Therapy of Non-Dermatophytic Mycoses in Animals
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Systemic Antifungal Drug Use in Belgium—
Received: 7 October 2018 | Revised: 28 March 2019 | Accepted: 14 March 2019 DOI: 10.1111/myc.12912 ORIGINAL ARTICLE Systemic antifungal drug use in Belgium—One of the biggest antifungal consumers in Europe Berdieke Goemaere1 | Katrien Lagrou2,3* | Isabel Spriet4,5 | Marijke Hendrickx1 | Eline Vandael6 | Pierre Becker1 | Boudewijn Catry6,7 1BCCM/IHEM Fungal Collection, Service of Mycology and Aerobiology, Sciensano, Summary Brussels, Belgium Background: Reports on the consumption of systemic antifungal drugs on a national 2 Department of Microbiology and level are scarce although of high interest to compare trends and the associated epi- Immunology, KU Leuven, Leuven, Belgium 3Clinical Department of Laboratory demiology in other countries and to assess the need for antifungal stewardship Medicine, National Reference Centre for programmes. Mycosis, University Hospitals Leuven, Leuven, Belgium Objectives: To estimate patterns of Belgian inpatient and outpatient antifungal use 4Department of Pharmaceutical and and provide reference data for other countries. Pharmacological Sciences, KU Leuven, Methods: Consumption records of antifungals were collected in Belgian hospitals Leuven, Belgium between 2003 and 2016. Primary healthcare data were available for the azoles for 5Pharmacy Department, University Hospitals Leuven, Leuven, Belgium the period 2010-2016. 6 Healthcare‐Associated Infections and Results: The majority of the antifungal consumption resulted from prescriptions of Antimicrobial Resistance, Sciensano, Brussels, Belgium fluconazole and itraconazole in the ambulatory care while hospitals were responsible 7Faculty of Medicine, Université Libre de for only 6.4% of the total national consumption and echinocandin use was limited. Bruxelles (ULB), Brussels, Belgium The annual average antifungal consumption in hospitals decreased significantly by Correspondence nearly 25% between 2003 and 2016, due to a decrease solely in non-university hos- Berdieke Goemaere, Sciensano, Mycology pitals. -
108 Acremonium-Подобные Грибы
Acremonium-подобные грибы: разнообразие таксонов Е.Ю. Благовещенская, Н.И.Блум Московский Государственный университет имени М.В. Ломоносова [email protected] Acremonium Link — это анаморфный род порядка Hypocreales, широко представленный в природе и имеющий очень большое практическое значение, особенно для медицинской микологии. Бедность морфологии неоднократно приводила (и приводит) к существенным проблемам при идентификации изолятов и различным таксономическим конфузам. Наиболее знаменитым из них, конечно же, является само существование этого рода, так как многие виды акремониев и по сегодняшний день фигурируют в работах как виды другого рода — рода Cephalosporium Corda — который еще полвека назад был признан nomen confusum (Gams, 1968). Основная часть видов этого рода перешла в род Acremonium, а затем и в другие таксоны сумчатых грибов. Тем не менее, в настоящий момент времени в базах Index Fungorum и MycoBank около двадцати видов рода Cephalosporium снова имеют статус леги-тимных, причем некоторый абсурд ситуации добавляет то, что род Cephalosporium в базе Index Fungorum по-прежнему указан как синонимичный роду Acremonium. Таким образом, ситуация остается весьма запутанной. В русскоязычной литературе проблемное положение акремониеподобных грибов вообще практически не освещалось за небольшим исключением (Тарасов, 1976; Налепина и Тарасов, 1987). В нашей работе мы постараемся восполнить этот пробел и привести обзор современного положения Acremonium spp. и схожих видов. Для облегчения восприятия мы приводим в алфавитном порядке список наиболее важных терминов, используемых в ли-тературе при описании таксонов с пояснениями и схематическими иллюстрациями (рис. 1). Термины, используемые при описании таксонов Аделофиалида — редуцированная фиалида в виде слабо дифференцированного ответ-вления от основной клетки (рис. 1, d); септы, отделяющей аделофиалиду от подлежащей гифы, не формируется. Характерная особенность — хорошо выраженный воротничок. -
Monograph on Dematiaceous Fungi
