Species-Specific Variations in the Metabolomic Profiles of Acropora
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Hermatypic Coral Fauna of Subtropical Southeast Africa: a Checklist!
Pacific Science (1996), vol. 50, no. 4: 404-414 © 1996 by University of Hawai'i Press. All rights reserved Hermatypic Coral Fauna of Subtropical Southeast Africa: A Checklist! 2 BERNHARD RrnGL ABSTRACT: The South African hermatypic coral fauna consists of 96 species in 42 scleractinian genera, one stoloniferous octocoral genus (Tubipora), and one hermatypic hydrocoral genus (Millepora). There are more species in southern Mozambique, with 151 species in 49 scleractinian genera, one stolo niferous octocoral (Tubipora musica L.), and one hydrocoral (Millepora exaesa [Forskal)). The eastern African coral faunas of Somalia, Kenya, Tanzania, Mozambique, and South Africa are compared and Southeast Africa dis tinguished as a biogeographic subregion, with six endemic species. Patterns of attenuation and species composition are described and compared with those on the eastern boundaries of the Indo-Pacific in the Pacific Ocean. KNOWLEDGE OF CORAL BIODIVERSITY in the Mason 1990) or taxonomically inaccurate Indo-Pacific has increased greatly during (Boshoff 1981) lists of the corals of the high the past decade (Sheppard 1987, Rosen 1988, latitude reefs of Southeast Africa. Sheppard and Sheppard 1991 , Wallace and In this paper, a checklist ofthe hermatypic Pandolfi 1991, 1993, Veron 1993), but gaps coral fauna of subtropical Southeast Africa, in the record remain. In particular, tropical which includes the southernmost corals of and subtropical subsaharan Africa, with a Maputaland and northern Natal Province, is rich and diverse coral fauna (Hamilton and evaluated and compared with a checklist of Brakel 1984, Sheppard 1987, Lemmens 1993, the coral faunas of southern Mozambique Carbone et al. 1994) is inadequately docu (Boshoff 1981). -
Reef Environments Shape Microbial Partners in a Highly Connected Coral Population
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.27.357095; this version posted October 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Reef environments shape microbial partners in a highly connected coral population 2 Kriefall NG1, Kanke MR2, Aglyamova GV3, Davies SW1 3 4 1Biology Department, Boston University, Boston, MA, USA 5 2Department of Biomedical Sciences, College of Veterinary Medicine, Cornell University, 6 Ithaca, NY, USA 7 3Department of Integrative Biology, the University of Texas at Austin, Austin, TX, USA 8 9 KEYWORDS 10 Holobiont, reef zones, Acropora hyacinthus, Symbiodiniaceae, bacteria, French Polynesia 11 12 ABSTRACT 13 Corals from more thermally variable environments often fare better under thermal stress 14 compared to those from less thermally variable environments, an important finding given that 15 ocean warming threatens corals worldwide. Evidence is mounting that thermal tolerance can be 16 attributed to the coral itself, as well as microbial communities present within the holobiont (coral 17 host and its associated microorganisms). However, few studies have characterized how thermally 18 variable environments structure multiple holobiont members in situ. Here, using 2b-RAD 19 sequencing of the coral and metabarcoding of algal (ITS2) and bacterial (16S) communities, we 20 show evidence that reef zones (locales differing in proximity to shore, physical characteristics, 21 and environmental variability) structure algal and bacterial communities at different scales 22 within a highly connected coral population (Acropora hyacinthus) in French Polynesia. -
Marine Biodiversity in India
