Terrestrial Fauna Biodiversity Assessment for The
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Freshwater Fishes
WESTERN CAPE PROVINCE state oF BIODIVERSITY 2007 TABLE OF CONTENTS Chapter 1 Introduction 2 Chapter 2 Methods 17 Chapter 3 Freshwater fishes 18 Chapter 4 Amphibians 36 Chapter 5 Reptiles 55 Chapter 6 Mammals 75 Chapter 7 Avifauna 89 Chapter 8 Flora & Vegetation 112 Chapter 9 Land and Protected Areas 139 Chapter 10 Status of River Health 159 Cover page photographs by Andrew Turner (CapeNature), Roger Bills (SAIAB) & Wicus Leeuwner. ISBN 978-0-620-39289-1 SCIENTIFIC SERVICES 2 Western Cape Province State of Biodiversity 2007 CHAPTER 1 INTRODUCTION Andrew Turner [email protected] 1 “We live at a historic moment, a time in which the world’s biological diversity is being rapidly destroyed. The present geological period has more species than any other, yet the current rate of extinction of species is greater now than at any time in the past. Ecosystems and communities are being degraded and destroyed, and species are being driven to extinction. The species that persist are losing genetic variation as the number of individuals in populations shrinks, unique populations and subspecies are destroyed, and remaining populations become increasingly isolated from one another. The cause of this loss of biological diversity at all levels is the range of human activity that alters and destroys natural habitats to suit human needs.” (Primack, 2002). CapeNature launched its State of Biodiversity Programme (SoBP) to assess and monitor the state of biodiversity in the Western Cape in 1999. This programme delivered its first report in 2002 and these reports are updated every five years. The current report (2007) reports on the changes to the state of vertebrate biodiversity and land under conservation usage. -
Squamata: Lacertidae)
UNIVERSITY OF CALIFORNIA SANTA CRUZ EVOLUTIONARY CONSEQUENCES OF CENOZOIC CLIMATE CHANGE ON AFRICAN LACERTID LIZARDS (SQUAMATA: LACERTIDAE) A dissertation submitted in partial satisfaction of the requirements for the degree of DOCTOR OF PHILOSOPHY in ECOLOGY AND EVOLUTIONARY BIOLOGY by Christy A. Hipsley September 2012 The Dissertation of Christy Hipsley is approved: _________________________________ Professor Barry Sinervo, Chair _________________________________ Professor Giacomo Bernardi _________________________________ Professor Johannes Müller _________________________________ Tyrus Miller Vice Provost and Dean of Graduate Studies Copyright © by Christy A. Hipsley 2012 TABLE OF CONTENTS LIST OF TABLES AND FIGURES …………………………………………………………. v ABSTRACT ……………………………………………………………………………… vii ACKNOWLEDGEMENTS ………………………………………………………………… ix INTRODUCTION ……………………………………………………………………..……. 1 CHAPTER 1. INTEGRATION OF BAYESIAN MOLECULAR CLOCK METHODS AND FOSSIL-BASED SOFT BOUNDS REVEALS EARLY CENOZOIC ORIGIN OF AFRICAN LACERTIDS LIZARDS…………………………………………………………………… 9 Abstract ………………………………………………………………………… 9 Background …………………………………………………………………….. 10 Methods ………………………………………………………………………… 11 Results ……………………………………………………….…………………. 13 Discussion………………………………………………………….………………16 CHAPTER 2. MORPHOLOGICAL CONVERGENCE IN ARID-DWELLING AFRICAN LACERTID LIZARDS DRIVEN BY ECOLOGICAL AND CLIMATIC FACTORS………………. 22 Abstract ………………………………………………………………………... 22 Introduction ……………………………………………………………………. 23 Materials and Methods ………………………………………………………… 26 Results ……………………………………………………………………..…… -
Literature Cited in Lizards Natural History Database
Literature Cited in Lizards Natural History database Abdala, C. S., A. S. Quinteros, and R. E. Espinoza. 2008. Two new species of Liolaemus (Iguania: Liolaemidae) from the puna of northwestern Argentina. Herpetologica 64:458-471. Abdala, C. S., D. Baldo, R. A. Juárez, and R. E. Espinoza. 2016. The first parthenogenetic pleurodont Iguanian: a new all-female Liolaemus (Squamata: Liolaemidae) from western Argentina. Copeia 104:487-497. Abdala, C. S., J. C. Acosta, M. R. Cabrera, H. J. Villaviciencio, and J. Marinero. 2009. A new Andean Liolaemus of the L. montanus series (Squamata: Iguania: Liolaemidae) from western Argentina. South American Journal of Herpetology 4:91-102. Abdala, C. S., J. L. Acosta, J. C. Acosta, B. B. Alvarez, F. Arias, L. J. Avila, . S. M. Zalba. 