Monograph On Dematiaceous fungi A guide for description of dematiaceous fungi fungi of medical importance, diseases caused by them, diagnosis and treatment By Mohamed Refai and Heidy Abo El-Yazid Department of Microbiology, Faculty of Veterinary Medicine, Cairo University 2014 1 Preface The first time I saw cultures of dematiaceous fungi was in the laboratory of Prof. Seeliger in Bonn, 1962, when I attended a practical course on moulds for one week. Then I handled myself several cultures of black fungi, as contaminants in Mycology Laboratory of Prof. Rieth, 1963-1964, in Hamburg. When I visited Prof. DE Varies in Baarn, 1963. I was fascinated by the tremendous number of moulds in the Centraalbureau voor Schimmelcultures, Baarn, Netherlands. On the other hand, I was proud, that El-Sheikh Mahgoub, a Colleague from Sundan, wrote an internationally well-known book on mycetoma. I have never seen cases of dematiaceous fungal infections in Egypt, therefore, I was very happy, when I saw the collection of mycetoma cases reported in Egypt by the eminent Egyptian Mycologist, Prof. Dr Mohamed Taha, Zagazig University. To all these prominent mycologists I dedicate this monograph. Prof. Dr. Mohamed Refai, 1.5.2014 Heinz Seeliger Heinz Rieth Gerard de Vries, El-Sheikh Mahgoub Mohamed Taha 2 Contents 1. Introduction 4 2. 30. The genus Rhinocladiella 83 2. Description of dematiaceous 6 2. 31. The genus Scedosporium 86 fungi 2. 1. The genus Alternaria 6 2. 32. The genus Scytalidium 89 2.2. The genus Aurobasidium 11 2.33. The genus Stachybotrys 91 2.3. The genus Bipolaris 16 2. -
IJP: Drugs and Drug Resistance 8 (2018) 246–264
IJP: Drugs and Drug Resistance 8 (2018) 246–264 Contents lists available at ScienceDirect IJP: Drugs and Drug Resistance journal homepage: www.elsevier.com/locate/ijpddr Genomic and transcriptomic alterations in Leishmania donovani lines T experimentally resistant to antileishmanial drugs Alberto Rastrojoa,1, Raquel García-Hernándezb,1, Paola Vargasb, Esther Camachoa, Laura Corvoa, Hideo Imamurac, Jean-Claude Dujardinc, Santiago Castanysb, Begoña Aguadoa, ∗∗ ∗ Francisco Gamarrob, , Jose M. Requenaa, a Centro de Biología Molecular “Severo Ochoa” (CSIC-UAM), Universidad Autónoma de Madrid, Madrid, Spain b Instituto de Parasitología y Biomedicina ‘‘López-Neyra’’ (IPBLN-CSIC), Granada, Spain c Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium ARTICLE INFO ABSTRACT Keywords: Leishmaniasis is a serious medical issue in many countries around the World, but it remains largely neglected in Leishmania donovani terms of research investment for developing new control and treatment measures. No vaccines exist for human Genome use, and the chemotherapeutic agents currently used are scanty. Furthermore, for some drugs, resistance and Transcriptome treatment failure are increasing to alarming levels. The aim of this work was to identify genomic and tran- Trivalent antimony criptomic alterations associated with experimental resistance against the common drugs used against VL: tri- Amphotericin B valent antimony (SbIII, S line), amphotericin B (AmB, A line), miltefosine (MIL, M line) and paromomycin (PMM, Miltefosine ff fi Paromomycin P line). A total of 1006 di erentially expressed transcripts were identi ed in the S line, 379 in the A line, 146 in 24-Sterol methyltransferase the M line, and 129 in the P line. Also, changes in ploidy of chromosomes and amplification/deletion of par- D-lactate dehydrogenase ticular regions were observed in the resistant lines regarding the parental one. -
Aspergillus Subgenus Polypaecilum from the Built Environment
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 88: 237–267 (2017). Aspergillus subgenus Polypaecilum from the built environment J.B. Tanney1,2*,5, C.M. Visagie1,3,4*,5, N. Yilmaz1,3, and K.A. Seifert1,3 1Ottawa Research and Development Centre, Biodiversity (Mycology and Microbiology), Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario K1A 0C6, Canada; 2Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval, Quebec G1V 0A6, Canada; 3Department of Biology, University of Ottawa, 30 Marie Curie, Ottawa, Ontario, K1N 6N5, Canada; 4Biosystematics Division, ARC-Plant Health and Protection, P/BagX134, Queenswood, 0121 Pretoria, South Africa *Correspondence: J.B. Tanney, [email protected]; C.M. Visagie, [email protected] 5The first two authors contributed equally to this work and share the first authorship Abstract: Xerophilic fungi, especially Aspergillus species, are prevalent in the built environment. In this study, we employed a combined culture-independent (454- pyrosequencing) and culture-dependent (dilution-to-extinction) approach