Direct Aromatic 18F-Labeling of Highly Reactive Tetrazines for Pretargeted Bioorthogonal PET Imaging
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Konkretisering Af Skybrudsplan Nørrebro
HOVEDRAPPORT KONKRETISERING AF SKYBRUDSPLAN NØRREBRO 2013 DENNE RAPPORT ER UDARBEJDET I SAMARBEJDE MELLEM HOFOR OG KØBENHAVNS KOMMUNE MED BISTAND FRA RAMBØLL A/S KONKRETISERING AF SKYBRUDSPLANEN FOR NØRREBRO-OPLANDET INDHOLD 1. Indledning 1 2. Beskrivelse af skybrudsopland Nørrebro 4 2.1 Områdekarakteristik 5 2.2 Hovedtrafikårer 11 2.3 Faldforhold 12 3. Eksisterende planer for området 14 3.1 Trafikplaner 14 3.2 Lokalplaner 15 3.3 Nye større byggerier 16 4. Vand på terræn – status 19 4.1 Skybrudsoplevelser 19 4.2 Terrænoversvømmelser ved designregn 22 5. Hydraulisk afklaring 26 5.1 Hydraulisk beskrivelse af oplandet 26 6. Mulige løsninger 28 6.1 Hovedgreb - Koncept og strategi 28 6.2 Brug af vejarealer og terræn 33 6.3 Masterplaner til opfyldelse af skybrudsplanernes servicemål 35 6.3.1 Fælles for begge masterplaner 36 6.3.2 Forskelle mellem de to masterplaner 45 6.3.3 Variationsforslag 48 6.4 Hydrauliske beregninger og forudsætninger 50 6.5 Trafik - Skybrudsveje 53 6.5.1 Værktøj til typevalg af skybrudsvej 58 6.5.2 Vejnettets klassificering 60 6.6 Rensning af regnvand 60 6.7 Synergi med LAR 61 6.8 Overslag og vurdering af implementeringstid 62 6.9 Vurdering, fordele og ulemper 62 6.10 Økonomi 62 6.11 Driftsøkonomi 63 6.12 Bidrag til kommunens politikker 64 6.13 Vurdering 66 7. Anbefalinger 67 KONKRETISERING AF SKYBRUDSPLANEN FOR NØRREBRO-OPLANDET BILAG Bilag 1 Baggrundsmateriale Bilag 2 Henvisning til videomateriale Bilag 3 Grundlag for anlægsoverslag Bilag 4 Præsentations- og bilagsmappe KONKRETISERING AF SKYBRUDSPLANEN FOR NØRREBRO-OPLANDET 1 1. INDLEDNING I forbindelse med det meget voldsomme skybrud, der ramte Hovedstaden 2. -
Isonitrile-Responsive and Bioorthogonally Removable Tetrazine Protecting Groups
UCLA UCLA Previously Published Works Title Isonitrile-responsive and bioorthogonally removable tetrazine protecting groups. Permalink https://escholarship.org/uc/item/0hc9j0mv Journal Chemical science, 11(1) ISSN 2041-6520 Authors Tu, Julian Svatunek, Dennis Parvez, Saba et al. Publication Date 2020 DOI 10.1039/c9sc04649f Peer reviewed eScholarship.org Powered by the California Digital Library University of California Chemical Science View Article Online EDGE ARTICLE View Journal | View Issue Isonitrile-responsive and bioorthogonally removable tetrazine protecting groups† Cite this: Chem. Sci., 2020, 11,169 a b c b All publication charges for this article Julian Tu, Dennis Svatunek, Saba Parvez, Hannah J. Eckvahl, have been paid for by the Royal Society Minghao Xu, ‡a Randall T. Peterson,c K. N. Houk b and Raphael M. Franzini *a of Chemistry In vivo compatible reactions have a broad range of possible applications in chemical biology and the pharmaceutical sciences. Here we report tetrazines that can be removed by exposure to isonitriles under very mild conditions. Tetrazylmethyl derivatives are easily accessible protecting groups for amines and phenols. The isonitrile-induced removal is rapid and near-quantitative. Intriguingly, the deprotection is especially effective with (trimethylsilyl)methyl isocyanide, and serum albumin can catalyze the elimination under physiological conditions. NMR and computational studies revealed that an imine-tautomerization step is often rate limiting, and the unexpected cleavage of the Si–C bond accelerates this step in the case with (trimethylsilyl)methyl isocyanide. Tetrazylmethyl-removal is compatible with use on biomacromolecules, in cellular environments, and in living organisms as demonstrated by cytotoxicity Creative Commons Attribution 3.0 Unported Licence. -