MARINEMARINE BIODIVERSITYBIODIVERSITY ININ INDIAINDIA MARINE BIODIVERSITY IN INDIA Venkataraman K, Raghunathan C, Raghuraman R, Sreeraj CR Zoological Survey of India CITATION Venkataraman K, Raghunathan C, Raghuraman R, Sreeraj CR; 2012. Marine Biodiversity : 1-164 (Published by the Director, Zool. Surv. India, Kolkata) Published : May, 2012 ISBN 978-81-8171-307-0 © Govt. of India, 2012 Printing of Publication Supported by NBA Published at the Publication Division by the Director, Zoological Survey of India, M-Block, New Alipore, Kolkata-700 053 Printed at Calcutta Repro Graphics, Kolkata-700 006. ht³[eg siJ rJrJ";t Œtr"fUhK NATIONAL BIODIVERSITY AUTHORITY Cth;Govt. ofmhfUth India ztp. ctÖtf]UíK rvmwvtxe yÆgG Dr. Balakrishna Pisupati Chairman FOREWORD The marine ecosystem is home to the richest and most diverse faunal and floral communities. India has a coastline of 8,118 km, with an exclusive economic zone (EEZ) of 2.02 million sq km and a continental shelf area of 468,000 sq km, spread across 10 coastal States and seven Union Territories, including the islands of Andaman and Nicobar and Lakshadweep. Indian coastal waters are extremely diverse attributing to the geomorphologic and climatic variations along the coast. The coastal and marine habitat includes near shore, gulf waters, creeks, tidal flats, mud flats, coastal dunes, mangroves, marshes, wetlands, seaweed and seagrass beds, deltaic plains, estuaries, lagoons and coral reefs. There are four major coral reef areas in India-along the coasts of the Andaman and Nicobar group of islands, the Lakshadweep group of islands, the Gulf of Mannar and the Gulf of Kachchh . The Andaman and Nicobar group is the richest in terms of diversity. -
TUVALU MARINE LIFE PROJECT Phase 1: Literature Review
TUVALU MARINE LIFE PROJECT Phase 1: Literature review Project funded by: Tuvalu Marine Biodiversity – Literature Review Table of content TABLE OF CONTENT 1. CONTEXT AND OBJECTIVES 4 1.1. Context of the survey 4 1.1.1. Introduction 4 1.1.2. Tuvalu’s national adaptation programme of action (NAPA) 4 1.1.3. Tuvalu national biodiversity strategies and action plan (NBSAP) 5 1.2. Objectives 6 1.2.1. General objectives 6 1.2.2. Specific objectives 7 2. METHODOLOGY 8 2.1. Gathering of existing data 8 2.1.1. Contacts 8 2.1.2. Data gathering 8 2.1.3. Documents referencing 16 2.2. Data analysis 16 2.2.1. Data verification and classification 16 2.2.2. Identification of gaps 17 2.3. Planning for Phase 2 18 2.3.1. Decision on which survey to conduct to fill gaps in the knowledge 18 2.3.2. Work plan on methodologies for the collection of missing data and associated costs 18 3. RESULTS 20 3.1. Existing information on Tuvalu marine biodiversity 20 3.1.1. Reports and documents 20 3.1.2. Data on marine species 24 3.2. Knowledge gaps 41 4. WORK PLAN FOR THE COLLECTION OF FIELD DATA 44 4.1. Meetings in Tuvalu 44 4.2. Recommendations on field surveys to be conducted 46 4.3. Proposed methodologies 48 4.3.1. Option 1: fish species richness assessment 48 4.3.2. Option 2: valuable fish stock assessment 49 4.3.3. Option 3: fish species richness and valuable fish stock assessment 52 4.3.4. -
Gametogenesis and Inter-Annual Variability in the Spawning Pattern of Acropora Hyacinthus in Northwestern Philippines Emmeline A
Zoological Studies 57: 46 (2018) doi:10.6620/ZS.2018.57-46 Open Access Gametogenesis and Inter-annual Variability in the Spawning Pattern of Acropora hyacinthus in Northwestern Philippines Emmeline A. Jamodiong1,*, Elizaldy A. Maboloc1,2, Ronald D. Villanueva1, and Patrick C. Cabaitan1 1The Marine Science Institute, College of Science, University of the Philippines, Diliman, 1101 Quezon City, Philippines. E-mail: [email protected] (Maboloc); [email protected] (Villanueva); [email protected] (Cabaitan) 2Present address: Department of Ocean Science, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, SAR, China (Received 29 March 2018; Accepted 16 August 2018; Published 21 September 2018; Communicated by Yoko Nozawa) Citation: Jamodiong EA, Maboloc EA, Villanueva RD, Cabaitan PC. 2018. Gametogenesis and inter-annual variability in the spawning pattern of Acropora hyacinthus in northwestern Philippines. Zool Stud 57:46. doi:10.6620/ZS.2018.57-46. Emmeline A. Jamodiong, Elizaldy A. Maboloc, Ronald D. Villanueva, and Patrick C. Cabaitan (2018) Acropora hyacinthus is a fast-growing tabular coral that dominates the shallow water coral assemblage in the Magsaysay reef at the Bolinao-Anda Reef Complex (BARC), northwestern Philippines. The timing of gamete development was investigated for A. hyacinthus through dissection and histological analyses of coral fragments that were collected monthly from February 2014 to April 2015 from the 22 tagged colonies. The spawning time was identified by the presence of oocytes in the sampled A. hyacinthus colonies through rapid sampling from January to March 2014, 2015 and 2016. Results show that A. hyacinthus is a hermaphroditic broadcast spawning coral with an annual gametogenic cycle. -