to investigate the mycobiota of indoor dust collected from 93 buildings in 12 countries worldwide. High and low water activity (aw) media were used to capture mesophile and xerophile biodiversity, resulting in the isolation of approximately 9 000 strains. Among these, 340 strains representing seven putative species in Aspergillus subgenus Polypaecilum were isolated, mostly from lowered aw media, and tentatively identified based on colony morphology and internal transcribed spacer rDNA region (ITS) barcodes. Further morphological study and phylogenetic analyses using sequences of ITS, β-tubulin (BenA), calmodulin (CaM), RNA polymerase II second largest subunit (RPB2), DNA topoisomerase 1 (TOP1), and a pre-mRNA processing protein homolog (TSR1) confirmed the isolation of seven species of subgenus Polypaecilum, including five novel species: A. -
Taxonomy and Evolution of Aspergillus, Penicillium and Talaromyces in the Omics Era – Past, Present and Future
Computational and Structural Biotechnology Journal 16 (2018) 197–210 Contents lists available at ScienceDirect journal homepage: www.elsevier.com/locate/csbj Taxonomy and evolution of Aspergillus, Penicillium and Talaromyces in the omics era – Past, present and future Chi-Ching Tsang a, James Y.M. Tang a, Susanna K.P. Lau a,b,c,d,e,⁎, Patrick C.Y. Woo a,b,c,d,e,⁎ a Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong b Research Centre of Infection and Immunology, The University of Hong Kong, Hong Kong c State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong d Carol Yu Centre for Infection, The University of Hong Kong, Hong Kong e Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, The University of Hong Kong, Hong Kong article info abstract Article history: Aspergillus, Penicillium and Talaromyces are diverse, phenotypically polythetic genera encompassing species im- Received 25 October 2017 portant to the environment, economy, biotechnology and medicine, causing significant social impacts. Taxo- Received in revised form 12 March 2018 nomic studies on these fungi are essential since they could provide invaluable information on their Accepted 23 May 2018 evolutionary relationships and define criteria for species recognition. With the advancement of various biological, Available online 31 May 2018 biochemical and computational technologies, different approaches have been adopted for the taxonomy of Asper- gillus, Penicillium and Talaromyces; for example, from traditional morphotyping, phenotyping to chemotyping Keywords: Aspergillus (e.g. lipotyping, proteotypingand metabolotyping) and then mitogenotyping and/or phylotyping. Since different Penicillium taxonomic approaches focus on different sets of characters of the organisms, various classification and identifica- Talaromyces tion schemes would result. -
Nystatin and Triamcinolone Acetonide Cream, USP Nystatin And
FRONT BACK Nystatin and Triamcinolone Acetonide Cream, USP PK-1111-3 corticosteroids. 45 Children may absorb proportionally larger amounts of topical corticosteroids and thus be more susceptible to Nystatin and Triamcinolone Acetonide Ointment, USP systemic toxicity (see PRECAUTIONS, Pediatric Use). Rx only If irritation or hypersensitivity develops with the combination nystatin and triamcinolone acetonide, treatment should be discontinued and appropriate therapy instituted. FOR EXTERNAL USE ONLY. NOT FOR OPHTHALMIC USE Information for the Patient: Patients using this medication should receive the following information and DESCRIPTION: Nystatin and Triamcinolone Acetonide Cream and Ointment for dermatologic use contain the instructions: antifungal agent nystatin and the synthetic corticosteroid triamcinolone acetonide. 1. This medication is to be used as directed by the physician. It is for external use only. Avoid contact with the eyes. Nystatin is a polyene antimycotic obtained from Streptomyces noursei. It is a yellow to light tan powder with a 2. Patients should be advised not to use this medication for any disorder other than for which it was prescribed. cereallike odor, very slightly soluble in water, and slightly to sparingly soluble in alcohol. Structural formula: 3. The treated skin area should not be bandaged or otherwise covered or wrapped as to be occluded (see CH3 DOSAGE AND ADMINISTRATION). O H CH3 4. Patients should report any signs of local adverse reactions. O H HO OH H2N 5. When using this medication in the inguinal area, patients should be advised to apply the cream or ointment OH OH sparingly and to wear loose fitting clothing. CH3 H H H3C 6. Parents of pediatric patients should be advised not to use tight-fitting diapers or plastic pants on a child being OH O COOH treated in the diaper area, as these garments may constitute occlusive dressings. -