Strain-Promoted 1,3-Dipolar Cycloaddition of Cycloalkynes and Organic Azides
Top Curr Chem (Z) (2016) 374:16 DOI 10.1007/s41061-016-0016-4 REVIEW Strain-Promoted 1,3-Dipolar Cycloaddition of Cycloalkynes and Organic Azides 1 1 Jan Dommerholt • Floris P. J. T. Rutjes • Floris L. van Delft2 Received: 24 November 2015 / Accepted: 17 February 2016 / Published online: 22 March 2016 Ó The Author(s) 2016. This article is published with open access at Springerlink.com Abstract A nearly forgotten reaction discovered more than 60 years ago—the cycloaddition of a cyclic alkyne and an organic azide, leading to an aromatic triazole—enjoys a remarkable popularity. Originally discovered out of pure chemical curiosity, and dusted off early this century as an efficient and clean bio- conjugation tool, the usefulness of cyclooctyne–azide cycloaddition is now adopted in a wide range of fields of chemical science and beyond. Its ease of operation, broad solvent compatibility, 100 % atom efficiency, and the high stability of the resulting triazole product, just to name a few aspects, have catapulted this so-called strain-promoted azide–alkyne cycloaddition (SPAAC) right into the top-shelf of the toolbox of chemical biologists, material scientists, biotechnologists, medicinal chemists, and more. In this chapter, a brief historic overview of cycloalkynes is provided first, along with the main synthetic strategies to prepare cycloalkynes and their chemical reactivities. Core aspects of the strain-promoted reaction of cycloalkynes with azides are covered, as well as tools to achieve further reaction acceleration by means of modulation of cycloalkyne structure, nature of azide, and choice of solvent. Keywords Strain-promoted cycloaddition Á Cyclooctyne Á BCN Á DIBAC Á Azide This article is part of the Topical Collection ‘‘Cycloadditions in Bioorthogonal Chemistry’’; edited by Milan Vrabel, Thomas Carell & Floris P. -
Bioorthogonal Chemistry
Bioorthogonal Chemistry Rachel Whittaker February 13, 2013 Wednesday Literature Talk Outline What is It and Why Do We Care? Historical Background Staudinger Ligation Copper-free Click Chemistry Tetrazine Cycloadditions Other Examples Future Directions What Are We Talking About Here? “But what if the challenge [of synthesis] were inverted, wherein the target structure was relatively simple but the environment in which the necessary reactions must proceed was so chemically complex and uncontrollable that no two functional groups could combine reliably and selectively under such conditions?” – Carolyn Bertozzi, UC Berkley Acc. Chem Res., 2011, 44, 651. What Is It? Bioorthogonal chemistry- chemical reactions that neither interact with nor interfere with a biological system. Acc. Chem. Res., 2011, 44, 666. So Why Do We Care? Takes classic organic reactions and redesigns them with biological systems in mind Allows for more efficient/ non-toxic drug delivery, biological imaging, and material science Acc. Chem. Res., 2011, 44, 666. Requirements of Bioorthogonality 1. Functional groups used must be inert to biological moieties 2. FG’s must be selective for one another and nontoxic to organisms 3. Reaction must work in biological media 4. Must have very fast kinetics, particularly at low -4 -1 - concentrations and in physiological condtions (k2> 10 M s 1) 5. Helpful, but not required, if at least one FG is small Acc. Chem. Res., 2011, 44, 666. Types of Bioorthogonal Transformations* 1. Nucleophilic Additions 2. 1,3-Dipolar Cycloadditions -
