible formation of a structure can come into play within physiologically plausible covalent compound between a polynucleotide-binding pro- limits and seems to represent an important interface between tein and some other organic moiety (e.g., acetylation, ADP- environment and genome-namely, between environmentally ribosylation; see ref. 6). The potential equivalence is between determined and genetically determined gene expression. The the effect of a change in component concentration (activity) equivalence principle helps explain the appearance of pheno- under a constant structural state and the effect ofa structural copies. It also points to a general pathway favorable to the modification under constant component concentration (ac- occurrence, during evolution, offrequent episodes correspond- tivity). -
MOLECULAR CLOCKS Definition Introduction
MOLECULAR CLOCKS 583 Kishino, H., Thorne, J. L., and Bruno, W. J., 2001. Performance of Thorne, J. L., Kishino, H., and Painter, I. S., 1998. Estimating the a divergence time estimation method under a probabilistic model rate of evolution of the rate of molecular evolution. Molecular of rate evolution. Molecular Biology and Evolution, 18,352–361. Biology and Evolution, 15, 1647–1657. Kodandaramaiah, U., 2011. Tectonic calibrations in molecular dat- Warnock, R. C. M., Yang, Z., Donoghue, P. C. J., 2012. Exploring ing. Current Zoology, 57,116–124. uncertainty in the calibration of the molecular clock. Biology Marshall, C. R., 1997. Confidence intervals on stratigraphic ranges Letters, 8, 156–159. with nonrandom distributions of fossil horizons. Paleobiology, Wilkinson, R. D., Steiper, M. E., Soligo, C., Martin, R. D., Yang, Z., 23, 165–173. and Tavaré, S., 2011. Dating primate divergences through an Müller, J., and Reisz, R. R., 2005. Four well-constrained calibration integrated analysis of palaeontological and molecular data. Sys- points from the vertebrate fossil record for molecular clock esti- tematic Biology, 60,16–31. mates. Bioessays, 27, 1069–1075. Yang, Z., and Rannala, B., 2006. Bayesian estimation of species Parham, J. F., Donoghue, P. C. J., Bell, C. J., et al., 2012. Best practices divergence times under a molecular clock using multiple fossil for justifying fossil calibrations. Systematic Biology, 61,346–359. calibrations with soft bounds. Molecular Biology and Evolution, Peters, S. E., 2005. Geologic constraints on the macroevolutionary 23, 212–226. history of marine animals. Proceedings of the National Academy Zuckerkandl, E., and Pauling, L., 1962. Molecular disease, evolution of Sciences, 102, 12326–12331. -
Manipulating Underdetermination in Scientific Controversy: the Case of the Molecular Clock
Dartmouth College Dartmouth Digital Commons Open Dartmouth: Published works by Dartmouth faculty Faculty Work 9-1-2007 Manipulating Underdetermination in Scientific Controversy: The Case of the Molecular Clock Michael Dietrich Dartmouth College Robert A. Skipper University of Cincinnati Follow this and additional works at: https://digitalcommons.dartmouth.edu/facoa Part of the Biology Commons Dartmouth Digital Commons Citation Dietrich, Michael and Skipper, Robert A., "Manipulating Underdetermination in Scientific Controversy: The Case of the Molecular Clock" (2007). Open Dartmouth: Published works by Dartmouth faculty. 16. https://digitalcommons.dartmouth.edu/facoa/16 This Article is brought to you for free and open access by the Faculty Work at Dartmouth Digital Commons. It has been accepted for inclusion in Open Dartmouth: Published works by Dartmouth faculty by an authorized administrator of Dartmouth Digital Commons. For more information, please contact [email protected]. Manipulating Underdetermination in Scientiªc Controversy: The Case of the Molecular Clock Michael R. Dietrich Dartmouth College Robert A. Skipper, Jr. University of Cincinnati Where there are cases of underdetermination in scientiªc controversies, such as the case of the molecular clock, scientists may direct the course and terms of dispute by playing off the multidimensional framework of theory evaluation. This is because assessment strategies themselves are underdetermined. Within the framework of assessment, there are a variety of trade-offs between differ- ent strategies as well as shifting emphases as speciªc strategies are given more or less weight in assessment situations. When a strategy is underdetermined, scientists can change the dynamics of a controversy by making assessments using different combinations of evaluation strategies and/or weighting what- ever strategies are in play in different ways. -
What Is the Viewpoint of Hemoglobin, and Does It Matter?