Rare Fungal Infection Linked to a Case of Juvenile Arthritis
Open Access Case Report DOI: 10.7759/cureus.3229 Rare Fungal Infection Linked to a Case of Juvenile Arthritis Karin Ried 1 , Peter Fakler 1 1. NIIM Research, National Institute of Integrative Medicine, Melbourne, AUS Corresponding author: Karin Ried, [email protected] Abstract Juvenile arthritis with unknown disease etiology is also known as juvenile idiopathic arthritis. Symptoms include joint pain, swelling, and stiffness, and standard treatment involves immunosuppressant medication. Here we present a case of juvenile idiopathic arthritis with severe malnutrition and worsening of symptoms, which restrained a nine-year-old girl to a wheelchair with minimal movement capacity and low energy during standard immunosuppressant therapies over the course of three years. Our innovative Pathogen Blood Test combining cytology-based microscopy and genetic analysis using a pan-fungal primer assay and sequencing identified a systemic fungal infection with Sagenomella species, closely related to Aspergillus, and a soil-dwelling highly pathogenic fungus, which had previously been linked to a fatal veterinary case of arthritis and malnutrition. Our test results encouraged a radical change of the patient’s treatment plan, including cessation of the regular immunosuppressants, including steroids, over six months. The patient made a progressive recovery, including complete reversion of the previously swollen and painful joints, development of a good appetite, and return to liveliness. Within the year of change from immunosuppressants to immune-supportive integrative nutritional therapies, including regular intravenous vitamin C, and oral vitamin D, as well as gentle aqua- and physiotherapy, the patient started to gain weight including muscle mass and regained strength and movement in the hands, arms, and legs. -
WO 2017/009265 Al 19 January 2017 (19.01.2017) P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2017/009265 Al 19 January 2017 (19.01.2017) P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every A01N 31/06 (2006.01) A01N 37/04 (2006.01) kind of national protection available): AE, AG, AL, AM, A0 37/00 (2006.01) A01P 1/00 (2006.01) AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, A0 37/02 (2006.01) BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (21) International Application Number: HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, PCT/EP2016/066368 KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, (22) International Filing Date: MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, 8 July 2016 (08.07.2016) PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, (25) Filing Language: English TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. (26) Publication Language: English (84) Designated States (unless otherwise indicated, for every (30) Priority Data: kind of regional protection available): ARIPO (BW, GH, 15 12 135.3 10 July 2015 (10.07.2015) GB GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, (71) Applicant: IPABC LTD [GB/GB]; The Die-Pat Centre, TJ, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, Broad March, Broad March, Daventry, Northamptonshire DK, EE, ES, FI, FR, GB, GR, HR, HU, IE, IS, IT, LT, LU, NN1 1 4HE (GB). -
Identification of Culture-Negative Fungi in Blood and Respiratory Samples
IDENTIFICATION OF CULTURE-NEGATIVE FUNGI IN BLOOD AND RESPIRATORY SAMPLES Farida P. Sidiq A Dissertation Submitted to the Graduate College of Bowling Green State University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY May 2014 Committee: Scott O. Rogers, Advisor W. Robert Midden Graduate Faculty Representative George Bullerjahn Raymond Larsen Vipaporn Phuntumart © 2014 Farida P. Sidiq All Rights Reserved iii ABSTRACT Scott O. Rogers, Advisor Fungi were identified as early as the 1800’s as potential human pathogens, and have since been shown as being capable of causing disease in both immunocompetent and immunocompromised people. Clinical diagnosis of fungal infections has largely relied upon traditional