Beyond Reduction and Pluralism: Toward an Epistemology of Explanatory Integration in Biology
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Natural Kinds and Concepts: a Pragmatist and Methodologically Naturalistic Account
Natural Kinds and Concepts: A Pragmatist and Methodologically Naturalistic Account Ingo Brigandt Abstract: In this chapter I lay out a notion of philosophical naturalism that aligns with prag- matism. It is developed and illustrated by a presentation of my views on natural kinds and my theory of concepts. Both accounts reflect a methodological naturalism and are defended not by way of metaphysical considerations, but in terms of their philosophical fruitfulness. A core theme is that the epistemic interests of scientists have to be taken into account by any natural- istic philosophy of science in general, and any account of natural kinds and scientific concepts in particular. I conclude with general methodological remarks on how to develop and defend philosophical notions without using intuitions. The central aim of this essay is to put forward a notion of naturalism that broadly aligns with pragmatism. I do so by outlining my views on natural kinds and my account of concepts, which I have defended in recent publications (Brigandt, 2009, 2010b). Philosophical accounts of both natural kinds and con- cepts are usually taken to be metaphysical endeavours, which attempt to develop a theory of the nature of natural kinds (as objectively existing entities of the world) or of the nature of concepts (as objectively existing mental entities). However, I shall argue that any account of natural kinds or concepts must an- swer to epistemological questions as well and will offer a simultaneously prag- matist and naturalistic defence of my views on natural kinds and concepts. Many philosophers conceive of naturalism as a primarily metaphysical doc- trine, such as a commitment to a physicalist ontology or the idea that humans and their intellectual and moral capacities are a part of nature. -
History of Philosophymetaphysics & Epistem Ology Norm Ative
HistoryPhilosophy of MetaphysicsEpistemology & NormativePhilosophy Azzouni, Jody 114 Topics in Logic: Quine from Early to Late with Smith 120 Metaphysics 131 Epistemology 191 Objects 191 Rule-Following and Metaphysical Realism 191 Truth 191 Quine with McConnell 191 Philosophy of Mathematics 192 The Phenomenology of Public Language 195 Chomsky with McConnell 292 Advanced Epistemology Bauer, Nancy 186 Phenomenology & Existentialism 191 Feminist Philosophy 192 Simone de Beauvoir Baz, Avner 121 Ethical Theory 186 Phenomenology & Existentialism 192 Merleau Ponty Phenomenology 192 The Legacy of Thompson Clarke 192 Wittgenstein's Philosophical Investigations 292 Perceptions & Indeterminacy 292 Research Seminar on Philosophical Method Choi, Yoon 117 Philosophy of Mind 164 Kant's Critique of Pure Reason 192 Kant's Moral Philosophy Cohen, Michael 192 Conciousness Explored: The neurobiology and with Dennett philosophy of the human mind De Caro, Mario 152 History of Modern Philosophy De HistoryPhilosophy of MetaphysicsEpistemology & NormativePhilosophy Car 191 Nature & Norms 191 Free Will & Moral Responsibility Denby, David 133 Philosophy of Language 152 History of Modern Philosophy 191 History of Analytic Philosophy 191 Topics in Metaphysics 195 The Philosophy of David Lewis Dennett, Dan 191 Foundations of Cognitive Science 192 Artificial Agents & Autonomy with Scheutz 192 Cultural Evolution-Is it Darwinian 192 Topics in Philosophy of Biology: The Boundaries with Forber of Darwinian Theory 192 Evolving Minds: From Bacteria to Bach 192 Conciousness -
From Developmental Constraint to Evolvability
From Developmental Constraint to Evolvability How Concepts Figure in Explanation and Disciplinary Identity Ingo Brigandt Department of Philosophy, University of Alberta 2-40 Assiniboia Hall, Edmonton, AB T6G2E7, Canada [email protected] Abstract The concept of developmental constraint was at the heart of develop- mental approaches to evolution of the 1980s. While this idea was widely used to criticize neo-Darwinian evolutionary theory, critique does not yield an alternative framework that offers evolutionary explanations. In current Evo-devo the concept of constraint is of minor importance, whereas notions as evolvability are at the center of attention. The latter clearly defines an explanatory agenda for evolution- ary research, so that one could view the historical shift from ‘developmental con- straint’ towards ‘evolvability’ as the move from a concept that is a mere tool of criticism to a concept