Heterochrony, Generic Distinction and Phylogeny in the Family Hydractiniidae (Hydrozoa: Cnidaria)
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Amaia Caro Aramendia
The genus Pyrenaearia (Gastropoda, Helicoidea): Molecular and Morphological Systematics, Biogeography and Population Dynamics Pyrenaearia generoa (Gastropoda, Helicoidea): Sistematika Molekularra eta Morfologikoa, Biogeografia eta Populazio Dinamika PhD thesis Vitoria-Gasteiz, 2019 Amaia Caro Aramendia The genus Pyrenaearia (Gastropoda, Helicoidea): Molecular and Morphological Systematics, Biogeography and Population Dynamics Pyrenaearia generoa (Gastropoda, Helicoidea): Sistematika Molekularra eta Morfologikoa, Biogeografia eta Populazio Dinamika A thesis submitted by Amaia Caro Aramendia for the degree of Doctor of Philosophy, under the supervision of Dr. Benjamín Juan Gómez-Moliner and Dr. María José Madeira University of the Basque Country, Vitoria-Gasteiz, 2019 Zoologia eta Animalia Biologia Zelulen Saila Dpto. Zoología y Biología Celular Animal (cc)2019 AMAIA CARO ARAMENDIA (cc by-nc-nd 4.0) Astiro igo, barraskilotxo Fuji mendia da hau! Kobayashi Issa-ren haikua To the little things that run the world Esker onak Acknowledgements Tesi bat ez da pertsona bakar batena, bidean zehar laguntzen duten pertsona guztiei esker sortutako lana da eta, beraz, lehen orriek haien laguntza eskertzeko izan behar dute: En primer lugar me gustaría agradecer a mis directores, Benjamín Gómez-Moliner y María José Madeira. A Benjamín, por darme la oportunidad de entrar en el grupo de investigación y confiar en que podría realizar esta tesis. Gracias por compartir tus extensos conocimientos y por descubrirme el mundo de la malacología, que sin duda no habría encontrado por mi cuenta y ha resultado de lo más interesante. A Marijo, porque desde el principio y hasta el final has estado siempre ahí para guiarme, animarme y para ayudarme en todo lo que hiciese falta pero, sobre todo, por mostrarme que es posible compaginar este trabajo con una vida fuera de él. -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans
biology Review Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans Maria Giovanna Parisi 1,* , Daniela Parrinello 1, Loredana Stabili 2 and Matteo Cammarata 1,* 1 Department of Earth and Marine Sciences, University of Palermo, 90128 Palermo, Italy; [email protected] 2 Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy; [email protected] * Correspondence: [email protected] (M.G.P.); [email protected] (M.C.) Received: 10 August 2020; Accepted: 4 September 2020; Published: 11 September 2020 Abstract: Anthozoa is the most specious class of the phylum Cnidaria that is phylogenetically basal within the Metazoa. It is an interesting group for studying the evolution of mutualisms and immunity, for despite their morphological simplicity, Anthozoans are unexpectedly immunologically complex, with large genomes and gene families similar to those of the Bilateria. Evidence indicates that the Anthozoan innate immune system is not only involved in the disruption of harmful microorganisms, but is also crucial in structuring tissue-associated microbial communities that are essential components of the cnidarian holobiont and useful to the animal’s health for several functions including metabolism, immune defense, development, and behavior. Here, we report on the current state of the art of Anthozoan immunity. Like other invertebrates, Anthozoans possess immune mechanisms based on self/non-self-recognition. Although lacking adaptive immunity, they use a diverse repertoire of immune receptor signaling pathways (PRRs) to recognize a broad array of conserved microorganism-associated molecular patterns (MAMP). The intracellular signaling cascades lead to gene transcription up to endpoints of release of molecules that kill the pathogens, defend the self by maintaining homeostasis, and modulate the wound repair process. -
Hydrozoan Insights in Animal Development and Evolution Lucas Leclère, Richard Copley, Tsuyoshi Momose, Evelyn Houliston