2012. Categorización del estado de conservación de las lagartijas y anfisbenas de la República Argentina. Cuadernos de Herpetologia 26 (Suppl. 1):215-248. Abell, A. J. 1999. Male-female spacing patterns in the lizard, Sceloporus virgatus. Amphibia-Reptilia 20:185-194. Abts, M. L. 1987. Environment and variation in life history traits of the Chuckwalla, Sauromalus obesus. Ecological Monographs 57:215-232. Achaval, F., and A. Olmos. 2003. Anfibios y reptiles del Uruguay. Montevideo, Uruguay: Facultad de Ciencias. Achaval, F., and A. Olmos. 2007. Anfibio y reptiles del Uruguay, 3rd edn. Montevideo, Uruguay: Serie Fauna 1. Ackermann, T. 2006. Schreibers Glatkopfleguan Leiocephalus schreibersii. Munich, Germany: Natur und Tier. Ackley, J. W., P. J. Muelleman, R. E. Carter, R. W. Henderson, and R. Powell. 2009. A rapid assessment of herpetofaunal diversity in variously altered habitats on Dominica. -
History and Function of Scale Microornamentation in Lacertid Lizards
JOURNALOFMORPHOLOGY252:145–169(2002) HistoryandFunctionofScaleMicroornamentation inLacertidLizards E.N.Arnold* NaturalHistoryMuseum,CromwellRoad,LondonSW75BD,UK ABSTRACTDifferencesinsurfacestructure(ober- mostfrequentlyinformsfromdryhabitatsorformsthat hautchen)ofbodyscalesoflacertidlizardsinvolvecell climbinvegetationawayfromtheground,situations size,shapeandsurfaceprofile,presenceorabsenceoffine wheredirtadhesionislessofaproblem.Microornamen- pitting,formofcellmargins,andtheoccurrenceoflongi- tationdifferencesinvolvingotherpartsofthebodyand tudinalridgesandpustularprojections.Phylogeneticin- othersquamategroupstendtocorroboratethisfunctional formationindicatesthattheprimitivepatterninvolved interpretation.Microornamentationfeaturescandevelop narrowstrap-shapedcells,withlowposteriorlyoverlap- onlineagesindifferentordersandappeartoactadditively pingedgesandrelativelysmoothsurfaces.Deviations inreducingshine.Insomecasesdifferentcombinations fromthisconditionproduceamoresculpturedsurfaceand maybeoptimalsolutionsinparticularenvironments,but havedevelopedmanytimes,althoughsubsequentovert lineageeffects,suchaslimitedreversibilityanddifferent reversalsareuncommon.Likevariationsinscaleshape, developmentalproclivities,mayalsobeimportantintheir differentpatternsofdorsalbodymicroornamentationap- peartoconferdifferentandconflictingperformancead- genesis.Thefinepitsoftenfoundoncellsurfacesare vantages.Theprimitivepatternmayreducefrictiondur- unconnectedwithshinereduction,astheyaresmaller inglocomotionandalsoenhancesdirtshedding,especially thanthewavelengthsofmostvisiblelight.J.Morphol. -
Reptiles and Amphibians of the Goegap Nature Reserve
their time underground in burrows. These amphibians often leave their burrows after heavy rains that are seldom. Reptiles And Amphibians Of The There are reptiles included in this report, which don’t occur here in Goegap but at the Augrabies Falls NP. So you can find here also the Nile monitor and the flat liz- Goegap Nature Reserve ard. Measuring reptiles By Tanja Mahnkopf In tortoises and terrapins the length is measured at the shell. Straight along the mid- line of the carapace. The SV-Length is the length of head and body (Snout to Vent). In lizards it easier to look for this length because their tail may be a regenerated one Introduction and these are often shorter than the original one. The length that is mentioned for the The reptiles are an ancient class on earth. The earliest reptile fossils are about 315 species in this report is the average to the maximum length. For the snakes I tried to million years old. During the aeons of time they evolved a great diversity of extinct give the total length because it is often impossible to say where the tail begins and and living reptiles. The dinosaurs and their relatives dominated the earth 150 million the body ends without holding the snake. But there was not for every snake a total years ago. Our living reptiles are remnants of that period or from a period after the length available. dinosaurs were extinct. Except of the chameleons (there are only two) you can find all reptiles in the appen- Obviously it looks like reptiles are not as successful as mammals. -
