AACR2006-1686P

Total Page:16

File Type:pdf, Size:1020Kb

AACR2006-1686P Funding Proteinases and Inflammation Network Group grant Kallikrein 14 Signalling through Proteinase-Activated Receptors CIHR operating grant 1,2 3,4 3,4 3,4 5 Alberta Heritage Foundation for Katerina Oikonomopoulou , Kristina K. Hansen , Mahmoud Saifeddine , Illa Tea , Patricia Andrade-Gordon , Medical Research Graeme S. Cottrell6, Nigel W. Bunnett6, Nathalie Vergnolle3, Eleftherios P. Diamandis1,2 and Morley D. Hollenberg3,4 NSERC / CRSNG 1Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto; 2Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Toronto; 3Department of Pharmacology & Therapeutics, and 4Department of Medicine, University of Calgary, Calgary; 5Johnson & Johnson Pharmaceutical Research and Development, Spring House, Pennsylvania, 6Departments of Surgery and Physiology, University of California, San Francisco Kallikrein 14 can selectively disarm PAR (lower concentrations), OVERVIEW Figure 1: Mechanism of PAR activation (activation by proteolysis) 2. Kallikrein 14 can selectively disarm PAR1 (lower concentrations), 2+ Proteinase-activated receptors (PARs): a family of G-protein coupled receptors activated by serine proteinase cleavage site whilst activating PARs 2 and 4; Ca in HEK cells proteinases via a proteolytically revealed ‘tethered ligand’ (Fig. 1). Four family members (Fig. 2); PARs N PAR disarming 1, 2 and 4 signal to cells. N PAR1 dis-arming1 vs. activation Selective activation of PAR4 vs. PARs 1, 2 Human kallikreins (hKs): A 15-member family of secreted serine proteinases implicated in tumour 1 cm Thrombin 1 cm 2 min 2 min TFLLR-NH2 progression and cell survival (Fig. 4). (selective desensitization hK14: a tryptic kallikrein; wide tissue distribution, implicated in breast and ovarian cancer (Fig. 5 and 6). of PAR1) The mechanism of kallikrein action is not yet known: Although some targets have been identified (e.g. extracellular matrix; pro-UPA), the mechanism whereby kallikreins regulate tissue function is not hK14, 5 U/ml AYPGKF-NH2 200 µM, selective known. SFLLR-NH2 desensitization of C C 200µM, selective PAR desensitization of 4 We hypothesized that hK14, as a prototype kallikrein, modulates cell survival and tumour growth by signalling hK14, PARs 1, 2 regulating (activating or inactivating/dis-arming) proteinase-activated receptor (PAR) signalling. PAR1 Main conclusions: hK14 activated PAR in cultured cells (Ca++ signalling) and caused PAR -mediated 2 2 Proteinase Figure 2: The PAR family Figure 3: response Ca % relaxation of rat and murine vascular tissue. In addition, hK14 had a dual action on PAR1, depending on cleavage/activation site the enzyme concentration (principally dis-arming). In human platelets, hK14 was able to cause 4 PARs are known in rodents and humans 2+ proteinase cleavage site Hirudin-like 3. Kallikrein 14 can cause platelet aggregation and Ca signalling aggregation by activating PAR4 whilst dis-arming PAR1. Major Activating Receptor Some Disarming proteinases binding domain proteinases through PAR4 in isolated platelets Significance of study: In the setting of human tumours, known to be platelet-rich, hK14 would trigger PAR : …ESKATNATLDPR SFLLRN PN DKYEPFWEDEEKNES … 1 100 platelet aggregation and the preferential release of platelet endostatin rather than VEGF via PAR (PNAS PAR1 Thrombin Trypsin, Cathepsin G Rat Platelet (PAR ) Human Platelet (PARs 1 and 4) signalling 4 PAR : …GTNRSSKGR SLIGKV DG… 4 2005;102(1):216-20). Also, by targeting PAR . and/or PAR , hK14 could participate in tumour growth and 2 Aggregation 2 4 PAR Trypsin, Tryptase Elastase 1 cm 2 PAR3: …NDTNNLAKPTLPIK TFRGAP PNS FEEEP FSALE… survival, as well as in the inflammatory responses during cancer progression. 