that establishes a positive explanatory project. However, by taking a look at how the concept of constraint was employed in the 1980s, I argue that developmental constraint was not just seen as restricting possibilities (‘con- straining’), but also as facilitating morphological change in several ways. Ac- counting for macroevolutionary transformation and the origin of novel form was an aim of these developmental approaches to evolution. Thus, the concept of de- velopmental constraint was part of a positive explanatory agenda long before the advent of Evo-devo as a genuine scientific discipline. In the 1980s, despite the lack of a clear disciplinary identity, this concept coordinated research among pale- ontologists, morphologists, and developmentally inclined evolutionary biologists. I discuss the different functions that scientific concepts can have, highlighting that instead of classifying or explaining natural phenomena, concepts such as ‘devel- opmental constraint’ and ‘evolvability’ are more important in setting explanatory agendas so as to provide intellectual coherence to scientific approaches. -
Articles Revisiting the Logical Empiricist Criticisms of Vitalism Bohang Chen1 Abstract
Revisiting the Logical Empiricist Criticisms of Vitalism Bohang Chen Transversal: International Journal for the Historiography of Science 2019 (7): 1-17 ISSN 2526-2270 www.historiographyofscience.org Belo Horizonte – MG / Brazil © The Author 2019 – This is an open access article Articles Revisiting the Logical Empiricist Criticisms of Vitalism Bohang Chen1 Abstract: Vitalism claims that biological organisms are governed by nonmaterial agents like entelechies. The received view today rejects vitalism by presupposing metaphysical materialism (or physicalism). Metaphysical materialism maintains that the world is ultimately material (or physical), and it, therefore, repudiates the existence of nonmaterial entelechies. However, this marks a shift compared with the arguments against vitalism developed by logical empiricists, who were indifferent to metaphysical issues and were only concerned with logical and empirical matters in the sciences. Logical empiricists rejected the concept of the entelechy (vitalism), because vital laws confirmed by biological phenomena were unavailable; in contrast, they accepted the concept of the atom (materialism), since it constituted physical laws and was therefore associated with verifiable results in modern physics. 1 Keywords: Vitalism; Materialism (or Physicalism); Logical Empiricism; Entelechy; Atom Received: 27 June 2019. Reviewed: 13 October 2019. Accepted: 17 October 2019. DOI: http://dx.doi.org/10.24117/2526-2270.2019.i7.03 This work is licensed under a Creative Commons Attribution 4.0 International License. _______________________________________________________________________ Introduction: The Metaphysical Refutation of Vitalism Today most biologists and philosophers understand vitalism as a heretical doctrine in the history of biology, originally proposed by Hans Driesch in the early twentieth century. 2 According to Driesch’s doctrine of vitalism, biological organisms are governed by nonmaterial vital agents termed entelechies (Driesch 1929; Churchill 1969; Allen 2008). -
Conceptual Engineering and Conceptual Ethics OUP CORRECTED PROOF – FINAL, 17/12/2019, Spi OUP CORRECTED PROOF – FINAL, 17/12/2019, Spi
OUP CORRECTED PROOF – FINAL, 17/12/2019, SPi Conceptual Engineering and Conceptual Ethics OUP CORRECTED PROOF – FINAL, 17/12/2019, SPi OUP CORRECTED PROOF – FINAL, 17/12/2019, SPi Conceptual Engineering and Conceptual Ethics Alexis Burgess, Herman Cappelen, and David Plunkett 1 OUP CORRECTED PROOF – FINAL, 17/12/2019, SPi 3 Great Clarendon Street, Oxford, OX2 6DP, United Kingdom Oxford University Press is a department of the University of Oxford. It furthers the University’s objective of excellence in research, scholarship, and education by publishing worldwide. Oxford is a registered trade mark of Oxford University Press in the UK and in certain other countries © the several contributors 2020 The moral rights of the authors have been asserted First Edition published in 2020 Impression: 1 Some rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, for commercial purposes, without the prior permission in writing of Oxford University Press, or as expressly permitted by law, by licence or under terms agreed with the appropriate reprographics rights organization. This is an open access publication, available online and distributed under the terms of a Creative Commons Attribution – Non Commercial – No Derivatives 4.0 International licence (CC BY-NC-ND 4.0), a copy of which is available at http://creativecommons.org/licenses/by-nc-nd/4.0/. Enquiries concerning reproduction outside the scope of this licence should be sent to the Rights Department, Oxford University Press, at the address above Published in the United States of America by Oxford University Press 198 Madison Avenue, New York, NY 10016, United States of America British Library Cataloguing in Publication Data Data available Library of Congress Control Number: 2019946746 ISBN 978–0–19–880185–6 DOI: 10.1093/oso/9780198801856.003.0001 Printed and bound in Great Britain by Clays Ltd, Elcograf S.p.A. -