Hist. Phil. Life Sci., 31 (2009), 241-262 What is the Viewpoint of Hemoglobin, and Does It Matter? Jonathan Marks University of North Carolina at Charlotte Department of Anthropology Charlotte, NC 28223, USA ABSTRACT - In this paper I discuss reductive trends in evolutionary anthropology. The first involved the reduction of human ancestry to genetic relationships (in the 1960s) and the second involved a parallel reduction of classification to phylogenetic retrieval (in the 1980s). Neither of these affords greater accuracy than their alternatives; that is to say, their novelty is epistemic, not empirical. As a result, there has been a revolution in classification in evolutionary anthropology, which arguably clouds the biological relationships of the relevant species, rather than clarifying them. Just below the species level, another taxonomic issue is raised by the reinscription of race as a natural category of the human species. This, too, is driven by the convergent interests of cultural forces including conservative political ideologies, the creation of pharmaceutical niche markets, free-market genomics, and old- fashioned scientific racism. KEYWORDS – Molecular anthropology, Systematics, Classification, Human evolution Introduction In this paper I explore the intersection of genetics, taxonomy, and evolutionary anthropology. All three fields are scientific areas saturated with cultural meanings and associations. First, genetics is the scientific study of heredity, but has historically capitalized on non-scientific prejudices about heredity to curry support: hence James Watson’s epigrammatic proclamation in support of the Human Genome Project, “We used to think our fate was in the stars. Now we know, in large measure, our fate is in our genes” (Jaroff 1989; Duster 1990; Nelkin and Lindee 1995). -
“The Church of the Homeless Jesus As a Home for the Holidays” Advent 4C (December 23, 2018) Rev. Dr. David A. Kaden >>
1 “The Church of the Homeless Jesus as a Home for the Holidays” Advent 4C (December 23, 2018) Rev. Dr. David A. Kaden >>Put a hand on our shoulder and point us in the right direction. Put our hand on someone’s shoulder and let it matter. Amen<< On Friday, Jerry Coyne, Emeritus Professor of Ecology and Evolution at the University of Chicago, published a piece titled, “Yes, There is a War between Science and Religion.”1 Science, he writes, searches for “truth about the universe” through observation, “doing experiments,” and “replicating … [the] results.” Religion, on the other hand, he says, searches for truth “via dogma, scripture, and authority.” “The conflict between [them],” he says, “rests on the [conflicting] methods they use to decide what is truth … .” I winced when I read Coyne’s characterization of religion with the words “dogma” and “authority.” I wonder if he’s ever been to a UCC church! Friday’s article was not the first time Coyne made this argument. He published a book on the conflict between science and religion back in 2015, which won mixed reviews in the Washington Post, The Atlantic, and others. Mixed reviews, because it seems that whenever scientists venture of course into the churning waters of the religious world, in order to criticize religion, they tend to take aim at the easy conservative religious targets: Coyne’s easy target is the dismissal of climate change by some more conservative people of faith, who ignore the warnings of scientists - an example of people of faith venturing off course into the world of science. -
Proceedings of the Open University Geological Society
Proceedings of the Open University Geological Society Volume 4 2018 Including lecture articles from the AGM 2017, the Milton Keynes Symposium 2017, OUGS Members’ field trip reports, the Annual Report for 2017, and the 2017 Moyra Eldridge Photographic Competition winning and highly commended photographs Edited and designed by: Dr David M. Jones 41 Blackburn Way, Godalming, Surrey GU7 1JY e-mail: [email protected] The Open University Geological Society (OUGS) and its Proceedings Editor accept no responsibility for breach of copyright. Copyright for the work remains with the authors, but copyright for the published articles is that of the OUGS. ISSN 2058-5209 © Copyright reserved Proceedings of