2 min PAR4: …LPAPR GYPGQV CANDSDTLELPDSS… PAR3 Thrombin Cathepsin G Thrombin, 1 U/ml Figure 4: Human Kallikreins Tethered ligand Trypsin, 10 U/ml PAR4 Thrombin Unknown; Kallikreins ? Note: Hirudin-like binding domain hK14, 20 U/ml hK14, 20 U/ml Kallikrein locus Characteristics of the kallikrein family: 50 AYPGKF-NH2 unique to PAR1 (and PAR3) 200 µM, selective Steinhoff M. et al., Endocr Rev. 2005;26:1-43 hK6, 20 U/ml TFLLR-NH2 desensitization of ¾The largest cluster of continuous 10 µM, selective PAR proteinases of any kind hK5, 20 U/ml desensitization of 4 PAR1 ¾The largest group of serine proteinases Materials and Methods ¾Trypsin or Chymotrypsin-like activity Calcium signalling Bioassays ACPT KLK1 KLK15 KLK3 KLK2 KLK4 KLK5 KLK6 KLK7 KLK8 KLK9 KLK10 KLK11 KLK12 KLK13 KLK14 Sinclec-9 Fluo-3 Borgono CA. et al, Nat Rev Cancer. 2004;4:876-90 of lightMax Transmission % 0 4.8 4.6 6.2 5.8 5.8 4.4 9.5 10.5 6.5 5.7 7.1 5.4 5.3 5.8 5.4 ¾ Calcium signalling assay in human ¾ Aorta endothelium: Contraction / relaxation response Ca % 8.9 6.3 -O OO Borgono CA. et al, Mol Cancer Res. 2004;2:257-80 HEK cells (PARs 1 and 2 / PAR ) (PAR ) 4 Cl Cl 2 and rat KNRK (PAR2) 4. Kallikreins can cause aorta relaxation, 5. hK14 can cause ¾ Human (PAR1 and PAR4) and Rat (PAR4) 4. 5. prepro-hK14 2+ OCH2 CH2 O ¾ Method: Incubate cells with Ca N N ++ platelets: Aggregation / Ca assays mediated through PAR2 activation murine paw inflammation NC -O CCO- 18 6 227 251 aa indicator (Fluo-3) Æ examine for -O 2 C CO 2 - 2 2 27.5 kDa cross-desensitization of PARs, ¾ Inflammation Rat 0.6 signal upon secretion using PAR-activating peptides, agonists and antagonists: 0.5 Kawabata A. et al., JPET 1999;288: 358-70 peptide Figure 5: TFLLR-NH2 - selective desensitization of PAR1 Control Ach SFLLR-NH - selective desensitization of PARs 1, 2 0.4 2 Hollenberg MD. et al., Can J Physiol Pharmacol. 1997;75:832-41 response pro-hK14 Kallikreins are AYPGKF-NH - selective desensitization of PAR 0.3 18 N 6 227 C 2 4 Hollenberg MD. et al., Can J Physiol Pharmacol. 2001;79:439-42 1 g Trypsin and / or Thrombin 0.2 233 aa secreted enzymes Phenylephrine and Acetylcholine Vergnolle N. et al., Br J Pharmacol. 1999;127:1083-90 5 min Paw diameter (mm) 0.1 L-NAME - inhibitor of NOS-mediated aorta relaxation Mouse Paw diameter (mm) e.g. hK14 ∆ upon activation L-NAME 0.1mM, Inhibitor 0.0 activation 0.1 g of NOS-mediated relaxation in in Control Ach m peptide 5 min 0 m mature Results response Phenylephrine 1 µM 30 6 Time after intraplantar injections (min) (active) hK14 6 N 227 C Acetylcholine 10 µM Active hK14 (n=5) Heat-Inactivated hK14 (n=5) 227 aa 1. hK14 can cleave within synthetic PAR 1, 2 and 4 peptides hK14, 3 U/ml hK5, 5 U/ml hK6, 3 U/ml (designed based on the cleavage/activation motifs; Fig.3) Figure 6: Kallikrein expression Tissue Expression of Kallikreins (RT-PCR) Kallikreins and cancer Tethered ligand sequence Conclusions; Kallikreins can regulate PAR activity N Salivary glands CNS KLK1, KLK4, KLK5, KLK6, hK KLK1, KLK3, KLK2, KLK5, KLK6, Receptor Trypsin (3.5 U/ml) hK14 (4.3 U/ml) KLK7, KLK8, KLK9, KLKL10, ¾PSA/hK3 is utilized to monitor prostate N KLK7, KLK9, KLK10, KLK11, KLK12, KLK11, KLK12, KLK14 KLK13, KLK15 cancer patients hPAR NATLDPR / SFLLRNPNDKYE NATLDPR / SF / LLR / NPNDKYE Trachea 1 hK Thyroid KLK3, KLK5, KLK6, KLK9, KLK10, KLK11, KLK12, KLK13 