Hydrozoan insights in animal development and evolution Lucas Leclère, Richard Copley, Tsuyoshi Momose, Evelyn Houliston To cite this version: Lucas Leclère, Richard Copley, Tsuyoshi Momose, Evelyn Houliston. Hydrozoan insights in animal development and evolution. Current Opinion in Genetics and Development, Elsevier, 2016, Devel- opmental mechanisms, patterning and evolution, 39, pp.157-167. 10.1016/j.gde.2016.07.006. hal- 01470553 HAL Id: hal-01470553 https://hal.sorbonne-universite.fr/hal-01470553 Submitted on 17 Feb 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Current Opinion in Genetics and Development 2016, 39:157–167 http://dx.doi.org/10.1016/j.gde.2016.07.006 Hydrozoan insights in animal development and evolution Lucas Leclère, Richard R. Copley, Tsuyoshi Momose and Evelyn Houliston Sorbonne Universités, UPMC Univ Paris 06, CNRS, Laboratoire de Biologie du Développement de Villefranche‐sur‐mer (LBDV), 181 chemin du Lazaret, 06230 Villefranche‐sur‐mer, France. Corresponding author: Leclère, Lucas (leclere@obs‐vlfr.fr). Abstract The fresh water polyp Hydra provides textbook experimental demonstration of positional information gradients and regeneration processes. Developmental biologists are thus familiar with Hydra, but may not appreciate that it is a relatively simple member of the Hydrozoa, a group of mostly marine cnidarians with complex and diverse life cycles, exhibiting extensive phenotypic plasticity and regenerative capabilities. -
BIOL 4900 Honours Thesis Towards an Understanding of Shallow Water Marine Hydroids on Cape Breton Coastlines
BIOL 4900 Honours Thesis Towards an understanding of shallow water marine hydroids on Cape Breton coastlines Matthew S. A. Penney Cape Breton University Sydney, Nova Scotia April, 2017 Supervisor: Dr. Timothy A. Rawlings Towards an understanding of shallow water marine hydroids on Cape Breton coastlines Matthew Penney April 2017 A thesis submitted in partial fulfillment of the requirements for BIOL4900 in the Department of Biology, Cape Breton University, Sydney, Nova Scotia, Canada. The undersigned grants permission for the Cape Breton University Library to store and provide access to this thesis and for the Chair of the Department of Biology, upon request, to allow extensive copying of the material contained in this thesis, in whole or in part, for the purposes of teaching and research by faculty and students of Cape Breton University. Requests for permission to copy or make other use of the material contained in this thesis, in whole or in part, should be addressed to: Chair, Department of Biology Cape Breton University P.O. Box 5300 Sydney, NS B1P 6L2 Canada Student Signature: ________________________________ Date: _______________________ Table Of Contents Abstract ......................................................................................................................................................... 1 Introduction .................................................................................................................................................. 3 Materials & Methods ................................................................................................................................... -
Report on Hydrozoans (Cnidaria), Excluding Stylasteridae, from the Emperor Seamounts, Western North Pacific Ocean
Zootaxa 4950 (2): 201–247 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2021 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4950.2.1 http://zoobank.org/urn:lsid:zoobank.org:pub:AD59B8E8-FA00-41AD-8AC5-E61EEAEEB2B1 Report on hydrozoans (Cnidaria), excluding Stylasteridae, from the Emperor Seamounts, western North Pacific Ocean DALE R. CALDER1,2* & LES WATLING3 1Department of Natural History, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario, Canada M5S 2C6. 2Research Associate, Royal British Columbia Museum, 675 Belleville Street, Victoria, British Columbia, Canada V8W 9W2. 3School of Life Sciences, 216 Edmondson Hall, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA. [email protected]; https://orcid.org/0000-0002-6901-1168. *Corresponding author. [email protected]; https://orcid.org/0000-0002-7097-8763. Table of contents Abstract .................................................................................................202 Introduction .............................................................................................202 Materials and methods .....................................................................................203 Results .................................................................................................204 Systematic Account ........................................................................................204 Phylum Cnidaria Verrill, 1865 ...............................................................................204 -