Description of Key Species Groups in the East Marine Region
Australian Museum Description of Key Species Groups in the East Marine Region Final Report – September 2007 1 Table of Contents Acronyms........................................................................................................................................ 3 List of Images ................................................................................................................................. 4 Acknowledgements ....................................................................................................................... 5 1 Introduction............................................................................................................................ 6 2 Corals (Scleractinia)............................................................................................................ 12 3 Crustacea ............................................................................................................................. 24 4 Demersal Teleost Fish ........................................................................................................ 54 5 Echinodermata..................................................................................................................... 66 6 Marine Snakes ..................................................................................................................... 80 7 Marine Turtles...................................................................................................................... 95 8 Molluscs ............................................................................................................................ -
Species Richness and Relative Abundance of Reef-Building Corals in the Indo-West Pacific
diversity Article Species Richness and Relative Abundance of Reef-Building Corals in the Indo-West Pacific Lyndon DeVantier * and Emre Turak Coral Reef Research, 10 Benalla Rd., Oak Valley, Townsville 4810, QLD, Australia; [email protected] * Correspondence: [email protected] Received: 5 May 2017; Accepted: 27 June 2017; Published: 29 June 2017 Abstract: Scleractinian corals, the main framework builders of coral reefs, are in serious global decline, although there remains significant uncertainty as to the consequences for individual species and particular regions. We assessed coral species richness and ranked relative abundance across 3075 depth-stratified survey sites, each < 0.5 ha in area, using a standardized rapid assessment method, in 31 Indo-West Pacific (IWP) coral ecoregions (ERs), from 1994 to 2016. The ecoregions cover a significant proportion of the ranges of most IWP reef coral species, including main centres of diversity, providing a baseline (albeit a shifted one) of species abundance over a large area of highly endangered reef systems, facilitating study of future change. In all, 672 species were recorded. The richest sites and ERs were all located in the Coral Triangle. Local (site) richness peaked at 224 species in Halmahera ER (IWP mean 71 species Standard Deviation 38 species). Nineteen species occurred in more than half of all sites, all but one occurring in more than 90% of ERs. Representing 13 genera, these widespread species exhibit a broad range of life histories, indicating that no particular strategy, or taxonomic affiliation, conferred particular ecological advantage. For most other species, occurrence and abundance varied markedly among different ERs, some having pronounced “centres of abundance”. -
Tonga SUMA Report