Københavnske Gader Og Sogne I 1880 RIGSARKIVET SIDE 2
HJÆLPEMIDDEL Københavnske gader og sogne i 1880 RIGSARKIVET SIDE 2 Københavnske gader og sogne Der står ikke i folketællingerne, hvilket kirkesogn de enkelte familier hørte til. Det kan derfor være vanskeligt at vide, i hvilke kirkebøger man skal lede efer en familie, som man har fundet i folketællingen. Rigsarkivet har lavet dette hjælpemiddel, som sikrer, at I som brugere får lettere ved at finde fra folketællingen 1880 over i kirkebøgerne. Numrene i parentes er sognets nummer. RIGSARKIVET SIDE 3 Gader og sogne i København 1880 A-B Gade Sogn Aabenraa .............................................................................. Trinitatis (12) Absalonsgade ....................................................................... Frederiksberg (64) Adelgade ............................................................................... Trinitatis (12) Adelgade ............................................................................... Sankt Pauls (24) Admiralgade ......................................................................... Holmens (21) Ahlefeldtsgade ..................................................................... Sankt Johannes (10) Akacievej .............................................................................. Frederiksberg (64) Alhambravej ......................................................................... Frederiksberg (64) Allégade ................................................................................ Frederiksberg (64) Allersgade............................................................................ -
Helhedsplan for Nørrebrogade Evaluering Af Forsøgsprojekts Trafikale Konsekvenser Rapport
Københavns Kommune Helhedsplan for Nørrebrogade Evaluering af forsøgsprojekts trafikale konsekvenser Rapport December 2008 COWI A/S Parallelvej 2 2800 Kongens Lyngby Telefon 45 97 22 11 Telefax 45 97 22 12 www.cowi.dk Københavns Kommune Helhedsplan for Nørrebrogade Evaluering af forsøgsprojekts trafikale konsekvenser Rapport December 2008 Dokumentnr. P-66794-7-01 Version 1 Udgivelsesdato 8. december 2008 Udarbejdet hgr Kontrolleret ljr Godkendt hgr Helhedsplan for Nørrebrogade - Evaluering af forsøgsprojekts trafikale konsekvenser 1 Indholdsfortegnelse 1 Indledning 2 2 Metode 4 3 Projektet 8 4 Trafikken på det omgivende trafikvejnet 13 5 Trafikken på Nørrebrogade 19 5.1 Biltrafik 19 5.2 Cykeltrafik 23 5.3 Bustrafik 27 5.4 Fodgængere 32 6 Biltrafik på øvrige gader på Nørrebro 33 7 Samlet vurdering 36 \\LYPROJ\Proj\66794A\3_Pdoc\DOC\Trafikal_Evaluering_Vers1.doc . Helhedsplan for Nørrebrogade - Evaluering af forsøgsprojekts trafikale konsekvenser 2 1 Indledning Københavns Kommune er ved at udarbejde en helhedsplan for Nørrebrogade. I 2007-2008 blev der udarbejdet fire forslag til løsningsmodeller og kommunen besluttede medio 2008 at arbejde videre med en første etape af den ene af mo- dellerne, kaldet Løsningsmodel 4. Første trin i dette videre arbejde har været at gennemføre et forsøg, hvor man med midlertidige skilte, anden afmærkning og fysiske ændringer afprøver et projekt, der så godt som muligt skal illustrere den omtalte første etape. Forsøget startede den 1. oktober 2008 og varer året ud. Kommunen har planlagt en evaluering af flere emner. Dette dokument indehol- der resultatet af en evaluering af de trafikale konsekvenser i form af ændringer i trafikmængder og rejsehastigheder samt adfærd på steder, hvor der er sket fysi- ske ændringer. -
The Family Von Mehren