(Cnidaria, Hydrozoa, Hydroidolina) from the West Coast of Sweden, with a Checklist of Species from the Region
Zootaxa 3171: 1–77 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Monograph ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) ZOOTAXA 3171 On a collection of hydroids (Cnidaria, Hydrozoa, Hydroidolina) from the west coast of Sweden, with a checklist of species from the region DALE R. CALDER Department of Natural History, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario, Canada M5S 2C6 E-mail: [email protected] Magnolia Press Auckland, New Zealand Accepted by A. Collins: 30 Nov. 2011; published: 24 Jan. 2012 Dale R. Calder On a collection of hydroids (Cnidaria, Hydrozoa, Hydroidolina) from the west coast of Sweden, with a checklist of species from the region (Zootaxa 3171) 77 pp.; 30 cm. 24 Jan. 2012 ISBN 978-1-86977-855-2 (paperback) ISBN 978-1-86977-856-9 (Online edition) FIRST PUBLISHED IN 2012 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2012 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to reproduce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) 2 · Zootaxa 3171 © 2012 Magnolia Press CALDER Table of contents Abstract . 4 Introduction . 4 Material and methods . -
Deep-Water Corals: an Overview with Special Reference to Diversity and Distribution of Deep-Water Scleractinian Corals
BULLETIN OF MARINE SCIENCE, 81(3): 311–322, 2007 DeeP-Water Corals: AN OVerView witH SPecial reference to DIVersitY and Distribution of DeeP-Water Scleractinian Corals Stephen D. Cairns ABSTRACT The polyphyletic termcoral is defined as those Cnidaria having continuous or dis- continuous calcium carbonate or horn-like skeletal elements. So defined, the group consists of seven taxa (Scleractinia, Antipatharia, Octocorallia, Stylasteridae, and Milleporidae, two zoanthids, and three calcified hydractiniids) constituting about 5080 species, 66% of which occur in water deeper than 50 m, i.e., deep water as defined in this paper. Although the number of newly described species of deep- water scleractinian corals appears to be increasing at an exponential rate, it is sug- gested that this rate will plateau in the near future. The majority of azooxanthellate Scleractinia is solitary in form, firmly attached to a substrate, most abundant at 200–1000 m, and consist of caryophylliids. Literature helpful for the identification of deep-water Scleractinia is listed according to 16 geographic regions of the world. A species diversity contour map is presented for the azooxanthellate scleractinian species, showing centers of high diversity in the Philippine region, the western At- lantic Antilles, and the northwest Indian Ocean, and is remarkably similar to high diversity regions for shallow-water zooxanthellate Scleractinia. As suggested for shallow-water corals, the cause for the high diversity of deep-water scleractinian diversity is thought to be the result of the availability of large contiguous stable substrate, in the case of deep-water corals at depths of 200–1000 m (the area effect), whereas regions of low biodiversity appear to be correlated with a shallow depth of the aragonite saturation horizon. -
Characterization of PIWI Stem Cells in Hydractinia
Provided by the author(s) and NUI Galway in accordance with publisher policies. Please cite the published version when available. Title Characterization of PIWI+ stem cells in Hydractinia Author(s) McMahon, Emma Publication Date 2018-02-23 Item record http://hdl.handle.net/10379/7174 Downloaded 2021-09-29T06:03:30Z Some rights reserved. For more information, please see the item record link above. Characterization of PIWI+ stem cells in Hydractinia A thesis submitted in partial fulfilment of the requirements of the National University of Ireland, Galway for the degree of Doctor of Philosophy Author: Emma McMahon Supervisor: Prof Uri Frank Discipline: Biochemistry Centre for Chromosome Biology, School of Natural Sciences, National University of Ireland Galway, Ireland Thesis submission: September 2017 Acknowledgements 1 List of Abbreviations 2 Abstract 4 Declaration 5 Chapter 1. Introduction 6 1.1 Cnidaria 6 1.1.1 Cnidarian model organisms 9 1.1.2 Hydractinia as a model organism 11 1.2. Stem cells 17 1.2.1 Stem cell potency 18 1.2.2 Maintenance of stemness 20 1.2.3 Advance in stem cell research 22 1.3 Argonaute Proteins 24 1.3.1 PIWI proteins 28 1.3.2 Known PIWI functions 29 1.3.3 PIWI-interacting RNAs 31 1.3.4 piRNA biogenesis and function 33 1.3.5 Ping Pong biogenesis 35 1.3.6 Non transposon functions of the PIWI-piRNA pathway 35 1.3.7 Piwi-piRNA pathway in Hydractinia 36 1.3.8 Current research in Piwi-piRNA 37 1.4 Hypothesis and aims of this project 39 Chapter 2. -