KLK3, KLK2, KLK4, KLK5, KLK7, KLK11, ¾hK6 (Zyme / proteinase M / Neurosin), hK10 KLK12, KLK13, KLK14, KLK15 hPAR GTNRSSKGR / SLIGK / V / DGTSH VTGK / GVT GTNRSSKGR / SLIGK / VDGTSHVTGK / GVT Thymus Lung (NES1), hK11, hK8, hK5 and hK14 may 2 KLK5, KLK6, KLK7, KLK9, KLK3, KLK10, KLK11, KLK12, KLK13 hK KLK11, KLK12, KLK13, KLK14 PAR C N hK 2 Breast represent novel ovarian cancer biomarkers Kidney hPAR GDDSTPSILPAPR / GYPGQV G / DDSTPSILPAPR / GY / PGQV KLK1, KLK3, KLK2 KLK4, KLK5, KLK6 KLK7, 4 2+ KLK1, KLK6 KLK7, KLKL9, KLK10, KLK11, KLK12, KLK13, KLK14 Ca release KLK14, KLK15 ¾hK11 may represent a novel prostate cancer C Heart Vasorelaxation Colon KLK11, KLK13 rPAR2 GPNSKGR / SLIGRLDTPY / G / GC GPNSKGR / SLIGRLDTPY / GG / C KLK4, KLK10, KLK12, biomarker KLK13, KLK14, KLK15 Skin rPAR L / NESK / SPDKPNPR / GFPGKP LNESKSPDKPNPR / GFPGK / P PAR1 C Pancreas KLK5, KLK7, KLK8, KLK9, KLK11 Ovary ¾hK5 and hK14 may represent novel breast 4 KLK1, KLK10, KLK12 KLK7, KLK8, 2+ PAR4 KLK9, KLK10 cancer biomarkers Ca release Possible role in carcinogenesis: 2+ Uterus Ca release KLK1, KLK4, KLK6, KLK7, Testis Only the intact ligand sequences, that would remain tethered to the KLK10, KLK11, KLK12, KLK14 KLK1, KLK4, KLK5, KLK6, ¾hKs can cleave several pro-uPA, GFs and Human Platelet KLK7, KLK9, KLK10, ¾ Angiogenesis ¾ Tumour growth KLK12, KLK13, KLK15 receptor, would result in signalling. Other potential cleavage sites Aggregation Human and Rat Platelet Prostate ECM proteins KLK1, KLK3, KLK2, KLK4, KLK5, KLK9, Aggregation KLK10, KLK11, KLK12, KLK13, KLK15 would dis-arm the receptor, preventing receptor activation. Oikonomopoulou K. et al., Biol Chem 2006 ¾ Inflammation ¾ Tumour survival.
Recommended publications
  • To Study Mutant P53 Gain of Function, Various Tumor-Derived P53 Mutants
    Differential effects of mutant TAp63γ on transactivation of p53 and/or p63 responsive genes and their effects on global gene expression. A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science By Shama K Khokhar M.Sc., Bilaspur University, 2004 B.Sc., Bhopal University, 2002 2007 1 COPYRIGHT SHAMA K KHOKHAR 2007 2 WRIGHT STATE UNIVERSITY SCHOOL OF GRADUATE STUDIES Date of Defense: 12-03-07 I HEREBY RECOMMEND THAT THE THESIS PREPARED UNDER MY SUPERVISION BY SHAMA KHAN KHOKHAR ENTITLED Differential effects of mutant TAp63γ on transactivation of p53 and/or p63 responsive genes and their effects on global gene expression BE ACCEPTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF Master of Science Madhavi P. Kadakia, Ph.D. Thesis Director Daniel Organisciak , Ph.D. Department Chair Committee on Final Examination Madhavi P. Kadakia, Ph.D. Steven J. Berberich, Ph.D. Michael Leffak, Ph.D. Joseph F. Thomas, Jr., Ph.D. Dean, School of Graduate Studies 3 Abstract Khokhar, Shama K. M.S., Department of Biochemistry and Molecular Biology, Wright State University, 2007 Differential effect of TAp63γ mutants on transactivation of p53 and/or p63 responsive genes and their effects on global gene expression. p63, a member of the p53 gene family, known to play a role in development, has more recently also been implicated in cancer progression. Mice lacking p63 exhibit severe developmental defects such as limb truncations, abnormal skin, and absence of hair follicles, teeth, and mammary glands. Germline missense mutations of p63 have been shown to be responsible for several human developmental syndromes including SHFM, EEC and ADULT syndromes and are associated with anomalies in the development of organs of epithelial origin.