the OUGS 4 2018; published 2018; printed by Hobbs the Printers Ltd, Totton, Hampshire Evolution of life on land: how new Scottish fossils are re-writing our under- standing of this important transition Dr Tim Kearsey BGS Edinburgh Romer’s gap — a hole in our understanding t has long been understood that at some point in the evolution Meanwhile at a quarry called East Kirkton Quarry near Iof vertebrates there was a transition point where they moved Edinburgh in Scotland vertebrate fossils were discovered that are from mainly subsiding in water to living on land. However, until 10 million years younger than the Greenland fossils. These include recently there had been no fossil evidence that documented how Westlothiana, which is thought to be the first amniote (egg-layer) vertebrate life stepped from water to land. This significant hole in or possibly early reptile (Smithson and Rolfe 1990) and scientific knowledge of evolution is referred to as Romer’s gap Balanerpeton an extinct genus of temnospondyl amphibian. -
Why Evolutionary Psychology Is 'True". a Review of Jerry Coyne, Why
Evolutionary Psychology www.epjournal.net – 2009. 7(2): 288-294 ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯ Book Review Why Evolutionary Psychology is “True” 1 A review of Jerry Coyne, Why Evolution is True. Viking Penguin: New York, 2009, 304 pp., US$27.95, ISBN-13 978-0-670-02053-9 (hardcover) James R. Liddle, Florida Atlantic University, Department of Psychology, Davie, FL 33314 USA, Email: [email protected] (corresponding author). Todd K. Shackelford, Florida Atlantic University, Department of Psychology, Davie, FL 33314 USA, Email: [email protected]. Jerry Coyne is a professor in the Department of Ecology and Evolution at the University of Chicago. In Why Evolution is True (WEIT), he undertakes a daunting task: to provide a thorough yet concise and readable account of the evidence in support of evolution. It is difficult to overstate Coyne’s success in meeting this goal. From fossils and embryos to biogeography and speciation, Coyne not only reviews detailed evidence for evolution, but also explains why this evidence is exactly what we would expect to find if evolution were true, all with a writing style that is engaging and accessible. Coyne is also successful in what is obviously another of his goals, which is to provide a devastating response to creationist arguments. Several reviews have summarized the many excellent aspects of WEIT (e.g., Dawkins, 2009; Futuyma, 2009; Padian, 2009). In this review, we address an aspect of WEIT that appears to have been mentioned in just one other review. Futuyma (2009) briefly mentions Coyne’s critique of evolutionary psychology, suggesting that “one might make more allowance for the possible validity of hypotheses in this field” (p. -
Jerry Coyne the Faith That Dare Not Speak Its Name the Case Against Intelligent Design
the new republic P august 22 & 29, 2005 21 Wolsky had fabrics made. “Samples long as we’re there, we might as well ap- pictures possible?” I asked who that per- would go back and forth until we could preciate the good ones. We might also son might be. Fellini said, “Piero Gher- arrive at the right weight, weave and col- remember that costumes are usually ex- ardi.” Gherardi was the designer, a long- or.... Everything that Tom Hanks wore tensions of the director’s concept of the time colleague of Fellini’s. He was out of was woven for him.” The facing photo of film. In 1964 I spent a day with Federico town at the moment, and by the time I Hanks in his long overcoat makes us Fellini in Rome while he was shooting got back to Rome he had died. But I nev- grateful for Wolsky’s care. Juliet of the Spirits. At the end of the day er see a Fellini film, which happens fairly I doubt that many viewers go to films I thanked him, and he said, “Why don’t often, without thinking of what the direc- in order to judge the costumes, but as you go to see the genius who makes my tor said about his designer. J Jerry Coyne The Faith That Dare Not Speak Its Name The case against intelligent design. I. Of Pandas and People evidence.... Intelligent design is an xactly eighty years after By Percival Davis and explanation of the origin of life that the Scopes “monkey trial” Dean H.