I, Hother von Mehren, have written this family book after a scan and and a photocopy which I received from Pam Alley von Mehren, as well as a scanned copy which I received from the Royal. Library, Copenhagen, which has a copy of the book in their archives. As several of the words were quite indistinct, I have sometimes had to venture a guess what was written. In some cases, it was impossible for me to decipher the writing, as it was written in an old-fashioned typewriter, and some of the letters were completely smeared. What I could not clearly read, are marked in red text. The German phrases I had big problems with, because I'm not very good in understanding the German language. I hope that anyone, who reads this anyway, will get something out of it. The family von Mehren Preliminary results of studies of the genus "von Mehren" s origins, its history, with a short characterization of the members who I have known. Charles H.C.v.Mehren Copenhagen, 1944 This document is an electronic/manual translation from Danish to English by Jacques Andersen, married to Jonna Conny von Mehren. The dates are in Danish format dd/mm/yyyy or mm.dd.yyyy English ormat. 2 The question of my family history and ancestry have already in my younger years had my interest, but so far in my experience, the issue has not previously been the subject of in-depth studies. So far such investigations, if any have been instituted, do not seem to have led to any resolution of the family ancestry, because when I, years ago, before I even started to deal with inquiries in this regard, asked the older members of the family, no one was able to provide information. -
Bioorthogonal Prodrug Activation Driven by a Strain-Promoted 1,3
Bioorthogonal Prodrug Activation Driven by a Strain‐Promoted 1,3‐Dipolar Cycloaddition 1 Siddarth S. Matikonda, Douglas L. Orsi, Verena Staudacher, Imogen A. Jenkins, Franziska Fiedler, Jiayi Chen and Allen B. Gamble Chemical Science, 2015, 6, pp. 1212‐ 1218 (University of Otago, Dunedin, New Zealand) A. Manos‐Turvey, Wipf Group Current Literature February 28th, 2015 Alex Manos-Turvey @ Wipf Group Page 1 of 22 3/14/2015 Prodrugs for Cancer Therapies 2 Non‐selectivity in cancer treatments leads to off‐target side‐effects Prodrug activation is seen as a viable method allowing for direct drug delivery Cleavage of a deactivating linker, leading to activation Can react with off‐target sources due to hydrolysis Antibody‐Drug Conjugates (ADCs) ADCs can elicit an immune system response The linkers need to be fine tuned between stability and “cleavability” Drugs become diluted as this is dependant on cell surface receptors, leading to < potent R.V.J. Chari, M.L. Miller, W.C. Widdison, Angew. Chem., 2014, 53, 3796‐3827 Fig: http://static.cdn‐seekingalpha.com/uploads/2014/1/19447671_13889572897936_1.jpg Alex Manos-Turvey @ Wipf Group Page 2 of 22 3/14/2015 Prodrugs for Cancer Therapies 3 Antibody‐Directed Enzyme Prodrug Therapy (ADEPT) Targets an antibody‐enzyme conjugate to a cancer cell Limited to human enzymes, to avoid anti‐enzyme immune responses K.D. Bagshawe, S.K. Sharma, R.H.J. Begent, Expert Opin. Biol. Ther., 2004, 4, 1777‐1789 K.‐C. Chen, S.‐Y. Wu, Y.‐L. Leu, Z.M. Prijovich, B.‐M. Chen, H.‐E. Wang, T.‐L. Cheng, S.R. Roffler, Bioconjugate Chem., 2011, 22, 938‐948 Alex Manos-Turvey @ Wipf Group Page 3 of 22 3/14/2015 Prodrugs for Cancer Therapies 4 Bioorthogonal Chemistry Not many examples for in vitro prodrug activation Staudinger and tetrazine‐TCO (Inverse‐Electron‐Demand Diels‐Alder Cycloadditions) reactions have been used. -
Nørrebro Tour a Livable & Sustainable Neighborhood?