microbiological culture techniques and examination of positive cultures and histopathological specimens utilizing microscopy. The first has been shown to be highly insensitive and prone to result in frequent false negatives. This is complicated by atypical phenotypes and organisms that are morphologically indistinguishable in tissues. Delays in diagnosis of fungal infections and inaccurate identification of infectious organisms contribute to increased morbidity and mortality in immunocompromised patients who exhibit increased vulnerability to opportunistic infection by normally nonpathogenic fungi. In this study we have retrospectively examined one-hundred culture negative whole blood samples and one-hundred culture negative respiratory samples obtained from the clinical microbiology lab at the University of Michigan Hospital in Ann Arbor, MI. Samples were obtained from randomized, heterogeneous patient populations collected between 2005 and 2006. Specimens were tested utilizing cetyltrimethylammonium bromide (CTAB) DNA extraction and polymerase chain reaction amplification of internal transcribed spacer (ITS) regions of ribosomal DNA utilizing panfungal ITS primers. -
University of Alberta Microfungus Collection and Herbarium (Uamh)
UNIVERSITY OF ALBERTA MICROFUNGUS COLLECTION AND HERBARIUM (UAMH) A Unit of the Devonian Botanic Garden, Faculty of Agriculture, Life and Environmental Sciences Telephone 780‐987‐4811; Fax 780‐987‐4141; e‐mail: [email protected] http://www.uamh.devonian.ualberta.ca SUMMARY OF ACTIVITIES FOR 2011 Supporting fungal research for over 50 years Staff, Volunteers Professor Emeritus (Curator) ‐ L. Sigler Devonian Botanic Garden/UAMH, Fac. Agriculture, Life & Environmental Sciences Medical Microbiology & Immunology, Fac. of Medicine Adj. Prof. Biol. Sci. Consultant in Mycology, PLNA/UAH Microbiology & Public Health Assistant Curator (.5 FTE Non‐academic, .5 FTE trust, NSERC) – C. Gibas Technicians (trust): ‐ A. Anderson; V. Jajczay (casual) Volunteer‐ M. Packer Affiliates R. Currah, Professor Emeritus, Biological Sciences, Faculty of Science M. Berbee, Professor, University of British Columbia, Vancouver G. Hausner, Assistant Professor, University of Manitoba, Winnipeg Cultures Received, Distributed and Accessioned Cultures received for identification, deposit or in exchange (Table 1) ....................................... 233 Cultures distributed on request or in exchange (Table 2)............................................................ 262 Culture Collection and Herbarium Accessions Accessions processed to Dec 31. .................................................................................................. 284 Total accessions....................................................................................................................... -
Amphotericin B Amphocil
Public Assessment Report for paediatric studies submitted in accordance with Article 45 of Regulation (EC) No1901/2006, as amended Amphotericin B Amphocil Abelcet DE/W/009/pdWS/001 Rapporteur: Germany Finalisation procedure (day 120): 24.11.2017 Amphotericin B DE/W/009/pdWS/001 Seite 1 TABLE OF CONTENTS I. Executive Summary ....................................................................................................... 4 II. RecommendatioN .......................................................................................................... 4 III. INTRODUCTION ............................................................................................................. 6 IV. SCIENTIFIC DISCUSSION .............................................................................................. 7 IV.1 Information on the pharmaceutical formulation used in the clinical studies .............. 7 IV.2 Non-clinical aspects ................................................................................................................... 9 IV.3 Clinical aspects .......................................................................................................................... 10 V. MEMBER STATES Overall Conclusion AND RECOMMENDATION ........................... 31 VI. List of Medicinal products and marketing authorisation holders involved ............. 33 Amphotericin B DE/W/009/pdWS/001 Page 2/33 ADMINISTRATIVE INFORMATION Invented name of the medicinal See section VI product(s): INN (or common name) of the active Amphotericin B substance(s):