BIOPHYSICALLY SPECIAL, UNIQUE MARINE AREAS OF TONGA EFFECTIVE MANAGEMENT Marine and coastal ecosystems of the Pacific Ocean provide benefits for all people in and beyond the region. To better understand and improve the effective management of these values on the ground, Pacific Island Countries are increasingly building institutional and personal capacities for Blue Planning. But there is no need to reinvent the wheel, when learning from experiences of centuries of traditional management in Pacific Island Countries. Coupled with scientific approaches these experiences can strengthen effective management of the region’s rich natural capital, if lessons learnt are shared. The MACBIO project collaborates with national and regional stakeholders towards documenting effective approaches to sustainable marine resource management and conservation. The project encourages and supports stakeholders to share tried and tested concepts and instruments more widely throughout partner countries and the Oceania region. This report outlines the process undertaken to define and describe the special, unique marine areas of Tonga. These special, unique marine areas provide an important input to decisions about, for example, permits, licences, EIAs and where to place different types of marine protected areas, locally managed marine areas and Community Conservation Areas in Tonga. For a copy of all reports and communication material please visit www.macbio-pacific.info. MARINE ECOSYSTEM MARINE SPATIAL PLANNING EFFECTIVE MANAGEMENT SERVICE VALUATION BIOPHYSICALLY SPECIAL, UNIQUE MARINE AREAS OF TONGA AUTHORS: Ceccarelli DM1, Wendt H2, Matoto AL3, Fonua E3, Fernandes L2 SUGGESTED CITATION: Ceccarelli DM, Wendt H, Matoto AL, Fonua E and Fernandes L (2017) Biophysically special, unique marine areas of Tonga. MACBIO (GIZ, IUCN, SPREP), Suva. -
30 Years of Research on Crown-Of-Thorns Starfish (1986-2016): Scientific Advances and Emerging Opportunities
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 22 August 2017 doi:10.20944/preprints201708.0076.v1 Peer-reviewed version available at Diversity 2017, 9, 41; doi:10.3390/d9040041 Review 30 Years of Research on Crown-of-thorns Starfish (1986-2016): Scientific Advances and Emerging Opportunities Morgan S. Pratchett 1,*, Ciemon F. Caballes 1, Jennifer C. Wilmes 1, Samuel Matthews 1, Camille Mellin 2,3, Hugh P. A. Sweatman 2, Lauren E. Nadler 1,4, Jon Brodie 1, Cassandra A. Thompson 1, Jessica Hoey 5, Arthur R. Bos 6, Maria Byrne 7, Vanessa Messmer 1, Sofia Valero-Fortunato 1, Carla C. M. Chen2, Alexander C. E. Buck1, Russell C. Babcock 8, Sven Uthicke 2 1 ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia; [email protected] (C.F.C.); [email protected] (J.C.W); [email protected] (S.M.); [email protected] (J.B.); [email protected] (C.A.T.); [email protected] (V.M.); [email protected] (S.V.-F.); [email protected] (A.C.E.B.) 2 Australian Institute of Marine Science, PMB No. 3, Townsville, QLD 4810, Australia; [email protected] (H.P.A.S.) ; [email protected] (C.C.M.C.); [email protected] (S.U.) 3 The Environment Institute and School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia ; [email protected] (C.M.) ; 4 Scripps Institution of Oceanography, UC San Diego, La Jolla, CA 92037, USA; [email protected] (L.E.N.); 5 Great Barrier Reef Marine Park Authority, -
Phylogenetics of Rare Acropora Species
Molecular phylogenetics of geographically restricted Acropora species: Implications for threatened species conservation Richards ZT1*, Miller DJ2 and Wallace CC3 1. Aquatic Zoology, Western Australian Museum, 49 Kew Street, Welshpool, WA, Australia, 6106. 2. ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia, 4814. 3. Museum of Tropical Queensland, 74 Flinders Street, Townsville, Australia, 4814. *Corresponding Author - [email protected] Abstract To better understand the underlying causes of rarity and extinction risk in Acropora (staghorn coral), we contrast the minimum divergence ages and nucleotide diversity of an array of species with different range sizes and categories of threatened status. Time-calibrated Bayesian analyses based upon concatenated nuclear and mitochondrial sequence data implied contemporary range size and vulnerability are liked to species age. However, contrary to the popular belief based upon morphological