Nørrebro Tour A livable & Sustainable Neighborhood?ROVSINGSGADE VERMUNDSGADE ALDERSROGADE g)Nørrebropark/ ROVSINGSGADE h)BanannaPark Superkilen HARALDSGADE This local neighborhood park has since its opening in 2009 found international NørrebroPark: Walk through this park. TAGENSVEJ interest. This park has become perticularly well recieved by local users. We nd a Notice the greenery, aesthetics and visual MJØLNERPARKEN very high amount of daily users. The three surrounding institutions (day-care, identity. Does this park correspond with grade school and after school activity center) use the park as their extended the demoraphics of the people using it? SKJOLDS schoolyard/gym/playground. Note the functions/programs of the park. Notice Which elements of the park stand out to PLADS the interaction/overlapping of the programs and thus also the user goups. Does you? Why? overlap of programs promote social interaction across user goups? Does diver- Superkilen: Continue across Hillerødgade sity of activity promote user goup diversity? Notice the visual identity of the and Nørrebrogade. You will get to a red HEIMDALSGADE park. Notice the surrounding windows, the park has 24-7 ’natural surveillance’ HERMODSGADE thermo-plast square; this is Red Square. JAGTVEJ (Jane RÅDMANDSGADEJacobs term). Note if the kids are accompanied by parents or on their Notice the urban furniture and the BORGMESTERVANGEN own? Does it feel safe? Does it feel livable? Can you tell this use to be a gang design of the square. Notice the peole and dealer hot spot? Would you consider this gentried or livable? HAMLETSGADE using it; is there social interaction bet- ween people? Continue further on to LYNGSIES Black Square. -
Development of Bioorthogonal Reactions and Their Applications in Bioconjugation
Molecules 2015, 20, 3190-3205; doi:10.3390/molecules20023190 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Review Development of Bioorthogonal Reactions and Their Applications in Bioconjugation Mengmeng Zheng, Li Zheng, Peiyuan Zhang, Jinbo Li * and Yan Zhang * Institute of Chemistry & BioMedical Sciences, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093, China; E-Mails: [email protected] (M.Z.); [email protected] (L.Z.); [email protected] (P.Z.) * Authors to whom correspondence should be addressed; E-Mails: [email protected] (J.L.); [email protected] (Y.Z.); Tel.: +86-25-8968-1327 (J.L.); +86-25-8359-3072 (Y.Z.); Fax: +86-25-8368-5976 (J.L. & Y.Z.). Academic Editor: Scott Reed Received: 5 January 2015 / Accepted: 2 February 2015 / Published: 16 February 2015 Abstract: Biomolecule labeling using chemical probes with specific biological activities has played important roles for the elucidation of complicated biological processes. Selective bioconjugation strategies are highly-demanded in the construction of various small-molecule probes to explore complex biological systems. Bioorthogonal reactions that undergo fast and selective ligation under bio-compatible conditions have found diverse applications in the development of new bioconjugation strategies. The development of new bioorthogonal reactions in the past decade has been summarized with comments on their potentials as bioconjugation method in the construction of various biological probes for investigating their target biomolecules. For the applications of bioorthogonal reactions in the site-selective biomolecule conjugation, examples have been presented on the bioconjugation of protein, glycan, nucleic acids and lipids. Keywords: bioorthogonal reactions; bioconjugation strategies; biomolecules; chemical probes 1. -