Early German Herpetological Observations and Explorations in Southern Africa, with Special Reference to the Zoological Museum of Berlin
Bonner zoologische Beiträge Band 52 (2003) Heft 3/4 Seiten 193–214 Bonn, November 2004 Early German Herpetological Observations and Explorations in Southern Africa, With Special Reference to the Zoological Museum of Berlin Aaron M. BAUER Department of Biology, Villanova University, Villanova, Pennsylvania, USA Abstract. The earliest herpetological records made by Germans in southern Africa were casual observations of common species around Cape Town made by employees of the Dutch East India Company (VOC) during the mid- to late Seven- teenth Century. Most of these records were merely brief descriptions or lists of common names, but detailed illustrations of many reptiles were executed by two German illustrators in the employ of the VOC, Heinrich CLAUDIUS and Johannes SCHUMACHER. CLAUDIUS, who accompanied Simon VAN DER STEL to Namaqualand in 1685, left an especially impor- tant body of herpetological illustrations which are here listed and identified to species. One of the last Germans to work for the Dutch in South Africa was Martin Hinrich Carl LICHTENSTEIN who served as a physician and tutor to the last Dutch governor of the Cape from 1802 to 1806. Although he did not collect any herpetological specimens himself, LICHTENSTEIN, who became the director of the Zoological Museum in Berlin in 1813, influenced many subsequent workers to undertake employment and/or expeditions in southern Africa. Among the early collectors were Karl BERGIUS and Ludwig KREBS. Both collected material that is still extant in the Berlin collection today, including a small number of reptile types. Because of LICHTENSTEIN’S emphasis on specimens as items for sale to other museums rather than as subjects for study, many species first collected by KREBS were only described much later on the basis of material ob- tained by other, mostly British, collectors. -
Annotated Checklist and Provisional Conservation Status of Namibian Reptiles
Annotated Checklist - Reptiles Page 1 ANNOTATED CHECKLIST AND PROVISIONAL CONSERVATION STATUS OF NAMIBIAN REPTILES MICHAEL GRIFFIN BIODIVERSITY INVENTORY MINISTRY OF ENVIRONMENT AND TOURISM PRIVATE BAG 13306 WINDHOEK NAMIBIA Annotated Checklist - Reptiles Page 2 Annotated Checklist - Reptiles Page 3 CONTENTS PAGE ABSTRACT 5 INTRODUCTION 5 METHODS AND DEFINITIONS 6 SPECIES ACCOUNTS Genus Crocodylus Nile Crocodile 11 Pelomedusa Helmeted Terrapin 11 Pelusios Hinged Terrapins 12 Geochelone Leopard Tortoise 13 Chersina Bowsprit Tortoise 14 Homopus Nama Padloper 14 Psammobates Tent Tortoises 15 Kinixys Hinged Tortoises 16 Chelonia GreenTurtle 16 Lepidochelys Olive Ridley Turtle 17 Dermochelys Leatherback Turtle 17 Trionyx African Soft-shelled Turtle 18 Afroedura Flat Geckos 19 Goggia Dwarf Leaf-toed Geckos 20 Afrogecko Marbled Leaf-toed Gecko 21 Phelsuma Namaqua Day Gecko 22 Lygodactylus Dwarf Geckos 23 Rhoptropus Namib Day Geckos 25 Chondrodactylus Giant Ground Gecko 27 Colopus Kalahari Ground Gecko 28 Palmatogecko Web-footed Geckos 28 Pachydactylus Thick-toed Geckos 29 Ptenopus Barking Geckos 39 Narudasia Festive Gecko 41 Hemidactylus Tropical House Geckos 41 Agama Ground Agamas 42 Acanthocercus Tree Agama 45 Bradypodion Dwarf Chameleons 46 Chamaeleo Chameleons 47 Acontias Legless Skinks 48 Typhlosaurus Blind Legless Skinks 48 Sepsina Burrowing Skinks 50 Scelotes Namibian Dwarf Burrowing Skink 51 Typhlacontias Western Burrowing Skinks 51 Lygosoma Sundevall’s Writhing Skink 53 Mabuya Typical Skinks 53 Panaspis Snake-eyed Skinks 60 Annotated -
Part A: Details of Applicant