The Hydractinia Echinata Test-System. III: Structure-Toxicity Relationship Study of Some Azo-, Azo-Anilide, and Diazonium Salt Derivatives
Molecules 2014, 19, 9798-9817; doi:10.3390/molecules19079798 OPEN ACCESS molecules ISSN 1420-3049 www.mdpi.com/journal/molecules Article The Hydractinia echinata Test-System. III: Structure-Toxicity Relationship Study of Some Azo-, Azo-Anilide, and Diazonium Salt Derivatives Sergiu Adrian Chicu 1, Melania Munteanu 2,*, Ioana Cîtu 3,*, Codruta Şoica 4, Cristina Dehelean 4, Cristina Trandafirescu 4, Simona Funar-Timofei 1,†, Daniela Ionescu 4,† and Georgeta Maria Simu 4,† 1 Institute of Chemistry Timisoara of the Romanian Academy, B-dul Mihai Viteazul 24, RO-300223 Timişoara, Romania; E-Mails: [email protected] (S.A.C.); [email protected] (S.F.-T.) 2 Department of Clinical Laboratory and Sanitary Chemistry, “Vasile Goldis” University, 1 Feleacului Str., Arad 310396, Romania 3 Faculty of Medicine, “V. Babes” University of Medicine and Pharmacy, 2 Eftimie Murgu, 300041 Timisoara, Romania 4 Faculty of Pharmacy, “V. Babes” University of Medicine and Pharmacy, 2 Eftimie Murgu, 300041 Timisoara, Romania; E-Mails: [email protected] (C.S.); [email protected] (C.D.); [email protected] (C.T.); [email protected] (D.I.); [email protected] (G.M.S.) † These authors contributed equally to this work. * Authors to whom correspondence should be addressed; E-Mails: [email protected] (M.M.); [email protected] (I.C.). Received: 17 April 2014; in revised form: 29 June 2014 / Accepted: 3 July 2014 / Published: 8 July 2014 Abstract: Structure-toxicity relationships for a series of 75 azo and azo-anilide dyes and five diazonium salts were developed using Hydractinia echinata (H. echinata) as model species. -
Elizabeth Borda
ELIZABETH BORDA Department of Marine Biology, Texas A&M University at Galveston 200 Seawolf Parkway, Ocean and Coastal Studies Building, Galveston, TX 77553 Cell: 917-865-2496 Phone: 409-740-4542 Email: [email protected] https://sites.google.com/site/lizborda/ EDUCATION 2007 Ph.D., Biology City University of New York Graduate School and University Center (CUNY) 2007 1998 B.S., Biology State University of New York at Stony Brook 1998 APPOINTMENTS 2017 – Present Chair of Undergraduate Research Learning Commons, Texas A&M University Galveston Campus (TAMUG) 2015 – Present Lecturer Department of Marine Biology, Texas A&M University Galveston Campus 2008 – Present Research Associate Division of Invertebrate Zoology, American Museum of Natural History 2011 – 2015 Postdoctoral Research Associate Department of Marine Biology, Texas A&M University Galveston Campus 2010 – 2011 Encyclopedia of Life Rubenstein Fellow Marine Biology Research Division, Scripps Institution of Oceanography (UCSD) 2007 – 2010 National Science Foundation (NSF) Minority Postdoctoral Research Fellow Marine Biology Research Division, Scripps Institution of Oceanography (UCSD) Department of Biological Sciences, Auburn University 2002 – 2007 NSF Partnerships for Enhancing Expertise in Taxonomy Graduate Student Division of Invertebrate Zoology, American Museum of Natural History 2000 – 2002 Scientific Assistant Division of Invertebrate Zoology, American Museum of Natural History AWARDS AND HONORS 2016 – Present [coPI] Research Experiences for Undergraduates – Ocean and Coastal $390,259 Research Experiences for Undergraduates (OCEANUS). National Science Foundation [PI: Patrick Louchouarn] 2015 – Present Aggies Commit to Excellence Scholarship (ACES). Texas A&M University $90,000 Galveston Campus – Provost Office [$30,000 per academic year] 2015 – Present Texas A&M University System Louis Stokes Alliance for Minority $84,000 Participation (TAMUS LSAMP) – College Partner funding for Galveston Campus [~$26,000 per academic year] 2016 – 2017 [coPI] Student Incentive Payment Program Marketing Strategy.