    [Show full text]
  • 4-6 Weeks Old Female C57BL/6 Mice Obtained from Jackson Labs Were Used for Cell Isolation
    Methods Mice: 4-6 weeks old female C57BL/6 mice obtained from Jackson labs were used for cell isolation. Female Foxp3-IRES-GFP reporter mice (1), backcrossed to B6/C57 background for 10 generations, were used for the isolation of naïve CD4 and naïve CD8 cells for the RNAseq experiments. The mice were housed in pathogen-free animal facility in the La Jolla Institute for Allergy and Immunology and were used according to protocols approved by the Institutional Animal Care and use Committee. Preparation of cells: Subsets of thymocytes were isolated by cell sorting as previously described (2), after cell surface staining using CD4 (GK1.5), CD8 (53-6.7), CD3ε (145- 2C11), CD24 (M1/69) (all from Biolegend). DP cells: CD4+CD8 int/hi; CD4 SP cells: CD4CD3 hi, CD24 int/lo; CD8 SP cells: CD8 int/hi CD4 CD3 hi, CD24 int/lo (Fig S2). Peripheral subsets were isolated after pooling spleen and lymph nodes. T cells were enriched by negative isolation using Dynabeads (Dynabeads untouched mouse T cells, 11413D, Invitrogen). After surface staining for CD4 (GK1.5), CD8 (53-6.7), CD62L (MEL-14), CD25 (PC61) and CD44 (IM7), naïve CD4+CD62L hiCD25-CD44lo and naïve CD8+CD62L hiCD25-CD44lo were obtained by sorting (BD FACS Aria). Additionally, for the RNAseq experiments, CD4 and CD8 naïve cells were isolated by sorting T cells from the Foxp3- IRES-GFP mice: CD4+CD62LhiCD25–CD44lo GFP(FOXP3)– and CD8+CD62LhiCD25– CD44lo GFP(FOXP3)– (antibodies were from Biolegend). In some cases, naïve CD4 cells were cultured in vitro under Th1 or Th2 polarizing conditions (3, 4).
    [Show full text]
  • Human Kallikrein Gene 11 (KLK11) Mrna Overexpression Is Associated with Poor Prognosis in Patients with Epithelial Ovarian Cancer
    2766 Vol. 10, 2766–2770, April 15, 2004 Clinical Cancer Research Human Kallikrein Gene 11 (KLK11) mRNA Overexpression Is Associated with Poor Prognosis in Patients with Epithelial Ovarian Cancer 0.0225 ؍ Kazushi Shigemasa,1 Lijun Gu,1 significantly associated with overall survival (P ؍ Hirotoshi Tanimoto,2 Timothy J. O’Brien,3 and and P 0.0202, respectively) after multivariate analysis. Conclusions: KLK11 expression may play an important Koso Ohama1 role in ovarian cancer development and act as an independ- 1 Department of Obstetrics and Gynecology, Hiroshima University ent prognostic marker in ovarian cancer patients. Graduate School of Biomedical Sciences, Hiroshima, Japan; 2Department of Gynecology, National Hiroshima Hospital, Higashi Hiroshima, Japan; and 3Departments of Biochemistry and Molecular INTRODUCTION Biology and Obstetrics and Gynecology, University of Arkansas for Serine proteases comprise a family of protein-degrading Medical Sciences, Little Rock, Arkansas enzymes that serve a variety of biological functions, including induction of blood coagulation, activation of growth and angio- ABSTRACT genic factors, and degradation of extracellular matrix compo- nents (1–4). Purpose: The purpose of this study was to examine The human kallikrein gene family, a subfamily of serine expression levels of the human tissue kallikrein 11 gene proteases, is located at the chromosomal locus 19q13.3-q13.4. (KLK11) in epithelial ovarian tumors and to identify the Until recently, this family was thought to include only three relationship between KLK11 expression and patient sur- genes, the pancreatic renal kallikrein gene (KLK1), the human vival. glandular kallikrein gene (KLK2), and KLK3, which encodes Experimental Design: KLK11 mRNA expression was prostate-specific antigen (hK3).