ANNEXURE 1 FORMS Form 1 REPUBLIC OF NAMIBIA ENVIRONMENTAL MANAGEMENT ACT, 2007 (Section 32) APPLICATION FOR ENVIRONMENTAL CLEARANCE CERTIFICATE Revenue stamp Revenue stamp Revenue stamp or revenue or revenue or revenue franking franking franking machine machine machine impression impression impression PART A: DETAILS OF APPLICANT Name :(person or business) : Pure Tantalum (Pty) L td Business Registration/Identity No . (if applicable) Correspondence Address : P.O. Box 68 Uis Namibia Name of Contact Person: Pieter. H Position of Contact Person: Telephone No: +2 64 61 402246 Fax No: E - mail Address: [email protected] Tick the appropriate box PART B. SCOPE OF THE ENVIRONMENTAL CLEARANCE CERTIFICATE 1. The environmental clearance certificate is for: T he exploration activities on exclusive prospecting license ( EPL ) 7004 in Dorob National Park, Erongo region. 2. Details of the activity(s) covered by the environmental clearance certificate : [Note: Please attach plans to show the location and scope of the designated activity(s ), and use additional sheets if ne cessary: Title of Activity: E xploration activities on exclusive pr ospecting license (EPL) 7004 in Dorob National Park, Erongo region Nature of Activity : T he exploration activities on exclusive prospecting license (EPL) 7004 in Dorob National Park, Erongo region. The project activities will involve mapping , drilling and sampling of Base and Rare metals, 1. Name of current holder of Environmental Clearance Certificate: Industrial Minerals , Non Nuclear Fuel Minerals and Precious metals. Location of Activity: EPL 7004 in Dorob National Park , Erongo Region Scale and Scope of Activity: Exploration activities of Base and Rare Metals, Industrial Minerals, Non - Nuclear Fuel Minerals and Precious Metals on EPL 7004, area size of 1796.3841 Hectares . -
A Phylogeny and Revised Classification of Squamata, Including 4161 Species of Lizards and Snakes
BMC Evolutionary Biology This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes BMC Evolutionary Biology 2013, 13:93 doi:10.1186/1471-2148-13-93 Robert Alexander Pyron ([email protected]) Frank T Burbrink ([email protected]) John J Wiens ([email protected]) ISSN 1471-2148 Article type Research article Submission date 30 January 2013 Acceptance date 19 March 2013 Publication date 29 April 2013 Article URL http://www.biomedcentral.com/1471-2148/13/93 Like all articles in BMC journals, this peer-reviewed article can be downloaded, printed and distributed freely for any purposes (see copyright notice below). Articles in BMC journals are listed in PubMed and archived at PubMed Central. For information about publishing your research in BMC journals or any BioMed Central journal, go to http://www.biomedcentral.com/info/authors/ © 2013 Pyron et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes Robert Alexander Pyron 1* * Corresponding author Email: [email protected] Frank T Burbrink 2,3 Email: [email protected] John J Wiens 4 Email: [email protected] 1 Department of Biological Sciences, The George Washington University, 2023 G St. -
Johan Marais
AFRICAN SNAKEBITE INSTITUTE – Johan Marais Checklist of Reptiles in Southern Africa Scientific Name Common Name Afrikaans Common Name Afroedura africana Damara Flat Gecko Damara Platgeitjie Afroedura amatolica Amatola Flat Gecko Amatola Platgeitjie Afroedura bogerti Bogert's Flat Gecko Bogert se Platgeitjie Afroedura broadleyi Broadley’s Flat Gecko Broadley se Platgeitjie Afroedura gorongosa Gorongosa Flat Gecko Gorongosa Platgeitjie Afroedura granitica Lillie Flat Gecko Lillie Platgeitjie Afroedura haackei Haacke's Flat Gecko Haacke se Platgeitjie Afroedura halli Hall's Flat Gecko Hall se Platgeitjie Afroedura hawequensis Hawequa Flat Gecko Hawequa se Platgeitjie Afroedura karroica Karoo Flat Gecko Karoo Platgeitjie Afroedura langi Lang's Flat Gecko Lang se Platgeitjie Afroedura leoloensis Sekhukhuneland Flat Gecko Sekhukhuneland Platgeitjie Afroedura loveridgei Loveridge's Flat Gecko Loveridge se Platgeitjie Afroedura major Swazi Flat Gecko Swazi Platgeitjie Afroedura maripi Mariepskop Flat Gecko Mariepskop Platgeitjie Afroedura marleyi Marley's Flat Gecko Marley se Platgeitjie Afroedura multiporis Woodbush Flat Gecko Woodbush Platgeijtie Afroedura namaquensis Namaqua Flat Gecko Namakwa Platgeitjie Afroedura nivaria Drakensberg Flat Gecko Drakensberg Platgeitjie Afroedura pienaari Pienaar’s Flat Gecko Pienaar se Platgeitjie Afroedura pondolia Pondo Flat Gecko Pondo Platgeitjie Afroedura pongola Pongola Flat Gecko Pongola Platgeitjie Afroedura rupestris Abel Erasmus Flat Gecko Abel Erasmus platgeitjie Afroedura rondavelica Blyde River -