Applications of Azide-Based Bioorthogonal Click Chemistry in Glycobiology
Molecules 2013, 18, 7145-7159; doi:10.3390/molecules18067145 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Review Applications of Azide-Based Bioorthogonal Click Chemistry in Glycobiology Xiu Zhang and Yan Zhang * Ministry of Education Key Laboratory of Systems Biomedicine, Shanghai Center for Systems Biomedicine (SCSB), Shanghai Jiao Tong University, 800 Dong Chuan Road, Minhang, Shanghai 200240, China; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel./Fax: +86-21-3420-6778. Received: 20 May 2013; in revised form: 12 June 2013 / Accepted: 14 June 2013 / Published: 19 June 2013 Abstract: Click chemistry is a powerful chemical reaction with excellent bioorthogonality features: biocompatible, rapid and highly specific in biological environments. For glycobiology, bioorthogonal click chemistry has created a new method for glycan non-invasive imaging in living systems, selective metabolic engineering, and offered an elite chemical handle for biological manipulation and glycomics studies. Especially the [3 + 2] dipolar cycloadditions of azides with strained alkynes and the Staudinger ligation of azides and triarylphosphines have been widely used among the extant click reactions. This review focuses on the azide-based bioorthogonal click chemistry, describing the characteristics and development of these reactions, introducing some recent applications in glycobiology research, especially in glycan metabolic engineering, including glycan non-invasive imaging, glycomics studies and viral surface manipulation for drug discovery as well as other applications like activity-based protein profiling and carbohydrate microarrays. Keywords: click chemistry; azide; bioorthogonal; glycosylation; glycobiology 1. Introduction Glycosylation, the most complex and ubiquitous post-translational modification, is involved in a number of physiological and pathological processes. -
14 Bus Køreplan & Linjerutekort
14 bus køreplan & linjemap 14 Ryparken (Rymarksvej) - Nørreport St. (Nørre Se I Webstedsmodus Voldgade) 14 bus linjen (Ryparken (Rymarksvej) - Nørreport St. (Nørre Voldgade)) har 2 ruter. på almindelige hverdage er deres kørselstider: (1) Nørreport St.: 00:08 - 23:48 (2) Østerbro Ryparken: 00:15 - 23:55 Brug Moovit Appen til at ƒnde den nærmeste 14 bus station omkring dig og ƒnde ud af, hvornår næste 14 bus ankommer. Retning: Nørreport St. 14 bus køreplan 27 stop Nørreport St. Rute køreplan: SE LINJEKØREPLAN mandag 04:44 - 23:48 tirsdag 00:08 - 23:48 Ryparken (Rymarksvej) Rymarksvej, Copenhagen onsdag 00:08 - 23:48 Gartnerivej (Ryparken) torsdag 00:08 - 23:48 Ryparken 35, Copenhagen fredag 00:08 - 23:48 Emdrupvej (Lyngbyvej) lørdag 00:08 - 23:48 Lyngbyvej 147, Copenhagen søndag 00:08 - 23:48 Ryparken St. (Lyngbyvej) Hans Knudsens Plads (Lyngbyvej) Lyngbyvej 89, Copenhagen 14 bus information Lyngbyvej (Haraldsgade) Retning: Nørreport St. Haraldsgade 110, Copenhagen Stoppesteder: 27 Turvarighed: 33 min Haraldsgade (Lersø Parkallé) Linjeoversigt: Ryparken (Rymarksvej), Gartnerivej Lersø Parkallé 67, Copenhagen (Ryparken), Emdrupvej (Lyngbyvej), Ryparken St. (Lyngbyvej), Hans Knudsens Plads (Lyngbyvej), Aldersrogade (Lersø Parkallé) Lyngbyvej (Haraldsgade), Haraldsgade (Lersø Lersø Parkallé 47, Copenhagen Parkallé), Aldersrogade (Lersø Parkallé), Universitetsparken (Jagtvej), Vibenshus Runddel St. Universitetsparken (Jagtvej) (Jagtvej), Serridslevvej (Jagtvej), Poul Henningsens Jagtvej 160, Copenhagen Plads St. (Strandboulevarden), Svendborggade