features that geographically restricted Acropora species evolved in the Plio- Pleistocene, the molecular phylogeny depicts some species restricted to the Indo-Australian Archipelago have greater antiquity, diverging in the Miocene. Species age is not related to range size as a simple positive linear function and interpreting the precise tempo of evolution in this genus is greatly complicated by morphological homoplasy and a sparse fossil record. Our phylogenetic reconstructions provide new examples of how morphology conceals cryptic evolutionary relationships in the genus Acropora, and offers limited support for the species groupings currently used in Acropora systematics. We hypothesize that in addition to age, other mechanisms (such as a reticulate ancestry) delimit the contemporary range of some Acropora species, as evidenced by the complex patterns of allele sharing and paraphyly we uncover. -
Genomic Variants Among Threatened Acropora Corals
bioRxiv preprint doi: https://doi.org/10.1101/349910; this version posted June 21, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Kitchen et al. 1 1 Genomic variants among threatened Acropora corals 2 3 Authors: S. A. Kitchen*†, A. Ratan*‡, O.C. Bedoya-Reina§**, R. Burhans††, N. D. Fogarty‡‡, W. 4 Miller††, I. B. Baums†§§ 5 * Authors contributed equally to the manuscript 6 Author Affiliations: 7 † 208 Mueller Lab, Biology Department, The Pennsylvania State University, University Park PA 8 16802 [email protected], [email protected] 9 ‡ Department of Public Health Sciences and Center for Public Health Genomics, University of 10 Virginia, Charlottesville VA 22908 [email protected] 11 § MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, 12 University of Oxford, South Parks Road, Oxford OX1 3PT, UK [email protected] 13 ** MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, The 14 University of Edinburgh, Western General Hospital, Crewe Road, Edinburgh, UK. 15 †† Centre for Comparative Genomics and Bioinformatics, Pennsylvania State University, 16 University Park, PA 16802, USA [email protected], [email protected] 17 ‡‡ Department of Marine and Environmental Sciences, Nova Southeastern University, Fort 18 Lauderdale, FL 33314, [email protected] 19 20 Data Accession numbers: NCBI SRA accession numbers are SRR7235977-SRR7236038. 21 1 bioRxiv preprint doi: https://doi.org/10.1101/349910; this version posted June 21, 2018. -
Title Many Records of Hermatypic Scleractinian Corals That
Many Records of Hermatypic Scleractinian Corals that Grew Title on Molluscan Shells Yamamoto, Taiji; Kubota, Shin; Sakai, Kazuhiko; Kurozumi, Author(s) Taiji; Ohta, Mitsuru; Tanase, Hidetomo PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1998), 38(3-4): 155-168 Issue Date 1998-12-25 URL http://hdl.handle.net/2433/176278 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University Pub!. Seto Mar. Bioi. Lab., 38(3/4): 155-168, 1998 Many Records of Hermatypic Scleractiniail Corals that Grew on Molluscan Shells TAIJI YAMAMOTo 1>, SHIN KusoTAo, KAZUHIKO SAKAr 2 >, TAIJI KuRozuMr3 >, MrTSURU 0HTA l) and HIDETOMO T ANASE l) l) Seto Marine Biological Laboratory, Kyoto University, Shirahama-cho, VVakayama 649-22ll,Japan l) Sesoko Station, Tropical Biosphere Research Center, University of the Ryukyus, Sesoko, Motobu-cho, Okinawa 905-0227, Japan J) Natural History Museum and Institute, Chiba, Aoba-cho, Chuo-ku, Chiba 260-8682, Japan Abstract Forty cases of hermatypic scleractinian corals colonizing molluscan shells were recorded. Forty-five colonies of the corals belonging to eight genera in six families grew on 40 shells belonging to 15 genera in 12 families. Forty colonies were found in Tanabe Bay and its vicinity, southwestern Kii Peninsula, Japan, and 10 colonies in coral reef regions in Okinawa, Palau and probably the Banda Sea and/or the Arafura Sea. Usually one colony, rarely two to four colonies of at least two species of corals, grew on a shell of three families of gastropods and nine families of bivalves. Although the shell surface is a suitable substratum for planula larvae to settle down, coral colonies can not grow to large sizes on the shells.