Reductionism in Biology
pdf version of the entry Reductionism in Biology http://plato.stanford.edu/archives/sum2012/entries/reduction-biology/ Reductionism in Biology from the Summer 2012 Edition of the First published Tue May 27, 2008; substantive revision Mon Apr 30, 2012 Stanford Encyclopedia Reductionism encompasses a set of ontological, epistemological, and methodological claims about the relations between different scientific of Philosophy domains. The basic question of reduction is whether the properties, concepts, explanations, or methods from one scientific domain (typically at higher levels of organization) can be deduced from or explained by the properties, concepts, explanations, or methods from another domain of science (typically one about lower levels of organization). Reduction is Edward N. Zalta Uri Nodelman Colin Allen John Perry germane to a variety of issues in philosophy of science, including the Principal Editor Senior Editor Associate Editor Faculty Sponsor structure of scientific theories, the relations between different scientific Editorial Board disciplines, the nature of explanation, the diversity of methodology, and http://plato.stanford.edu/board.html the very idea of theoretical progress, as well as to numerous topics in Library of Congress Catalog Data metaphysics and philosophy of mind, such as emergence, mereology, and ISSN: 1095-5054 supervenience. Notice: This PDF version was distributed by request to mem- In recent philosophy of biology (1970s to the 1990s), the primary debate bers of the Friends of the SEP Society and by courtesy to SEP content contributors. It is solely for their fair use. Unauthorized about reduction has focused on the question of whether and in what sense distribution is prohibited. To learn how to join the Friends of the classical genetics can be reduced to molecular biology. -
Activities of The
activities of the Inhalt Contents Seite Page 2 1 Jahresrückblick und Struktur des KLI Review 2010 and Structure of the KLI 6 2 Projekte Projects 2.1 Bewerbungen / Applications 2.2 Junior Gastwissenschaftler / Junior Visiting Fellows 2.3 Postdoktoranden-Stipendien / Postdoctoral Fellowships 2.4 Senior Stipendiaten / Senior Fellows 2.5 Austausch-Stipendium / Exchange Felllowship 2.6 Gastwissenschaftler / Visiting Scientists 32 3 Wissenschaftliche Veranstaltungen Meetings and Lectures 3.1 Altenberg Workshops 3.2 Symposia 3.3 Rupert Riedl Lecture 3.4 Mittagsdiskussionen / Brown Bag Discussions 50 4 Publikationen Publications 4.1 Vienna Series in Theoretical Biology 4.2 Sammelbände und Bücher / Edited Volumes and Books 4.3 Fachartikel / Professional Papers 4.4 Artikel im Druck / Papers in Press 4.5 Zeitschrift Biological Theory / Journal 4.6 Vorträge und Kongressbeiträge / Scientific Presentations 70 5 Weitere Aktivitäten Further Activities 5.1 EASPLS Graduate Meeting 5.2 Zusätzliche Förderungen Jahresrückblick und Struktur des KLI Review 2010 and Structure of the KLI 61 Through its in-house activities and freshly conceived workshops and seminar series the KLI has uniquely provided a context for rethinking major questions in developmental, cognitive, and evolutionary biology. Stuart Newman, New York Medical College Jahresrückblick und Struktur des KLI Review 2010 and Structure of the KLI 1.1 Jahresrückblick 2010 The Year in Review Der weltweit zu beobachtende Wandel der akademischen Institutionen hat in 3 den letzten Jahren auch Österreich voll erfasst. Das Gespenst der „Nützlichkeit“ geht um. Teils erzwungen, teils in vorauseilendem bürokratischen Eifer bemessen die Universitäten ihre eigenen Leistungen immer mehr nach ökonomistischen Managementkriterien. Die eigentlichen Aufgaben der akademischen Einrichtun- gen – Erkennen, Verstehen, Analyse, Wissen, Kritik, Diskurs, Bildung – die funda- mental auf intellektueller Unabhängigkeit beruhen, werden unter dem Gewicht sogenannter Effizienzkriterien zunehmend zurückgedrängt. -