    [Show full text]
  • Identification of New Substrates and Physiological Relevance
    Université de Montréal The Multifaceted Proprotein Convertases PC7 and Furin: Identification of New Substrates and Physiological Relevance Par Stéphanie Duval Biologie Moléculaire, Faculté de médecine Thèse présentée en vue de l’obtention du grade de Philosophiae doctor (Ph.D) en Biologie moléculaire, option médecine cellulaire et moléculaire Avril 2020 © Stéphanie Duval, 2020 Résumé Les proprotéines convertases (PCs) sont responsables de la maturation de plusieurs protéines précurseurs et sont impliquées dans divers processus biologiques importants. Durant les 30 dernières années, plusieurs études sur les PCs se sont traduites en succès cliniques, toutefois les fonctions spécifiques de PC7 demeurent obscures. Afin de comprendre PC7 et d’identifier de nouveaux substrats, nous avons généré une analyse protéomique des protéines sécrétées dans les cellules HuH7. Cette analyse nous a permis d’identifier deux protéines transmembranaires de fonctions inconnues: CASC4 et GPP130/GOLIM4. Au cours de cette thèse, nous nous sommes aussi intéressé au rôle de PC7 dans les troubles comportementaux, grâce à un substrat connu, BDNF. Dans le chapitre premier, je présenterai une revue de la littérature portant entre autres sur les PCs. Dans le chapitre II, l’étude de CASC4 nous a permis de démontrer que cette protéine est clivée au site KR66↓NS par PC7 et Furin dans des compartiments cellulaires acides. Comme CASC4 a été rapporté dans des études de cancer du sein, nous avons généré des cellules MDA- MB-231 exprimant CASC4 de type sauvage et avons démontré une diminution significative de la migration et de l’invasion cellulaire. Ce phénotype est causé notamment par une augmentation du nombre de complexes d’adhésion focale et peut être contrecarré par la surexpression d’une protéine CASC4 mutante ayant un site de clivage optimale par PC7/Furin ou encore en exprimant une protéine contenant uniquement le domaine clivé N-terminal.
    [Show full text]
  • An Overview of the Kallikrein Gene Families in Humans and Other Species: Emerging Candidate Tumour Markers૾
    Clinical Biochemistry 36 (2003) 443–452 An overview of the kallikrein gene families in humans and other species: Emerging candidate tumour markers૾ George M. Yousefa,b, Eleftherios P. Diamandisa,b,* aDepartment of Pathology and Laboratory Medicine, Mount Sinai Hospital, Toronto, Ontario, Canada bDepartment of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario, Canada Abstract Kallikreins are serine proteases with diverse physiologic functions. They are represented by multigene families in many animal species, especially in rat and mouse. Recently, the human kallikrein gene family has been fully characterized and includes 15 members, tandemly localized on chromosome 19q13.4. A new definition has now been proposed for kallikreins, which is not based on function but, rather, on close proximity and structural similarities. In this review, we summarize available information about kallikreins in many animal species with special emphasis on human kallikreins. We discuss the common structural features of kallikreins at the DNA, mRNA and protein levels and overview their evolutionary history. Kallikreins are expressed in a wide range of tissues including the salivary gland, endocrine or endocrine-related tissues such as testis, prostate, breast and endometrium and in the central nervous system. Most, if not all, genes are under steroid hormone regulation. Accumulating evidence indicates that kallikreins are involved in many pathologic conditions. Of special interest is the potential role of kallikreins in the central nervous system. In addition, many kallikreins seem to be candidate tumor markers for many malignancies, especially those of endocrine-related organs. © 2003 The Canadian Society of Clinical Chemists. All rights reserved. Keywords: Kallikrein; Tumor markers; Cancer biomarkers; Prostate cancer; Breast cancer; Ovarian cancer; Alzheimer’s disease; Serine proteases; Chromosome 19; Kallikrein evolution; Rodent kallikreins; Hormonally regulated genes 1.