Patterns of Species Richness, Endemism and Environmental Gradients of African Reptiles
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Patterns of species richness, endemism ARTICLE and environmental gradients of African reptiles Amir Lewin1*, Anat Feldman1, Aaron M. Bauer2, Jonathan Belmaker1, Donald G. Broadley3†, Laurent Chirio4, Yuval Itescu1, Matthew LeBreton5, Erez Maza1, Danny Meirte6, Zoltan T. Nagy7, Maria Novosolov1, Uri Roll8, 1 9 1 1 Oliver Tallowin , Jean-Francßois Trape , Enav Vidan and Shai Meiri 1Department of Zoology, Tel Aviv University, ABSTRACT 6997801 Tel Aviv, Israel, 2Department of Aim To map and assess the richness patterns of reptiles (and included groups: Biology, Villanova University, Villanova PA 3 amphisbaenians, crocodiles, lizards, snakes and turtles) in Africa, quantify the 19085, USA, Natural History Museum of Zimbabwe, PO Box 240, Bulawayo, overlap in species richness of reptiles (and included groups) with the other ter- Zimbabwe, 4Museum National d’Histoire restrial vertebrate classes, investigate the environmental correlates underlying Naturelle, Department Systematique et these patterns, and evaluate the role of range size on richness patterns. Evolution (Reptiles), ISYEB (Institut Location Africa. Systematique, Evolution, Biodiversite, UMR 7205 CNRS/EPHE/MNHN), Paris, France, Methods We assembled a data set of distributions of all African reptile spe- 5Mosaic, (Environment, Health, Data, cies. We tested the spatial congruence of reptile richness with that of amphib- Technology), BP 35322 Yaounde, Cameroon, ians, birds and mammals. We further tested the relative importance of 6Department of African Biology, Royal temperature, precipitation, elevation range and net primary productivity for Museum for Central Africa, 3080 Tervuren, species richness over two spatial scales (ecoregions and 1° grids). We arranged Belgium, 7Royal Belgian Institute of Natural reptile and vertebrate groups into range-size quartiles in order to evaluate the Sciences, OD Taxonomy and Phylogeny, role of range size in producing richness patterns. -
Universidade De Évora
UNIVERSIDADE DE ÉVORA ESCOLA DE CIÊNCIAS E TECNOLOGIAS DEPARTAMENTO DE BIOLOGIA Nomenclatura e Conservação: um caso de estudo baseado nos taxa descritos por naturalistas Portugueses Francisco Miguel Gomes Calado Orientação: Diogo Francisco Caeiro Figueiredo Luís Miguel Pires Ceríaco Mestrado em Biologia da Conservação Dissertação Évora, 2015 1 2 UNIVERSIDADE DE ÉVORA ESCOLA DE CIÊNCIAS E TECNOLOGIAS DEPARTAMENTO DE BIOLOGIA Nomenclatura e Conservação: um caso de estudo baseado nos taxa descritos por naturalistas Portugueses Francisco Miguel Gomes Calado Orientação: Diogo Francisco Caeiro Figueiredo Luís Miguel Pires Ceríaco Mestrado em Biologia da Conservação Dissertação Évora, 2015 3 4 Nomenclature and Conservation: a case study based on taxa described by Portuguese naturalists Abstract Natural history collections hold one of the biggest repositories of worldwide biodiversity containing specimens that were used for the description of several taxa, the type specimens. Due to the severe threats that biodiversity encounters today natural history collections and the data they provide, have now a renewed interest. The collections of Nacional Museum of Lisbon were lost in a fire in 1978 with the loss of the type specimens collected from the centuries XVIII and XIX. Many of these collections still remain in the institutions to where they were sent making them the last remnants of the Lisbon musicological collections. Consulting the (AHMB) that survived the fire, has the objective of following the zoological scattering of the Lisbon Museum collections and their type specimens. This study has two main goals: 1) Contribute to its musiological valorization and with its data upgrading and increasing the biological information from poorly explored locations; 2) Provide a useful list of the musiological transferences from Museu Bocage and the possible type specimens that taxonomists and the rest of the scientific community can use to solve taxonomic problems that will have conservation implications.