The Philosophy of Biology Edited by David L
Cambridge University Press 978-0-521-85128-2 - The Cambridge Companion to the Philosophy of Biology Edited by David L. Hull and Michael Ruse Frontmatter More information the cambridge companion to THE PHILOSOPHY OF BIOLOGY The philosophy of biology is one of the most exciting new areas in the field of philosophy and one that is attracting much attention from working scientists. This Companion, edited by two of the founders of the field, includes newly commissioned essays by senior scholars and by up-and- coming younger scholars who collectively examine the main areas of the subject – the nature of evolutionary theory, classification, teleology and function, ecology, and the prob- lematic relationship between biology and religion, among other topics. Up-to-date and comprehensive in its coverage, this unique volume will be of interest not only to professional philosophers but also to students in the humanities and researchers in the life sciences and related areas of inquiry. David L. Hull is an emeritus professor of philosophy at Northwestern University. The author of numerous books and articles on topics in systematics, evolutionary theory, philosophy of biology, and naturalized epistemology, he is a recipient of a Guggenheim Foundation fellowship and is a Fellow of the American Academy of Arts and Sciences. Michael Ruse is professor of philosophy at Florida State University. He is the author of many books on evolutionary biology, including Can a Darwinian Be a Christian? and Darwinism and Its Discontents, both published by Cam- bridge University Press. A Fellow of the Royal Society of Canada and the American Association for the Advancement of Science, he has appeared on television and radio, and he contributes regularly to popular media such as the New York Times, the Washington Post, and Playboy magazine. -
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Philosophy of Chemistry by Eric Scerri Of course, the field of compu- hen I push my hand down onto my desk it tational quantum chemistry, does not generally pass through the which Dirac and other pioneers Wwooden surface. Why not? From the per- of quantum mechanics inadver- spective of physics perhaps it ought to, since we are tently started, has been increas- told that the atoms that make up all materials consist ingly fruitful in modern mostly of empty space. Here is a similar question that chemistry. But this activity has is put in a more sophisticated fashion. In modern certainly not replaced the kind of physics any body is described as a superposition of chemistry in which most practitioners are engaged. many wavefunctions, all of which stretch out to infin- Indeed, chemists far outnumber scientists in all other ity in principle. How is it then that the person I am fields of science. According to some indicators, such as talking to across my desk appears to be located in one the numbers of articles published per year, chemistry particular place? may even outnumber all the other fields of science put together. If there is any sense in which chemistry can The general answer to both such questions is that be said to have been reduced then it can equally be although the physics of microscopic objects essen- said to be in a high state of "oxidation" regarding cur- tially governs all of matter, one must also appeal to rent academic and industrial productivity. the laws of chemistry, material science, biology, and Starting in the early 1990s a group of philosophers other sciences. -
Bridging the Philosophies of Biology and Chemistry
CALL FOR PAPERS First International Conference on Bridging the Philosophies of Biology and Chemistry 25-27 June 2019 University of Paris Diderot, France Extended Deadline for Abstract Submission: 28 February 2019 The aim of this conference is to bring philosophers of biology and philosophers of chemistry together and to explore common grounds and topics of interest. We particularly welcome papers on (1) the philosophy of interdisciplinary fields between biology and chemistry; (2) historical case studies on the disciplinary divergence and convergence of biology and chemistry; and (3) the similarities and differences between philosophical approaches to biology and chemistry. Philosophy is broadly construed and includes epistemological, methodological, ontological, metaphysical, ethical, political, and legal issues of science. For a detailed description of possible topics, please see below and visit the conference website http://www.sphere.univ-paris-diderot.fr/spip.php?article2228&lang=en Instructions for Abstract Submission