    [Show full text]
  • Depletion of the Third Complement Component Ameliorates Age- Dependent Oxidative Stress and Positively Modulates Autophagic Activity in Aged Retinas in a Mouse Model
    Hindawi Oxidative Medicine and Cellular Longevity Volume 2017, Article ID 5306790, 17 pages https://doi.org/10.1155/2017/5306790 Research Article Depletion of the Third Complement Component Ameliorates Age- Dependent Oxidative Stress and Positively Modulates Autophagic Activity in Aged Retinas in a Mouse Model 1 1 1 1 Dorota Rogińska, Miłosz P. Kawa, Ewa Pius-Sadowska, Renata Lejkowska, 1 2 3,4 3,4 Karolina Łuczkowska, Barbara Wiszniewska, Kai Kaarniranta, Jussi J. Paterno, 5 1 2,6 Christian A. Schmidt, Bogusław Machaliński, and Anna Machalińska 1Department of General Pathology, Pomeranian Medical University, Al. Powstancow Wlkp. 72, 70-111 Szczecin, Poland 2Department of Histology and Embryology, Pomeranian Medical University, Al. Powstancow Wlkp. 72, 70-111 Szczecin, Poland 3Department of Ophthalmology, Institute of Clinical Medicine, University of Eastern Finland, 70211 Kuopio, Finland 4Department of Ophthalmology, Kuopio University Hospital, 70211 Kuopio, Finland 5Clinic for Internal Medicine C, University of Greifswald, 17475 Greifswald, Germany 6Department of Ophthalmology, Pomeranian Medical University, Al. Powstancow Wlkp. 72, 70-111 Szczecin, Poland Correspondence should be addressed to Anna Machalińska; [email protected] Received 25 April 2017; Revised 28 June 2017; Accepted 9 July 2017; Published 8 August 2017 Academic Editor: Kota V. Ramana Copyright © 2017 Dorota Rogińska et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The aim of the study was to investigate the influence of complement component C3 global depletion on the biological structure and function of the aged retina. In vivo morphology (OCT), electrophysiological function (ERG), and the expression of selected oxidative stress-, apoptosis-, and autophagy-related proteins were assessed in retinas of 12-month-old C3-deficient and WT mice.
    [Show full text]
  • Downloaded from Genomic Data Common Website (GDC at Accessed on 2019)
    G C A T T A C G G C A T genes Article Molecular Pathways Associated with Kallikrein 6 Overexpression in Colorectal Cancer Ritu Pandey 1,2,*, Muhan Zhou 3, Yuliang Chen 3, Dalila Darmoul 4 , Conner C. Kisiel 2, Valentine N. Nfonsam 5 and Natalia A. Ignatenko 1,2 1 Department of Cellular and Molecular Medicine, University of Arizona, Tucson, AZ 85721, USA; [email protected] 2 University of Arizona Cancer Center, University of Arizona, Tucson, AZ 85724, USA; [email protected] 3 Bioinformatics Shared Resource, University of Arizona Cancer Center, Tucson, AZ 85724, USA; [email protected] (M.Z.); [email protected] (Y.C.) 4 Institut National de la Santé et de la Recherche Médicale (INSERM), Université de Paris, Lariboisière Hospital, 75010 Paris, France; [email protected] 5 Department of Surgery, Section of Surgical Oncology, University of Arizona, Tucson, AZ 85724, USA; [email protected] * Correspondence: [email protected] Abstract: Colorectal cancer (CRC) remains one of the leading causes of cancer-related death world- wide. The high mortality of CRC is related to its ability to metastasize to distant organs. The kallikrein-related peptidase Kallikrein 6 (KLK6) is overexpressed in CRC and contributes to cancer cell invasion and metastasis. The goal of this study was to identify KLK6-associated markers for the CRC prognosis and treatment. Tumor Samples from the CRC patients with significantly elevated Citation: Pandey, R.; Zhou, M.; Chen, KLK6 transcript levels were identified in the RNA-Seq data from Cancer Genome Atlas (TCGA) Y.; Darmoul, D.; Kisiel, C.C.; and their expression profiles were evaluated using Gene Ontology (GO), Phenotype and Reactome Nfonsam, V.N.; Ignatenko, N.A.
    [Show full text]
  • Kallikrein 13: a New Player in Coronaviral Infections
    bioRxiv preprint doi: https://doi.org/10.1101/2020.03.01.971499; this version posted March 2, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Kallikrein 13: a new player in coronaviral infections. 2 3 Aleksandra Milewska1,2, Katherine Falkowski2, Magdalena Kalinska3, Ewa Bielecka3, 4 Antonina Naskalska1, Pawel Mak4, Adam Lesner5, Marek Ochman6, Maciej Urlik6, Jan 5 Potempa2,7, Tomasz Kantyka3,8, Krzysztof Pyrc1,* 6 7 1 Virogenetics Laboratory of Virology, Malopolska Centre of Biotechnology, Jagiellonian 8 University, Gronostajowa 7a, 30-387 Krakow, Poland. 9 2 Microbiology Department, Faculty of Biochemistry, Biophysics and Biotechnology, 10 Jagiellonian University, Gronostajowa 7, 30-387 Krakow, Poland. 11 3 Laboratory of Proteolysis and Post-translational Modification of Proteins, Malopolska 12 Centre of Biotechnology, Jagiellonian University, Gronostajowa 7a, 30-387 Krakow, 13 Poland. 14 4 Department of Analytical Biochemistry, Faculty of Biochemistry, Biophysics and 15 Biotechnology, Jagiellonian University, Gronostajowa 7 St., 30-387, Krakow, Poland. 16 5 University of Gdansk, Faculty of Chemistry, Wita Stwosza 63, 80-308 Gdansk, Poland. 17 6 Department of Cardiac, Vascular and Endovascular Surgery and Transplantology, Medical 18 University of Silesia in Katowice, Silesian Centre for Heart Diseases, Zabrze, Poland. 19 7 Centre for Oral Health and Systemic Diseases, University of Louisville School of Dentistry, 20 Louisville, KY 40202, USA. 21 8 Broegelmann Research Laboratory, Department of Clinical Science, University of Bergen, 22 5020 Bergen, Norway 23 24 25 26 27 28 29 30 31 * Correspondence should be addressed to Krzysztof Pyrc ([email protected]), Virogenetics 32 Laboratory of Virology, Malopolska Centre of Biotechnology, Jagiellonian University, 33 Gronostajowa 7, 30-387 Krakow, Poland; Phone number: +48 12 664 61 21; www: 34 http://virogenetics.info/.