Submit a Word file including author name(s), affiliation, paper title, and an abstract of maximum 500 words by 28 February 2019 to Jean-Pierre Llored ([email protected]) . Registration If you are interested in participating, please register by sending an e-mail to Jean-Pierre Llored ([email protected]) before 30 April 2019. Venue Room 454A, Building Condorcet, University Paris Diderot, 4, rue Elsa Morante, 75013 Paris, France Sponsors CNRS; Laboratory SPHERE, Laboratory LIED, and Department of History and Philosophy of Science, University of Paris Diderot; Fondation de la Maison de la Chimie; Free University of Brussels; University of Lille Organizers Cécilia Bognon, Quentin Hiernaux, Jean-Pierre Llored, Joachim Schummer First international Conference on Bridging the Philosophies of Biology and Chemistry 25-27 June 2019, University of Paris Diderot, France Description Background For much of the twentieth century, philosophy of science had almost exclusively been focused on physics and mathematics. -
Evolution & Development
DOI: 10.1111/ede.12315 RESEARCH Developmental structuring of phenotypic variation: A case study with a cellular automata model of ontogeny Wim Hordijk1 | Lee Altenberg2 1Konrad Lorenz Institute for Evolution and Cognition Research, Klosterneuburg, Abstract Austria Developmental mechanisms not only produce an organismal phenotype, but 2University of Hawai‘iatMānoa, they also structure the way genetic variation maps to phenotypic variation. ‘ Honolulu, Hawai i Here, we revisit a computational model for the evolution of ontogeny based on Correspondence cellular automata, in which evolution regularly discovered two alternative Wim Hordijk, Konrad Lorenz Institute for mechanisms for achieving a selected phenotype, one showing high modularity, Evolution and Cognition Research, the other showing morphological integration. We measure a primary variational Martinstrasse 12, 3400 Klosterneuburg, Austria. property of the systems, their distribution of fitness effects of mutation. We find Email: [email protected] that the modular ontogeny shows the evolution of mutational robustness and ontogenic simplification, while the integrated ontogeny does not. We discuss the wider use of this methodology on other computational models of development as well as real organisms. 1 | INTRODUCTION summarize, “almost anything can be changed if it shows phenotypic variation” and “combinations of traits, even The idea that phenotypic variation could ever be those unfavorably correlated, can be changed”). Once the “unbiased” is a historical artifact coming from two main premises of this “pan‐variationism” are accepted, pans- sources: First were the early characterizations of quanti- electionism is the natural conclusion—in other words, if tative genetic variation for single traits or small numbers variation is diffusing in every phenotypic direction, the of traits. -
Rethinking the Pragmatic Systems Biology and Systems-Theoretical Biology Divide: Toward a Complexity-Inspired Epistemology of Systems Biomedicine T
Medical Hypotheses 131 (2019) 109316 Contents lists available at ScienceDirect Medical Hypotheses journal homepage: www.elsevier.com/locate/mehy Rethinking the pragmatic systems biology and systems-theoretical biology divide: Toward a complexity-inspired epistemology of systems biomedicine T Srdjan Kesić Department of Neurophysiology, Institute for Biological Research “Siniša Stanković”, University of Belgrade, Despot Stefan Blvd. 142, 11060 Belgrade, Serbia ARTICLE INFO ABSTRACT Keywords: This paper examines some methodological and epistemological issues underlying the ongoing “artificial” divide Systems biology between pragmatic-systems biology and systems-theoretical biology. The pragmatic systems view of biology has Cybernetics encountered problems and constraints on its explanatory power because pragmatic systems biologists still tend Second-order cybernetics to view systems as mere collections of parts, not as “emergent realities” produced by adaptive interactions Complexity between the constituting components. As such, they are incapable of characterizing the higher-level biological Complex biological systems phenomena adequately. The attempts of systems-theoretical biologists to explain these “emergent realities” Epistemology of complexity using mathematics also fail to produce satisfactory results. Given the increasing strategic importance of systems biology, both from theoretical and research perspectives, we suggest that additional epistemological and methodological insights into the possibility of further integration between