    [Show full text]
  • Whole Exome Sequencing in Families at High Risk for Hodgkin Lymphoma: Identification of a Predisposing Mutation in the KDR Gene
    Hodgkin Lymphoma SUPPLEMENTARY APPENDIX Whole exome sequencing in families at high risk for Hodgkin lymphoma: identification of a predisposing mutation in the KDR gene Melissa Rotunno, 1 Mary L. McMaster, 1 Joseph Boland, 2 Sara Bass, 2 Xijun Zhang, 2 Laurie Burdett, 2 Belynda Hicks, 2 Sarangan Ravichandran, 3 Brian T. Luke, 3 Meredith Yeager, 2 Laura Fontaine, 4 Paula L. Hyland, 1 Alisa M. Goldstein, 1 NCI DCEG Cancer Sequencing Working Group, NCI DCEG Cancer Genomics Research Laboratory, Stephen J. Chanock, 5 Neil E. Caporaso, 1 Margaret A. Tucker, 6 and Lynn R. Goldin 1 1Genetic Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD; 2Cancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD; 3Ad - vanced Biomedical Computing Center, Leidos Biomedical Research Inc.; Frederick National Laboratory for Cancer Research, Frederick, MD; 4Westat, Inc., Rockville MD; 5Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD; and 6Human Genetics Program, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD, USA ©2016 Ferrata Storti Foundation. This is an open-access paper. doi:10.3324/haematol.2015.135475 Received: August 19, 2015. Accepted: January 7, 2016. Pre-published: June 13, 2016. Correspondence: [email protected] Supplemental Author Information: NCI DCEG Cancer Sequencing Working Group: Mark H. Greene, Allan Hildesheim, Nan Hu, Maria Theresa Landi, Jennifer Loud, Phuong Mai, Lisa Mirabello, Lindsay Morton, Dilys Parry, Anand Pathak, Douglas R. Stewart, Philip R. Taylor, Geoffrey S. Tobias, Xiaohong R. Yang, Guoqin Yu NCI DCEG Cancer Genomics Research Laboratory: Salma Chowdhury, Michael Cullen, Casey Dagnall, Herbert Higson, Amy A.
    [Show full text]
  • Solenodon Genome Reveals Convergent Evolution of Venom in Eulipotyphlan Mammals
    Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals Nicholas R. Casewella,1, Daniel Petrasb,c, Daren C. Cardd,e,f, Vivek Suranseg, Alexis M. Mychajliwh,i,j, David Richardsk,l, Ivan Koludarovm, Laura-Oana Albulescua, Julien Slagboomn, Benjamin-Florian Hempelb, Neville M. Ngumk, Rosalind J. Kennerleyo, Jorge L. Broccap, Gareth Whiteleya, Robert A. Harrisona, Fiona M. S. Boltona, Jordan Debonoq, Freek J. Vonkr, Jessica Alföldis, Jeremy Johnsons, Elinor K. Karlssons,t, Kerstin Lindblad-Tohs,u, Ian R. Mellork, Roderich D. Süssmuthb, Bryan G. Fryq, Sanjaya Kuruppuv,w, Wayne C. Hodgsonv, Jeroen Kooln, Todd A. Castoed, Ian Barnesx, Kartik Sunagarg, Eivind A. B. Undheimy,z,aa, and Samuel T. Turveybb aCentre for Snakebite Research & Interventions, Liverpool School of Tropical Medicine, Pembroke Place, L3 5QA Liverpool, United Kingdom; bInstitut für Chemie, Technische Universität Berlin, 10623 Berlin, Germany; cCollaborative Mass Spectrometry Innovation Center, University of California, San Diego, La Jolla, CA 92093; dDepartment of Biology, University of Texas at Arlington, Arlington, TX 76010; eDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; fMuseum of Comparative Zoology, Harvard University, Cambridge, MA 02138; gEvolutionary Venomics Lab, Centre for Ecological Sciences, Indian Institute of Science, 560012 Bangalore, India; hDepartment of Biology, Stanford University, Stanford, CA 94305; iDepartment of Rancho La Brea, Natural History Museum of Los Angeles County, Los Angeles,
    [Show full text]
  • Aberrant Human Tissue Kallikrein Levels in the Stratum Corneum and Serum of Patients with Psoriasis: Dependence on Phenotype, Severity and Therapy N
    CLINICAL AND LABORATORY INVESTIGATIONS DOI 10.1111/j.1365-2133.2006.07743.x Aberrant human tissue kallikrein levels in the stratum corneum and serum of patients with psoriasis: dependence on phenotype, severity and therapy N. Komatsu,* à K. Saijoh,§ C. Kuk,* F. Shirasaki,à K. Takeharaà and E.P. Diamandis* *Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario M5G 1L5, Canada àDepartment of Dermatology and §Department of Hygiene, Graduate School of Medical Science, School of Medicine, Kanazawa University, Kanazawa, Japan Summary Correspondence Background Human tissue kallikreins (KLKs) are a family of 15 trypsin-like or Eleftherios P. Diamandis. chymotrypsin-like secreted serine proteases (KLK1–KLK15). Multiple KLKs have E-mail: [email protected] been quantitatively identified in normal stratum corneum (SC) and sweat as can- didate desquamation-related proteases. Accepted for publication 7 November 2006 Objectives To quantify KLK5, KLK6, KLK7, KLK8, KLK10, KLK11, KLK13 and KLK14 in the SC and serum of patients with psoriasis, and their variation Key words between lesional and nonlesional areas and with phenotype, therapy and severity. diagnostic marker, human kallikreins, psoriasis, The overall SC serine protease activities were also measured. serine proteases, stratum corneum, therapy Methods Enzyme-linked immunosorbent assays and enzymatic assays were used. Conflicts of interest Results The lesional SC of psoriasis generally contained significantly higher levels None declared. of all KLKs. KLK6, KLK10 and KLK13 levels were significantly elevated even in the nonlesional SC. The overall trypsin-like, plasmin-like and furin-like activities were significantly elevated in the lesional SC.
    [Show full text]
  • KLK15 Is a Prognostic Marker for Progression?
    IJC International Journal of Cancer KLK15 is a prognostic marker for progression-free survival in patients with radical prostatectomy Anja Rabien1, Florian R. Fritzsche2,3, Monika Jung1, Angelika To¨lle1, Eleftherios P. Diamandis4, Kurt Miller1, Klaus Jung1,5, Glen Kristiansen2,3y and Carsten Stephan1,3y 1 Department of Urology, Charite´ - Universita¨tsmedizin Berlin, Campus Charite´ Mitte, Berlin, Germany 2 Institute of Pathology, Charite´ - Universita¨tsmedizin Berlin, Campus Charite´ Mitte, Berlin, Germany 3 Institute of Pathology, Universita¨tsspital Zu¨rich, Zu¨rich, Switzerland 4 Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, and Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario, Canada 5 Berlin Institute for Urologic Research, Berlin, Germany In search of biomarkers for prostate cancer, we evaluated the expression of the human kallikrein-related peptidase KLK15 in samples of prostatic adenocarcinomas from radical prostatectomies. Twenty-five pairs of cancerous and adjacent normal prostatic tissue were selected by laser capture microdissection. The tissue was used for quantification of KLK15 mRNA by reverse-transcriptase polymerase chain reaction. Immunohistochemical expression of the KLK15 protein in 193 samples of prostatic adenocarcinoma was analysed in relation to clinicopathological parameters of the patients and disease progression. Expression of KLK15 correlated with the pathological tumour stage and Gleason score of the cases, both at mRNA and at protein level. While mRNA expression in the tumour was elevated, the protein level of KLK15 was reduced compared with adjacent normal tissue and to prostatic intraepithelial neoplasia. Univariate Kaplan-Meier analysis showed a significant association of dichotomised KLK15 levels with disease progression defined by prostate-specific antigen relapse (p 5 0.001).
    [Show full text]